Query 012024
Match_columns 472
No_of_seqs 218 out of 1459
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 20:07:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 2E-94 7E-99 765.5 46.7 447 2-466 47-543 (552)
2 3sqr_A Laccase; multicopper ox 100.0 6.6E-90 2.3E-94 726.1 41.7 420 2-464 111-564 (580)
3 1zpu_A Iron transport multicop 100.0 1E-89 3.5E-94 724.6 42.5 430 2-466 47-504 (534)
4 3t6v_A Laccase; beta barrel, o 100.0 1.7E-88 5.9E-93 707.3 40.9 423 2-465 48-492 (495)
5 3pxl_A Laccase; 4-copper prote 100.0 3.1E-88 1.1E-92 705.4 41.7 422 2-466 47-493 (499)
6 1v10_A Laccase; multicopper bl 100.0 4.4E-88 1.5E-92 711.2 39.0 426 2-467 68-514 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 1.5E-87 5.3E-92 704.7 38.2 422 2-467 47-493 (503)
8 2q9o_A Laccase-1; multicopper 100.0 2.8E-86 9.7E-91 702.5 39.3 428 2-465 80-544 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 3.3E-79 1.1E-83 632.0 30.0 352 2-442 60-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.6E-79 8.9E-84 633.6 28.0 358 2-445 63-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 3.8E-78 1.3E-82 635.4 33.7 372 2-445 82-477 (534)
12 3aw5_A Multicopper oxidase; be 100.0 4.8E-78 1.6E-82 623.3 27.9 360 2-442 51-448 (448)
13 2wsd_A Spore coat protein A; o 100.0 4.2E-77 1.4E-81 627.0 30.9 372 10-444 101-511 (513)
14 3zx1_A Oxidoreductase, putativ 100.0 1.9E-75 6.7E-80 605.2 31.5 360 2-443 95-481 (481)
15 3gyr_A PHS, phenoxazinone synt 100.0 1.7E-75 5.7E-80 630.6 31.7 387 10-446 127-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 4.8E-74 1.7E-78 594.5 27.1 366 2-441 61-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 1.7E-72 5.8E-77 597.0 35.4 383 11-444 128-592 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 1.9E-48 6.5E-53 439.3 30.7 339 2-378 108-488 (1065)
19 2r7e_A Coagulation factor VIII 100.0 1E-49 3.5E-54 433.0 15.2 199 2-209 88-313 (742)
20 2dv6_A Nitrite reductase; elec 100.0 1.4E-43 4.8E-48 367.5 24.3 354 2-445 68-435 (447)
21 3tas_A Small laccase, multi-co 100.0 1.4E-43 4.9E-48 349.5 19.3 105 345-459 178-285 (313)
22 3gdc_A Multicopper oxidase; be 100.0 2.4E-43 8.2E-48 344.0 17.6 204 2-443 79-288 (288)
23 3g5w_A Multicopper oxidase typ 100.0 1.1E-42 3.8E-47 343.5 20.8 220 2-228 47-278 (318)
24 3t9w_A Small laccase, multi-co 100.0 2.6E-43 8.8E-48 345.1 15.5 95 344-446 193-290 (299)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 7.2E-44 2.4E-48 402.1 12.6 373 9-446 649-1061(1065)
26 3kw8_A Laccase, putative coppe 100.0 1.3E-42 4.3E-47 336.9 19.1 97 343-447 170-269 (276)
27 2zwn_A Two-domain type laccase 100.0 4.2E-42 1.4E-46 342.9 22.3 220 2-228 48-279 (339)
28 3cg8_A Laccase; oxidoreductase 100.0 1.1E-39 3.9E-44 325.1 20.3 95 344-446 212-309 (343)
29 1kbv_A ANIA, major outer membr 100.0 2.2E-39 7.5E-44 321.7 19.4 210 2-228 83-309 (327)
30 2zoo_A Probable nitrite reduct 100.0 1.4E-36 4.9E-41 314.2 18.8 210 2-228 73-299 (442)
31 1sdd_B Coagulation factor V; c 100.0 4.5E-36 1.5E-40 324.1 17.3 216 2-226 82-327 (647)
32 1oe1_A Dissimilatory copper-co 100.0 2.7E-35 9.4E-40 293.8 14.0 215 2-228 78-320 (336)
33 1mzy_A Copper-containing nitri 100.0 2.1E-34 7.4E-39 286.9 18.9 215 3-228 78-320 (333)
34 1sdd_A Coagulation factor V; c 100.0 5.5E-36 1.9E-40 294.5 5.8 188 2-209 73-284 (306)
35 2bw4_A Copper-containing nitri 100.0 1.6E-34 5.5E-39 288.7 12.4 215 2-228 84-326 (340)
36 2r7e_B Coagulation factor VIII 100.0 5.4E-34 1.9E-38 310.1 9.1 199 2-209 212-440 (770)
37 2dv6_A Nitrite reductase; elec 100.0 8.2E-31 2.8E-35 271.5 22.0 208 2-228 208-435 (447)
38 2r7e_A Coagulation factor VIII 100.0 5E-32 1.7E-36 294.3 5.6 195 2-210 465-696 (742)
39 2zwn_A Two-domain type laccase 100.0 1.1E-28 3.9E-33 245.8 16.4 245 120-444 23-278 (339)
40 3g5w_A Multicopper oxidase typ 100.0 6.2E-28 2.1E-32 238.0 15.2 246 121-444 23-277 (318)
41 1sdd_A Coagulation factor V; c 99.9 6.7E-24 2.3E-28 208.3 3.2 232 123-444 52-301 (306)
42 1sdd_B Coagulation factor V; c 99.9 3.2E-21 1.1E-25 208.0 18.8 242 130-443 67-327 (647)
43 1kbv_A ANIA, major outer membr 99.9 1.6E-20 5.3E-25 186.1 18.8 245 121-444 59-308 (327)
44 2bw4_A Copper-containing nitri 99.9 1.2E-20 4.1E-25 188.2 17.9 257 120-445 59-326 (340)
45 1mzy_A Copper-containing nitri 99.8 6.3E-19 2.1E-23 175.2 20.9 260 120-445 52-320 (333)
46 2r7e_B Coagulation factor VIII 99.8 3.2E-21 1.1E-25 209.8 4.1 243 131-442 198-455 (770)
47 2zoo_A Probable nitrite reduct 99.8 6.9E-18 2.3E-22 174.2 17.5 246 121-445 49-299 (442)
48 1oe1_A Dissimilatory copper-co 99.7 1.6E-16 5.4E-21 158.0 20.1 257 121-444 54-319 (336)
49 3cvb_A Plastocyanin; cupredoxi 99.4 9.2E-14 3.2E-18 113.8 1.7 74 2-77 30-105 (105)
50 2aan_A Auracyanin A; cupredoxi 99.2 8.9E-12 3E-16 107.4 6.5 93 342-441 36-138 (139)
51 3cvb_A Plastocyanin; cupredoxi 99.2 3.1E-11 1.1E-15 98.5 8.3 85 341-442 19-104 (105)
52 2xu9_A Laccase; oxidoreductase 99.1 9.1E-11 3.1E-15 120.6 9.1 225 121-429 36-266 (439)
53 3gdc_A Multicopper oxidase; be 99.1 2.4E-10 8.4E-15 110.7 10.5 87 342-445 67-156 (288)
54 1v10_A Laccase; multicopper bl 99.0 1.2E-08 4.2E-13 106.8 18.2 240 120-428 43-290 (521)
55 2gim_A Plastocyanin; beta shee 99.0 1.2E-09 4.3E-14 89.1 8.3 85 341-442 20-105 (106)
56 2uxt_A Protein SUFI, SUFI; oxi 99.0 2.8E-09 9.6E-14 109.7 12.1 230 119-429 37-272 (451)
57 3t6v_A Laccase; beta barrel, o 98.9 4.2E-08 1.4E-12 101.9 19.9 235 121-427 24-266 (495)
58 3pxl_A Laccase; 4-copper prote 98.9 3.6E-08 1.2E-12 102.5 19.2 233 121-427 23-263 (499)
59 1aoz_A Ascorbate oxidase; oxid 98.9 1.5E-08 5.1E-13 107.1 16.5 251 121-429 23-284 (552)
60 1hfu_A Laccase 1; oxidoreducta 98.9 3.4E-08 1.2E-12 103.0 17.4 232 121-428 24-263 (503)
61 3kw8_A Laccase, putative coppe 98.8 4E-09 1.4E-13 101.4 7.4 77 2-80 181-268 (276)
62 3tas_A Small laccase, multi-co 98.8 1.5E-08 5.3E-13 99.1 9.3 194 2-228 55-273 (313)
63 1qhq_A Protein (auracyanin); e 98.8 1.9E-08 6.5E-13 86.5 8.3 96 342-442 34-139 (140)
64 2plt_A Plastocyanin; electron 98.7 3.4E-08 1.2E-12 79.2 8.5 80 341-441 18-97 (98)
65 3sqr_A Laccase; multicopper ox 98.7 1.4E-07 4.7E-12 99.5 15.3 235 120-427 86-330 (580)
66 1pcs_A Plastocyanin; electron 98.7 1.5E-08 5.1E-13 81.4 6.0 79 341-441 19-97 (98)
67 2cal_A Rusticyanin; iron respi 98.7 9.8E-09 3.4E-13 89.6 4.9 70 3-76 75-154 (154)
68 2q9o_A Laccase-1; multicopper 98.7 1.9E-07 6.4E-12 98.6 14.8 231 121-427 56-292 (559)
69 2ov0_A Amicyanin; beta-sandwic 98.7 2.1E-08 7.3E-13 81.7 5.8 61 2-76 44-105 (105)
70 1bxv_A Plastocyanin; copper pr 98.6 8E-08 2.7E-12 75.8 8.3 72 341-441 19-90 (91)
71 1zpu_A Iron transport multicop 98.6 3.8E-07 1.3E-11 95.7 13.5 225 120-427 22-256 (534)
72 1b3i_A PETE protein, protein ( 98.6 8.7E-08 3E-12 76.7 6.4 77 342-441 20-96 (97)
73 3zx1_A Oxidoreductase, putativ 98.5 9E-07 3.1E-11 91.4 15.0 223 120-427 70-297 (481)
74 1iby_A Nitrosocyanin; RED copp 98.5 2.2E-07 7.6E-12 76.5 8.3 74 342-443 39-112 (112)
75 1byp_A Protein (plastocyanin); 98.5 3.6E-07 1.2E-11 73.3 8.8 82 341-441 17-98 (99)
76 3t9w_A Small laccase, multi-co 98.5 1.7E-07 5.9E-12 91.0 8.1 194 2-228 71-289 (299)
77 2gim_A Plastocyanin; beta shee 98.4 2.7E-07 9.3E-12 75.0 5.6 70 3-77 32-106 (106)
78 4hci_A Cupredoxin 1; structura 98.4 9.4E-07 3.2E-11 71.1 8.4 71 342-441 29-99 (100)
79 3aw5_A Multicopper oxidase; be 98.4 1.9E-06 6.5E-11 88.4 12.7 220 123-427 28-260 (448)
80 1iby_A Nitrosocyanin; RED copp 98.4 1.3E-07 4.6E-12 77.8 2.7 54 15-77 59-112 (112)
81 1kdj_A Plastocyanin; electron 98.4 8E-07 2.7E-11 71.7 7.3 84 341-441 17-101 (102)
82 3cg8_A Laccase; oxidoreductase 98.3 9.7E-07 3.3E-11 87.4 9.0 193 2-228 90-308 (343)
83 3abg_A Bilirubin oxidase; clea 98.2 9.8E-06 3.4E-10 84.9 14.4 218 121-419 58-288 (534)
84 2wsd_A Spore coat protein A; o 98.2 1.3E-05 4.4E-10 83.7 14.9 237 120-423 46-315 (513)
85 1plc_A Plastocyanin; electron 98.2 5.5E-06 1.9E-10 66.3 8.5 82 341-441 17-98 (99)
86 3od3_A Blue copper oxidase CUE 98.0 1.4E-05 4.9E-10 82.4 10.4 86 122-208 379-473 (488)
87 1fwx_A Nitrous oxide reductase 98.0 2.2E-06 7.6E-11 89.8 4.0 67 3-79 527-594 (595)
88 2ov0_A Amicyanin; beta-sandwic 98.0 1.7E-05 5.7E-10 64.3 7.4 71 342-441 34-104 (105)
89 2plt_A Plastocyanin; electron 97.9 5.3E-06 1.8E-10 66.2 3.5 67 3-76 30-98 (98)
90 2cal_A Rusticyanin; iron respi 97.9 3E-05 1E-09 67.4 7.9 82 342-441 62-153 (154)
91 1pcs_A Plastocyanin; electron 97.8 4.5E-06 1.5E-10 66.7 1.6 38 34-76 61-98 (98)
92 2g23_A PHS, phenoxazinone synt 97.8 6.1E-05 2.1E-09 79.8 10.5 88 121-209 459-575 (612)
93 1fwx_A Nitrous oxide reductase 97.8 4.9E-05 1.7E-09 79.6 9.6 75 341-444 513-593 (595)
94 2aan_A Auracyanin A; cupredoxi 97.8 1.8E-05 6E-10 67.6 5.2 40 35-76 100-139 (139)
95 1bxv_A Plastocyanin; copper pr 97.8 2.4E-05 8.4E-10 61.3 5.3 37 35-76 55-91 (91)
96 3erx_A Pseudoazurin; copper pr 97.7 6.9E-05 2.4E-09 62.4 6.7 39 35-78 57-95 (123)
97 3tu6_A Pseudoazurin (blue copp 97.6 8.1E-05 2.8E-09 62.3 5.9 40 35-79 59-98 (127)
98 1kdj_A Plastocyanin; electron 97.6 4.7E-05 1.6E-09 61.1 3.8 37 35-76 66-102 (102)
99 3ef4_A Pseudoazurin, blue copp 97.5 0.00015 5E-09 60.4 6.6 76 341-445 22-97 (124)
100 3ef4_A Pseudoazurin, blue copp 97.5 0.00014 4.9E-09 60.4 6.3 39 35-78 58-96 (124)
101 1byp_A Protein (plastocyanin); 97.5 0.00017 5.8E-09 57.4 6.2 37 35-76 63-99 (99)
102 1b3i_A PETE protein, protein ( 97.4 9E-05 3.1E-09 58.8 4.1 37 35-76 61-97 (97)
103 3tu6_A Pseudoazurin (blue copp 97.4 0.00024 8.1E-09 59.4 6.4 75 342-445 24-98 (127)
104 1iuz_A Plastocyanin; electron 97.4 0.0006 2.1E-08 54.1 8.6 80 341-441 18-97 (98)
105 1plc_A Plastocyanin; electron 97.4 0.00019 6.6E-09 57.1 5.6 37 35-76 63-99 (99)
106 1qhq_A Protein (auracyanin); e 97.4 0.00015 5.1E-09 61.8 5.0 43 34-77 98-140 (140)
107 3erx_A Pseudoazurin; copper pr 97.4 0.00036 1.2E-08 58.0 7.2 75 341-444 21-95 (123)
108 4hci_A Cupredoxin 1; structura 97.3 0.00018 6.3E-09 57.4 4.5 39 35-76 62-100 (100)
109 1id2_A Amicyanin; beta barrel, 97.2 0.0011 3.7E-08 53.5 7.6 71 342-441 35-105 (106)
110 1pmy_A Pseudoazurin; electron 97.1 0.00068 2.3E-08 56.4 6.2 38 36-78 58-95 (123)
111 3c75_A Amicyanin; copper prote 97.1 0.00067 2.3E-08 57.1 6.2 37 33-76 96-132 (132)
112 1paz_A Pseudoazurin precursor; 97.1 0.0008 2.7E-08 55.9 6.4 38 36-78 58-95 (123)
113 3c75_A Amicyanin; copper prote 97.0 0.0015 5.1E-08 55.0 7.4 71 342-441 61-131 (132)
114 1cuo_A Protein (azurin ISO-2); 96.9 0.00075 2.6E-08 56.5 4.5 42 35-77 86-129 (129)
115 1iuz_A Plastocyanin; electron 96.9 0.0009 3.1E-08 53.1 4.6 37 35-76 62-98 (98)
116 3ay2_A Lipid modified azurin p 96.8 0.00087 3E-08 58.6 4.2 42 35-77 125-167 (167)
117 1paz_A Pseudoazurin precursor; 96.7 0.0037 1.3E-07 51.8 7.3 74 342-444 22-95 (123)
118 2ux6_A Pseudoazurin; type-1 co 96.7 0.0028 9.5E-08 52.5 6.1 36 36-78 58-93 (122)
119 3gyr_A PHS, phenoxazinone synt 96.7 0.0075 2.6E-07 64.1 11.0 88 121-209 459-575 (612)
120 1pmy_A Pseudoazurin; electron 96.6 0.0037 1.3E-07 51.8 6.6 74 342-444 22-95 (123)
121 1id2_A Amicyanin; beta barrel, 96.5 0.0021 7E-08 51.8 4.4 35 35-76 72-106 (106)
122 2ccw_A Azurin II, AZN-2; elect 96.2 0.0048 1.6E-07 51.6 5.0 42 35-77 86-129 (129)
123 2iaa_C Azurin; quinoprotein, t 96.2 0.0044 1.5E-07 51.7 4.5 42 35-77 85-128 (128)
124 3sbq_A Nitrous-oxide reductase 96.2 0.015 5.2E-07 60.0 9.1 76 340-442 557-636 (638)
125 2cua_A Protein (CUA); CUA cent 96.1 0.022 7.4E-07 47.9 8.7 70 343-442 62-134 (135)
126 1nwp_A Azurin; electron transp 95.9 0.0066 2.3E-07 50.6 4.1 41 35-76 86-128 (128)
127 2ux6_A Pseudoazurin; type-1 co 95.8 0.021 7E-07 47.2 6.9 72 342-444 22-93 (122)
128 3ay2_A Lipid modified azurin p 95.6 0.042 1.4E-06 47.9 8.5 87 342-442 59-166 (167)
129 3s8f_B Cytochrome C oxidase su 95.2 0.081 2.8E-06 46.0 8.8 73 343-443 95-168 (168)
130 1cuo_A Protein (azurin ISO-2); 95.1 0.11 3.9E-06 43.1 9.3 87 342-442 19-128 (129)
131 3sbq_A Nitrous-oxide reductase 94.4 0.038 1.3E-06 57.1 5.3 43 35-78 595-638 (638)
132 3fsa_A Azurin; copper, cupredo 93.5 0.066 2.3E-06 44.1 4.3 38 35-76 86-125 (125)
133 2iaa_C Azurin; quinoprotein, t 93.5 0.21 7.1E-06 41.4 7.4 91 342-442 18-127 (128)
134 2ccw_A Azurin II, AZN-2; elect 93.5 0.41 1.4E-05 39.6 9.2 86 342-442 19-128 (129)
135 1nwp_A Azurin; electron transp 92.1 0.44 1.5E-05 39.4 7.4 92 342-441 19-127 (128)
136 3fsa_A Azurin; copper, cupredo 88.6 1.7 5.9E-05 35.6 7.9 88 341-441 18-124 (125)
137 2cua_A Protein (CUA); CUA cent 86.5 5.5 0.00019 33.0 10.1 61 131-210 59-119 (135)
138 3s8f_B Cytochrome C oxidase su 81.5 9.7 0.00033 32.8 9.7 61 131-210 92-152 (168)
139 1cyx_A CYOA; electron transpor 78.3 3.1 0.0001 37.1 5.6 74 341-442 41-115 (205)
140 3hb3_B Cytochrome C oxidase su 76.7 4.2 0.00014 38.6 6.4 77 341-445 189-266 (298)
141 3isy_A Bsupi, intracellular pr 74.1 23 0.0008 28.5 9.3 67 142-209 22-101 (120)
142 2gsm_B Cytochrome C oxidase su 70.5 7.1 0.00024 36.3 6.2 77 341-445 171-248 (262)
143 2r39_A FIXG-related protein; s 67.7 13 0.00043 29.8 6.5 47 140-196 33-81 (118)
144 1v54_B Cytochrome C oxidase po 61.0 11 0.00039 34.1 5.5 76 341-444 140-216 (227)
145 3isy_A Bsupi, intracellular pr 57.8 13 0.00043 30.1 4.6 60 1-60 24-100 (120)
146 1fft_B Ubiquinol oxidase; elec 43.6 14 0.00047 35.3 3.1 72 343-442 153-225 (315)
147 1cyx_A CYOA; electron transpor 41.6 1.2E+02 0.0041 26.8 8.7 61 133-212 42-102 (205)
148 2f1e_A Protein APAG; APAG prot 35.6 17 0.00057 29.7 2.0 29 26-54 66-96 (127)
149 1xwv_A DER F II; beta sheets, 31.4 27 0.00092 28.4 2.7 24 26-49 70-93 (129)
150 3uv0_A Mutator 2, isoform B; F 30.2 60 0.002 25.2 4.2 32 122-161 6-37 (102)
151 2wtp_A ORF131 protein, CZCE; m 29.7 15 0.00052 30.0 0.8 30 122-153 63-92 (131)
152 1nep_A EPV20, BNPC2, epididyma 28.3 33 0.0011 27.9 2.6 24 26-49 71-95 (130)
153 1xq4_A Protein APAG; all beta 27.8 44 0.0015 27.6 3.3 29 26-54 70-100 (139)
154 1x9u_A Umecyanin; cupredoxin, 26.1 56 0.0019 26.0 3.6 34 412-445 73-107 (116)
155 1xvs_A Protein APAG; MCSG APC2 25.8 49 0.0017 26.9 3.2 29 26-54 65-95 (126)
156 1tza_A APAG protein, SOR45; st 24.4 43 0.0015 27.5 2.7 29 26-54 65-95 (134)
157 1x9u_A Umecyanin; cupredoxin, 24.3 85 0.0029 24.9 4.3 35 44-79 72-107 (116)
158 2aqm_A Superoxide dismutase [C 23.3 35 0.0012 28.8 1.9 26 346-371 28-53 (154)
159 1eqw_A Cu,Zn superoxide dismut 22.7 35 0.0012 28.8 1.8 26 346-371 28-53 (156)
160 1eso_A SOD, Cu, Zn superoxide 22.4 36 0.0012 28.7 1.8 26 346-371 28-53 (154)
161 1oal_A Superoxide dismutase; o 22.0 37 0.0013 28.5 1.8 26 346-371 25-50 (151)
162 2gsm_B Cytochrome C oxidase su 21.5 3.2E+02 0.011 24.9 8.3 61 132-211 171-231 (262)
163 1jer_A Cucumber stellacyanin; 20.8 1.1E+02 0.0039 25.0 4.6 34 412-445 76-110 (138)
164 1ws8_A Mavicyanin; oxidized fo 20.8 84 0.0029 24.6 3.6 33 412-444 73-105 (109)
165 3hb3_B Cytochrome C oxidase su 20.7 3.8E+02 0.013 25.0 8.7 61 132-211 189-249 (298)
166 2r5o_A Putative ATP binding co 20.3 2.2E+02 0.0076 24.2 6.7 85 121-209 52-145 (188)
167 2aqp_A Superoxide dismutase [C 20.1 42 0.0015 28.6 1.8 26 346-371 37-62 (164)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2e-94 Score=765.45 Aligned_cols=447 Identities=28% Similarity=0.482 Sum_probs=351.1
Q ss_pred ccccccc-CCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCCC
Q 012024 2 SLTATSI-RSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRP 79 (472)
Q Consensus 2 ~~~n~l~-~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 79 (472)
-|+|.|. ++|||||||++|.+++||||+++ |||+|+||++|+|+|++ +++||||||||.+.|+++||+|+|||++++
T Consensus 47 ~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 47 ELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125 (552)
T ss_dssp EEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCT
T ss_pred EEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCc
Confidence 4799998 99999999999999999999999 99999999999999999 799999999999999999999999999986
Q ss_pred CCCCCCCCCCCccEEEEeccccCCHHHHHHHhhcC--CCCCCCCeEEECCCCCC-------------------------c
Q 012024 80 RIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKG--KKLPLPDGILINGRGSG-------------------------A 132 (472)
Q Consensus 80 ~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~d~~liNG~~~~-------------------------~ 132 (472)
..+.++ ..|+|++|+|+||++++...+...+... .....++++||||++.. +
T Consensus 126 ~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~ 204 (552)
T 1aoz_A 126 GKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPY 204 (552)
T ss_dssp TCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCC
T ss_pred ccCCCC-CCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCce
Confidence 544555 3468999999999999876655433332 22346789999999732 1
Q ss_pred eEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEe-CCCCCceEEEEeeee
Q 012024 133 AFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTA-DQPARDYYIVVSSRF 211 (472)
Q Consensus 133 ~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~-~~~~g~y~i~~~~~~ 211 (472)
+++|++|++|||||||+|..+.+.|+|+||+|+|||+||++++|..+++|.|+|||||||+|++ ++.+|+|||++....
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~ 284 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA 284 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc
Confidence 7999999999999999999999999999999999999999999999999999999999999999 556799999998764
Q ss_pred c-CCCCceEEEEEEeCCCCC--CCCCCCCCCC-ccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccc
Q 012024 212 T-STVLTTTGILHYSNSAGP--VSGPIPGGPT-VQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSA 287 (472)
Q Consensus 212 ~-~~~~~~~ail~y~~~~~~--~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 287 (472)
+ .......|+|+|.+.... ...+.|..|. .+...... ..+ ..+....+.+.| ...++++.+..+.
T Consensus 285 ~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~--~~l-~~l~~~~~~~~~--------~~~~~~~~l~~~~ 353 (552)
T 1aoz_A 285 RHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKN--FTY-RITAAMGSPKPP--------VKFNRRIFLLNTQ 353 (552)
T ss_dssp SCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHH--HHT-TCCBCTTCCCCC--------SSCSEEEEEEEEE
T ss_pred CCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccccccccc--ccc-cccccCCCCCCC--------CCCcEEEEEEEee
Confidence 3 234568899999876531 1112222221 11110000 000 011100011112 1356777665543
Q ss_pred cccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCC----------CCCCCCcccceeEEeecCCcEEEEEEEc
Q 012024 288 GQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISD----------NPTGGGIYQDTAVMGADYRAFIEIVFQN 357 (472)
Q Consensus 288 ~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~----------~p~~~~~~~~~~~~~~~~g~~ve~vi~N 357 (472)
...++...|+|||++|..++.|+|.+.+.++.+.|+.+.... .+.....+.++.++.++.|++|||+|+|
T Consensus 354 ~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N 433 (552)
T 1aoz_A 354 NVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQN 433 (552)
T ss_dssp EEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEE
T ss_pred ccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeC
Confidence 334566789999999998899998877666666554322111 1112244667888999999999999999
Q ss_pred CCC------CCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHH
Q 012024 358 DED------IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQ 431 (472)
Q Consensus 358 ~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~ 431 (472)
.+. +.||||||||+||||+++.|.|++.....+|+.+|+|||||.|+++||++|||+|||||.|+|||||++|+
T Consensus 434 ~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~ 513 (552)
T 1aoz_A 434 ANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHL 513 (552)
T ss_dssp CCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHH
T ss_pred CcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHh
Confidence 874 45999999999999999999988744457899999999999999999999999999999999999999999
Q ss_pred hcccEEEEEEecCCccccccCCCCccchhhccccC
Q 012024 432 YLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAG 466 (472)
Q Consensus 432 d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~ 466 (472)
+.|||++|.+... .+ +++|+++++||++++
T Consensus 514 ~~GM~~~~~~~~~--~~---~~~P~~~~~C~~~~~ 543 (552)
T 1aoz_A 514 HMGMGVVFAEGVE--KV---GRIPTKALACGGTAK 543 (552)
T ss_dssp HTTCEEEEEECGG--GC---CCCCHHHHSSHHHHH
T ss_pred hCCCeEEEEeCch--hh---ccCCcchhhhhccCc
Confidence 9999999987543 33 568999999998763
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=6.6e-90 Score=726.08 Aligned_cols=420 Identities=23% Similarity=0.339 Sum_probs=327.8
Q ss_pred ccccccc-CCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCCC
Q 012024 2 SLTATSI-RSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRP 79 (472)
Q Consensus 2 ~~~n~l~-~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 79 (472)
-|+|+|. ++|+|||||++|.+++||||+++ |||||+||++|+|+|++ .|+||||||||.+.|+++||+|+|||+++.
T Consensus 111 ~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 111 HVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 4799998 89999999999999999999999 99999999999999999 589999999999999999999999999875
Q ss_pred CCCCCCCCCCCcc-EEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCC----------------CceEEEeCCcEE
Q 012024 80 RIPVPFPDPAGDY-TVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS----------------GAAFNVEQGKTY 142 (472)
Q Consensus 80 ~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------------~~~~~v~~g~~~ 142 (472)
. .+ +|.|. +|+|+||+++...++...+..+ ..+.+|++||||++. .++++|++|++|
T Consensus 190 ~--~~---yD~d~~~l~l~Dw~~~~~~~~~~~~~~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~y 263 (580)
T 3sqr_A 190 T--AD---YDEDVGVIFLQDWAHESVFEIWDTARLG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKY 263 (580)
T ss_dssp S--SC---CSEEEEEEEEEEECSSCHHHHHHHHTTS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEE
T ss_pred c--CC---CCccceEEEEEEEecCCHHHHHHHHhcc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEE
Confidence 3 23 47787 9999999999887765444332 357889999999863 368999999999
Q ss_pred EEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecC----CCCce
Q 012024 143 RLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS----TVLTT 218 (472)
Q Consensus 143 rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~----~~~~~ 218 (472)
||||||+|..+.+.|+|+||+|+|||+||.+++|.++++|.|++||||||+|++++.+|+||||+...... .....
T Consensus 264 RlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~ 343 (580)
T 3sqr_A 264 RLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANA 343 (580)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGC
T ss_pred EEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCce
Confidence 99999999999999999999999999999999999999999999999999999998889999998765321 12367
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCccccccchhhccc-ccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEE
Q 012024 219 TGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSI-RSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYA 297 (472)
Q Consensus 219 ~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~-~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 297 (472)
+|||+|.++... .|..+..... ..+... ..+|.+..+.+.|. ....++++.+. .++...|+
T Consensus 344 ~aiL~Y~~~~~~----~P~~~~~~~~---~~~~~~~~~~L~P~~~~~~~~------~~~~~~~l~~~-----~~~~~~w~ 405 (580)
T 3sqr_A 344 TGILRYDSSSIA----NPTSVGTTPR---GTCEDEPVASLVPHLALDVGG------YSLVDEQVSSA-----FTNYFTWT 405 (580)
T ss_dssp EEEEESSTTCCC----CCCCCCCCCC---CCSCCSCGGGCCBSSCCBCCS------EEEEEEEEEEE-----ESSSEEEE
T ss_pred EEEEEECCCCCC----CCCCCCCCcc---chhhcccccccccCCCCCCCC------ccceEEEEEec-----cCCceeEE
Confidence 999999765421 1211110000 001110 02333333322221 11223333332 34567899
Q ss_pred EcCeecc-CCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeec----CCcEEEEEEEcCC--CCCCCeeecCC
Q 012024 298 INSVSFI-PADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD----YRAFIEIVFQNDE--DIIQSYHLNGY 370 (472)
Q Consensus 298 iNg~~f~-~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~g~~ve~vi~N~~--~~~HP~HlHG~ 370 (472)
|||++|. +++.|+|.+.+.+ . ...|. ..+++.++ .|++|||+|+|.+ .+.||||||||
T Consensus 406 iN~~s~~~~~~~P~L~~~~~g---~------~~~~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh 470 (580)
T 3sqr_A 406 INSSSLLLDWSSPTTLKIFNN---E------TIFPT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGH 470 (580)
T ss_dssp ETTBCCCCCTTSCHHHHHHTT---C------CCCCG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSC
T ss_pred ECCEecccCCCCCchhhhhcC---C------ccCCC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCc
Confidence 9999997 5788987654321 0 01121 23455554 6999999999988 78999999999
Q ss_pred ceEEEEeecCCCCCCC-CCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCcccc
Q 012024 371 QFWVVGMDGGQWTSAS-RNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLR 449 (472)
Q Consensus 371 ~F~Vl~~~~g~~~~~~-~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~ 449 (472)
+||||+++.|.|++.. ...+|+.||++||||.|+++||++|||++||||.|+|||||++|++.||+++|.+ .+++ ++
T Consensus 471 ~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~-i~ 548 (580)
T 3sqr_A 471 DFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSS-IA 548 (580)
T ss_dssp CEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGG-CC
T ss_pred eEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHH-Hh
Confidence 9999999999998654 3578999999999999999999999999999999999999999999999999976 3433 32
Q ss_pred ccC-CCCccc-hhhccc
Q 012024 450 DEY-PIPKNA-RLCGKA 464 (472)
Q Consensus 450 ~~~-~~p~~~-~~c~~~ 464 (472)
+. ++|++. ..|..+
T Consensus 549 -~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 549 -VKMTDTAIFEDTCANW 564 (580)
T ss_dssp -CCHHHHHHHHHHHHHH
T ss_pred -hccCCcHHHHHhhHHH
Confidence 23 366664 588654
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-89 Score=724.64 Aligned_cols=430 Identities=22% Similarity=0.297 Sum_probs=328.7
Q ss_pred ccccccc-CCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCCC
Q 012024 2 SLTATSI-RSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRP 79 (472)
Q Consensus 2 ~~~n~l~-~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 79 (472)
-|+|+|. ++|||||||++|.+++||||+++ |||||+||++|+|+|++++++||||||||.+.|+++||+|+|||+++.
T Consensus 47 ~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 47 YLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS 126 (534)
T ss_dssp EEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT
T ss_pred EEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC
Confidence 4799999 99999999999999999999999 999999999999999997799999999999999999999999999975
Q ss_pred CCCCCCCCCCCccEEEEeccccCCHHHHHHH-hhc---CCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcE
Q 012024 80 RIPVPFPDPAGDYTVLIGDWYKSNHTDLRAH-LDK---GKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSL 155 (472)
Q Consensus 80 ~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~-~~~---~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~ 155 (472)
+ |+ .+|+|++|+|+||+++...++... +.. ....+.++++||||+. .++++|++|++|||||||+|..+.+
T Consensus 127 ~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~ 201 (534)
T 1zpu_A 127 F---PY-DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQ 201 (534)
T ss_dssp C---CS-CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCE
T ss_pred C---CC-CCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCC-ceEEEEECCCEEEEEEEeccCCceE
Confidence 3 33 458899999999999988776543 221 2335678999999997 5899999999999999999999999
Q ss_pred eEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCC-CCceEEEEeeeec-------CCCCceEEEEEEeCC
Q 012024 156 NFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP-ARDYYIVVSSRFT-------STVLTTTGILHYSNS 227 (472)
Q Consensus 156 ~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~-~g~y~i~~~~~~~-------~~~~~~~ail~y~~~ 227 (472)
.|+|+||+|+|||+||++++|..+++|.|+|||||||+|++++. .++|||++..... .......++|+|.+.
T Consensus 202 ~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 281 (534)
T 1zpu_A 202 YFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKT 281 (534)
T ss_dssp EEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTT
T ss_pred EEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCC
Confidence 99999999999999999999999999999999999999999864 5789999875422 113456799999875
Q ss_pred CCCCCCCCCCCCC-ccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEeccccc-ccCCeEeEEEcCeeccC
Q 012024 228 AGPVSGPIPGGPT-VQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAG-QVNGKQRYAINSVSFIP 305 (472)
Q Consensus 228 ~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~iNg~~f~~ 305 (472)
... |..+. ..+...+. . ..+.+....+.+ ...++++.+..+.. ..++...|+|||++|..
T Consensus 282 ~~~-----p~~~~~~~~~~~~~---~--~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~ 343 (534)
T 1zpu_A 282 AAL-----PTQNYVDSIDNFLD---D--FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTA 343 (534)
T ss_dssp SCB-----CCCCCCSCSSCSCC---G--GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCC
T ss_pred CCC-----CCCCcccccccccc---c--ccceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccC
Confidence 421 11110 00000010 0 112222111111 13456666554321 12455679999999999
Q ss_pred CCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecC-----
Q 012024 306 ADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGG----- 380 (472)
Q Consensus 306 p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g----- 380 (472)
++.|+|.+.+.. +.+.. .+. ....++.++.++.|++|+|+|+|.+.+.||||||||+||||+++.+
T Consensus 344 ~~~P~L~~~~~~--~~~~~-----~~~--~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~ 414 (534)
T 1zpu_A 344 PKVPTLMTVLSS--GDQAN-----NSE--IYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDAL 414 (534)
T ss_dssp CSSCHHHHHTTS--GGGTT-----CGG--GGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGG
T ss_pred CCCCceeeeccc--CcccC-----CCc--ccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccc
Confidence 999987655421 11110 111 1122467788999999999999999899999999999999999864
Q ss_pred -----CCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCcccccc--CC
Q 012024 381 -----QWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDE--YP 453 (472)
Q Consensus 381 -----~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~--~~ 453 (472)
.|++..... ...+|+|||||.|++++|++|||++||||.|+|||||++|++.|||+.|.+. +++ ++.+ .+
T Consensus 415 ~G~p~~~~~~~~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~-~~~~~~~~ 491 (534)
T 1zpu_A 415 GEVPHSFDPDNHPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED-PFG-IQDAHSQQ 491 (534)
T ss_dssp TCCCCCCBTTBCCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC-HHH-HHHCGGGS
T ss_pred cCcccccCcccccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEEC-ccc-cccccccC
Confidence 444332222 3468999999999999999999999999999999999999999999999764 323 3332 46
Q ss_pred CCccchhhccccC
Q 012024 454 IPKNARLCGKAAG 466 (472)
Q Consensus 454 ~p~~~~~c~~~~~ 466 (472)
+|++...||...+
T Consensus 492 ~p~~~~~~C~~~~ 504 (534)
T 1zpu_A 492 LSENHLEVCQSCS 504 (534)
T ss_dssp CCHHHHHHHHHTT
T ss_pred CChhHhhhhhccC
Confidence 7776654444333
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.7e-88 Score=707.26 Aligned_cols=423 Identities=21% Similarity=0.326 Sum_probs=320.1
Q ss_pred cccccccC-----CeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEE
Q 012024 2 SLTATSIR-----SAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRI 75 (472)
Q Consensus 2 ~~~n~l~~-----~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 75 (472)
-|+|+|.+ +|||||||++|.+++||||+++ |||||+||++|+|+|++++++||||||||.+.|+++||+|+|||
T Consensus 48 ~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV 127 (495)
T 3t6v_A 48 VTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVV 127 (495)
T ss_dssp EEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEE
T ss_pred EEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEE
Confidence 47899985 7999999999999999999999 99999999999999999879999999999999999999999999
Q ss_pred eCCCCC-CCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCC---------CCceEEEeCCcEEEEE
Q 012024 76 LSRPRI-PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG---------SGAAFNVEQGKTYRLR 145 (472)
Q Consensus 76 ~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~---------~~~~~~v~~g~~~rlR 145 (472)
+++.+. ..+|+..++|++|+|+||+++....+ .+..+.++|++||||++ ..+.++|++|++||||
T Consensus 128 ~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-----~~~~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlR 202 (495)
T 3t6v_A 128 YDPNDPDANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMR 202 (495)
T ss_dssp ECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS-----CSSSCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEE
T ss_pred cCccccccccCCCCCceeEEEEecccCCchhhh-----ccCCCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEE
Confidence 986541 12343335678999999999876432 12234578999999985 2468999999999999
Q ss_pred EEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCCC---CceEEEE
Q 012024 146 ISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTV---LTTTGIL 222 (472)
Q Consensus 146 ~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~~---~~~~ail 222 (472)
|||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|+++++.|+|||++........ ....|+|
T Consensus 203 liN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail 282 (495)
T 3t6v_A 203 LVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAIL 282 (495)
T ss_dssp EEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEE
T ss_pred EEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEE
Confidence 9999999999999999999999999999999999999999999999999999878999999976432221 2357999
Q ss_pred EEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCee
Q 012024 223 HYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVS 302 (472)
Q Consensus 223 ~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~ 302 (472)
+|.+...... ....+. .. ...+ .+.+|.+......|.... . ...++++.+.... ++ ..|+|||++
T Consensus 283 ~Y~~~~~~~p--~~~~~~--~~--~~~~--~~~~L~p~~~~~~p~~~~-~--~~~d~~~~l~~~~---~~-~~w~iNg~s 347 (495)
T 3t6v_A 283 RYDGATTADP--VTVAST--VH--TKCL--IETDLHPLSRNGVPGNPH-Q--GGADCNLNLSLGF---AC-GNFVINGVS 347 (495)
T ss_dssp EETTSCSSCC--CCCCCS--SC--SSBC--CGGGCCBSSCCCCSSCSS-T--TCSSEEEECCEEE---ET-TEEEETTBC
T ss_pred EECCCCCCCC--CCCCCC--CC--cccc--ccccccccccccCCCccC-C--CCCcEEEEEEEEe---cC-cEEEEcCEe
Confidence 9987542111 100000 00 0000 011233322221121000 0 1245555554321 12 279999999
Q ss_pred ccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEE-cCCCCCCCeeecCCceEEEEeecCC
Q 012024 303 FIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQ-NDEDIIQSYHLNGYQFWVVGMDGGQ 381 (472)
Q Consensus 303 f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~-N~~~~~HP~HlHG~~F~Vl~~~~g~ 381 (472)
|..++.|+|.+.+. +.+... .......++.++.|++|||+|+ |...+.||||||||+|+||++++.
T Consensus 348 ~~~~~~P~L~~~~~---g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~- 414 (495)
T 3t6v_A 348 FTPPTVPVLLQICS---GANTAA---------DLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN- 414 (495)
T ss_dssp CCCCSSCHHHHHHT---TCCSST---------TSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-
T ss_pred cCCCCCcchhhhhc---CCcCcc---------cccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-
Confidence 99889998766542 221110 0111346789999999999998 677789999999999999987542
Q ss_pred CCCCCCCCCCcCCCCccceEEeCC-CCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCccccccCCCCcc-ch
Q 012024 382 WTSASRNQYNLRDAVARVTVQVYP-KSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN-AR 459 (472)
Q Consensus 382 ~~~~~~~~~n~~~p~~rDTv~vp~-~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~ 459 (472)
..+|+.||+|||||.|++ ++|++|||++||||.|+|||||++|++.|||++|. ..+++ ++...++|++ ..
T Consensus 415 ------~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~~~~-~~~~~~~p~~~~~ 486 (495)
T 3t6v_A 415 ------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFA-EDIPN-TASANPVPEAWSN 486 (495)
T ss_dssp ------CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEE-ETHHH-HHHHCCCCHHHHH
T ss_pred ------CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEE-EChhH-hccccCCCHHHHH
Confidence 347889999999999997 89999999999999999999999999999999984 34433 4323456766 45
Q ss_pred hhcccc
Q 012024 460 LCGKAA 465 (472)
Q Consensus 460 ~c~~~~ 465 (472)
.|..+.
T Consensus 487 ~C~~~~ 492 (495)
T 3t6v_A 487 LCPSYD 492 (495)
T ss_dssp HHHHHH
T ss_pred HhhHhh
Confidence 887653
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=3.1e-88 Score=705.36 Aligned_cols=422 Identities=23% Similarity=0.362 Sum_probs=320.7
Q ss_pred cccccccC-----CeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEE
Q 012024 2 SLTATSIR-----SAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRI 75 (472)
Q Consensus 2 ~~~n~l~~-----~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 75 (472)
-|+|+|.+ +|||||||++|.+++||||+++ |||||+||++|+|+|++++++||||||||.+.|+++||+|+|||
T Consensus 47 ~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV 126 (499)
T 3pxl_A 47 NVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126 (499)
T ss_dssp EEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEE
T ss_pred EEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEE
Confidence 47899985 7999999999999999999999 99999999999999999879999999999999999999999999
Q ss_pred eCCCCC-CCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCC--------CCceEEEeCCcEEEEEE
Q 012024 76 LSRPRI-PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG--------SGAAFNVEQGKTYRLRI 146 (472)
Q Consensus 76 ~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--------~~~~~~v~~g~~~rlR~ 146 (472)
+++.+. +.+|+..++|++|+|+||+++.... .+..+.++|++||||++ ..+.++|++|++|||||
T Consensus 127 ~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~------~~~~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRl 200 (499)
T 3pxl_A 127 YDPNDPHASRYDVDNDDTVITLADWYHTAAKL------GPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRL 200 (499)
T ss_dssp ECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEE
T ss_pred cCCcccccccCCCCCceEEEEEEcccCCcccc------ccCCCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEE
Confidence 986541 1234333567899999999986532 22334578999999985 24689999999999999
Q ss_pred EEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCCC---CceEEEEE
Q 012024 147 SNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTV---LTTTGILH 223 (472)
Q Consensus 147 in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~~---~~~~ail~ 223 (472)
||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++.+|+|||++........ ....|+|+
T Consensus 201 iNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~ 280 (499)
T 3pxl_A 201 VSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILR 280 (499)
T ss_dssp EECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEE
T ss_pred EecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEE
Confidence 999999999999999999999999999999999999999999999999999878999999876432221 23579999
Q ss_pred EeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCeec
Q 012024 224 YSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSF 303 (472)
Q Consensus 224 y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f 303 (472)
|.+............+... + .+.+|.+....+.|.... ....++++.+.... ++ ..|+|||++|
T Consensus 281 Y~~~~~~~p~~~~~~~~~~----~-----~~~~L~p~~~~~~p~~~~---~~~~d~~~~l~~~~---~~-~~w~iNg~s~ 344 (499)
T 3pxl_A 281 YDGAPAVEPTTNQTTSVKP----L-----NEVDLHPLVSTPVPGAPS---SGGVDKAINMAFNF---NG-SNFFINGASF 344 (499)
T ss_dssp ETTSCSSCCCCCCCCCSSB----C-----CGGGCCBSSCCCCSSCSS---TTCSSEEEECCEEE---CS-SCEEETTBCC
T ss_pred eCCCCCCCCCCCCCCCCcc----c-----ccccccccccccCCCccc---CCCCcEEEEEEEEe---cC-cEEEEcCEec
Confidence 9876421110000000000 0 011233332221221100 01345666554321 12 3799999999
Q ss_pred cCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEE---cCCCCCCCeeecCCceEEEEeecC
Q 012024 304 IPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQ---NDEDIIQSYHLNGYQFWVVGMDGG 380 (472)
Q Consensus 304 ~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~---N~~~~~HP~HlHG~~F~Vl~~~~g 380 (472)
..|+.|+|.+.+. +.+... .......++.++.|++|||+|+ |...+.||||||||+||||++++.
T Consensus 345 ~~~~~P~L~~~~~---g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g~ 412 (499)
T 3pxl_A 345 VPPTVPVLLQILS---GAQTAQ---------DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS 412 (499)
T ss_dssp CCCSSCHHHHHHT---TCCSTT---------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTC
T ss_pred CCCCCchhhhhhc---CCcccc---------ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccCC
Confidence 9899998876542 211110 0111346789999999999999 666788999999999999987532
Q ss_pred CCCCCCCCCCCcCCCCccceEEeCC---CCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCccccccCCCCcc
Q 012024 381 QWTSASRNQYNLRDAVARVTVQVYP---KSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN 457 (472)
Q Consensus 381 ~~~~~~~~~~n~~~p~~rDTv~vp~---~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~ 457 (472)
..+|+.||+|||||.|++ ++|++|||++||||.|+|||||++|++.|||++|. ..+++ ++....+|++
T Consensus 413 -------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~~~~-~~~~~~~p~~ 483 (499)
T 3pxl_A 413 -------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-EDTPD-VKAVNPVPQA 483 (499)
T ss_dssp -------CCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE-ESGGG-HHHHSCCCHH
T ss_pred -------cccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEE-EChhH-hccccCCCHH
Confidence 357889999999999997 89999999999999999999999999999999984 44443 4323456766
Q ss_pred -chhhccccC
Q 012024 458 -ARLCGKAAG 466 (472)
Q Consensus 458 -~~~c~~~~~ 466 (472)
...|..+..
T Consensus 484 ~~~~C~~~~~ 493 (499)
T 3pxl_A 484 WSDLCPTYDA 493 (499)
T ss_dssp HHTHHHHHHT
T ss_pred HHHhhhHhhc
Confidence 568977653
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=4.4e-88 Score=711.22 Aligned_cols=426 Identities=25% Similarity=0.335 Sum_probs=323.1
Q ss_pred ccccccc-----CCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEE
Q 012024 2 SLTATSI-----RSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRI 75 (472)
Q Consensus 2 ~~~n~l~-----~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 75 (472)
-|+|+|. ++|||||||++|++++||||+++ |||+|+||++|+|+|++.+++||||||||.+.|+++||+|+|||
T Consensus 68 ~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV 147 (521)
T 1v10_A 68 NVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVV 147 (521)
T ss_dssp EEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEE
T ss_pred EEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEE
Confidence 4789999 99999999999999999999999 99999999999999997789999999999999999999999999
Q ss_pred eCCCCC-CCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCC---------CceEEEeCCcEEEEE
Q 012024 76 LSRPRI-PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS---------GAAFNVEQGKTYRLR 145 (472)
Q Consensus 76 ~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~---------~~~~~v~~g~~~rlR 145 (472)
+++.+. +.+|+..++|++|+|+||+++...++.. ..+...+.+|+++|||++. .++++|++|++||||
T Consensus 148 ~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~--~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlR 225 (521)
T 1v10_A 148 YDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFR 225 (521)
T ss_dssp ECTTCTTGGGCSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEE
T ss_pred cCCcccccccCCCCCceeEEEEcccccCCHHHHhh--ccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEE
Confidence 987531 2234333469999999999997765532 2223456789999999974 179999999999999
Q ss_pred EEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCCC---CceEEEE
Q 012024 146 ISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTV---LTTTGIL 222 (472)
Q Consensus 146 ~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~~---~~~~ail 222 (472)
|||+|..+.+.|+|+||+|+|||+||++++|..+++|.|+|||||||+|++++.+|+|||++....+... ....|+|
T Consensus 226 liNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail 305 (521)
T 1v10_A 226 IVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIF 305 (521)
T ss_dssp EEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEE
T ss_pred EEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEE
Confidence 9999999999999999999999999999999999999999999999999999778999999876532111 1246999
Q ss_pred EEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCee
Q 012024 223 HYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVS 302 (472)
Q Consensus 223 ~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~ 302 (472)
+|++.........+. +... +. ..+|.+....+.|..... ...++++.+... ..+....|+|||++
T Consensus 306 ~y~~~~~~~p~~~~~-~~~~----~~-----~~~l~p~~~~~~p~~~~~---~~~~~~~~l~~~--~~~~~~~~~iNg~~ 370 (521)
T 1v10_A 306 RYQGAAVAEPTTSQN-SGTA----LN-----EANLIPLINPGAPGNPVP---GGADINLNLRIG--RNATTADFTINGAP 370 (521)
T ss_dssp EETTCCSCCCCCCCC-CSCB----CC-----GGGCCBSSCCCCSSCSST---TCSSEEEECCEE--CCSSSSCCEESSCC
T ss_pred EECCCCCCCCCCCCC-cccc----cc-----hhhcccCCcccCCCcccC---CcceEEEEEEEe--cCCceeEEEECCCc
Confidence 998764221110000 0000 10 012222222222211100 123445544421 11122379999999
Q ss_pred ccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCC
Q 012024 303 FIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQW 382 (472)
Q Consensus 303 f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~ 382 (472)
|..+..|+|.+.+. +.+... ..+.++.++.++.|++|||+++| .+.||||||||+||||+++++.
T Consensus 371 ~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~- 435 (521)
T 1v10_A 371 FIPPTVPVLLQILS---GVTNPN---------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS- 435 (521)
T ss_dssp CCCCSSCHHHHHHH---TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-
T ss_pred ccCCCCchhhhhhc---CCcccc---------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-
Confidence 99888887765432 111100 11224678899999999999999 6899999999999999998753
Q ss_pred CCCCCCCCCcCCCCccceEEe-CCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCccccccCCCC-ccchh
Q 012024 383 TSASRNQYNLRDAVARVTVQV-YPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIP-KNARL 460 (472)
Q Consensus 383 ~~~~~~~~n~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~ 460 (472)
.+|+.+|.|||||.| ++++|++|||++||||.|||||||++|++.|||++|.|... + +++..++| +..+.
T Consensus 436 ------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~-~-~~~~~~~p~~~~~~ 507 (521)
T 1v10_A 436 ------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIP-N-IPIANAISPAWDDL 507 (521)
T ss_dssp ------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGG-G-HHHHSCCCHHHHTH
T ss_pred ------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCc-c-hhhccCCChHHhhh
Confidence 357889999999999 89999999999999999999999999999999999987543 2 22234566 45789
Q ss_pred hccccCC
Q 012024 461 CGKAAGR 467 (472)
Q Consensus 461 c~~~~~~ 467 (472)
|..+..-
T Consensus 508 C~~~~~~ 514 (521)
T 1v10_A 508 CPKYNAN 514 (521)
T ss_dssp HHHHTTC
T ss_pred chhhhcc
Confidence 9888764
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.5e-87 Score=704.70 Aligned_cols=422 Identities=24% Similarity=0.384 Sum_probs=321.4
Q ss_pred ccccccc-----CCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEE
Q 012024 2 SLTATSI-----RSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRI 75 (472)
Q Consensus 2 ~~~n~l~-----~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 75 (472)
-|+|.|. ++|||||||++|++++||||+++ |||+|+||++|+|+|++.+++||||||||.+.|+++||+|+|||
T Consensus 47 ~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV 126 (503)
T 1hfu_A 47 NVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126 (503)
T ss_dssp EEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEE
T ss_pred EEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEE
Confidence 4789999 99999999999999999999999 99999999999999997689999999999999999999999999
Q ss_pred eCCCCC-CCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCC--------CceEEEeCCcEEEEEE
Q 012024 76 LSRPRI-PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS--------GAAFNVEQGKTYRLRI 146 (472)
Q Consensus 76 ~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------~~~~~v~~g~~~rlR~ 146 (472)
+++.+. +.+|+..++|++|+|+||+++...++.. .+.+|++||||++. .+.++|++|++|||||
T Consensus 127 ~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~-------~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRl 199 (503)
T 1hfu_A 127 YDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG-------AAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRL 199 (503)
T ss_dssp ECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEE
T ss_pred cCCCCCcccCCCCCCceEEEEEcccccCChHHhcC-------CCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEE
Confidence 986532 2334333479999999999997765321 25689999999973 2799999999999999
Q ss_pred EEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCC-------CCceE
Q 012024 147 SNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTST-------VLTTT 219 (472)
Q Consensus 147 in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~ 219 (472)
||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++.+|+|||++....+.. .....
T Consensus 200 iN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ 279 (503)
T 1hfu_A 200 ISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNS 279 (503)
T ss_dssp EECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTE
T ss_pred EecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceE
Confidence 99999999999999999999999999999999999999999999999999977899999997653211 11246
Q ss_pred EEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEc
Q 012024 220 GILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAIN 299 (472)
Q Consensus 220 ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN 299 (472)
++|+|.+........ +..|.. . .+.. .+|.+....+.|..... ...++++.+... . ++. .|+||
T Consensus 280 ail~y~~~~~~~p~~-~~~~~~-~--~l~~-----~~l~p~~~~~~p~~~~~---~~~~~~~~l~~~--~-~~~-~~~iN 343 (503)
T 1hfu_A 280 AILRYAGAANADPTT-SANPNP-A--QLNE-----ADLHALIDPAAPGIPTP---GAADVNLRFQLG--F-SGG-RFTIN 343 (503)
T ss_dssp EEEEETTSCSSCCCC-CCCSSC-C--BCCG-----GGCBBSSSCSCSSCSST---TCSSEEEECCEE--E-ETT-EEEET
T ss_pred EEEEECCCCCCCCCC-CCCCcc-C--CCcc-----ccccccCccCCCCcccC---CcceEEEEEEee--c-cCc-eEEEC
Confidence 999998764211100 001110 0 0110 12222211112211000 023444444321 1 122 79999
Q ss_pred CeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEE-cCCCCCCCeeecCCceEEEEee
Q 012024 300 SVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQ-NDEDIIQSYHLNGYQFWVVGMD 378 (472)
Q Consensus 300 g~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~-N~~~~~HP~HlHG~~F~Vl~~~ 378 (472)
|++|..+..|+|.+.+. +.+... ..+.++.++.++.|++|||+++ |...+.||||||||+||||+++
T Consensus 344 g~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~ 411 (503)
T 1hfu_A 344 GTAYESPSVPTLLQIMS---GAQSAN---------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSA 411 (503)
T ss_dssp TBCCCCCSSCHHHHHHT---TCCSGG---------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECT
T ss_pred CCccCCCCCcchhhhhc---CCcccc---------cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecC
Confidence 99999888888765432 211100 1123467889999999999999 4557899999999999999998
Q ss_pred cCCCCCCCCCCCCcCCCCccceEEe-CCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCccccccCCCC-c
Q 012024 379 GGQWTSASRNQYNLRDAVARVTVQV-YPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIP-K 456 (472)
Q Consensus 379 ~g~~~~~~~~~~n~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~ 456 (472)
++. .+|+.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||+.|.|...+ +++..++| +
T Consensus 412 ~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~ 482 (503)
T 1hfu_A 412 GSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVE 482 (503)
T ss_dssp TCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHH
T ss_pred CCC-------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChH
Confidence 753 357788999999999 899999999999999999999999999999999999875332 22234467 4
Q ss_pred cchhhccccCC
Q 012024 457 NARLCGKAAGR 467 (472)
Q Consensus 457 ~~~~c~~~~~~ 467 (472)
..+.|..+..-
T Consensus 483 ~~~~C~~~~~~ 493 (503)
T 1hfu_A 483 WAQLCEIYDDL 493 (503)
T ss_dssp HHHHHHHHHTC
T ss_pred Hhhhccchhhc
Confidence 57899887653
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2.8e-86 Score=702.53 Aligned_cols=428 Identities=23% Similarity=0.329 Sum_probs=322.5
Q ss_pred cccccc-cCCeeEeccCCCCCCCCCCCCCCc-cCCCCCC-CCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCC
Q 012024 2 SLTATS-IRSAFANGNGIQNRRNSFEDGVYG-TTCPIPP-GKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSR 78 (472)
Q Consensus 2 ~~~n~l-~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~p-G~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 78 (472)
-|+|.| .++|||||||++|.+++||||+++ |||||+| |++|+|+|++ .++||||||||.+.|+++||+|+|||+++
T Consensus 80 ~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 80 TVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGP 158 (559)
T ss_dssp EEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCC
Confidence 479999 689999999999999999999999 9999999 9999999999 58999999999999999999999999987
Q ss_pred CCCCCCCCCCCCcc-EEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCC--------CceEEEeCCcEEEEEEEEc
Q 012024 79 PRIPVPFPDPAGDY-TVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS--------GAAFNVEQGKTYRLRISNV 149 (472)
Q Consensus 79 ~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------~~~~~v~~g~~~rlR~in~ 149 (472)
.. .+ ++.|. +|+|+||+++...++..... ....+.+++++|||+.. .+.++|++|++|||||||+
T Consensus 159 ~~--~~---~d~d~~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa 232 (559)
T 2q9o_A 159 AS--LP---YDIDLGVFPITDYYYRAADDLVHFTQ-NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNT 232 (559)
T ss_dssp CS--SC---CSEEEEEEEEEEECSSCHHHHHHHHT-TSCCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEEC
T ss_pred Cc--CC---CcccceEEEEeccccCCHHHHhhhhh-cCCCCccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEec
Confidence 53 23 47777 99999999998876643222 23456789999999973 3689999999999999999
Q ss_pred cCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEee--ee---cCCCCceEEEEEE
Q 012024 150 GLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSS--RF---TSTVLTTTGILHY 224 (472)
Q Consensus 150 ~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~--~~---~~~~~~~~ail~y 224 (472)
|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++.+|+|||++.. .. ........|+|+|
T Consensus 233 ~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y 312 (559)
T 2q9o_A 233 STENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHY 312 (559)
T ss_dssp CSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEE
T ss_pred CCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEE
Confidence 999999999999999999999999999999999999999999999999778899999976 21 1222356899999
Q ss_pred eCCCCCCCCCCCCCCC-ccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCeec
Q 012024 225 SNSAGPVSGPIPGGPT-VQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSF 303 (472)
Q Consensus 225 ~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f 303 (472)
.+.... +|..+. ...+ . .+... ..|.+..+.+.|...+. ...++++.+.... ...+...|+|||++|
T Consensus 313 ~~~~~~----~P~~~~~~~~~--~-~~~~~-~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~-~~~~~~~~~iNg~s~ 380 (559)
T 2q9o_A 313 AGAPGG----LPTDEGTPPVD--H-QCLDT-LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL-TGTPLFVWKVNGSDI 380 (559)
T ss_dssp TTSCCS----CCCCCCCCCCC--C-TTCCC-SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC-SSSSSCEEEETTBCC
T ss_pred CCCCCC----CCCCCCCcCCC--c-ccccc-cccccCCCCCCCCcccc---cceeEEEEEEeec-CCCceEEEEECCEec
Confidence 865421 121110 0000 0 00000 12222222212221110 1122344443211 122456899999999
Q ss_pred cC-CCCccccccccccCceeecCCCCCCCCCCCcccceeEEeec-CCcEEEEEEEcCC----CCCCCeeecCCceEEEEe
Q 012024 304 IP-ADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD-YRAFIEIVFQNDE----DIIQSYHLNGYQFWVVGM 377 (472)
Q Consensus 304 ~~-p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~g~~ve~vi~N~~----~~~HP~HlHG~~F~Vl~~ 377 (472)
.. +..|+|.+.+.+. . ..| .+..++.++ .++|++|+++|.+ .+.||||||||+||||++
T Consensus 381 ~~~~~~P~L~~~~~g~-~--------~~~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~ 445 (559)
T 2q9o_A 381 NVDWGKPIIDYILTGN-T--------SYP------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGR 445 (559)
T ss_dssp CCCTTSCHHHHHHHTC-C--------CCC------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEE
T ss_pred ccCCCCCcHhHhhcCC-c--------cCC------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEec
Confidence 74 4678765433211 0 011 245667776 4689999999976 689999999999999999
Q ss_pred ec---------CCCCCC-CCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCcc
Q 012024 378 DG---------GQWTSA-SRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTS 447 (472)
Q Consensus 378 ~~---------g~~~~~-~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~ 447 (472)
++ |.|++. ....+|+.+|+|||||.|++++|++|||++||||.|||||||++|++.|||++|.|... +
T Consensus 446 g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~-~- 523 (559)
T 2q9o_A 446 SPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA-D- 523 (559)
T ss_dssp SCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-H-
T ss_pred ccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc-h-
Confidence 87 666542 12457889999999999999999999999999999999999999999999999977532 2
Q ss_pred ccccCCC--Cc-cchhhcccc
Q 012024 448 LRDEYPI--PK-NARLCGKAA 465 (472)
Q Consensus 448 ~~~~~~~--p~-~~~~c~~~~ 465 (472)
+++..++ |+ ..++|..+.
T Consensus 524 ~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 524 LRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp HGGGCCHHHHHHHHHHHHHHH
T ss_pred hhhccccCCchhhhhhccccc
Confidence 3323334 64 467998764
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3.3e-79 Score=631.97 Aligned_cols=352 Identities=19% Similarity=0.237 Sum_probs=278.6
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeC-CceeeeEEeccc----chhhhcCceeEEEEe
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVK-DQIGSFYYFPSL----AFHKAAGGFGGIRIL 76 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~ 76 (472)
.|+|.|+++|||||||+++. +++||++ +.|+||++|+|+|+++ +++||||||||. +.|+++||+|+|||+
T Consensus 60 ~~~N~l~~~tsiHwHG~~~~--~~~DG~~---~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~ 134 (439)
T 2xu9_A 60 TLENRLPEPTNLHWHGLPIS--PKVDDPF---LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVE 134 (439)
T ss_dssp EEEECSSSCBCCEEETCCCC--TTTSCTT---CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEEC
T ss_pred EEEECCCCCcceEeCCCCCC--ccccCCc---ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEc
Confidence 48999999999999999985 4899986 4599999999999986 589999999997 479999999999999
Q ss_pred CCCCCCCCCCCCCCccEEEEeccccCCHHH----HHHHhhcCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCC
Q 012024 77 SRPRIPVPFPDPAGDYTVLIGDWYKSNHTD----LRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ 152 (472)
Q Consensus 77 ~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~----~~~~~~~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~ 152 (472)
++.+. .+....++|++|+|+||+++.... ....+ . ...++.++|||+. .|.++|++| +|||||||+|+.
T Consensus 135 ~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~~~~~~~~-~---g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~ 207 (439)
T 2xu9_A 135 SSLDA-IPELREAEEHLLVLKDLALQGGRPAPHTPMDWM-N---GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNA 207 (439)
T ss_dssp CGGGG-SHHHHTSEEEEEEEEEECEETTEECCCCHHHHH-H---CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSS
T ss_pred Ccccc-CccCCCCCcEEEEEEeeeeCCCCcCCCCccccc-c---CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCC
Confidence 86532 121134789999999999885310 00111 1 2357899999997 589999999 999999999999
Q ss_pred CcEeEEEeCceeEEEEeCCccc-cceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecC------------------
Q 012024 153 NSLNFRIQNHKMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS------------------ 213 (472)
Q Consensus 153 ~~~~~~i~~h~~~via~DG~~~-~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~------------------ 213 (472)
+.+.|+|+||+|+|||+||+++ +|..++++.|+|||||||+|++++ +|+|+|++......
T Consensus 208 ~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (439)
T 2xu9_A 208 RYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGP 286 (439)
T ss_dssp CCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCS
T ss_pred ceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCC
Confidence 9999999999999999999998 899999999999999999999996 78999998643211
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCe
Q 012024 214 TVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGK 293 (472)
Q Consensus 214 ~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~ 293 (472)
......++|+|.+... ..++|. .+.+....+.+ ..++++.+.... . +
T Consensus 287 ~~~~~~~~l~~~~~~~--~~~~p~------------------~l~~~~~l~~~---------~~~r~~~l~~~~--~-g- 333 (439)
T 2xu9_A 287 SRPETLLYLIAPKNPK--PLPLPK------------------ALSPFPTLPAP---------VVTRRLVLTEDM--M-A- 333 (439)
T ss_dssp CCCEEEEEEEECSSCC--CCCCCS------------------CCCCCCCCCCC---------SEEEEEEEEEEG--G-G-
T ss_pred CCcceeEEEEecCCCc--cccCcc------------------cCCCcccCCCC---------CcceEEEEEeec--c-C-
Confidence 1124567788876431 111221 01001111111 124666665422 1 1
Q ss_pred EeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCCCCCCeeecCCceE
Q 012024 294 QRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFW 373 (472)
Q Consensus 294 ~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~ 373 (472)
..|+|||++|..+..+ +.++.|++|+|+|+|.+.+.||||||||+||
T Consensus 334 ~~~~iNg~~~~~~~~~---------------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~ 380 (439)
T 2xu9_A 334 ARFFINGQVFDHRRVD---------------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQ 380 (439)
T ss_dssp TEEEETTBCCCTTCCC---------------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBE
T ss_pred ceEeECCEECCCCCCc---------------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEE
Confidence 3799999998643221 3578999999999999989999999999999
Q ss_pred EEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEe
Q 012024 374 VVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 374 Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 442 (472)
||+++++++ .+|.|||||.|++++|++|||++||||.|||||||++|||.|||+.|+|+
T Consensus 381 Vl~~~g~~~----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 381 VLSVGGRPF----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EEEETTEEC----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEeeCCCCC----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999987643 36899999999999999999999999999999999999999999999884
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.6e-79 Score=633.64 Aligned_cols=358 Identities=16% Similarity=0.177 Sum_probs=281.0
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEeccc----chhhhcCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL----AFHKAAGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~ 77 (472)
-|+|+|+++|||||||++|.++ |||+| ||+|+||++|+|+|++.+++||||||||. +.|+++||+|+|||++
T Consensus 63 ~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~ 138 (451)
T 2uxt_A 63 IYSNRLTENVSMTVAGLQVPGP--LMGGP--ARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVED 138 (451)
T ss_dssp EEEECSSSCBCEEEETCCCCGG--GSCSG--GGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEEC
T ss_pred EEEECCCCCccEEECCccCCCC--CCCCC--cCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEec
Confidence 4899999999999999999765 99997 89999999999999997669999999998 6899999999999999
Q ss_pred CCCCCCCCCC--CCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcE
Q 012024 78 RPRIPVPFPD--PAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSL 155 (472)
Q Consensus 78 ~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~ 155 (472)
+.+...+++. .++|++|+|+||+++.+.++.. ...+.....+++++|||+. .|+++|++| +|||||||+|..+.+
T Consensus 139 ~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~-~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~ 215 (451)
T 2uxt_A 139 EVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY-NEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRY 215 (451)
T ss_dssp HHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC-CCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCE
T ss_pred CcccccCCCccCCCceEEEEEEeeecCCCCceec-ccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeE
Confidence 7643333332 4789999999999986554321 1122335678999999997 479999999 999999999999999
Q ss_pred eEEE-eCceeEEEEeCCccc-cceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeec-----------CCCCceEEEE
Q 012024 156 NFRI-QNHKMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFT-----------STVLTTTGIL 222 (472)
Q Consensus 156 ~~~i-~~h~~~via~DG~~~-~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~-----------~~~~~~~ail 222 (472)
.|+| |||+|+|||+||+++ +|..++++.|+|||||||+|++++ +++|+|++..... .......+++
T Consensus 216 ~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il 294 (451)
T 2uxt_A 216 QLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVL 294 (451)
T ss_dssp EEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEE
T ss_pred EEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceE
Confidence 9999 899999999999998 899999999999999999999984 6899999765321 1112346788
Q ss_pred EEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCee
Q 012024 223 HYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVS 302 (472)
Q Consensus 223 ~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~ 302 (472)
+|........ .....| ..|.+....+.+ ...++++.+.. .|+|||++
T Consensus 295 ~~~~~~~~~~-~~~~~p---------------~~L~~~~~~~~~--------~~~~~~~~l~~---------~~~iNg~~ 341 (451)
T 2uxt_A 295 TLRPTGLLPL-VTDSLP---------------MRLLPTEIMAGS--------PIRSRDISLGD---------DPGINGQL 341 (451)
T ss_dssp EEEECSCCC-----CCC---------------SCSSSSCCCCCC--------CSEEEEEEECS---------SSSBTTBC
T ss_pred EEEecCCCcC-ccccCc---------------cccCCCCCCCCC--------CcceEEEEEee---------EEEECCEe
Confidence 8876532110 000011 112211111111 13456666641 69999999
Q ss_pred ccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCC
Q 012024 303 FIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQW 382 (472)
Q Consensus 303 f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~ 382 (472)
|..+.. .+.++.|++|+|+|+|. +.||||||||+||||++++..
T Consensus 342 f~~~~~---------------------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~~- 385 (451)
T 2uxt_A 342 WDVNRI---------------------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGAM- 385 (451)
T ss_dssp CCTTCC---------------------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTBC-
T ss_pred CCCCCC---------------------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCcC-
Confidence 864211 14578999999999997 689999999999999997532
Q ss_pred CCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee----eEeeecchhHHhcccEEEEEEecCC
Q 012024 383 TSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM----WNLRSESWARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 383 ~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~----w~~HCHil~H~d~GMm~~~~V~~~~ 445 (472)
+++.+|.|||||.| +++++|+|++||||. |||||||++|||.|||+.|+|...+
T Consensus 386 -------~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 386 -------PFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp -------CCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred -------CCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 45667999999999 899999999999988 9999999999999999999997553
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=3.8e-78 Score=635.38 Aligned_cols=372 Identities=14% Similarity=0.150 Sum_probs=286.6
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEecccc----hhhhcCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~ 77 (472)
.++|+|+++|||||||+++.. +|||+ +||+|+||++|+|+|++.+++||||||||.+ .|+++||+|+|||++
T Consensus 82 ~v~N~l~~~tsiHwHGl~~~~--~~DG~--~~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~ 157 (534)
T 3abg_A 82 RFINNAEAPNSVHLHGSFSRA--AFDGW--AEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTD 157 (534)
T ss_dssp EEEECSSSCBCEEEETCCCCT--TTTTC--SSSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEEC
T ss_pred EEEECCCCCceEEECCCcCCC--CCCCC--CCCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEEC
Confidence 479999999999999999854 69998 5899999999999999976789999999985 589999999999999
Q ss_pred CCCCCCCCCC--CCCccEEEEeccccCCHHHHHHHhhcC-CCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCc
Q 012024 78 RPRIPVPFPD--PAGDYTVLIGDWYKSNHTDLRAHLDKG-KKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNS 154 (472)
Q Consensus 78 ~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~-~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~ 154 (472)
+.+.+.+++. ++.|++|+|+||+++.++++.. ..+ .....+|.++|||+. .+.++|++ ++|||||||+|+.+.
T Consensus 158 ~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~--~~~~~~~~~gd~~lvNG~~-~p~~~v~~-~~~RlRliNa~~~~~ 233 (534)
T 3abg_A 158 PAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT--TNGELNSFWGDVIHVNGQP-WPFKNVEP-RKYRFRFLDAAVSRS 233 (534)
T ss_dssp TTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC--CTTCSSCCCCSEEEETTEE-SCBCBCCS-SEEEEEEEECCSSCC
T ss_pred CcccccCCCccCCcceEEEEEeeeeecCCCceec--cCCCCccccCceeccCCcc-CceEEecC-cEEEEEEEecCCcce
Confidence 8765544443 3678999999999886544311 112 123568999999996 57999998 599999999999999
Q ss_pred EeEEEeC-------ceeEEEEeCCccc-cceeeeEEEEcCCCeEEEEEEeCCCCC-ceEEEEeeee--c----CCCCceE
Q 012024 155 LNFRIQN-------HKMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPAR-DYYIVVSSRF--T----STVLTTT 219 (472)
Q Consensus 155 ~~~~i~~-------h~~~via~DG~~~-~p~~~~~l~l~~G~R~dv~v~~~~~~g-~y~i~~~~~~--~----~~~~~~~ 219 (472)
+.|+|++ |+|+|||+||+++ +|..+++|.|+|||||||+|++++.+| +|+|++.... + .......
T Consensus 234 ~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (534)
T 3abg_A 234 FGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTD 313 (534)
T ss_dssp EEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTS
T ss_pred EEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcc
Confidence 9999987 9999999999864 899999999999999999999997566 6999874311 0 1112456
Q ss_pred EEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEc
Q 012024 220 GILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAIN 299 (472)
Q Consensus 220 ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN 299 (472)
++++|.....+.. ..+. .++..|.+... +.+. ...++++.+... ...|+||
T Consensus 314 ~il~~~~~~~~~~-~~~~--------------~~P~~L~~~~~-p~~~-------~~~~~~~~~~~~------~~~w~iN 364 (534)
T 3abg_A 314 KVMRFVVADDTTQ-PDTS--------------VVPANLRDVPF-PSPT-------TNTPRQFRFGRT------GPTWTIN 364 (534)
T ss_dssp EEEEEECCCCSSC-SCCC--------------CCCCCCCCCSC-CCCC-------CCCCEEEECSCC------CSTTCCC
T ss_pred eeEEEecCCCCcC-CCCC--------------CCccccccCCC-CCCc-------cccceEEEEecc------CceeEEC
Confidence 8999976542100 0000 00111211110 1111 134667766531 2369999
Q ss_pred CeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCC-CCCCeeecCCceEEEEee
Q 012024 300 SVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDED-IIQSYHLNGYQFWVVGMD 378 (472)
Q Consensus 300 g~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~~ 378 (472)
|++|..+..|++ +.++.|++++|+|+|.+. +.||||||||+||||+++
T Consensus 365 G~~f~~~~~p~l-------------------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~ 413 (534)
T 3abg_A 365 GVAFADVQNRLL-------------------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRT 413 (534)
T ss_dssp CBTTBCTTSCCC-------------------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEES
T ss_pred CcccCCCCCcce-------------------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEc
Confidence 999975544432 246889999999999874 589999999999999996
Q ss_pred cCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEE-ecCceeeEeeecchhHHhcccEEEEEEecCC
Q 012024 379 GGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIA-LDNVGMWNLRSESWARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 379 ~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 445 (472)
.|.+.. ...++.+ .|||||.|+++++++|||+ +||||.|||||||++|++.|||+.|+|...+
T Consensus 414 ~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 414 SGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp SCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 553321 1245566 8999999999999999999 8999999999999999999999999997654
No 12
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4.8e-78 Score=623.26 Aligned_cols=360 Identities=18% Similarity=0.230 Sum_probs=277.0
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEecc----cchhhhcCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPS----LAFHKAAGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~ 77 (472)
-|+|+|+++|||||||+++. ++|||+++ |+|+||++|+|+|++++++|||||||| ++.|+++||+|+|||++
T Consensus 51 ~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~ 126 (448)
T 3aw5_A 51 TLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVED 126 (448)
T ss_dssp EEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEEC
T ss_pred EEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeC
Confidence 47999999999999999984 57999997 999999999999999768999999999 77999999999999999
Q ss_pred CCCCCCCCCCCCCccEEEEeccccCCHHHHHHH--hhcCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcE
Q 012024 78 RPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAH--LDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSL 155 (472)
Q Consensus 78 ~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~ 155 (472)
+.+. .+++...+|++|+|+||+++. +++... ........++++++|||+. .++++|++| +|||||||+|+.+.+
T Consensus 127 ~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~ 202 (448)
T 3aw5_A 127 SGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLY 202 (448)
T ss_dssp TTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCE
T ss_pred Cccc-cCCCCCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceE
Confidence 7654 322222389999999999987 442110 0001123568999999997 589999999 999999999999999
Q ss_pred eEEE--eC---ceeEEEEeCCcccc-ceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeec--C------------CC
Q 012024 156 NFRI--QN---HKMKLVEVEGTHTL-QTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFT--S------------TV 215 (472)
Q Consensus 156 ~~~i--~~---h~~~via~DG~~~~-p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~--~------------~~ 215 (472)
.|+| ++ |+|+|||+||++++ |..+++|.|+|||||||+|+++ .+.|||++..... . ..
T Consensus 203 ~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~ 280 (448)
T 3aw5_A 203 MLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGS 280 (448)
T ss_dssp EEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTS
T ss_pred EEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCC
Confidence 9999 99 99999999999997 9999999999999999999998 3689999865421 0 11
Q ss_pred CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEe
Q 012024 216 LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQR 295 (472)
Q Consensus 216 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 295 (472)
....++++|.+..... . |. .+. +.++.+.+ ...++++.+... ...
T Consensus 281 ~~~~~~~~~~~~~~~~-----~-p~-----~L~----------~lp~~~~~--------~~~~~~~~l~~~------~~~ 325 (448)
T 3aw5_A 281 EYTIATFLVEGKGEAV-----P-VE-----ALS----------DPPPEPPK--------PTRTRRFALSLS------GMQ 325 (448)
T ss_dssp CEEEEEEEEEEECCCC-----C-CC-----CCS----------CCCCCCCC--------CSEEEEEEEEEE------TTE
T ss_pred CceEEEEEEcCCCCCC-----C-cc-----ccC----------CCCCCCCC--------CCceEEEEEeCC------Cce
Confidence 2345667776543211 0 11 010 00000111 135677776541 135
Q ss_pred EEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEe-ecCCcEEEEEEEcCC-CCCCCeeecCCceE
Q 012024 296 YAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMG-ADYRAFIEIVFQNDE-DIIQSYHLNGYQFW 373 (472)
Q Consensus 296 ~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~ 373 (472)
|+|||++|..+ .|. +. ++.|++|+|+|+|.+ .+.||||||||+||
T Consensus 326 ~~iNg~~~~~~-~p~--------------------------------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~ 372 (448)
T 3aw5_A 326 WTINGMFWNAS-NPL--------------------------------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMW 372 (448)
T ss_dssp EEETTBCCCTT-CTT--------------------------------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBE
T ss_pred eeECCCcCCCC-CCc--------------------------------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEE
Confidence 99999999632 121 23 578999999999998 88999999999999
Q ss_pred EEEeecCCCC-CCCCCCC----CcCCCCccceEEeCCCCEEEEE--EE---ecCceeeEeeecchhHHhcccEEEEEEe
Q 012024 374 VVGMDGGQWT-SASRNQY----NLRDAVARVTVQVYPKSWSAIY--IA---LDNVGMWNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 374 Vl~~~~g~~~-~~~~~~~----n~~~p~~rDTv~vp~~g~~~ir--f~---adnpG~w~~HCHil~H~d~GMm~~~~V~ 442 (472)
||++++ .+. ......+ +..++.|||||.|+++++++|+ |+ +||| |||||||++|+|.|||..|+|.
T Consensus 373 Vl~~~G-~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 373 IIERKD-SPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEEES-CCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEecC-CCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 999964 332 0111122 3345679999999999999655 98 8999 9999999999999999999873
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=4.2e-77 Score=627.05 Aligned_cols=372 Identities=14% Similarity=0.134 Sum_probs=276.0
Q ss_pred CeeEeccCCCCCCCCCCCCCCc---cCCCCCCCCeE---EEEEEeCCceeeeEEecccc----hhhhcCceeEEEEeCCC
Q 012024 10 SAFANGNGIQNRRNSFEDGVYG---TTCPIPPGKNF---TYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRILSRP 79 (472)
Q Consensus 10 ~tsiHwHG~~~~~~~~~DGv~~---tq~~i~pG~~~---~Y~~~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~ 79 (472)
+|||||||+++. ++|||+|. +||+|+||++| +|+|++.+++||||||||.+ .|+++||+|+|||+++.
T Consensus 101 ~tsiHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~ 178 (513)
T 2wsd_A 101 KTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 178 (513)
T ss_dssp CBCEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGG
T ss_pred CcEEEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccc
Confidence 999999999985 57999984 89999999555 99999877899999999985 58999999999999976
Q ss_pred CCCCCCCCCCCccEEEEeccccCCHHHHHHHhh-----------cCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEE
Q 012024 80 RIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLD-----------KGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISN 148 (472)
Q Consensus 80 ~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in 148 (472)
+.+.+++.+++|++|+|+||+++.++++..... .......++++||||+. .+.++|+++ +|||||||
T Consensus 179 ~~~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~~-~~RlRliN 256 (513)
T 2wsd_A 179 EKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKV-WPYLEVEPR-KYRFRVIN 256 (513)
T ss_dssp GGGGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE-SCEEECCSS-EEEEEEEE
T ss_pred cccccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcc-cceEEecCC-EEEEEEEc
Confidence 554455567899999999999886544311100 01123568999999997 579999985 89999999
Q ss_pred ccCCCcEeEEEeCc-eeEEEEeCCccc-cceeeeEEEEcCCCeEEEEEEeCCCCCc-eEEEEeeeecC--CCCceEEEEE
Q 012024 149 VGLQNSLNFRIQNH-KMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARD-YYIVVSSRFTS--TVLTTTGILH 223 (472)
Q Consensus 149 ~~~~~~~~~~i~~h-~~~via~DG~~~-~p~~~~~l~l~~G~R~dv~v~~~~~~g~-y~i~~~~~~~~--~~~~~~ail~ 223 (472)
+|+.+.+.|+|++| +|+|||+||+++ +|..+++|.|+|||||||+|++++.+|+ +.++....... ......++|+
T Consensus 257 a~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~ 336 (513)
T 2wsd_A 257 ASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQ 336 (513)
T ss_dssp CCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEE
T ss_pred cCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEE
Confidence 99999999999999 999999999998 8999999999999999999999876676 33333221101 1123468899
Q ss_pred EeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCeec
Q 012024 224 YSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSF 303 (472)
Q Consensus 224 y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f 303 (472)
|..............|. .+ ......+.. ....++++.+..... ..+...|+|||++|
T Consensus 337 ~~~~~~~~~~~~~~~p~-----~l----------~~~~~~~~~-------~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~ 393 (513)
T 2wsd_A 337 FRVTKPLAQKDESRKPK-----YL----------ASYPSVQHE-------RIQNIRTLKLAGTQD-EYGRPVLLLNNKRW 393 (513)
T ss_dssp EECCSCCSSCCCCCCCS-----BC----------SCCGGGCCC-------CEEEEEEEEEEEEEC-TTSCEEEEETTBCT
T ss_pred EEeccCcccCccCCCCc-----cc----------cCCCCcccC-------CCcceEEEEEEeecC-CCCCceEeECCccC
Confidence 97653111000001111 01 000000000 113456666654221 22455789999998
Q ss_pred cCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecC---
Q 012024 304 IPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGG--- 380 (472)
Q Consensus 304 ~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g--- 380 (472)
..+ . .+.++.|++|+|+|+|.+.+.||||||||+||||+++++
T Consensus 394 ~~~---~-------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 394 HDP---V-------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp TSC---C-------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHH
T ss_pred CCc---c-------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccc
Confidence 532 1 024578999999999998899999999999999999863
Q ss_pred CCCCCCCCCCCcC---------CCCccceEEeCCCCEEEEEEEe-cCceeeEeeecchhHHhcccEEEEEEecC
Q 012024 381 QWTSASRNQYNLR---------DAVARVTVQVYPKSWSAIYIAL-DNVGMWNLRSESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 381 ~~~~~~~~~~n~~---------~p~~rDTv~vp~~g~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~ 444 (472)
.|++.. .+++. ++.|||||.|+++++++|+|++ ||||.|||||||++|++.|||+.|+|.++
T Consensus 440 ~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 440 RYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp HHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred cccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 222111 12222 3469999999999999999998 89999999999999999999999999754
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.9e-75 Score=605.18 Aligned_cols=360 Identities=18% Similarity=0.212 Sum_probs=271.2
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCc-eeeeEEeccc----chhhhcCceeEEEEe
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQ-IGSFYYFPSL----AFHKAAGGFGGIRIL 76 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~ 76 (472)
.|+|+|+++|||||||+++ +++|||++ ||+|+||++|+|+|+++++ +||||||||. +.|+++||+|+|||+
T Consensus 95 ~v~N~l~~~tsiHwHGl~~--~~~~DG~p--q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~ 170 (481)
T 3zx1_A 95 LVKNKLKEATTIHWHGVPV--PPDQDGSP--HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIK 170 (481)
T ss_dssp EEEECSSSCBCCEEETCCC--CGGGSCCT--TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEE
T ss_pred EEEeCCCCCeeEEecCccc--CCccCCCc--cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEc
Confidence 4899999999999999998 46899995 8999999999999999743 8999999996 589999999999999
Q ss_pred CCCCCCCCCCCCCCccEEEEeccccCCHHHHHH-HhhcCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcE
Q 012024 77 SRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRA-HLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSL 155 (472)
Q Consensus 77 ~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~-~~~~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~ 155 (472)
++++....+ +.++ |+|+||+++.++++.. ..........++.++|||+. .|+++|++|+ ||||||+|+.+.+
T Consensus 171 ~~~~~~~~~---~~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~ 243 (481)
T 3zx1_A 171 AKKDALSHL---KEKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYL 243 (481)
T ss_dssp CSSCTTTTS---EEEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCE
T ss_pred CccccccCC---Ccee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEE
Confidence 976543332 3344 9999999986543210 00000012467899999997 4799999998 9999999999999
Q ss_pred eEEEeCceeEEEEeCCccc-cceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecC-----CCCceEEEEEEeCCCC
Q 012024 156 NFRIQNHKMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS-----TVLTTTGILHYSNSAG 229 (472)
Q Consensus 156 ~~~i~~h~~~via~DG~~~-~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~~ 229 (472)
.|+|++|+|+|||+||+++ +|..+++|.|+|||||||+|++++ ++.|.|.+...... .......++++....
T Consensus 244 ~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 321 (481)
T 3zx1_A 244 NLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKK- 321 (481)
T ss_dssp EEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC-
T ss_pred EEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCC-
Confidence 9999999999999998776 899999999999999999999984 67898876432210 112233444443222
Q ss_pred CCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccC-----Ce--------EeE
Q 012024 230 PVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVN-----GK--------QRY 296 (472)
Q Consensus 230 ~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----g~--------~~~ 296 (472)
.+..+|. .|.+.++.+.+ ..++++.+........ +. ..|
T Consensus 322 -~~~~lP~------------------~l~~~~~~~~~---------~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (481)
T 3zx1_A 322 -ENVELPK------------------NLKIFKPSEEP---------KEFKEIIMSEDHMQMHGMMGKSEGELKIALASMF 373 (481)
T ss_dssp -CCCCCCS------------------CSCCCCCCCCC---------CEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTE
T ss_pred -CCccCCc------------------cccCCCCCCCC---------CcEEEEEEeccchhccccccccccccccccccee
Confidence 1112221 11111111111 2456666643211000 11 249
Q ss_pred EEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEE
Q 012024 297 AINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVG 376 (472)
Q Consensus 297 ~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~ 376 (472)
+|||+.|.. ..| .+.++.|++|+|+|.|.+.+.|||||||+.|||++
T Consensus 374 ~iNG~~~~~-~~~--------------------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~ 420 (481)
T 3zx1_A 374 LINRKSYDL-KRI--------------------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELIS 420 (481)
T ss_dssp EETTBCCCT-TCC--------------------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEE
T ss_pred EECCEeCCC-CCc--------------------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEE
Confidence 999998852 111 14678999999999999989999999999999999
Q ss_pred e--ecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEec
Q 012024 377 M--DGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYT 443 (472)
Q Consensus 377 ~--~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 443 (472)
+ ++... ...++.|||||.|+|+++++|+|++||||.|||||||++|+|.|||..|+|.+
T Consensus 421 ~~~~g~~~--------~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 421 SKLNGKVQ--------KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp EEETTEEE--------ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred ecccCCCC--------CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEeC
Confidence 8 43221 12247899999999999999999999999999999999999999999999863
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-75 Score=630.56 Aligned_cols=387 Identities=14% Similarity=0.116 Sum_probs=263.9
Q ss_pred CeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEeccc----chhhhcCceeEEEEeCCCCCCCCC
Q 012024 10 SAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL----AFHKAAGGFGGIRILSRPRIPVPF 85 (472)
Q Consensus 10 ~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~ 85 (472)
.|+|||||+++ +++|||+ +||+|+||++|+|+|++.+++||||||||. +.|+++||+|+|||+++++...++
T Consensus 127 ~ttiHwHGl~~--~~~~DGv--~q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~ 202 (612)
T 3gyr_A 127 WSVTHLHGAQT--GGGNDGW--ADNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGL 202 (612)
T ss_dssp CBCEEEETCCC--CTTTSCC--GGGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTC
T ss_pred CceEEcCCCcc--CCcccCc--ccCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCC
Confidence 47899999998 4679998 589999999999999997778999999996 589999999999999987656666
Q ss_pred CCCCCccEEEEeccccCCHHHHHHH--h-------h-----c---CCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEE
Q 012024 86 PDPAGDYTVLIGDWYKSNHTDLRAH--L-------D-----K---GKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISN 148 (472)
Q Consensus 86 ~~~~~e~~l~l~d~~~~~~~~~~~~--~-------~-----~---~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in 148 (472)
+.+++|++|+|+||+++.+.+.... + . . ......++.++|||+. .+.+.+++ ++|||||||
T Consensus 203 p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~-~p~~~v~~-~~yRlRliN 280 (612)
T 3gyr_A 203 PSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI-WPYADVDD-GWYRLRLVN 280 (612)
T ss_dssp CCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE-SCEEEEES-SEEEEEEEE
T ss_pred CCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc-cceEeccC-cEEEEEEEe
Confidence 6789999999999998754332100 0 0 0 0123457899999996 57888876 589999999
Q ss_pred ccCCCcEeEEEeCc-------eeEEEEeCCccc-cceee------eEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecC-
Q 012024 149 VGLQNSLNFRIQNH-------KMKLVEVEGTHT-LQTTY------SSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS- 213 (472)
Q Consensus 149 ~~~~~~~~~~i~~h-------~~~via~DG~~~-~p~~~------~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~- 213 (472)
+|+.+.+.|+|++| +|+|||+||+++ +|+.+ ++|.|+|||||||+|++++..|.++.........
T Consensus 281 as~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~ 360 (612)
T 3gyr_A 281 ASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAP 360 (612)
T ss_dssp CCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSC
T ss_pred ccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCC
Confidence 99999999999998 499999999998 56554 5899999999999999998766554433322111
Q ss_pred -------CCCceEEEEEEeCCCCC--CCCCCCCCCCcccc---ccchhhcccccCCCCCCCCCCCCCCCCccccceeeEE
Q 012024 214 -------TVLTTTGILHYSNSAGP--VSGPIPGGPTVQID---WSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTI 281 (472)
Q Consensus 214 -------~~~~~~ail~y~~~~~~--~~~~~p~~p~~~~~---~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 281 (472)
......++++|...... ....+|........ .......... .+...... .. .......
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~-------~~~~~~~ 430 (612)
T 3gyr_A 361 AGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLTPPGTK--GS-------GGHPEIW 430 (612)
T ss_dssp TTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEECTTCT--TT-------TTCCEEE
T ss_pred cCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccc-cccccccc--cc-------ccccccc
Confidence 11234456666543321 11112211000000 0000000000 00000000 00 0000000
Q ss_pred Eecccc----------------cccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEee
Q 012024 282 RLSSSA----------------GQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGA 345 (472)
Q Consensus 282 ~~~~~~----------------~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 345 (472)
.+.... ........|.+|++.|. +...+.+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~----------------------------------~~~~~~~ 476 (612)
T 3gyr_A 431 EMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN----------------------------------DGLGFTI 476 (612)
T ss_dssp EEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT----------------------------------SCCCEEE
T ss_pred ccccccccccccccccceeeeccCCCccccccccCccCC----------------------------------CCcceEe
Confidence 000000 00001122333332221 1233578
Q ss_pred cCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCC----------------CCCCCcCCCCccceEEeCCCCEE
Q 012024 346 DYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSAS----------------RNQYNLRDAVARVTVQVYPKSWS 409 (472)
Q Consensus 346 ~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~----------------~~~~n~~~p~~rDTv~vp~~g~~ 409 (472)
+.|++|+|+|+|.+.+.||||||||+||||+++++.+.... ....+..++.|||||.|++++++
T Consensus 477 ~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v 556 (612)
T 3gyr_A 477 GEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGL 556 (612)
T ss_dssp ETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEE
T ss_pred CCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEE
Confidence 99999999999999999999999999999998765433210 11345567889999999999999
Q ss_pred EEEEE-ecCceeeEeeecchhHHhcccEEEEEEecCCc
Q 012024 410 AIYIA-LDNVGMWNLRSESWARQYLGQQFYLRVYTAST 446 (472)
Q Consensus 410 ~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 446 (472)
+|||+ +||||.||||||||+|||.|||+.|+|++++.
T Consensus 557 ~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 557 RVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred EEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 99998 79999999999999999999999999998865
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=4.8e-74 Score=594.47 Aligned_cols=366 Identities=19% Similarity=0.231 Sum_probs=266.5
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEeccc----chhhhcCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL----AFHKAAGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~ 77 (472)
.++|+|+++|+|||||+++. +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+++||+|+|||++
T Consensus 61 ~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~ 136 (488)
T 3od3_A 61 DIYNQLTEETTLHWHGLEVP--GEVDGGP--QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED 136 (488)
T ss_dssp EEEECSSSCBCCEEETCCCC--HHHHCCT--TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEEC
T ss_pred EEEeCCcCceeEeecccccC--cccCCCC--cCcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcC
Confidence 47999999999999999985 4699996 89999999999999997668999999997 5899999999999999
Q ss_pred CCCCCCCCCC--CCCccEEEEeccccCCHHHHHHHh--hcCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCC
Q 012024 78 RPRIPVPFPD--PAGDYTVLIGDWYKSNHTDLRAHL--DKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQN 153 (472)
Q Consensus 78 ~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~--~~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~ 153 (472)
+.+...+++. ..+|++|+|+||+++.++++.... ........+|.++|||+. .|.+.+ +|++|||||||+|+.+
T Consensus 137 ~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~ 214 (488)
T 3od3_A 137 DEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNAR 214 (488)
T ss_dssp HHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSC
T ss_pred ccccccCCcccCCccceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCc
Confidence 7654433332 356999999999997654321000 000113467999999997 467776 5689999999999999
Q ss_pred cEeEEE-eCceeEEEEeCCccc-cceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecC-----CCCceEEEEEEeC
Q 012024 154 SLNFRI-QNHKMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS-----TVLTTTGILHYSN 226 (472)
Q Consensus 154 ~~~~~i-~~h~~~via~DG~~~-~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~ 226 (472)
.+.|+| ++|+|+|||+||+++ +|..+++|.|+|||||||+|++++ .+.|+|++...... +......+++...
T Consensus 215 ~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~ 293 (488)
T 3od3_A 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQP 293 (488)
T ss_dssp CEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEE
T ss_pred eeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccCccceeEecc
Confidence 999999 699999999999987 899999999999999999999984 67899987543211 0011222333332
Q ss_pred CCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEeccc----------------cccc
Q 012024 227 SAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSS----------------AGQV 290 (472)
Q Consensus 227 ~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----------------~~~~ 290 (472)
...+....+|. .|.+.+..+... ...+|++.+... ....
T Consensus 294 ~~~~~~~~~P~------------------~L~~~~~~~~~~-------~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~ 348 (488)
T 3od3_A 294 IAISASGALPD------------------TLSSLPALPSLE-------GLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAM 348 (488)
T ss_dssp EEEECCCCCCS------------------CCCCCCCCCCCT-------TCCEEEEEEEECHHHHHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCCc------------------ccccCCCCcccc-------cccceEEEEEeccccccccccccccccccccc
Confidence 11001111111 111111100000 112444444210 0000
Q ss_pred -------------CCe-------------EeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEe
Q 012024 291 -------------NGK-------------QRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMG 344 (472)
Q Consensus 291 -------------~g~-------------~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 344 (472)
.|. ..|+|||++|.. ..|. +.
T Consensus 349 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~-~~~~--------------------------------~~ 395 (488)
T 3od3_A 349 AGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM-NKPM--------------------------------FA 395 (488)
T ss_dssp TTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT-TCCS--------------------------------EE
T ss_pred ccccccccccccccCccccccccccccccceeeECCeeCCC-CCCc--------------------------------eE
Confidence 110 138999999852 1221 46
Q ss_pred ecCCcEEEEEEEcCC-CCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEec----Cce
Q 012024 345 ADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALD----NVG 419 (472)
Q Consensus 345 ~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad----npG 419 (472)
++.|++|+|.|.|.+ .+.|||||||++|+|+++++.... ..++.|||||.|+ ++++.|+|++| +||
T Consensus 396 ~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G 466 (488)
T 3od3_A 396 AAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEH 466 (488)
T ss_dssp CCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGG
T ss_pred cCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCC
Confidence 789999999999988 578999999999999999764322 1236799999999 99999999975 578
Q ss_pred eeEeeecchhHHhcccEEEEEE
Q 012024 420 MWNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 420 ~w~~HCHil~H~d~GMm~~~~V 441 (472)
.||||||+|+|||.|||..|+|
T Consensus 467 ~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 467 AYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp CEEEEESSHHHHHTTCEEEEEC
T ss_pred CEEEeCCchHHHhcCCcEEEEC
Confidence 9999999999999999999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.7e-72 Score=596.99 Aligned_cols=383 Identities=14% Similarity=0.138 Sum_probs=269.7
Q ss_pred eeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEecccc----hhhhcCceeEEEEeCCCCCCCCCC
Q 012024 11 AFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRILSRPRIPVPFP 86 (472)
Q Consensus 11 tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~ 86 (472)
|+|||||+++.+ .+||++ ||+|+||++|+|+|++.+++||||||||.+ .|+++||+|+|||+++++.+.+++
T Consensus 128 tsiH~HG~~~~~--~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp 203 (612)
T 2g23_A 128 SVTHLHGAQTGG--GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLP 203 (612)
T ss_dssp BCEEEETCCCCT--TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCC
T ss_pred eEEEcCCCCCCC--ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcccccccCC
Confidence 999999999854 599995 899999999999999976899999999986 499999999999999765555556
Q ss_pred CCCCccEEEEeccccCCHHH--HHH-------Hhhc---C-C----CCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEc
Q 012024 87 DPAGDYTVLIGDWYKSNHTD--LRA-------HLDK---G-K----KLPLPDGILINGRGSGAAFNVEQGKTYRLRISNV 149 (472)
Q Consensus 87 ~~~~e~~l~l~d~~~~~~~~--~~~-------~~~~---~-~----~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~ 149 (472)
.+++|++|+|+||+++.+.+ +.. ++.. + . .+..+|.+||||+. .++++|++| +|||||||+
T Consensus 204 ~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~-~p~~~V~~g-~yRlRliNa 281 (612)
T 2g23_A 204 SGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI-WPYADVDDG-WYRLRLVNA 281 (612)
T ss_dssp CGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE-SCEEEEESS-EEEEEEEEC
T ss_pred CCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc-CCeEEecCC-eEEEEEEec
Confidence 78999999999999975421 100 0000 1 1 12568999999996 589999999 999999999
Q ss_pred cCCCcEeEEEeCc-------eeEEEEeCCccc-cceeee------EEEEcCCCeEEEEEEeCCCCC-ceEEEEeeeecCC
Q 012024 150 GLQNSLNFRIQNH-------KMKLVEVEGTHT-LQTTYS------SLDVHVGQSYSVLVTADQPAR-DYYIVVSSRFTST 214 (472)
Q Consensus 150 ~~~~~~~~~i~~h-------~~~via~DG~~~-~p~~~~------~l~l~~G~R~dv~v~~~~~~g-~y~i~~~~~~~~~ 214 (472)
|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+|||||||+|++++.+| +|+|+........
T Consensus 282 s~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~ 361 (612)
T 2g23_A 282 SNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPA 361 (612)
T ss_dssp CSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCT
T ss_pred CCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCC
Confidence 9999999999999 899999999999 699999 999999999999999997655 6888875421111
Q ss_pred C-------CceEEEEEEeCCCCC--CCCCCCCCCCccccccchh-hcccccCCCCCC---CCCCCCCCCCccccceeeEE
Q 012024 215 V-------LTTTGILHYSNSAGP--VSGPIPGGPTVQIDWSLNQ-ARSIRSNLTASG---PRPNPQGSYHYGLINTTKTI 281 (472)
Q Consensus 215 ~-------~~~~ail~y~~~~~~--~~~~~p~~p~~~~~~~~~~-~~~~~~~l~~~~---~~~~p~~~~~~~~~~~~~~~ 281 (472)
. .....+++++..... .+..+|.. +.. ...+...+.... ....|.. .+.....+.+
T Consensus 362 g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~--------L~~~~~~l~~~~~~~~r~~~~~~~~~---~~~~~~~~~~ 430 (612)
T 2g23_A 362 GTPDPLGGVRYPEVMEFRVRETCEEDSFALPEV--------LSGSFRRMSHDIPHGHRLIVLTPPGT---KGSGGHPEIW 430 (612)
T ss_dssp TSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSS--------CCSSCCCCCTTSCCEEEEEEECCTTC---TTSTTCCCEE
T ss_pred CccccccCccccceEEEEEccCCCCCCCCCChh--------hccccccCCcccccceeEEeeccccc---ccccccccee
Confidence 0 011246666543211 11122210 000 000000000000 0000000 0000000011
Q ss_pred Eecc-----------c----ccccCC-eEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEee
Q 012024 282 RLSS-----------S----AGQVNG-KQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGA 345 (472)
Q Consensus 282 ~~~~-----------~----~~~~~g-~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 345 (472)
.+.. . ....+| ...|+|||+.|... ..+.+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~----------------------------------~~~~v 476 (612)
T 2g23_A 431 EMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG----------------------------------LGFTI 476 (612)
T ss_dssp EEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC----------------------------------CCEEE
T ss_pred eccccccccccccccccceeeeccCCceeEEEECCccCCCC----------------------------------CceEe
Confidence 1100 0 000122 24578888877421 12467
Q ss_pred cCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCC----------------CCCCCcCCCCccceEEeCCCCEE
Q 012024 346 DYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSAS----------------RNQYNLRDAVARVTVQVYPKSWS 409 (472)
Q Consensus 346 ~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~----------------~~~~n~~~p~~rDTv~vp~~g~~ 409 (472)
+.|++|+|+|.|.+.+.|||||||+.|+|++++++.++... ....+..++.|||||.|+|++++
T Consensus 477 ~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~ 556 (612)
T 2g23_A 477 GEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGL 556 (612)
T ss_dssp ETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEE
T ss_pred cCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEE
Confidence 89999999999999899999999999999998754322100 01234456779999999999999
Q ss_pred EEEEEec-CceeeEeeecchhHHhcccEEEEEEecC
Q 012024 410 AIYIALD-NVGMWNLRSESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 410 ~irf~ad-npG~w~~HCHil~H~d~GMm~~~~V~~~ 444 (472)
+|+|+++ |||.|||||||++|||.|||..|+|...
T Consensus 557 ~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~ 592 (612)
T 2g23_A 557 RVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp EEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECH
T ss_pred EEEEEeCCCCccEEEEeCchhHhhcCCceEEEECch
Confidence 9999999 9999999999999999999999998644
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.9e-48 Score=439.30 Aligned_cols=339 Identities=13% Similarity=0.162 Sum_probs=233.2
Q ss_pred cccccccCCeeEeccCCCCC----CCCCCCCCCc---cCCCCCCCCeEEEEEEeCCc---------eeeeEEecccch--
Q 012024 2 SLTATSIRSAFANGNGIQNR----RNSFEDGVYG---TTCPIPPGKNFTYILQVKDQ---------IGSFYYFPSLAF-- 63 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~----~~~~~DGv~~---tq~~i~pG~~~~Y~~~~~~~---------~Gt~wYH~H~~~-- 63 (472)
.|+|.|+++|||||||++++ +.+|+||+++ |||+|+||++|+|+|+++++ +||||||||.+.
T Consensus 108 ~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~wYHsH~~~~~ 187 (1065)
T 2j5w_A 108 HLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPK 187 (1065)
T ss_dssp EEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEEEEECCSSHHH
T ss_pred EEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCceEEEEEeccCchh
Confidence 48999999999999999997 5688999884 79999999999999999754 699999999884
Q ss_pred hhhcCceeEEEEeCCCCCCCCCC-CCCCccEEEEe------ccccCCHHHHHHHh-hcCCC-------CCCCCeEEECCC
Q 012024 64 HKAAGGFGGIRILSRPRIPVPFP-DPAGDYTVLIG------DWYKSNHTDLRAHL-DKGKK-------LPLPDGILINGR 128 (472)
Q Consensus 64 q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~------d~~~~~~~~~~~~~-~~~~~-------~~~~d~~liNG~ 128 (472)
|+++||+|+|||+++.....|.+ ..|+|++|+|+ ||++.+.. ..++ ..+.. ...++.++|||+
T Consensus 188 qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~iNG~ 265 (1065)
T 2j5w_A 188 DIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNI--KTYCSEPEKVDKDNEDFQQSNRMYSVNGY 265 (1065)
T ss_dssp HHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHH--HHHCSCGGGCCTTCHHHHHHTEEEEETTE
T ss_pred HhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchh--hhhhcCccccccccccccccCcEEEECCc
Confidence 57899999999999765333322 45789999999 56654321 1111 11100 012357999998
Q ss_pred C--CCceEEEeCCcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEE
Q 012024 129 G--SGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYI 205 (472)
Q Consensus 129 ~--~~~~~~v~~g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i 205 (472)
. ..+.++|++|++|||||||+|.. ..+.|+|+||+|+ ++|..+++|.|+|||||||+|++++ +|+|+|
T Consensus 266 ~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~-pG~y~i 336 (1065)
T 2j5w_A 266 TFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN-PGEWML 336 (1065)
T ss_dssp ETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCS-CEEEEE
T ss_pred cCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCC-CeeEEE
Confidence 5 24689999999999999999986 6999999999999 3678899999999999999999985 799999
Q ss_pred EEeeeecCCCCceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCC------CCCCCCCCCccccceee
Q 012024 206 VVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGP------RPNPQGSYHYGLINTTK 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~------~~~p~~~~~~~~~~~~~ 279 (472)
++...... .....+.+++.+.....+.+.|..+. ... -+..++.+.|++.+... .+.+++++ ..
T Consensus 337 ~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~~-~~~-~~i~A~e~~wdy~~~~~~~~~~~~~~~~~s~-------~~ 406 (1065)
T 2j5w_A 337 SCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGKH-VRH-YYIAAEEIIWNYAPSGIDIFTKENLTAPGSD-------SA 406 (1065)
T ss_dssp EECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTSE-EEE-EEEEEEEEEEESCTTSBCTTTCCBTTCTTCT-------TH
T ss_pred EecCcchh-hCCCEEEEEEecCCCccccccccccc-eeE-EEEeceecccccCCCCcccccccccCCCccc-------ch
Confidence 98764211 12467888888665433333332211 111 13345566677665432 22333221 11
Q ss_pred EEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCC
Q 012024 280 TIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDE 359 (472)
Q Consensus 280 ~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~ 359 (472)
.+ +..+....+++..-.++ +.|.+ +.|..+. ...|.......-.+++.++.|++++++|.|..
T Consensus 407 ~~-l~~~~~~ig~~y~k~v~-~~y~d--------------~~f~~~~-~~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~ 469 (1065)
T 2j5w_A 407 VF-FEQGTTRIGGSYKKLVY-REYTD--------------ASFTNRK-ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKG 469 (1065)
T ss_dssp HH-HCCBTTBCCSEEEEEEE-EEESS--------------TTCCSBC-CCCGGGGGGTTSCCCEEEETTEEEEEEEEECS
T ss_pred hh-hccCCcccCceEeeeee-ecccC--------------CceEEcC-cCCcccccccccCceEEEeCCCEEEEEEEECC
Confidence 12 32222234455555555 45532 1222110 01111111122356889999999999999999
Q ss_pred CCCCCeeecCCceEEEEee
Q 012024 360 DIIQSYHLNGYQFWVVGMD 378 (472)
Q Consensus 360 ~~~HP~HlHG~~F~Vl~~~ 378 (472)
...|+||+||+.|++++.|
T Consensus 470 ~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 470 AYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp SSCBCCEEESSBCCGGGCS
T ss_pred CCCccCcccceeeeccCCC
Confidence 9999999999999987653
No 19
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1e-49 Score=432.98 Aligned_cols=199 Identities=13% Similarity=0.170 Sum_probs=150.5
Q ss_pred cccccccCCeeEeccCCCCC----CCCCCCCCC---ccCCCCCCCCeEEEEEEeCC---------ceeeeEEecccch--
Q 012024 2 SLTATSIRSAFANGNGIQNR----RNSFEDGVY---GTTCPIPPGKNFTYILQVKD---------QIGSFYYFPSLAF-- 63 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~----~~~~~DGv~---~tq~~i~pG~~~~Y~~~~~~---------~~Gt~wYH~H~~~-- 63 (472)
-|+|.|+++|||||||+++. +.+++||++ .|||+|+||++|+|+|++++ ++||||||||.+.
T Consensus 88 ~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~ 167 (742)
T 2r7e_A 88 TLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVK 167 (742)
T ss_dssp CEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHH
T ss_pred EEEECCCCCEeEEecCcccCccccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHH
Confidence 58999999999999999984 555666665 38999999999999999853 4699999999885
Q ss_pred hhhcCceeEEEEeCCCCCCCCCCCCCCccEEEEec------cccCCHHHHHHHhhcCCCCCCCCeEEECCCC--CCceEE
Q 012024 64 HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGD------WYKSNHTDLRAHLDKGKKLPLPDGILINGRG--SGAAFN 135 (472)
Q Consensus 64 q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~~~~~~ 135 (472)
|+++||+|+|||+++...........+|++|++++ |+++........+.........+.++|||+. ..+.++
T Consensus 168 q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~l~ 247 (742)
T 2r7e_A 168 DLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPGLI 247 (742)
T ss_dssp HHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CCSCCCCCCCCEETTBCTBCCCCCE
T ss_pred HhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCccccccCceEEECCccCCCCcceE
Confidence 89999999999999754221111123788888754 5554321110011111112235678999996 346899
Q ss_pred EeCCcEEEEEEEEccCCC-cEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEee
Q 012024 136 VEQGKTYRLRISNVGLQN-SLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSS 209 (472)
Q Consensus 136 v~~g~~~rlR~in~~~~~-~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~ 209 (472)
|++|++|||||||++... .+.|+|+||.|+|++. .+|++.|.||++++|+++++ .+|.|.+.+..
T Consensus 248 v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~ 313 (742)
T 2r7e_A 248 GCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--------RQASLEISPITFLTAQTLLM-DLGQFLLFCHI 313 (742)
T ss_dssp ECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE--------ECCSCCCCTTCCCEEEECCC-SCSEECCCCCS
T ss_pred EcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE--------ecceEEeCCCcEEEEEEEeC-CCeeEEEEeCC
Confidence 999999999999999875 7999999999999852 36788899999999999998 57888776553
No 20
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.4e-43 Score=367.46 Aligned_cols=354 Identities=16% Similarity=0.114 Sum_probs=230.2
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCCCCC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRI 81 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~ 81 (472)
.|+|.+....+|||||... .+||+|.||++++|+|++. ++||||||||...|+.+||+|.|+|+++...
T Consensus 68 ~~~N~~~~~h~~~~~g~~~----------~~~~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~ 136 (447)
T 2dv6_A 68 NLVNGEGAQHDVVVDQYAA----------RSAIVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRA 136 (447)
T ss_dssp EEECSSSSCBCCEETTTTE----------ECCCBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCC
T ss_pred EEEcCCCCceEEEEccCCc----------ccceecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccc
Confidence 3789988888999998631 1689999999999999995 6999999999999999999999999986542
Q ss_pred CCC--C---CCCCCccEEEEeccccCCHHH--HH-HHhhcC-CCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccC-
Q 012024 82 PVP--F---PDPAGDYTVLIGDWYKSNHTD--LR-AHLDKG-KKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGL- 151 (472)
Q Consensus 82 ~~~--~---~~~~~e~~l~l~d~~~~~~~~--~~-~~~~~~-~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~- 151 (472)
... + .....+++..+ |+....... +. ...... ......+.+++||+...|++++++|++|||||+|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~ 215 (447)
T 2dv6_A 137 EMKSSGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDS 215 (447)
T ss_dssp CCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTC
T ss_pred cCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCC
Confidence 210 0 00011111111 111100000 00 000000 0112346799999854589999999999999999985
Q ss_pred CCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeec--CCCCceEEEEEEeCCCC
Q 012024 152 QNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFT--STVLTTTGILHYSNSAG 229 (472)
Q Consensus 152 ~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~--~~~~~~~ail~y~~~~~ 229 (472)
...+.+++++. ++.||.. +.+.|.||||+++++++++ +|+||+++..... .......+.|.+....
T Consensus 216 ~~~~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~- 283 (447)
T 2dv6_A 216 LMVHSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPTHITNGMYGLLLVEPEG- 283 (447)
T ss_dssp SSCBCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHHHHHTTCEEEEEEECTT-
T ss_pred ceeEEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-
Confidence 34566666653 3689873 2345999999999999985 6999998864210 0012345777776542
Q ss_pred CCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCeeccCCCCc
Q 012024 230 PVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTP 309 (472)
Q Consensus 230 ~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p 309 (472)
.+|. ...+....+. ++..... . ...+. ..+.+... .......|.|||+.+....
T Consensus 284 ----~~P~-~d~~~~~~~~-----~~~~~~~--~-~~~g~---------~~~~~~~~--~~~~~~~~~iNG~~~~~~~-- 337 (447)
T 2dv6_A 284 ----GLPQ-VDREFYVMQG-----EIYTVKS--F-GTSGE---------QEMDYEKL--INEKPEYFLFNGSVGSLTR-- 337 (447)
T ss_dssp ----CSCC-CSEEEEEEEE-----EECBSSC--T-TCCEE---------CCBBHHHH--HTTCCSEEEETTSTTCCCC--
T ss_pred ----CCCC-CCeeEEEEec-----ccccCCc--c-ccccc---------ccCChHHh--hccCCCEEEECCcccCCCC--
Confidence 1221 0011100000 0110000 0 00000 00000000 0012246899998763110
Q ss_pred cccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCC-CCCCCeeecCCceEEEEeecCCCCCCCCC
Q 012024 310 LKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRN 388 (472)
Q Consensus 310 ~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~ 388 (472)
..++.++.|++++|+|.|.+ ...||||||||+|+||+++++..
T Consensus 338 ------------------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~------ 381 (447)
T 2dv6_A 338 ------------------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV------ 381 (447)
T ss_dssp ------------------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS------
T ss_pred ------------------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc------
Confidence 12367889999999999987 46899999999999999975421
Q ss_pred CCCcCCCC-ccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCC
Q 012024 389 QYNLRDAV-ARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 389 ~~n~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 445 (472)
..|. +|||+.|+++++++|+|++||||.|+||||+++|++.||++.++|..+.
T Consensus 382 ----~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 382 ----SPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp ----SCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred ----CCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 2244 7999999999999999999999999999999999999999999996553
No 21
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.4e-43 Score=349.52 Aligned_cols=105 Identities=11% Similarity=0.050 Sum_probs=85.3
Q ss_pred ecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEe---cCceee
Q 012024 345 ADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIAL---DNVGMW 421 (472)
Q Consensus 345 ~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a---dnpG~w 421 (472)
++.|++|+|+|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|++.+.+++.+ +|||.|
T Consensus 178 v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w 249 (313)
T 3tas_A 178 ATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAW 249 (313)
T ss_dssp EETTCEEEEEEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred cccCCEEEEEEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeE
Confidence 35688999999999988999999999999998764321 1234789999999999988777754 689999
Q ss_pred EeeecchhHHhcccEEEEEEecCCccccccCCCCccch
Q 012024 422 NLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNAR 459 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~ 459 (472)
+||||+++|++.|||..|+|.+++..+ ....|.+..
T Consensus 250 ~~HCHi~~H~~~GM~~~f~V~~~d~~~--p~~~p~~~~ 285 (313)
T 3tas_A 250 MYHCHVQSHSDMGMVGLFLVKKPDGTI--PGYDPHRHH 285 (313)
T ss_dssp EEEECSHHHHHTTCEEEEEEECTTCCC--TTCCTTCCB
T ss_pred EEEeCChHHHHCCCeEEEEEECCCCCC--CCCCccccc
Confidence 999999999999999999999887654 234554433
No 22
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=2.4e-43 Score=344.04 Aligned_cols=204 Identities=18% Similarity=0.279 Sum_probs=166.9
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccc---hhhhcCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLA---FHKAAGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~ 77 (472)
.|+|.+.++++|||||++ ..++||+|+ +||+|+||++++|+|++ +++||||||||.. .|+++||+|+|||++
T Consensus 79 ~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~ 154 (288)
T 3gdc_A 79 HFTNAGAHPHTIHFHGVH---RATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEP 154 (288)
T ss_dssp EEEECSSSCBCCEESSCC---CGGGSCCTTSTTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEEC
T ss_pred EEEeCCCCcccEEecccc---ccccCCCCCccceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeC
Confidence 579999999999999997 357999999 99999999999999999 6899999999987 799999999999999
Q ss_pred CCCCCCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeE
Q 012024 78 RPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNF 157 (472)
Q Consensus 78 ~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~ 157 (472)
+...+ ..++|++|+++||+.++
T Consensus 155 ~~~~~----~~d~e~~l~~~d~~~~~------------------------------------------------------ 176 (288)
T 3gdc_A 155 KEGRP----PADDEMVMVMNGYNTDG------------------------------------------------------ 176 (288)
T ss_dssp SSCCC----CCSEEEEEEEEEECCSS------------------------------------------------------
T ss_pred CccCC----CCcceEEEEEeeEecCC------------------------------------------------------
Confidence 76422 34688999998885320
Q ss_pred EEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCCCCceEEEEEEeCCCCCCCCCCCC
Q 012024 158 RIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPG 237 (472)
Q Consensus 158 ~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~ 237 (472)
| + .
T Consensus 177 -------------g----------------~---------------------------------------~--------- 179 (288)
T 3gdc_A 177 -------------G----------------D---------------------------------------D--------- 179 (288)
T ss_dssp -------------T----------------T---------------------------------------C---------
T ss_pred -------------C----------------C---------------------------------------C---------
Confidence 0 0 0
Q ss_pred CCCccccccchhhcccccCCCCCCCCCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccc
Q 012024 238 GPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFK 317 (472)
Q Consensus 238 ~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~ 317 (472)
+ ..|+|||+.|...
T Consensus 180 -~------------------------------------------------------~~~~iNG~~~~~~----------- 193 (288)
T 3gdc_A 180 -N------------------------------------------------------EFYSVNGLPFHFM----------- 193 (288)
T ss_dssp -C------------------------------------------------------SEEEETTSTTHHH-----------
T ss_pred -c------------------------------------------------------ceEEECccccccc-----------
Confidence 0 0245666655210
Q ss_pred cCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCCCC--CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCC
Q 012024 318 IGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDI--IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDA 395 (472)
Q Consensus 318 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p 395 (472)
...++++.|++|+|.|.|.+.. .|||||||+.|+|++.+.. +..|
T Consensus 194 ----------------------~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~ 240 (288)
T 3gdc_A 194 ----------------------DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPS 240 (288)
T ss_dssp ----------------------HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCS
T ss_pred ----------------------CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCC
Confidence 0014568899999999999853 5999999999999975431 2336
Q ss_pred CccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEec
Q 012024 396 VARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYT 443 (472)
Q Consensus 396 ~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 443 (472)
.++||+.|+|++.+.|+|++++||.|+||||+++|++.|||..|+|.+
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred ceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 899999999999999999999999999999999999999999999863
No 23
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.1e-42 Score=343.50 Aligned_cols=220 Identities=19% Similarity=0.289 Sum_probs=179.9
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhh---hcCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHK---AAGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~ 77 (472)
.|+|.+.++++|||||+++.+++++||+|+ +||+|+||++|+|+|++ +++||||||||...+. ++||+|+|||++
T Consensus 47 ~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~ 125 (318)
T 3g5w_A 47 NVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEP 125 (318)
T ss_dssp EEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEEC
T ss_pred EEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcC
Confidence 489999999999999999988889999999 99999999999999999 5899999999987543 589999999998
Q ss_pred CCCCCCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCC--CceEEEeCCcEEEEEEEEccCCCcE
Q 012024 78 RPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS--GAAFNVEQGKTYRLRISNVGLQNSL 155 (472)
Q Consensus 78 ~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--~~~~~v~~g~~~rlR~in~~~~~~~ 155 (472)
+...+.+. ..++|++|+|+||+++..... ...+.....++.++|||+.. ...+++++|++|||||+|++.. .+
T Consensus 126 ~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~-~h 200 (318)
T 3g5w_A 126 KNPLPIEK-TVTKDYILMLSDWVSSWANKP---GEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDH-VH 200 (318)
T ss_dssp SSCCHHHH-TCCEEEEEEEEEECGGGTTCT---TCCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSS-CE
T ss_pred CCcccccc-cccceeEEEEEeecccccccc---ccCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCc-eE
Confidence 65322111 458899999999987643211 01122234578999999962 2349999999999999999975 79
Q ss_pred eEEEeCceeEEEEeCCccc-cceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCC-----CCceEEEEEEeCCC
Q 012024 156 NFRIQNHKMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTST-----VLTTTGILHYSNSA 228 (472)
Q Consensus 156 ~~~i~~h~~~via~DG~~~-~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~ 228 (472)
.|+|+||.|+||+.||.++ +|...+++.|.||||+||+++++ .+|.|.+.+....-.. .....++|+|++..
T Consensus 201 ~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 201 AIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999998 78899999999999999999998 5899988876542211 13456889998754
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=2.6e-43 Score=345.11 Aligned_cols=95 Identities=14% Similarity=0.073 Sum_probs=78.9
Q ss_pred eecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEE---EEEEecCcee
Q 012024 344 GADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSA---IYIALDNVGM 420 (472)
Q Consensus 344 ~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~---irf~adnpG~ 420 (472)
.++.|++|+|+|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|++... ++|+++|||.
T Consensus 193 ~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~ 264 (299)
T 3t9w_A 193 EANLGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGM 264 (299)
T ss_dssp EEETTCEEEEEEEEESSCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTCSEE
T ss_pred eecCCCEEEEEEEeccccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCCCee
Confidence 346689999999999988999999999999988865432 22235689999999987654 4556789999
Q ss_pred eEeeecchhHHhcccEEEEEEecCCc
Q 012024 421 WNLRSESWARQYLGQQFYLRVYTAST 446 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V~~~~~ 446 (472)
|+||||+++|++.|||..|+|.+.+.
T Consensus 265 w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 265 WMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 99999999999999999999987754
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=7.2e-44 Score=402.07 Aligned_cols=373 Identities=12% Similarity=0.073 Sum_probs=230.2
Q ss_pred CCeeEeccCCCCCC-CCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCCCCCCCCCC
Q 012024 9 RSAFANGNGIQNRR-NSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFP 86 (472)
Q Consensus 9 ~~tsiHwHG~~~~~-~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~ 86 (472)
..+.+||||++|.+ ++|+||++. | |+|.||.+|+|+|.+ +++||||||||+..|+.+||+|.|+|++......+..
T Consensus 649 ~g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~ 726 (1065)
T 2j5w_A 649 AGNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDST 726 (1065)
T ss_dssp CCSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCC
T ss_pred CCCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-CCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCcc
Confidence 45679999999999 999999998 7 999999999999999 5899999999999999999999999998754333433
Q ss_pred CCCCccEEEE----eccccCCHHHHHHHh-h-cCCCCCCCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEe
Q 012024 87 DPAGDYTVLI----GDWYKSNHTDLRAHL-D-KGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQ 160 (472)
Q Consensus 87 ~~~~e~~l~l----~d~~~~~~~~~~~~~-~-~~~~~~~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~ 160 (472)
.++.|.+++| +||++.+...+...+ . .+. .+..+++|+... .+ |++|++ ..-+.+.
T Consensus 727 ~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~~n~~~~--~i----G~tY~k---------~~y~~~~ 788 (1065)
T 2j5w_A 727 FYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAFLDKGEF--YI----GSKYKK---------VVYRQYT 788 (1065)
T ss_dssp CCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTTTCCTTT--CC----CSEEEE---------EEEEEES
T ss_pred CCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---CccceeecCCCc--cc----cceEee---------eEEEEEc
Confidence 6678899999 899998765443211 1 121 266777888742 22 899998 3456789
Q ss_pred CceeEE----------EEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeec---CC--C-C---ceEEE
Q 012024 161 NHKMKL----------VEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFT---ST--V-L---TTTGI 221 (472)
Q Consensus 161 ~h~~~v----------ia~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~---~~--~-~---~~~ai 221 (472)
+|+|++ +++|| ..|.+.+|+|++|.++-+ .+..|.|....... .. . . ..+.+
T Consensus 789 d~tft~~~~r~~~~~~v~~pG--------P~I~v~~Gd~v~v~l~N~-~~~~~sih~HGl~~~~~~~~~i~PG~~~ty~~ 859 (1065)
T 2j5w_A 789 DSTFRVPVERKAEEEHLGILG--------PQLHADVGDKVKIIFKNM-ATRPYSIHAHGVQTESSTVTPTLPGETLTYVW 859 (1065)
T ss_dssp STTCCSBCCCCGGGGGGTTSC--------CCEEEETTEEEEEEEEEC-SSSCBCCEESSCBCSCSCCCCBCTTCEEEEEE
T ss_pred CCcceecccCCccccccCCCC--------CEEEEecCCEEEEEEEeC-CCCCceEeeccccccCCCCceeCCCCeEEEEE
Confidence 999987 55565 579999999999999865 45667776543110 00 0 1 11222
Q ss_pred EEEeCCCCCCCCCCCCCCCcccccc---chh----hcccc--cCCCCCCCCCCCCCCCCccccceeeEEEecccccccCC
Q 012024 222 LHYSNSAGPVSGPIPGGPTVQIDWS---LNQ----ARSIR--SNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNG 292 (472)
Q Consensus 222 l~y~~~~~~~~~~~p~~p~~~~~~~---~~~----~~~~~--~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g 292 (472)
+.++... +.+..|....-|. ... ...+. ....+..... +.+ .+ ...+..+.+.... .+.
T Consensus 860 ~~~~~~g-----p~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~-~~~-~~---~d~D~~l~~~~~d--~~~ 927 (1065)
T 2j5w_A 860 KIPERSG-----AGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK-VFN-PR---RKLEFALLFLVFD--ENE 927 (1065)
T ss_dssp ECCGGGS-----CCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC------C-CC---CEEEEEEEEEEEE--GGG
T ss_pred EecCccC-----CccccCCceEEEEecCCChHHhhhccccceeEecCccccc-ccC-CC---cceEEEEEEEeec--CCc
Confidence 2221111 1111110000000 000 00000 0000000000 000 00 0122222221000 000
Q ss_pred eEeEEEcCeeccC--CCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEcCC--CCCCCeeec
Q 012024 293 KQRYAINSVSFIP--ADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDE--DIIQSYHLN 368 (472)
Q Consensus 293 ~~~~~iNg~~f~~--p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~--~~~HP~HlH 368 (472)
......|+.+|.. +..+++...+......+..|. ........+.++.|++|+|+|.|.+ ...||||||
T Consensus 928 ~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~iNG--------~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlH 999 (1065)
T 2j5w_A 928 SWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAING--------RMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFH 999 (1065)
T ss_dssp STTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETT--------BCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEES
T ss_pred ceeeccCcccccCCccccCcchhhhhccCceEEECC--------ccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEc
Confidence 0000112222221 111221100000000011110 0011233467899999999999985 468999999
Q ss_pred CCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhcccEEEEEEecCCc
Q 012024 369 GYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTAST 446 (472)
Q Consensus 369 G~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 446 (472)
||.|+|++++ |.|||||.|+++++++|||++||||.|+||||+++|++.|||+.|+|.+.+.
T Consensus 1000 G~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1000 GHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp SCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred ccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 9999999763 6789999999999999999999999999999999999999999999986643
No 26
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.3e-42 Score=336.91 Aligned_cols=97 Identities=13% Similarity=0.122 Sum_probs=82.4
Q ss_pred EeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEec---Cce
Q 012024 343 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALD---NVG 419 (472)
Q Consensus 343 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad---npG 419 (472)
+.++.|++|+|+|.|.+.+.|||||||+.|+|++.| .++.. ...+.+|||+.|.|++++.++|+++ |||
T Consensus 170 i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G--~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG 241 (276)
T 3kw8_A 170 FEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTG--ILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAG 241 (276)
T ss_dssp EEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSS--SCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred EEEecCCEEEEEEecCCCcceeEEEccceeEEeccC--ccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCC
Confidence 356789999999999988899999999999997643 22211 1124689999999999999999997 899
Q ss_pred eeEeeecchhHHhcccEEEEEEecCCcc
Q 012024 420 MWNLRSESWARQYLGQQFYLRVYTASTS 447 (472)
Q Consensus 420 ~w~~HCHil~H~d~GMm~~~~V~~~~~~ 447 (472)
.|+||||+++|++.|||..|+|.+++.+
T Consensus 242 ~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 242 AWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred eEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 9999999999999999999999887664
No 27
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=4.2e-42 Score=342.87 Aligned_cols=220 Identities=18% Similarity=0.319 Sum_probs=178.8
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccch--hhh-cCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAF--HKA-AGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~ 77 (472)
-|+|.+.++++|||||+++.+++||||+|+ +||+|+||++|+|+|++ +++||||||||... |+. +||+|+|||++
T Consensus 48 ~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p 126 (339)
T 2zwn_A 48 NVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDP 126 (339)
T ss_dssp EEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEEC
T ss_pred EEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecC
Confidence 478999999999999999999999999998 99999999999999999 58999999999875 888 99999999998
Q ss_pred CCCCCCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCCC--ceEEEeCCcEEEEEEEEccCCCcE
Q 012024 78 RPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSG--AAFNVEQGKTYRLRISNVGLQNSL 155 (472)
Q Consensus 78 ~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~--~~~~v~~g~~~rlR~in~~~~~~~ 155 (472)
+.....+. ..++|++++|+||++...... -..+.....++.++|||+..+ ..+++++|++|||||+|++.. .+
T Consensus 127 ~~~~~~~~-~~d~e~~l~l~d~~~~~~~~~---~~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~-~h 201 (339)
T 2zwn_A 127 KQPLPIEK-RVTKDVIMMMSTWESAVADKY---GEGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGG-IH 201 (339)
T ss_dssp SSCCTTGG-GCSEEEEEEEEEECGGGTTCT---TCCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSS-CE
T ss_pred CCcccccc-cCCceEEEEeeheeccccccc---CCCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCc-eE
Confidence 65422211 347899999999987421110 001112235789999999632 349999999999999999965 99
Q ss_pred eEEEeCceeEEEEeCCcccc-ceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeec---C--CCCceEEEEEEeCCC
Q 012024 156 NFRIQNHKMKLVEVEGTHTL-QTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFT---S--TVLTTTGILHYSNSA 228 (472)
Q Consensus 156 ~~~i~~h~~~via~DG~~~~-p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~---~--~~~~~~ail~y~~~~ 228 (472)
.|+|+||+|+||+.||.+++ |..++++.|.||||+||+|+++ .+|.|.+.+....- + ......++|+|++..
T Consensus 202 ~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 202 AMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 99999999999999999995 7889999999999999999998 47888887765431 1 223457899998654
No 28
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.1e-39 Score=325.06 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=80.0
Q ss_pred eecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEe---cCcee
Q 012024 344 GADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIAL---DNVGM 420 (472)
Q Consensus 344 ~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a---dnpG~ 420 (472)
.++.|++|+|+|.|.+.+.||||||||.|+|+.. |.+.. ....+.||||+.|+|++++.|+|++ +|||.
T Consensus 212 ~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~ 283 (343)
T 3cg8_A 212 EATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGA 283 (343)
T ss_dssp EEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEE
T ss_pred EeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCee
Confidence 4577999999999998889999999999999743 32221 1123578999999999999999995 89999
Q ss_pred eEeeecchhHHhcccEEEEEEecCCc
Q 012024 421 WNLRSESWARQYLGQQFYLRVYTAST 446 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V~~~~~ 446 (472)
|+||||+++|++.|||..|.|.+++.
T Consensus 284 w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 284 WMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEeCCCHHHHhccCcEEEEEecCCC
Confidence 99999999999999999999986643
No 29
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2.2e-39 Score=321.65 Aligned_cols=210 Identities=20% Similarity=0.301 Sum_probs=173.6
Q ss_pred ccccccc--CCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEeccc---chhhhcCceeEEEEe
Q 012024 2 SLTATSI--RSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL---AFHKAAGGFGGIRIL 76 (472)
Q Consensus 2 ~~~n~l~--~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~ 76 (472)
.|+|.+. .+++|||||+.+ +||++. +..|.||++|+|+|++ +++||||||||. ..|+++||+|+|||+
T Consensus 83 ~~~N~~~~~~~~~ih~HG~~~-----~dG~~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~ 155 (327)
T 1kbv_A 83 EFSNNPSSTVPHNVDFHAATG-----QGGGAA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVE 155 (327)
T ss_dssp EEEECTTCSSCBCCEETTCCS-----GGGGTT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEE
T ss_pred EEEECCCCCCceeeEeCcccc-----CCCCCc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEe
Confidence 4689987 589999999953 799886 2359999999999999 579999999996 589999999999999
Q ss_pred CCCCCCCCCCCCCCccEEEEeccccCCHHH--------HHHHhhcCCCCCCCCeEEECCCCCC----ceEEEeCCcEEEE
Q 012024 77 SRPRIPVPFPDPAGDYTVLIGDWYKSNHTD--------LRAHLDKGKKLPLPDGILINGRGSG----AAFNVEQGKTYRL 144 (472)
Q Consensus 77 ~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~d~~liNG~~~~----~~~~v~~g~~~rl 144 (472)
+++. .+.+|+|++|+++||+++.... +.... ...++.++|||+... +.+++++|++|||
T Consensus 156 ~~~~----~p~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRl 226 (327)
T 1kbv_A 156 PKEG----LPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV-----AEQPEYVVFNGHVGALTGDNALKAKAGETVRM 226 (327)
T ss_dssp CTTC----CCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH-----HTCCSEEEETTSTTTTSGGGCEEEETTEEEEE
T ss_pred cCCC----CCCCceEEEEEeeeeeccCccccccccccChhHhc-----cCCCceEEEcCcccCCCCceeEEeCCCCEEEE
Confidence 8642 2246889999999999875210 11111 135689999999742 4699999999999
Q ss_pred EEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCCCCceEEEEEE
Q 012024 145 RISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHY 224 (472)
Q Consensus 145 R~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y 224 (472)
||||+|..+.+.|+|+||+|+||+.||.+++|..++++.|+||||+||+|++++ +|+|+|++............|+|+|
T Consensus 227 RliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~~~~g~~a~l~~ 305 (327)
T 1kbv_A 227 YVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAFNKGALGQLKV 305 (327)
T ss_dssp EEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHHHSSCEEEEEE
T ss_pred EEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEeccccccccCCcEEEEEE
Confidence 999999989999999999999999999999999999999999999999999994 7999999876443112346899999
Q ss_pred eCCC
Q 012024 225 SNSA 228 (472)
Q Consensus 225 ~~~~ 228 (472)
.+..
T Consensus 306 ~g~~ 309 (327)
T 1kbv_A 306 EGAE 309 (327)
T ss_dssp ESCC
T ss_pred CCCC
Confidence 8765
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.4e-36 Score=314.21 Aligned_cols=210 Identities=18% Similarity=0.229 Sum_probs=174.3
Q ss_pred ccccccc--CCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEeccc---chhhhcCceeEEEEe
Q 012024 2 SLTATSI--RSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL---AFHKAAGGFGGIRIL 76 (472)
Q Consensus 2 ~~~n~l~--~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~ 76 (472)
.|+|.+. .+++|||||+++ +||++.+ .+|+||++|+|+|++ +++||||||||. ..|+.+||+|+|||+
T Consensus 73 ~~~N~l~~~~~~~iH~HG~~~-----~dG~~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~ 145 (442)
T 2zoo_A 73 NLSNHPSSKMPHNIDLHAVTG-----PGGGAES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVE 145 (442)
T ss_dssp EEEECTTCSSCBCCEETTCCS-----GGGGGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEE
T ss_pred EEEECCCCCCCCCEEecCCcC-----CCCCCcc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEe
Confidence 4789986 499999999974 7898762 269999999999999 589999999974 589999999999999
Q ss_pred CCCCCCCCCCCCCCccEEEEeccccCCHHH--------HHHHhhcCCCCCCCCeEEECCCCCC----ceEEEeCCcEEEE
Q 012024 77 SRPRIPVPFPDPAGDYTVLIGDWYKSNHTD--------LRAHLDKGKKLPLPDGILINGRGSG----AAFNVEQGKTYRL 144 (472)
Q Consensus 77 ~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~d~~liNG~~~~----~~~~v~~g~~~rl 144 (472)
+++.. +.+++|++|+++||++..... +.. + ...+++.++|||+... +.+++++|++|||
T Consensus 146 ~~~~~----~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~liNG~~~~~~~~~~l~v~~G~~vrl 216 (442)
T 2zoo_A 146 PKEGL----APVDREYYLVQGDFYTKGEFGEAGLQPFDMAK-A----IDEDADYVVFNGSVGSTTDENSLTAKVGETVRL 216 (442)
T ss_dssp CTTCC----CCCSEEEEEEEEEECBSSCTTCCEEECBCHHH-H----HTTCCSEEEETTSTTTTSGGGCEEEETTCEEEE
T ss_pred CCCCC----CCCCceEEEEeeeeeccCcccccccccCChhH-h----ccCCCCEEEECCCcCCCCCCCceEeCCCCEEEE
Confidence 86532 245899999999999875310 110 1 1246799999999732 5799999999999
Q ss_pred EEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCCCCceEEEEEE
Q 012024 145 RISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHY 224 (472)
Q Consensus 145 R~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y 224 (472)
||+|+|....+.|+|+||+|+||+.||.+++|..++++.|.||||+||+|+++ .+|+|++++............++|+|
T Consensus 217 rliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v 295 (442)
T 2zoo_A 217 YIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKV 295 (442)
T ss_dssp EEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEE
T ss_pred EEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEe
Confidence 99999998999999999999999999999999999999999999999999999 47999999865433112356899999
Q ss_pred eCCC
Q 012024 225 SNSA 228 (472)
Q Consensus 225 ~~~~ 228 (472)
.+..
T Consensus 296 ~~~~ 299 (442)
T 2zoo_A 296 EGPD 299 (442)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 8765
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=4.5e-36 Score=324.13 Aligned_cols=216 Identities=12% Similarity=0.149 Sum_probs=155.5
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCc-c--------CCCCCCCCeEEEEEEeCCc-----ee----eeEEecccc-
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYG-T--------TCPIPPGKNFTYILQVKDQ-----IG----SFYYFPSLA- 62 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-t--------q~~i~pG~~~~Y~~~~~~~-----~G----t~wYH~H~~- 62 (472)
-|+|.|.++|||||||+++. ++|||+|+ + ||+|+||++|+|+|+++++ +| |||||||.+
T Consensus 82 ~~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~ 159 (647)
T 1sdd_B 82 RFKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNP 159 (647)
T ss_dssp EECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSH
T ss_pred EEEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCC
Confidence 48999999999999999984 57999997 6 9999999999999999754 57 999999985
Q ss_pred -hhhhcCceeEEEEeCCCCCCC--CCCCCCCccEEEEe------ccccCCHHHHHHHhhcCCCCCCCCeEEECCCC-CCc
Q 012024 63 -FHKAAGGFGGIRILSRPRIPV--PFPDPAGDYTVLIG------DWYKSNHTDLRAHLDKGKKLPLPDGILINGRG-SGA 132 (472)
Q Consensus 63 -~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~~~ 132 (472)
.|+++||+|+|||+++..... ..+..++|++|+|+ ||+++.................++.++|||+. ..+
T Consensus 160 ~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p 239 (647)
T 1sdd_B 160 EKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLP 239 (647)
T ss_dssp HHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSSCCC
T ss_pred cccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEecCCC
Confidence 799999999999999754211 12234689999999 78876543210000001113457899999996 247
Q ss_pred eEEEeCCcEEEEEEEEccCCC-cEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeee
Q 012024 133 AFNVEQGKTYRLRISNVGLQN-SLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRF 211 (472)
Q Consensus 133 ~~~v~~g~~~rlR~in~~~~~-~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~ 211 (472)
.++|++|++|||||+|++... .+.|+++||.|+||+.|| ..++++.|.||||+||+|++++ +|.|.+.+....
T Consensus 240 ~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-pG~w~~hch~~~ 313 (647)
T 1sdd_B 240 GLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-PGWWLLDTEVGE 313 (647)
T ss_dssp CCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-SEEEEEECCCHH
T ss_pred CeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-ceEeecccCccc
Confidence 899999999999999999874 899999999999999986 4679999999999999999985 688887765432
Q ss_pred cCCCCceEEEEEEeC
Q 012024 212 TSTVLTTTGILHYSN 226 (472)
Q Consensus 212 ~~~~~~~~ail~y~~ 226 (472)
- ......+++.+..
T Consensus 314 h-~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 314 I-QRAGMQTPFLIVD 327 (647)
T ss_dssp H-HTTTCEEEEEEEC
T ss_pred c-cccccccceeeec
Confidence 1 1122345555543
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2.7e-35 Score=293.79 Aligned_cols=215 Identities=18% Similarity=0.217 Sum_probs=163.8
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccc----hhhhcCceeEEEEe
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRIL 76 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~ 76 (472)
.|+|.+ +++||||+++.+.+++||++. +| |+||++|+|+|++ +++||||||||.+ .|+++||+|+|||+
T Consensus 78 ~~~N~~---~~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~ 151 (336)
T 1oe1_A 78 TLVNPA---TNAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVL 151 (336)
T ss_dssp EEEECT---TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEE
T ss_pred EEEcCC---CCCccccceECCCCCCCCCcceEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEe
Confidence 367775 468999999888778888776 65 9999999999999 5799999999975 69999999999999
Q ss_pred CCCCCC----CCCCCCCCccEEEEeccccCC--HHHHH----------HHhhcCCCCCCCCeEEECCCCC----CceEEE
Q 012024 77 SRPRIP----VPFPDPAGDYTVLIGDWYKSN--HTDLR----------AHLDKGKKLPLPDGILINGRGS----GAAFNV 136 (472)
Q Consensus 77 ~~~~~~----~~~~~~~~e~~l~l~d~~~~~--~~~~~----------~~~~~~~~~~~~d~~liNG~~~----~~~~~v 136 (472)
++...+ .+. .+|+|++|+++||++.. .+.+. ..+.. .....++.++|||+.. .+.++|
T Consensus 152 ~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~~~~l~v 229 (336)
T 1oe1_A 152 PRDGLKDPQGKPL-HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTGANALTA 229 (336)
T ss_dssp CTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEE
T ss_pred cCcCCcccccCcc-cCCceeEeeeeeeeeccccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCCCcceEc
Confidence 865321 122 45889999999999852 11110 00000 0124678999999973 378999
Q ss_pred eCCcEEEEEEEEccCCCcEeEE-EeCceeEEEEeCCcccccee--eeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecC
Q 012024 137 EQGKTYRLRISNVGLQNSLNFR-IQNHKMKLVEVEGTHTLQTT--YSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS 213 (472)
Q Consensus 137 ~~g~~~rlR~in~~~~~~~~~~-i~~h~~~via~DG~~~~p~~--~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~ 213 (472)
++|++|| |+|++..+.+.|+ |++|.++|++ ||.+++|.. ++++.|++|||+||+|++++ +|+|++.+......
T Consensus 230 ~~GervR--lin~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~ 305 (336)
T 1oe1_A 230 KVGETVL--LIHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA 305 (336)
T ss_dssp ETTCEEE--EEEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH
T ss_pred CCCCEEE--EEecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc
Confidence 9999766 5677776666655 5999999997 999997753 68999999999999999995 79999988764321
Q ss_pred CCCceEEEEEEeCCC
Q 012024 214 TVLTTTGILHYSNSA 228 (472)
Q Consensus 214 ~~~~~~ail~y~~~~ 228 (472)
......|+++|.+..
T Consensus 306 ~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 306 FELGAAGHIKVEGKW 320 (336)
T ss_dssp HTTSCEEEEEEESCC
T ss_pred ccCCCeEEEEECCCC
Confidence 123567899998765
No 33
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.1e-34 Score=286.90 Aligned_cols=215 Identities=18% Similarity=0.163 Sum_probs=161.0
Q ss_pred ccccccCCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccc-----hhhhcCceeEEEEe
Q 012024 3 LTATSIRSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLA-----FHKAAGGFGGIRIL 76 (472)
Q Consensus 3 ~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~ 76 (472)
|+|. .+++||||+++.+...+||.+. +| |+||++|+|+|++ +++||||||||.+ .|+++||+|+|||+
T Consensus 78 ~~N~---~~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~ 151 (333)
T 1mzy_A 78 LINP---PENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVL 151 (333)
T ss_dssp EEEC---TTCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEE
T ss_pred EEEC---CCCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEc
Confidence 5677 5899999999876555666665 64 9999999999999 5899999999986 69999999999999
Q ss_pred CCCCCC----CCCCCCCCccEEEEeccccCC--HHHH----------HHHhhcCCCCCCCCeEEECCCCC----CceEEE
Q 012024 77 SRPRIP----VPFPDPAGDYTVLIGDWYKSN--HTDL----------RAHLDKGKKLPLPDGILINGRGS----GAAFNV 136 (472)
Q Consensus 77 ~~~~~~----~~~~~~~~e~~l~l~d~~~~~--~~~~----------~~~~~~~~~~~~~d~~liNG~~~----~~~~~v 136 (472)
++...+ .++ .+|+|++|+++||++.. +..+ ...+... ....++.++|||+.. .+.++|
T Consensus 152 ~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~~~~~~l~v 229 (333)
T 1mzy_A 152 PRDGLKDHEGKPV-RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGALTGEGALKA 229 (333)
T ss_dssp CTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTTSGGGCEEE
T ss_pred cCcCccccccCCC-ccchheeeeeeeeccCccccccccccccccccccchhHHh-hccCCcEEEECCcccccCCCcceEe
Confidence 764321 122 45889999999999831 1111 0000000 125678999999962 256999
Q ss_pred eCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccc-e-eeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCC
Q 012024 137 EQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ-T-TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTST 214 (472)
Q Consensus 137 ~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p-~-~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~ 214 (472)
++|++||||++|++....+. .+++|.++||+ ||.++++ . .++++.|.||||+||+|++++ +|+|++.+.......
T Consensus 230 ~~Ger~Rl~n~~~~~~~~~h-~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~ 306 (333)
T 1mzy_A 230 KVGDNVLFVHSQPNRDSRPH-LIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAV 306 (333)
T ss_dssp ETTCEEEEEEEESSSCBCEE-EETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHH
T ss_pred cCCCEEEEEECCCCCccccE-EECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhHh
Confidence 99998887766655433333 37889999999 9999965 3 479999999999999999995 799999887643211
Q ss_pred CCceEEEEEEeCCC
Q 012024 215 VLTTTGILHYSNSA 228 (472)
Q Consensus 215 ~~~~~ail~y~~~~ 228 (472)
.....++++|.+..
T Consensus 307 ~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 307 HKGATAHVLVEGEW 320 (333)
T ss_dssp TTCCEEEEEEESCC
T ss_pred hCCCEEEEEEcCCC
Confidence 23567899998754
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=5.5e-36 Score=294.50 Aligned_cols=188 Identities=11% Similarity=0.155 Sum_probs=137.6
Q ss_pred cccccccCCeeEeccCCC----CCCCCCCCCCCc-c--CCCCCCCCeEEEEEEeCCc---------eeeeEEecccch--
Q 012024 2 SLTATSIRSAFANGNGIQ----NRRNSFEDGVYG-T--TCPIPPGKNFTYILQVKDQ---------IGSFYYFPSLAF-- 63 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~----~~~~~~~DGv~~-t--q~~i~pG~~~~Y~~~~~~~---------~Gt~wYH~H~~~-- 63 (472)
-|+|.+.+++||||||++ +.+.+++||++. + ||+|+||++|+|+|+++++ +||||||||...
T Consensus 73 ~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~ 152 (306)
T 1sdd_A 73 HFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVE 152 (306)
T ss_dssp EEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHH
T ss_pred EEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCceEEEEeccCCchh
Confidence 489999999999999999 445555565554 3 7999999999999999644 479999999775
Q ss_pred hhhcCceeEEEEeCCCCC---CCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCCC--CceEEEeC
Q 012024 64 HKAAGGFGGIRILSRPRI---PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS--GAAFNVEQ 138 (472)
Q Consensus 64 q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--~~~~~v~~ 138 (472)
|+++||+|+|||+++... +.+. ..++|++|+++||....+ . ....++.++|||+.. .|.+++++
T Consensus 153 q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--------~--~~~~~~~~~ING~~~~~~p~l~v~~ 221 (306)
T 1sdd_A 153 DFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--------W--NQTSSLMYTVNGYVNGTMPDITVCA 221 (306)
T ss_dssp HHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--------S--SCCCCEEECSSSCCSSCCCCCCCCC
T ss_pred hhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--------c--ccCCCcceeeCCEecCCCcceEEcC
Confidence 889999999999986421 1222 457899999999843211 0 113467899999962 37899999
Q ss_pred CcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEee
Q 012024 139 GKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSS 209 (472)
Q Consensus 139 g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~ 209 (472)
|+++||||+|++.. ..+.|+++||.|.+ || ..++++.|.||||+||+|+++ .+|.|++.+..
T Consensus 222 G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v~~~~~-~pG~~~~hch~ 284 (306)
T 1sdd_A 222 HDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTANMTVS-PEGRWTIASLI 284 (306)
T ss_dssp C------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC---------CCCCCBCCS
T ss_pred CCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEEEEEcC-CCeEEEEEeCC
Confidence 99999999999987 57789999999875 87 357999999999999999998 57888887653
No 35
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.6e-34 Score=288.68 Aligned_cols=215 Identities=18% Similarity=0.176 Sum_probs=158.8
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccc----hhhhcCceeEEEEe
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRIL 76 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~ 76 (472)
-|+|.+ +++||||+++.+....||+.. +| |.||++|+|+|++. ++||||||||.+ .|+++||+|+|||+
T Consensus 84 ~~~N~~---~~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~ 157 (340)
T 2bw4_A 84 RLINPD---TNTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVL 157 (340)
T ss_dssp EEEECT---TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEE
T ss_pred EEEeCC---CCCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEEEEEEc
Confidence 367887 789999999876554555444 54 99999999999995 799999999975 69999999999999
Q ss_pred CCCCCC----CCCCCCCCccEEEEeccccC--CHHHH----------HHHhhcCCCCCCCCeEEECCCCC----CceEEE
Q 012024 77 SRPRIP----VPFPDPAGDYTVLIGDWYKS--NHTDL----------RAHLDKGKKLPLPDGILINGRGS----GAAFNV 136 (472)
Q Consensus 77 ~~~~~~----~~~~~~~~e~~l~l~d~~~~--~~~~~----------~~~~~~~~~~~~~d~~liNG~~~----~~~~~v 136 (472)
+++..+ .+. .+++|++|+++||++. .++.+ ...+.. .....++.++|||+.. .+.++|
T Consensus 158 ~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~~~~~l~v 235 (340)
T 2bw4_A 158 PRDGLKDEKGQPL-TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALTGDHALTA 235 (340)
T ss_dssp CTBCEECTTSCEE-CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEE
T ss_pred cCcCcccccCCCc-CcceeEEEeeeeeeeccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCccCCCceEc
Confidence 865311 122 4588999999999983 21111 000000 0124678999999962 278999
Q ss_pred eCCcEEEEEEEEccCCCcEeEE-EeCceeEEEEeCCccccc-e-eeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecC
Q 012024 137 EQGKTYRLRISNVGLQNSLNFR-IQNHKMKLVEVEGTHTLQ-T-TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS 213 (472)
Q Consensus 137 ~~g~~~rlR~in~~~~~~~~~~-i~~h~~~via~DG~~~~p-~-~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~ 213 (472)
++|+++||+++|. .+.+.++ +++|.++|++ ||.++.+ . .++++.|.||||+||+|++++ +|+|++.+......
T Consensus 236 ~~G~r~Rl~n~~~--~~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h 311 (340)
T 2bw4_A 236 AVGERVLVVHSQA--NRDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA 311 (340)
T ss_dssp ETTCEEEEEEEES--SSCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH
T ss_pred CCCCEEEEEECCC--CCccceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH
Confidence 9999877655554 4444444 7899999997 9998854 3 479999999999999999995 79999998765311
Q ss_pred CCCceEEEEEEeCCC
Q 012024 214 TVLTTTGILHYSNSA 228 (472)
Q Consensus 214 ~~~~~~ail~y~~~~ 228 (472)
......++++|.+..
T Consensus 312 ~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 312 FELGAAGHFKVTGEW 326 (340)
T ss_dssp HTTSCEEEEEEESCC
T ss_pred HhCCCEEEEEECCCC
Confidence 122456889998754
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=5.4e-34 Score=310.13 Aligned_cols=199 Identities=12% Similarity=0.117 Sum_probs=157.4
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCC---------ceeeeEEecccch--hhhcCce
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKD---------QIGSFYYFPSLAF--HKAAGGF 70 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~---------~~Gt~wYH~H~~~--q~~~Gl~ 70 (472)
.|+|.+.+++||||||+++..+.+ ||++++||+|+||++|+|+|++++ ++||||||||.+. |+++||+
T Consensus 212 ~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~GL~ 290 (770)
T 2r7e_B 212 TFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLI 290 (770)
T ss_dssp EEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTSCC
T ss_pred EEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCCce
Confidence 489999999999999999987753 699999999999999999999974 8999999999885 8999999
Q ss_pred eEEEEeCCCCCCC--CCCCCCCccEEEEec------cccCCHHHHHHHhh-cCC-------CCCCCCeEEECCCC--CCc
Q 012024 71 GGIRILSRPRIPV--PFPDPAGDYTVLIGD------WYKSNHTDLRAHLD-KGK-------KLPLPDGILINGRG--SGA 132 (472)
Q Consensus 71 G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~-~~~-------~~~~~d~~liNG~~--~~~ 132 (472)
|+|||+++..... ..+..++|++|++++ |+++... ..++. ... .....+.++|||+. ..+
T Consensus 291 G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~~~~ 368 (770)
T 2r7e_B 291 GPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFKENYRFHAINGYIMDTLP 368 (770)
T ss_dssp EEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSSTTTSCEECTTSCTTTTCC
T ss_pred eeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCccccccCCccccCCccCCCCC
Confidence 9999999753211 112457888888743 5554221 00000 000 01124568999996 346
Q ss_pred eEEEeCCcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEee
Q 012024 133 AFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSS 209 (472)
Q Consensus 133 ~~~v~~g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~ 209 (472)
.++|++|++|||||+|++.. ..+.|+|+||.|+|++.||. .+|++.|.||||++|+|+++ .+|.|.+.+..
T Consensus 369 ~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~ 440 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KAGIWRVECLI 440 (770)
T ss_dssp CCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SCBCCCBCCCS
T ss_pred CeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CCCceEEEecc
Confidence 79999999999999999865 48999999999999999973 78999999999999999998 57888776654
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.97 E-value=8.2e-31 Score=271.54 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=167.8
Q ss_pred ccccccc--CCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccc---hhhhcCceeEEEE
Q 012024 2 SLTATSI--RSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLA---FHKAAGGFGGIRI 75 (472)
Q Consensus 2 ~~~n~l~--~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV 75 (472)
.|.|.+. ..++|||||+.+ +||++. +| |.||++++|.|++ +++||||||||.. .|+.+||+|+|+|
T Consensus 208 rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v 279 (447)
T 2dv6_A 208 HLKNHKDSLMVHSVDFHGATG-----PGGAAAFTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLV 279 (447)
T ss_dssp EEEECTTCSSCBCCEETTCCS-----GGGGGGGCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEE
T ss_pred EEEeCCCCceeEEEeeccccC-----CCCCCccEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEE
Confidence 3688875 579999999853 799987 54 9999999999999 4789999999964 7899999999999
Q ss_pred eCCCCCCCCCCCCCCccEEEEeccccCCHH--------HHHHHhhcCCCCCCCCeEEECCCCCC----ceEEEeCCcEEE
Q 012024 76 LSRPRIPVPFPDPAGDYTVLIGDWYKSNHT--------DLRAHLDKGKKLPLPDGILINGRGSG----AAFNVEQGKTYR 143 (472)
Q Consensus 76 ~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~--------~~~~~~~~~~~~~~~d~~liNG~~~~----~~~~v~~g~~~r 143 (472)
+++.. . +.+++|++++++||++.... .+.... ...++.++|||+... +.+++++|++||
T Consensus 280 ~~~~~--~--P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vr 350 (447)
T 2dv6_A 280 EPEGG--L--PQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLI-----NEKPEYFLFNGSVGSLTRSHPLYASVGETVR 350 (447)
T ss_dssp ECTTC--S--CCCSEEEEEEEEEECBSSCTTCCEECCBBHHHHH-----TTCCSEEEETTSTTCCCCCCCEEECTTCEEE
T ss_pred eCCCC--C--CCCCeeEEEEecccccCCcccccccccCChHHhh-----ccCCCEEEECCcccCCCCCcceEECCCCEEE
Confidence 98642 2 24578899999999875321 011111 134678999999632 379999999999
Q ss_pred EEEEEccCCCcEeEEEeCceeEEEEeCCccccce--eeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeecCCCCceEEE
Q 012024 144 LRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQT--TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGI 221 (472)
Q Consensus 144 lR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~--~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ai 221 (472)
|||+|++....+.|+|+||.|+||+.||.++++. ..+++.|.||||++|+|+++ .+|.|+|++...... .....++
T Consensus 351 lrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~-~~Gm~~~ 428 (447)
T 2dv6_A 351 IFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRL-EHGLVGF 428 (447)
T ss_dssp EEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGG-GGTCCEE
T ss_pred EEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCcc-ccCCEEE
Confidence 9999999888999999999999999999999665 48999999999999999998 579999998764321 1235789
Q ss_pred EEEeCCC
Q 012024 222 LHYSNSA 228 (472)
Q Consensus 222 l~y~~~~ 228 (472)
++|.+..
T Consensus 429 ~~v~~~~ 435 (447)
T 2dv6_A 429 LNVDGPK 435 (447)
T ss_dssp EEECSCS
T ss_pred EEEeCCC
Confidence 9997654
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.97 E-value=5e-32 Score=294.27 Aligned_cols=195 Identities=18% Similarity=0.189 Sum_probs=149.6
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCC-----CCc-cCCCCCCCCeEEEEEEeCCcee---------eeEEecccc--hh
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDG-----VYG-TTCPIPPGKNFTYILQVKDQIG---------SFYYFPSLA--FH 64 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DG-----v~~-tq~~i~pG~~~~Y~~~~~~~~G---------t~wYH~H~~--~q 64 (472)
.++|.+++++||||||+++. ++|+|| ++. +||+|+||++|+|+|++++++| |||||||.. .|
T Consensus 465 ~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d~~~gT~wYHsH~~~~~q 543 (742)
T 2r7e_A 465 IFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERD 543 (742)
T ss_dssp CEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSSCSCCCCEEECCSSSSST
T ss_pred EEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccCCCceEEEEecCcchhhh
Confidence 58999999999999999984 677765 566 8999999999999999976554 999999987 47
Q ss_pred hhcCceeEEEEeCCCCC-C--CCCCCCCCccEEEEec------cccCCHHHHHHHhhc-C-CCC------CCCCeEEECC
Q 012024 65 KAAGGFGGIRILSRPRI-P--VPFPDPAGDYTVLIGD------WYKSNHTDLRAHLDK-G-KKL------PLPDGILING 127 (472)
Q Consensus 65 ~~~Gl~G~liV~~~~~~-~--~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~-~-~~~------~~~d~~liNG 127 (472)
+++||+|+|||+++... + .+. ..|+|++|++++ |++.. .+..+... . ... .....++|||
T Consensus 544 ~~~GL~G~lIV~~~~~~~~~~~~~-~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~~~~~~~~~~~~~~ING 620 (742)
T 2r7e_A 544 LASGLIGPLLICYKESVDQRGNQI-MSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQLEDPEFQASNIMHSING 620 (742)
T ss_dssp GGGSCCEECCCBCCCSCCCCCCSS-CCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCCCCHHHHGGGCCBCTTT
T ss_pred hhccceeeEEEcCccccccccCcC-CCCceEEEEeecccccccccccc--chhhcccCchhcccccccccccCceeeecC
Confidence 89999999999986421 1 122 458899999965 44321 11111110 0 000 0112478999
Q ss_pred CC--CCceEEEeCCcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceE
Q 012024 128 RG--SGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYY 204 (472)
Q Consensus 128 ~~--~~~~~~v~~g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~ 204 (472)
+. .. .+.+++|++|||||+|++.. ..+.|+|+||.|+|+ +..+|+|.|.||||++|+|.++ .+|.|.
T Consensus 621 ~~~~~~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~~~v~~~ad-~pG~w~ 690 (742)
T 2r7e_A 621 YVFDSL-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSGETVFMSME-NPGLWI 690 (742)
T ss_dssp TCSSCC-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSSEECCEECC-CCCCSC
T ss_pred cCCCCC-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcEEEEEEEcC-CCeEEE
Confidence 85 33 48999999999999998764 568999999999986 5678999999999999999998 579998
Q ss_pred EEEeee
Q 012024 205 IVVSSR 210 (472)
Q Consensus 205 i~~~~~ 210 (472)
+.+...
T Consensus 691 ~hcH~~ 696 (742)
T 2r7e_A 691 LGCHNS 696 (742)
T ss_dssp CEECCC
T ss_pred EEeCCc
Confidence 877653
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=1.1e-28 Score=245.78 Aligned_cols=245 Identities=17% Similarity=0.156 Sum_probs=166.0
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEe---CCccccceeeeEEEEcCCCeEEEEEEe
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEV---EGTHTLQTTYSSLDVHVGQSYSVLVTA 196 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~---DG~~~~p~~~~~l~l~~G~R~dv~v~~ 196 (472)
...+++||+...|+|++++|+++|+||+|.+.. . .+|+.|-+.+.+. ||.+. ++...|.||||+++.+++
T Consensus 23 ~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~-~--~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~ 95 (339)
T 2zwn_A 23 YKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSL-P--HTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKA 95 (339)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEEESSS-C--BCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEEECCccCCCeEEEECCCEEEEEEEECCCC-C--ccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEEC
Confidence 357999999656899999999999999999864 3 4555666777765 99863 344579999999999999
Q ss_pred CCCCCceEEEEeeeecCC-C-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccc
Q 012024 197 DQPARDYYIVVSSRFTST-V-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGL 274 (472)
Q Consensus 197 ~~~~g~y~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 274 (472)
+ .+|+||..+......+ . ....+.+....... ..++.....++...+. ++.... ...+...
T Consensus 96 ~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~~d~e~~l~l~-----d~~~~~-~~~~~~~------- 158 (339)
T 2zwn_A 96 D-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKRVTKDVIMMMS-----TWESAV-ADKYGEG------- 158 (339)
T ss_dssp C-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGGCSEEEEEEEE-----EECGGG-TTCTTCC-------
T ss_pred C-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---ccccccCCceEEEEee-----heeccc-ccccCCC-------
Confidence 8 5899999876432111 1 12233333332211 0111100011111111 011100 0000000
Q ss_pred cceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEE
Q 012024 275 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 354 (472)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~v 354 (472)
. . .......|.|||+.|.. ...+.++.|++++|+
T Consensus 159 -g--------~---~~~~~~~~~ING~~~~~----------------------------------~~~~~v~~G~~vrlr 192 (339)
T 2zwn_A 159 -G--------T---PMNVADYFSVNAKSFPL----------------------------------TQPLRVKKGDVVKIR 192 (339)
T ss_dssp -C--------S---TTSCCCEEEETTBCTTS----------------------------------SCCEEECTTCEEEEE
T ss_pred -C--------C---CccccceEEEccccCCC----------------------------------cccEEECCCCEEEEE
Confidence 0 0 00112368999987621 112567899999999
Q ss_pred EEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhH----
Q 012024 355 FQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWAR---- 430 (472)
Q Consensus 355 i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H---- 430 (472)
|.|.+...||||||||.|+|++.++. ++.+|.++||+.|++++++.|+|++|+||.|+||||+++|
T Consensus 193 liN~~~~~h~~hlhGh~f~vi~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~ 262 (339)
T 2zwn_A 193 FFGAGGGIHAMHSHGHDMLVTHKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAG 262 (339)
T ss_dssp EEECSSSCEEEEETTCCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBT
T ss_pred EEeCCCceEEEEECCcEEEEEEeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccc
Confidence 99999889999999999999998653 2234788999999999999999999999999999999999
Q ss_pred --HhcccEEEEEEecC
Q 012024 431 --QYLGQQFYLRVYTA 444 (472)
Q Consensus 431 --~d~GMm~~~~V~~~ 444 (472)
++.|||+.+++...
T Consensus 263 ~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 263 GKHPGGPITVIEYDGV 278 (339)
T ss_dssp TBSSCSSEEEEEETTS
T ss_pred cccCCCcEEEEEECCC
Confidence 78999999988643
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=6.2e-28 Score=238.04 Aligned_cols=246 Identities=16% Similarity=0.168 Sum_probs=167.0
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeE-EEEeCCccccceeeeEEEEcCCCeEEEEEEeCCC
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK-LVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 199 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~-via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~ 199 (472)
..+++||+...|+|+++.|+++++|+.|.... ...++.+|.... ..+.||.+. +....|.||++++..++++ .
T Consensus 23 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~-~ 96 (318)
T 3g5w_A 23 HTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE-P 96 (318)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-S
T ss_pred EEEEECCccCCceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-C
Confidence 57899999777999999999999999998754 678888887543 236898754 2345789999999999997 5
Q ss_pred CCceEEEEeeeecCCC--CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccce
Q 012024 200 ARDYYIVVSSRFTSTV--LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINT 277 (472)
Q Consensus 200 ~g~y~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 277 (472)
+|+||.........+. ....+.|.+..... .+++.....++...+. ++....... .... ..
T Consensus 97 ~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~d~e~~l~l~-----dw~~~~~~~-~~~~--------~~ 159 (318)
T 3g5w_A 97 AGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTVTKDYILMLS-----DWVSSWANK-PGEG--------GI 159 (318)
T ss_dssp CEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTCCEEEEEEEE-----EECGGGTTC-TTCC--------CC
T ss_pred CEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccccceeEEEEE-----eeccccccc-cccC--------CC
Confidence 8999987654321100 12334444443221 0000000011111111 011000000 0000 00
Q ss_pred eeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEc
Q 012024 278 TKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN 357 (472)
Q Consensus 278 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N 357 (472)
.......|.|||+.|.. ...+.++.|++|+|+|.|
T Consensus 160 -----------~~~~~d~~~ING~~~~~----------------------------------~~~l~v~~G~~vrlrliN 194 (318)
T 3g5w_A 160 -----------PGDVFDYYTINAKSFPE----------------------------------TQPIRVKKGDVIRLRLIG 194 (318)
T ss_dssp -----------TTCCCCEEEETTBCBTS----------------------------------SCCEEECTTCEEEEEEEE
T ss_pred -----------CCCcCcEEEEcCcCCCC----------------------------------CccEEeCCCCEEEEEEEe
Confidence 00012368999987621 112567899999999999
Q ss_pred CCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHh-----
Q 012024 358 DEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQY----- 432 (472)
Q Consensus 358 ~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d----- 432 (472)
.+...||||||||.|+|++++++. +.+|.+|||+.|.|++++.|+|+++|||.|+||||+++|++
T Consensus 195 ~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~ 264 (318)
T 3g5w_A 195 AGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKP 264 (318)
T ss_dssp CSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBS
T ss_pred CCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcC
Confidence 988889999999999999986532 23478999999999999999999999999999999999998
Q ss_pred -cccEEEEEEecC
Q 012024 433 -LGQQFYLRVYTA 444 (472)
Q Consensus 433 -~GMm~~~~V~~~ 444 (472)
.|||..+++...
T Consensus 265 ~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 265 DGGIMTTIEYEEV 277 (318)
T ss_dssp SCBSEEEEEETTT
T ss_pred CCCCEEEEEECCC
Confidence 589999998644
No 41
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.88 E-value=6.7e-24 Score=208.34 Aligned_cols=232 Identities=14% Similarity=0.070 Sum_probs=137.3
Q ss_pred EEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCcccc----ceeeeEEEEcCCCeEEEEEEeCC
Q 012024 123 ILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL----QTTYSSLDVHVGQSYSVLVTADQ 198 (472)
Q Consensus 123 ~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~----p~~~~~l~l~~G~R~dv~v~~~~ 198 (472)
.++||.. .|+|++++|+++|+||+|... ..+.++.+|..+. .+.||.+.. +.......|.||||++..+++++
T Consensus 52 ~~~n~~p-GP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 52 SRTSGLL-GPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CSSCCSC-CCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccCCcc-CCEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 4689875 589999999999999999764 5777777776642 268998762 12233577999999999999976
Q ss_pred CC---------CceEEEEeeeec---CCCCceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCC
Q 012024 199 PA---------RDYYIVVSSRFT---STVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNP 266 (472)
Q Consensus 199 ~~---------g~y~i~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p 266 (472)
.. |+||........ ...+.+ ++|.+..... .....+.....++...+. .
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~-~~~~~~~~~d~e~~l~~~-------d---------- 189 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTL-TEDGTQKMFEKQHVLMFA-------V---------- 189 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCB-CTTSSBSSSCCCCCCBCC-------E----------
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceE-EEEEccCCCC-CccCCcCcccceEEEEEE-------e----------
Confidence 43 699998764221 112222 3444432210 000000000000000000 0
Q ss_pred CCCCCccccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeec
Q 012024 267 QGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 346 (472)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 346 (472)
+.-..+. .......|.|||+.|.. .| .+.++
T Consensus 190 --------------~d~~~~~-~~~~~~~~~ING~~~~~--~p--------------------------------~l~v~ 220 (306)
T 1sdd_A 190 --------------FDESKSW-NQTSSLMYTVNGYVNGT--MP--------------------------------DITVC 220 (306)
T ss_dssp --------------EETTSSS-SCCCCEEECSSSCCSSC--CC--------------------------------CCCCC
T ss_pred --------------ccccccc-ccCCCcceeeCCEecCC--Cc--------------------------------ceEEc
Confidence 0000000 00112357899987631 11 13568
Q ss_pred CCcEEEEEEEcCCCC--CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEee
Q 012024 347 YRAFIEIVFQNDEDI--IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLR 424 (472)
Q Consensus 347 ~g~~ve~vi~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~H 424 (472)
.|++++|.|.|.+.. .||||+||+.|++ .| .++||+.|.|++.+.|+|++++||.|+||
T Consensus 221 ~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~h 281 (306)
T 1sdd_A 221 AHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIA 281 (306)
T ss_dssp CC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCB
T ss_pred CCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEE
Confidence 899999999999864 6999999999986 11 35899999999999999999999999999
Q ss_pred ecchhHHhcccEEEEEEecC
Q 012024 425 SESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 425 CHil~H~d~GMm~~~~V~~~ 444 (472)
||+++|++.|||..|+|.+.
T Consensus 282 ch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 282 SLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CCSTTTGGGTCBCCC-----
T ss_pred eCChHHHhcCCeEEEEEecC
Confidence 99999999999999998644
No 42
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.86 E-value=3.2e-21 Score=208.04 Aligned_cols=242 Identities=14% Similarity=0.123 Sum_probs=146.2
Q ss_pred CCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccc----eeeeEEEEcCCCeEEEEEEeCCC-----C
Q 012024 130 SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ----TTYSSLDVHVGQSYSVLVTADQP-----A 200 (472)
Q Consensus 130 ~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p----~~~~~l~l~~G~R~dv~v~~~~~-----~ 200 (472)
..|+|++++|+++++||.|.... ...++.+|.... .+.||.+... ..+....|.||++++..+++++. +
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 45899999999999999999864 677777776654 5789987532 22345679999999999999864 4
Q ss_pred C----ceEEEEeeeec---CCCCceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcc-cccCCCCCCCCCCCCCCCCc
Q 012024 201 R----DYYIVVSSRFT---STVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARS-IRSNLTASGPRPNPQGSYHY 272 (472)
Q Consensus 201 g----~y~i~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~-~~~~l~~~~~~~~p~~~~~~ 272 (472)
| .||........ ...+.+ ++|.............|. ...++...+..... ..+.+... ...
T Consensus 145 G~~c~T~wYHsH~~~~~q~~~GL~G-~lIV~~~~~~~~~~~~~~-~~~e~~l~l~~~d~~~~w~~~~~-----~~~---- 213 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKDIHSGLIG-PLLICRKGTLDKETNMPV-DMREFVLLFMVFDEKKSWYYDKK-----PTR---- 213 (647)
T ss_dssp SCSEEEEEEECCSSHHHHHTTTCEE-EEEEECTTSSCTTSCCCS-SCCEEEEEEEEEEGGGSSCCC--------------
T ss_pred CCCceEEEEccCCCCcccccccCcc-CEEEeeCCCcccccCCCC-cceeEEEEEEeecCccccccccC-----ccc----
Confidence 7 89988765321 112222 333333221110000111 00111111110000 01111000 000
Q ss_pred cccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEE
Q 012024 273 GLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIE 352 (472)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve 352 (472)
... .+.. ........+.|||+.|. .| .+.++.|++|+
T Consensus 214 ---~~~---~~~~--~~~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~vr 250 (647)
T 1sdd_B 214 ---SWR---RASS--EVKNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEWVR 250 (647)
T ss_dssp ------------------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCEEE
T ss_pred ---ccc---cCCc--chhhcCceeccCCEecC---CC--------------------------------CeEEcCCCEEE
Confidence 000 0000 00112346889998761 11 14678899999
Q ss_pred EEEEcCCC--CCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhH
Q 012024 353 IVFQNDED--IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWAR 430 (472)
Q Consensus 353 ~vi~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H 430 (472)
|+|.|.+. ..||||+|||.|+|++.+ +.++||+.|.|++.+.|+|++++||.|+||||+++|
T Consensus 251 lrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h 314 (647)
T 1sdd_B 251 LHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEI 314 (647)
T ss_dssp EEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHH
T ss_pred EEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcccc
Confidence 99999875 479999999999998652 457999999999999999999999999999999999
Q ss_pred HhcccEEEEEEec
Q 012024 431 QYLGQQFYLRVYT 443 (472)
Q Consensus 431 ~d~GMm~~~~V~~ 443 (472)
++.|||..|.|.+
T Consensus 315 ~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 315 QRAGMQTPFLIVD 327 (647)
T ss_dssp HTTTCEEEEEEEC
T ss_pred cccccccceeeec
Confidence 9999999999963
No 43
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.85 E-value=1.6e-20 Score=186.07 Aligned_cols=245 Identities=16% Similarity=0.110 Sum_probs=162.0
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCC
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 199 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~ 199 (472)
..+++||+...|+|++++|+++|+|++|.... ..+.++++|.. +.||... ...|.|||++++.+++++
T Consensus 59 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~~- 127 (327)
T 1kbv_A 59 RYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKALQ- 127 (327)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECCS-
T ss_pred EEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECCC-
Confidence 57899999767999999999999999999753 56778887753 5788643 124899999999999985
Q ss_pred CCceEEEEeeeec-CCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccce
Q 012024 200 ARDYYIVVSSRFT-STV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINT 277 (472)
Q Consensus 200 ~g~y~i~~~~~~~-~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 277 (472)
+|.||........ .+. ....+.+.+.... .+|. ...+....+. ++...... .. .+ ...
T Consensus 128 ~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~-----~~p~-~d~e~~l~~~-----d~~~~~~~--~~-~g-----~~~- 187 (327)
T 1kbv_A 128 PGLYIYHCAVAPVGMHIANGMYGLILVEPKE-----GLPK-VDKEFYIVQG-----DFYTKGKK--GA-QG-----LQP- 187 (327)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC-CSEEEEEEEE-----EECBSSCT--TC-CE-----EEC-
T ss_pred CeEEEEEeCCCChhhhhhcceEEEEEEecCC-----CCCC-CceEEEEEee-----eeeccCcc--cc-cc-----ccc-
Confidence 7999998653210 000 1123333333322 1221 1111100010 11111100 00 00 000
Q ss_pred eeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEc
Q 012024 278 TKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN 357 (472)
Q Consensus 278 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N 357 (472)
+.+..... .....+.|||+.+... ....+.++.|++++|.|.|
T Consensus 188 ---~~~~~~~~--~~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~~vRlRliN 230 (327)
T 1kbv_A 188 ---FDMDKAVA--EQPEYVVFNGHVGALT--------------------------------GDNALKAKAGETVRMYVGN 230 (327)
T ss_dssp ---BCHHHHHH--TCCSEEEETTSTTTTS--------------------------------GGGCEEEETTEEEEEEEEE
T ss_pred ---cChhHhcc--CCCceEEEcCcccCCC--------------------------------CceeEEeCCCCEEEEEEEC
Confidence 00000000 1123678999875210 0123578899999999999
Q ss_pred CCC-CCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHH-hccc
Q 012024 358 DED-IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQ-YLGQ 435 (472)
Q Consensus 358 ~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~-d~GM 435 (472)
.+. ..|+||||||.|+|++.+++.. .|.++||+.|.+++.+.|.|++++||.|++|||+++|. ..||
T Consensus 231 ~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~ 299 (327)
T 1kbv_A 231 GGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGA 299 (327)
T ss_dssp EESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSC
T ss_pred CCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCc
Confidence 874 6799999999999999977522 26789999999999999999999999999999999995 8899
Q ss_pred EEEEEEecC
Q 012024 436 QFYLRVYTA 444 (472)
Q Consensus 436 m~~~~V~~~ 444 (472)
++.++|...
T Consensus 300 ~a~l~~~g~ 308 (327)
T 1kbv_A 300 LGQLKVEGA 308 (327)
T ss_dssp EEEEEEESC
T ss_pred EEEEEECCC
Confidence 999998644
No 44
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.85 E-value=1.2e-20 Score=188.16 Aligned_cols=257 Identities=13% Similarity=0.092 Sum_probs=155.4
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccC-CCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCC
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGL-QNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 198 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~-~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~ 198 (472)
...+++||+...|+|++++|+++|+|++|... ...+.+++++... +.||..+ . .|.|||++++.+++++
T Consensus 59 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~~~~y~~~~~~ 128 (340)
T 2bw4_A 59 IHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGEETTLRFKATK 128 (340)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEEEEEEEECCS
T ss_pred EEEEEECCCCCCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCCEEEEEEECCC
Confidence 45789999965689999999999999999873 2456666666432 2233322 1 3999999999999985
Q ss_pred CCCceEEEEeeeec--CCC-CceEEEEEEeCCCC-CCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCC-cc
Q 012024 199 PARDYYIVVSSRFT--STV-LTTTGILHYSNSAG-PVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYH-YG 273 (472)
Q Consensus 199 ~~g~y~i~~~~~~~--~~~-~~~~ail~y~~~~~-~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~~ 273 (472)
+|.||........ .+. ....+.|....... ......|.....++...+. ++.+.. .+.+.+. +.
T Consensus 129 -~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~-----D~~~~~-----~~~g~~~~~~ 197 (340)
T 2bw4_A 129 -PGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQ-----DFYVPK-----DEAGNYKKYE 197 (340)
T ss_dssp -CEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEE-----EECCCB-----CTTSCBCCCC
T ss_pred -CeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeee-----eeeecc-----ccCCcccccc
Confidence 8999998764210 010 12233333332211 0000011100001100000 111100 0000000 00
Q ss_pred cc--ceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEE
Q 012024 274 LI--NTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFI 351 (472)
Q Consensus 274 ~~--~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 351 (472)
.. ..... +... .......|.|||+.|.... ...+.++.|+++
T Consensus 198 ~~~~~~~~~--~~~~--~~~~~~~~~iNG~~~~~~~--------------------------------~~~l~v~~G~r~ 241 (340)
T 2bw4_A 198 TPGEAYEDA--VKAM--RTLTPTHIVFNGAVGALTG--------------------------------DHALTAAVGERV 241 (340)
T ss_dssp SHHHHHHHH--HHHH--HTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCEE
T ss_pred cccccccch--hhHh--hcCCCCEEEECCccCCccC--------------------------------CCceEcCCCCEE
Confidence 00 00000 0000 0001236899998763110 122577899999
Q ss_pred EEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCC--ccceEEeCCCCEEEEEEEecCceeeEeeecch-
Q 012024 352 EIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV--ARVTVQVYPKSWSAIYIALDNVGMWNLRSESW- 428 (472)
Q Consensus 352 e~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~~irf~adnpG~w~~HCHil- 428 (472)
+|++.|.+...|++|+|||.|+|++. |.+ .+++ ++||+.|.+++.+.|.|.+++||.|+||||++
T Consensus 242 Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~----------~~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~ 309 (340)
T 2bw4_A 242 LVVHSQANRDTRPHLIGGHGDYVWAT--GKF----------RNPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLI 309 (340)
T ss_dssp EEEEEESSSCBCEEEETCCEEEEETT--CCT----------TSCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred EEEECCCCCccceEEecCcceEEeCC--Ccc----------cCCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchH
Confidence 99888877788999999999999962 322 1133 47999999999999999999999999999999
Q ss_pred hHHhcccEEEEEEecCC
Q 012024 429 ARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 429 ~H~d~GMm~~~~V~~~~ 445 (472)
+|++.|||+.|+|....
T Consensus 310 ~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 310 EAFELGAAGHFKVTGEW 326 (340)
T ss_dssp HHHTTSCEEEEEEESCC
T ss_pred HHHhCCCEEEEEECCCC
Confidence 59999999999997543
No 45
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.82 E-value=6.3e-19 Score=175.16 Aligned_cols=260 Identities=11% Similarity=0.040 Sum_probs=148.9
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCC
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 198 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~ 198 (472)
...+++||+...|+|++++|+++++|++|.+.. ..+-+++++.. ..||. .+. . .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~--~~~--~--~i~PG~~~~y~f~~~- 120 (333)
T 1mzy_A 52 LQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGG--GGL--T--LINPGEKVVLRFKAT- 120 (333)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGG--GGG--C--CBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCC--Cce--e--EeCCCCEEEEEEECC-
Confidence 357899999767899999999999999999642 23333333321 12222 122 1 389999999999997
Q ss_pred CCCceEEEEeeee----cCCCCceEEEEEEeCCCCCCCCCCCCCCC-ccccccchhhcccccCCCCCCCCCCCCCCCC-c
Q 012024 199 PARDYYIVVSSRF----TSTVLTTTGILHYSNSAGPVSGPIPGGPT-VQIDWSLNQARSIRSNLTASGPRPNPQGSYH-Y 272 (472)
Q Consensus 199 ~~g~y~i~~~~~~----~~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~ 272 (472)
.+|.||....... ........+.+........ ..+.+ .|. .+.+..+. .. ++.+... ..+.+. +
T Consensus 121 ~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~-~~~~~-~p~~~d~e~~l~-l~--D~~~~~~-----~~g~~~~~ 190 (333)
T 1mzy_A 121 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGL-KDHEG-KPVRYDTVYYIG-ES--DHYIPKD-----EDGTYMRF 190 (333)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCC-BCTTS-CBCCCSEEEEEE-EE--EECCCBC-----TTSCBCCC
T ss_pred CCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCc-ccccc-CCCccchheeee-ee--eeccCcc-----cccccccc
Confidence 4899999876531 0000123343333322210 00110 010 01110000 00 1111000 000000 0
Q ss_pred cccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEE
Q 012024 273 GLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIE 352 (472)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve 352 (472)
........-.+... .......|.|||+.+..+. ...+.++.|++++
T Consensus 191 ~~~~~~~~~~~~~~--~~~~~~~~~ING~~~~~~~--------------------------------~~~l~v~~Ger~R 236 (333)
T 1mzy_A 191 SDPSEGYEDMVAVM--DTLIPSHIVFNGAVGALTG--------------------------------EGALKAKVGDNVL 236 (333)
T ss_dssp SSHHHHHHHHHHHH--TTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCEEE
T ss_pred ccccccccchhHHh--hccCCcEEEECCcccccCC--------------------------------CcceEecCCCEEE
Confidence 00000000000000 0011236899998752110 1125778999999
Q ss_pred EEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCC-ccceEEeCCCCEEEEEEEecCceeeEeeecchhHH
Q 012024 353 IVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV-ARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQ 431 (472)
Q Consensus 353 ~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~ 431 (472)
|++.|.+...|++++|+|.|+|++ . |.+. ..|. ++||+.|.+++.+.|.|.+++||.|+||||++.|+
T Consensus 237 l~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~h~ 305 (333)
T 1mzy_A 237 FVHSQPNRDSRPHLIGGHGDLVWE-T-GKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLIEA 305 (333)
T ss_dssp EEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHH
T ss_pred EEECCCCCccccEEECCCCeEEEe-C-Cccc---------CCCccCcceEEECCCceEEEEEEcCCCEEEEEecChhhhH
Confidence 887776655556667888899987 3 3221 1122 58999999999999999999999999999999997
Q ss_pred -hcccEEEEEEecCC
Q 012024 432 -YLGQQFYLRVYTAS 445 (472)
Q Consensus 432 -d~GMm~~~~V~~~~ 445 (472)
+.|||..|+|....
T Consensus 306 ~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 306 VHKGATAHVLVEGEW 320 (333)
T ss_dssp HTTCCEEEEEEESCC
T ss_pred hhCCCEEEEEEcCCC
Confidence 99999999997543
No 46
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.81 E-value=3.2e-21 Score=209.84 Aligned_cols=243 Identities=12% Similarity=0.062 Sum_probs=148.5
Q ss_pred CceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCC---------CCC
Q 012024 131 GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ---------PAR 201 (472)
Q Consensus 131 ~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~---------~~g 201 (472)
.|+|+++.|++++++|.|... ....++.+|..+..-.-||..- ....|.||++++..+++++ ..|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 589999999999999999975 4677777776654444357642 1245889999999998874 457
Q ss_pred ceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcc-cccCCCCC--CCCCCCCCCCCccccce
Q 012024 202 DYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARS-IRSNLTAS--GPRPNPQGSYHYGLINT 277 (472)
Q Consensus 202 ~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~-~~~~l~~~--~~~~~p~~~~~~~~~~~ 277 (472)
.||-........+. ....+.|.+...........+.....++...+..... ..+.+... .....|.. +. ..
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~-~~----~~ 346 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCN-IQ----ME 346 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-CC----SS
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccc-cc----cC
Confidence 88875543221000 1223434443332110000000000111101100000 00000000 00000100 00 00
Q ss_pred eeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEc
Q 012024 278 TKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN 357 (472)
Q Consensus 278 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N 357 (472)
+. ........|.|||+.|. .. ..+.++.|++|+|+|.|
T Consensus 347 d~--------~~~~~~~~~~ING~~~~--~~--------------------------------~~l~v~~Ge~vr~rliN 384 (770)
T 2r7e_B 347 DP--------TFKENYRFHAINGYIMD--TL--------------------------------PGLVMAQDQRIRWYLLS 384 (770)
T ss_dssp SS--------SSTTTSCEECTTSCTTT--TC--------------------------------CCCCCCSSSCEEEECCC
T ss_pred Cc--------cccccCCccccCCccCC--CC--------------------------------CCeEEeCCCEEEEEEEe
Confidence 00 00112235778887652 11 12456889999999999
Q ss_pred CCCC--CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhHHhccc
Q 012024 358 DEDI--IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQ 435 (472)
Q Consensus 358 ~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM 435 (472)
.+.. .||||||||.|+|++.++ .++||+.|.|++++.|+|++|+||.|+||||+++|++.||
T Consensus 385 ~g~~~~~H~fHlhGh~f~Vv~~dg----------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM 448 (770)
T 2r7e_B 385 MGSNENIHSIHFSGHVFTVRKKEE----------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLHAGM 448 (770)
T ss_dssp CCSSSCCCEEEBSSCCEECCSSSC----------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTBC
T ss_pred CCCCcceEEEEEcCCEEEEEecCC----------------ceeeEEEECCCeEEEEEEEeCCCCceEEEecccccccccc
Confidence 8753 799999999999987642 3799999999999999999999999999999999999999
Q ss_pred EEEEEEe
Q 012024 436 QFYLRVY 442 (472)
Q Consensus 436 m~~~~V~ 442 (472)
|..|.|.
T Consensus 449 ~~~~~V~ 455 (770)
T 2r7e_B 449 STLFLVY 455 (770)
T ss_dssp CCCCCBC
T ss_pred ccccccc
Confidence 9999884
No 47
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.76 E-value=6.9e-18 Score=174.17 Aligned_cols=246 Identities=13% Similarity=0.069 Sum_probs=163.5
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCC
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 199 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~ 199 (472)
..+++||+...|+|+++.|+++++||.|.... ..+.++++|+. ..||... ...|.||+++++.++++ .
T Consensus 49 ~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~-~ 117 (442)
T 2zoo_A 49 VFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL-N 117 (442)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC-S
T ss_pred EEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC-C
Confidence 57899999767899999999999999999643 57888998865 4677543 12589999999999997 5
Q ss_pred CCceEEEEeee-ecCC-CCceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccccce
Q 012024 200 ARDYYIVVSSR-FTST-VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINT 277 (472)
Q Consensus 200 ~g~y~i~~~~~-~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 277 (472)
+|.||...... ...+ .....+.|.+.... .+|. ...++...+. ++.+..... .+ .
T Consensus 118 ~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~-~d~e~~l~l~-----d~~~~~~~~--~~---------~- 174 (442)
T 2zoo_A 118 PGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP-VDREYYLVQG-----DFYTKGEFG--EA---------G- 174 (442)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC-CSEEEEEEEE-----EECBSSCTT--CC---------E-
T ss_pred CeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC-CCceEEEEee-----eeeccCccc--cc---------c-
Confidence 89999987421 1000 01234455554332 1111 1111111111 111110000 00 0
Q ss_pred eeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEEc
Q 012024 278 TKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN 357 (472)
Q Consensus 278 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~N 357 (472)
...+.+.... ......+.|||+.+.... ...+.++.|++++|.|.|
T Consensus 175 ~~~~~~~~~~--~~~~~~~liNG~~~~~~~--------------------------------~~~l~v~~G~~vrlrliN 220 (442)
T 2zoo_A 175 LQPFDMAKAI--DEDADYVVFNGSVGSTTD--------------------------------ENSLTAKVGETVRLYIGN 220 (442)
T ss_dssp EECBCHHHHH--TTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCEEEEEEEE
T ss_pred cccCChhHhc--cCCCCEEEECCCcCCCCC--------------------------------CCceEeCCCCEEEEEEEe
Confidence 0000000000 011235789998652100 012567899999999999
Q ss_pred CCC-CCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchhH-Hhccc
Q 012024 358 DED-IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWAR-QYLGQ 435 (472)
Q Consensus 358 ~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H-~d~GM 435 (472)
.+. ..|+||+||+.|.|++..++.. .|.+.|++.|.+++.+.|.|++++||.|++|||.+.| .+.||
T Consensus 221 ~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~ 289 (442)
T 2zoo_A 221 GGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGA 289 (442)
T ss_dssp EESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSC
T ss_pred CCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCc
Confidence 764 6799999999999999976421 2678999999999999999999999999999999999 58999
Q ss_pred EEEEEEecCC
Q 012024 436 QFYLRVYTAS 445 (472)
Q Consensus 436 m~~~~V~~~~ 445 (472)
+..++|....
T Consensus 290 ~a~l~v~~~~ 299 (442)
T 2zoo_A 290 LAMLKVEGPD 299 (442)
T ss_dssp EEEEEEESCC
T ss_pred eEEEEecCCC
Confidence 9999997554
No 48
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.73 E-value=1.6e-16 Score=158.01 Aligned_cols=257 Identities=14% Similarity=0.168 Sum_probs=152.7
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCC-CcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCC
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 199 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~-~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~ 199 (472)
..+++||+...|+|++++|+++++|+.|.... ..+.++++++.. .||.. +. . .|.||++++..+++++
T Consensus 54 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~~y~f~~~~- 122 (336)
T 1oe1_A 54 QAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQATLRFKADR- 122 (336)
T ss_dssp EEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEEEEEEECCS-
T ss_pred EEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEEEEEEECCC-
Confidence 57899999667899999999999999998642 567778877652 33332 11 1 3899999999999984
Q ss_pred CCceEEEEeeeec--CC-CCceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCC-cccc
Q 012024 200 ARDYYIVVSSRFT--ST-VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYH-YGLI 275 (472)
Q Consensus 200 ~g~y~i~~~~~~~--~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~~~~ 275 (472)
+|.||........ .+ .....+.|........ ..+.+.....+.+..+. .. ++.+.. ...+.+. +...
T Consensus 123 ~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~-~~~~~~~~~~D~e~~l~-~~--D~~~~~-----~~~g~~~~~~~~ 193 (336)
T 1oe1_A 123 SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGL-KDPQGKPLHYDRAYTIG-EF--DLYIPK-----GPDGKYKDYATL 193 (336)
T ss_dssp CEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCC-BCTTSCBCCCSEEEEEE-EE--EECCCB-----CTTSSBCCCSST
T ss_pred CeEEEEecCCCCchhHHHhCCCeEEEEEecCcCC-cccccCcccCCceeEee-ee--eeeecc-----ccCCceeecccc
Confidence 8999988764210 01 0123343433332210 01111100001110000 00 111100 0000000 0000
Q ss_pred -ceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEE
Q 012024 276 -NTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 354 (472)
Q Consensus 276 -~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~v 354 (472)
..... .+.... .. ....+.|||+.+... +...+.++.|++++|+
T Consensus 194 ~~~~~~-~~~~~~-~~-~~~~~liNG~~~~~~--------------------------------~~~~l~v~~GervRli 238 (336)
T 1oe1_A 194 AESYGD-TVQVMR-TL-TPSHIVFNGKVGALT--------------------------------GANALTAKVGETVLLI 238 (336)
T ss_dssp GGGHHH-HHHHHH-TT-CCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEEE
T ss_pred cccccc-hhhHhh-cC-CCCEEEECCeeccCC--------------------------------CCcceEcCCCCEEEEE
Confidence 00000 000000 00 113678898765210 0123678899999987
Q ss_pred EEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCC--ccceEEeCCCCEEEEEEEecCceeeEeeecchhHH-
Q 012024 355 FQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV--ARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQ- 431 (472)
Q Consensus 355 i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~- 431 (472)
..+.....+++++|||.|.|+. .|.+ .+|+ +.||+.|++++.+.+.+.+++||.|+||||.+.|.
T Consensus 239 n~~~~~~~~~~~i~gh~~~Vi~--DG~~----------~~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~ 306 (336)
T 1oe1_A 239 HSQANRDTRPHLIGGHGDWVWE--TGKF----------ANPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAF 306 (336)
T ss_dssp EEESSSCBCEEETTCCEEEEET--TCCT----------TSCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHH
T ss_pred ecCCCCccceEEECCcCceEeC--CCcC----------cCCccccceEEEECCCCcEEEEEEcCCCceEEEEechhhccc
Confidence 6666555677778999999996 3322 1132 46999999999999999999999999999999986
Q ss_pred hcccEEEEEEecC
Q 012024 432 YLGQQFYLRVYTA 444 (472)
Q Consensus 432 d~GMm~~~~V~~~ 444 (472)
+.||++.|+|...
T Consensus 307 ~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 307 ELGAAGHIKVEGK 319 (336)
T ss_dssp TTSCEEEEEEESC
T ss_pred cCCCeEEEEECCC
Confidence 9999999999754
No 49
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.37 E-value=9.2e-14 Score=113.80 Aligned_cols=74 Identities=15% Similarity=0.228 Sum_probs=58.6
Q ss_pred cccccccCCeeEeccCCCCCCC--CCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeC
Q 012024 2 SLTATSIRSAFANGNGIQNRRN--SFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~--~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
.++|....+.++||||..++.. ..+||.+.+++.|.||++++|+|.+++++|+|||||| .+...||.|.|+|++
T Consensus 30 ~~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 30 KWVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp EEEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred EEEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 3679988999999999876431 1234443456789999999999988568999999999 456789999999974
No 50
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.23 E-value=8.9e-12 Score=107.43 Aligned_cols=93 Identities=11% Similarity=0.017 Sum_probs=71.9
Q ss_pred EEeecCCcEEEEEEEcCCCC-CCCeeecCCceEEEE-------eec--CCCCCCCCCCCCcCCCCccceEEeCCCCEEEE
Q 012024 342 VMGADYRAFIEIVFQNDEDI-IQSYHLNGYQFWVVG-------MDG--GQWTSASRNQYNLRDAVARVTVQVYPKSWSAI 411 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~-------~~~--g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~i 411 (472)
.++++.|++|+|++.|.+.. .|.||+|+....+.. ..+ ..+.+.. ....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 46789999999999999888 899999986532110 000 0111110 1135789999999999999
Q ss_pred EEEecCceeeEeeecchhHHhcccEEEEEE
Q 012024 412 YIALDNVGMWNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 412 rf~adnpG~w~~HCHil~H~d~GMm~~~~V 441 (472)
.|.+++||.|.||||+..|+. ||+..+.|
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 999999999999999999999 99999987
No 51
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.21 E-value=3.1e-11 Score=98.54 Aligned_cols=85 Identities=11% Similarity=-0.007 Sum_probs=66.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEe-cCce
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIAL-DNVG 419 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a-dnpG 419 (472)
..+.++.|+.|+| .|.+...|+||+||..|... . |. + .+....++..+.|++...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~--~-g~---------~-~~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA--S-KE---------L-ADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG--C-HH---------H-HHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc--c-cc---------c-cccccccccccCCCCeEEEEEecCCCCe
Confidence 3578899999976 48777899999999876431 0 00 0 00112588999999999999998 7999
Q ss_pred eeEeeecchhHHhcccEEEEEEe
Q 012024 420 MWNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 420 ~w~~HCHil~H~d~GMm~~~~V~ 442 (472)
.|.|||| .|...||+..+.|.
T Consensus 84 ~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--CchhcCCEEEEEEc
Confidence 9999999 59999999999885
No 52
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.12 E-value=9.1e-11 Score=120.56 Aligned_cols=225 Identities=14% Similarity=0.173 Sum_probs=142.5
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCC-C
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-P 199 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~-~ 199 (472)
..+++||+...|+|++++|+++++|+.|.... ...++.+|..+.- ..||.++ .|.||++++..+++++ .
T Consensus 36 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-~tsiHwHG~~~~~-~~DG~~~--------~I~PG~~~~Y~f~~~~~~ 105 (439)
T 2xu9_A 36 TLLTYGGSFPGPTLRVRPRDTVRLTLENRLPE-PTNLHWHGLPISP-KVDDPFL--------EIPPGESWTYEFTVPKEL 105 (439)
T ss_dssp EEEEETTBSSCCEEEECTTCEEEEEEEECSSS-CBCCEEETCCCCT-TTSCTTC--------CBCTTCEEEEEEECCSSC
T ss_pred EEEEECCcccCCEEEEeCCCEEEEEEEECCCC-CcceEeCCCCCCc-cccCCcc--------cCCCCCeEEEEEecCCCC
Confidence 57899999777999999999999999999864 6777888765432 5788641 3899999999998753 6
Q ss_pred CCceEEEEeeee--cCCC-CceEEEEEEeCCCCCCCCCCCCCC-CccccccchhhcccccCCCCCCCCCCCCCCCCcccc
Q 012024 200 ARDYYIVVSSRF--TSTV-LTTTGILHYSNSAGPVSGPIPGGP-TVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLI 275 (472)
Q Consensus 200 ~g~y~i~~~~~~--~~~~-~~~~ail~y~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~ 275 (472)
+|.||-...... ..+. ....+.|.+.+... ..|..+ ..+....+. ++.+... ......
T Consensus 106 ~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~----~~~~~~~~~e~~l~l~-----D~~~~~~-~~~~~~-------- 167 (439)
T 2xu9_A 106 AGTFWYHPHLHGRVAPQLFAGLLGALVVESSLD----AIPELREAEEHLLVLK-----DLALQGG-RPAPHT-------- 167 (439)
T ss_dssp CEEEEEECCCTTSHHHHHHTTCCEEEEECCGGG----GSHHHHTSEEEEEEEE-----EECEETT-EECCCC--------
T ss_pred CcceEeccCCCCchHHHHHhhCeEEEEEcCccc----cCccCCCCCcEEEEEE-----eeeeCCC-CcCCCC--------
Confidence 899998776421 0010 11233343433210 011000 001000000 0111000 000000
Q ss_pred ceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEE
Q 012024 276 NTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVF 355 (472)
Q Consensus 276 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi 355 (472)
. +....+ . ....+.|||+.+ +.+.++.| +++|.|
T Consensus 168 ~------~~~~~g-~-~~~~~~iNG~~~-------------------------------------p~l~v~~g-~~RlRl 201 (439)
T 2xu9_A 168 P------MDWMNG-K-EGDLVLVNGALR-------------------------------------PTLVAQKA-TLRLRL 201 (439)
T ss_dssp H------HHHHHC-C-CCSEEEETTEES-------------------------------------CEEECSSS-EEEEEE
T ss_pred c------cccccC-C-CCCEEEECCccC-------------------------------------CcEEecCC-eEEEEE
Confidence 0 000000 0 112467777642 13567889 999999
Q ss_pred EcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchh
Q 012024 356 QNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWA 429 (472)
Q Consensus 356 ~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 429 (472)
.|.+.. .|.||++||.|+|++..++.. ..|...|++.|.+++.+.|.+.++++|.|.++|+...
T Consensus 202 iN~~~~~~~~~~i~gh~~~vi~~DG~~~----------~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~ 266 (439)
T 2xu9_A 202 LNASNARYYRLALQDHPLYLIAADGGFL----------EEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYD 266 (439)
T ss_dssp EECCSSCCEEEEETTBCEEEEEETTEEE----------EEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCC
T ss_pred EecCCCceEEEEECCceEEEEecCCCCC----------CCceEeceEEECCceeEEEEEEcCCCceEEEEecccc
Confidence 999865 599999999999999976532 2366789999999999999999999999999998643
No 53
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.10 E-value=2.4e-10 Score=110.68 Aligned_cols=87 Identities=13% Similarity=-0.005 Sum_probs=70.8
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.+.++.|+.|++.+.|.....|++|+||... ...+|. |. .+...|+||+..+.+|.++++|.|
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~-------------p~-~~~~~i~PG~~~~y~f~~~~~Gt~ 129 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGT-------------PG-IGAGSIAPGQSFTYEFDATPFGTH 129 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCC-------------TT-STTCSBCTTCEEEEEEECCSCEEE
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCC-------------CC-ccceeECCCCEEEEEEEcCCCccE
Confidence 4678999999999999999999999999862 111110 11 245678999999999999999999
Q ss_pred Eeeecch---hHHhcccEEEEEEecCC
Q 012024 422 NLRSESW---ARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 422 ~~HCHil---~H~d~GMm~~~~V~~~~ 445 (472)
.||||.. .|...||+..+.|.++.
T Consensus 130 ~yH~H~~~~~~~~~~Gl~G~liV~~~~ 156 (288)
T 3gdc_A 130 LYHCHQSPLAPHIAKGLYGGFIVEPKE 156 (288)
T ss_dssp EEECCCSSHHHHHHTTCEEEEEEECSS
T ss_pred EEEecCcchHHHHhCcCeEEEEEeCCc
Confidence 9999996 79999999999886543
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.98 E-value=1.2e-08 Score=106.82 Aligned_cols=240 Identities=9% Similarity=0.097 Sum_probs=148.6
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccCC----CcEeEEEeCceeE-EEEeCCccccceeeeEEEEcCCCeEEEEE
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ----NSLNFRIQNHKMK-LVEVEGTHTLQTTYSSLDVHVGQSYSVLV 194 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~----~~~~~~i~~h~~~-via~DG~~~~p~~~~~l~l~~G~R~dv~v 194 (472)
-..+++||+...|+|+++.|+++++++.|.... ....++.+|.... --..||..-. ..-.|.||+.+...+
T Consensus 43 ~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~~I~PG~s~~Y~f 118 (521)
T 1v10_A 43 RSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFV----NQCPIIPNESFVYDF 118 (521)
T ss_dssp EEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTEEEEEEE
T ss_pred EEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcce----eeCCcCCCCeEEEEE
Confidence 357999999777999999999999999999872 5777888876541 1236886531 123478999999999
Q ss_pred EeCCCCCceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCcc
Q 012024 195 TADQPARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYG 273 (472)
Q Consensus 195 ~~~~~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 273 (472)
+..+..|.||-..... .+. ....+.|...+...+....... ...+....+. ++.+... +.
T Consensus 119 ~~~~~~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~~~~~~-d~~e~~l~l~-----D~~~~~~-------~~---- 179 (521)
T 1v10_A 119 VVPGQAGTYWYHSHLS--TQYCDGLRGAFVVYDPNDPHLSLYDV-DDASTVITIA-----DWYHSLS-------TV---- 179 (521)
T ss_dssp ECTTCCEEEEEEECST--TGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEE-----EECSSCC-------C-----
T ss_pred ecCCCCccEEEEeccC--CchhcCceEEEEEcCCcccccccCCC-CCceeEEEEc-----ccccCCH-------HH----
Confidence 8655789999887653 222 1234444444322110000000 0001110010 1111100 00
Q ss_pred ccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEE
Q 012024 274 LINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEI 353 (472)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~ 353 (472)
+....... ......+.|||+.+.....+ ......+.++.|++++|
T Consensus 180 -------~~~~~~~~-~~~~d~~liNG~~~~~~~~~---------------------------~~~~~~~~v~~G~~~Rl 224 (521)
T 1v10_A 180 -------LFPNPNKA-PPAPDTTLINGLGRNSANPS---------------------------AGQLAVVSVQSGKRYRF 224 (521)
T ss_dssp -------------CC-CSCCSEEEETTBCCCSSCGG---------------------------GSCCCEEEECTTCEEEE
T ss_pred -------HhhccCCC-CCCCCEEEECCcccCCCCCC---------------------------CCCceEEEECCCCEEEE
Confidence 00000000 00112577888754210000 00124578899999999
Q ss_pred EEEcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC-ceeeEeeecch
Q 012024 354 VFQNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN-VGMWNLRSESW 428 (472)
Q Consensus 354 vi~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn-pG~w~~HCHil 428 (472)
.|.|.+.. .|.||++||.|+|++..++.. .|...|++.|.+++.+.|.+.++. +|.|.++|+..
T Consensus 225 RliNa~~~~~~~~~i~gh~~~vi~~DG~~~-----------~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 225 RIVSTSCFPNYAFSIDGHRMTVIEVDGVSH-----------QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp EEEECCSSCCEEEEETTCCEEEEEETTEEE-----------EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred EEEecCCcccEEEEECCCeEEEEecCCccc-----------cceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 99999865 589999999999999976421 266789999999999999999976 69999999864
No 55
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.98 E-value=1.2e-09 Score=89.14 Aligned_cols=85 Identities=9% Similarity=0.046 Sum_probs=63.6
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEe-cCce
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIAL-DNVG 419 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a-dnpG 419 (472)
..++++.|++|.|+ |.+...|.||+|+..+.. . .|. + . ....+|++.+.+|+...+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~-~---~------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD-L---A------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH-H---H------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc-c---c------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 35788999999886 777788999999764411 0 000 0 0 0011467788899999998888 7999
Q ss_pred eeEeeecchhHHhcccEEEEEEe
Q 012024 420 MWNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 420 ~w~~HCHil~H~d~GMm~~~~V~ 442 (472)
.|.|||| .|.+.||+..+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 69999999999885
No 56
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=98.96 E-value=2.8e-09 Score=109.70 Aligned_cols=230 Identities=16% Similarity=0.175 Sum_probs=143.4
Q ss_pred CCCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCC
Q 012024 119 LPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 198 (472)
Q Consensus 119 ~~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~ 198 (472)
....+++||+...|+|++++|+++++++.|.... ...++.+|..+.- +.||.. .-.|.||++++..+++++
T Consensus 37 ~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-~tsiHwHG~~~~~-~~DG~~-------~~~i~PG~~~~Y~f~~~~ 107 (451)
T 2uxt_A 37 RASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTE-NVSMTVAGLQVPG-PLMGGP-------ARMMSPNADWAPVLPIRQ 107 (451)
T ss_dssp SSCCEEETTSSBCCEEEEETTCEEEEEEEECSSS-CBCEEEETCCCCG-GGSCSG-------GGCBCTTCEECCEEECCS
T ss_pred eeEEEEECCcccCceEEEeCCCEEEEEEEECCCC-CccEEECCccCCC-CCCCCC-------cCcCCCCCeEEEEEEcCC
Confidence 3458999999767999999999999999999864 6778888764321 379975 234789999999999987
Q ss_pred CCCceEEEEeeee--cCCC-CceEEEEEEeCCCCCCCCCCCCCC-CccccccchhhcccccCCCCCCCCCCCCCCCCccc
Q 012024 199 PARDYYIVVSSRF--TSTV-LTTTGILHYSNSAGPVSGPIPGGP-TVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGL 274 (472)
Q Consensus 199 ~~g~y~i~~~~~~--~~~~-~~~~ail~y~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 274 (472)
.+|.||-...... ..+. ....+.|........ ..++|..- ..+....+. ++.+... +...
T Consensus 108 ~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~p~~y~~~e~~l~l~-----D~~~~~~-------~~~~--- 171 (451)
T 2uxt_A 108 NAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSK-SLPIPNHYGVDDFPVIIQ-----DKRLDNF-------GTPE--- 171 (451)
T ss_dssp CSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHH-HSSSCCCBTTTEEEEEEE-----EEEECTT-------SCEE---
T ss_pred CCcceEEecCCCCchhhhHhhcceEEEEEecCccc-ccCCCccCCCceEEEEEE-----eeecCCC-------Ccee---
Confidence 7899998876521 1111 123344444332110 01122100 011111110 0100000 0000
Q ss_pred cceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEE
Q 012024 275 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 354 (472)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~v 354 (472)
+....... . ....+.|||+.+ | .+.++.| +++|.
T Consensus 172 ------~~~~~~~~-~-~~d~~liNG~~~-----p--------------------------------~~~v~~g-~~RlR 205 (451)
T 2uxt_A 172 ------YNEPGSGG-F-VGDTLLVNGVQS-----P--------------------------------YVEVSRG-WVRLR 205 (451)
T ss_dssp ------CCCCSSSC-C-CCSEEEETTEES-----C--------------------------------EEEECSS-EEEEE
T ss_pred ------cccccCCC-C-cCCEEEECCccc-----c--------------------------------eEEecCC-EEEEE
Confidence 00000000 0 012567888753 1 2567889 99999
Q ss_pred EEcCCCC-CCCeee-cCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecchh
Q 012024 355 FQNDEDI-IQSYHL-NGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWA 429 (472)
Q Consensus 355 i~N~~~~-~HP~Hl-HG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 429 (472)
|.|.+.. .+.||| |||.|+|++..++.. ..|...|++.|.+++.+.|.+.++.+|.+.++++...
T Consensus 206 liNa~~~~~~~~~i~dg~~~~vi~~DG~~~----------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~ 272 (451)
T 2uxt_A 206 LLNASNSRRYQLQMNDGRPLHVISGDQGFL----------PAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAA 272 (451)
T ss_dssp EEECCSSCCEEEEETTSCCEEEEECSSSEE----------EEEEEESSEEECTTCEEEEEEECTTCCCEEEEC----
T ss_pred EEccCCceeEEEEECCCCeEEEEEeCCCcc----------CCceEeceEEECceeEEEEEEEeCCCCEEEEEecCcc
Confidence 9999865 599999 999999999876421 2366789999999999999999988899999988643
No 57
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.93 E-value=4.2e-08 Score=101.88 Aligned_cols=235 Identities=10% Similarity=0.078 Sum_probs=146.5
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCC----CcEeEEEeCceeEE-EEeCCccccceeeeEEEEcCCCeEEEEEE
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQ----NSLNFRIQNHKMKL-VEVEGTHTLQTTYSSLDVHVGQSYSVLVT 195 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~----~~~~~~i~~h~~~v-ia~DG~~~~p~~~~~l~l~~G~R~dv~v~ 195 (472)
..+++||+...|+|+++.|+++++++.|.... ....++.+|..+.- -..||..- +..-.|.||+.+..-++
T Consensus 24 ~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY~f~ 99 (495)
T 3t6v_A 24 PAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSYNFN 99 (495)
T ss_dssp EEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEE
T ss_pred EEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEEE
Confidence 57899999877999999999999999998764 35777887765421 24788643 12235789999999999
Q ss_pred eCCCCCceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccc
Q 012024 196 ADQPARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGL 274 (472)
Q Consensus 196 ~~~~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 274 (472)
+++..|+||-...... +. ....+.|.......+...... ....+....+. ++.......
T Consensus 100 ~~~~~GT~wYHsH~~~--q~~~GL~G~lIV~~~~~~~~~~~~-~d~~e~~l~l~-----Dw~~~~~~~------------ 159 (495)
T 3t6v_A 100 VPGMAGTYWYHSHLTT--QYCDGLRGPFVVYDPNDPDANLYD-VDDDTTIITLA-----DWYHVLAKE------------ 159 (495)
T ss_dssp CTTCCEEEEEEECSTT--GGGGTCEEEEEEECTTCTTGGGCS-BCSGGGEEEEE-----EECSSCGGG------------
T ss_pred eCCCCceeeeeccchh--HHhcCceEEEEEcCccccccccCC-CCCceeEEEEe-----cccCCchhh------------
Confidence 9657899998876531 21 123444444332211000000 00000000000 111100000
Q ss_pred cceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEE
Q 012024 275 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 354 (472)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~v 354 (472)
. .. ........+.|||+..... .| . ......+.++.|+.++|.
T Consensus 160 --~------~~--~~p~~~d~~liNG~g~~~~-~~----------------------~----~~~~~~~~v~~G~~~RlR 202 (495)
T 3t6v_A 160 --M------GA--GGAITADSTLIDGLGRTHV-NV----------------------A----AVPLSVITVEVGKRYRMR 202 (495)
T ss_dssp --S------CS--SSCCCCSEEEETTBCCBSS-SC----------------------C----CCCCCEEEECTTCEEEEE
T ss_pred --h------cc--CCCCCCcEEEECCcCcCCC-Cc----------------------c----cCCceEEEEcCCCEEEEE
Confidence 0 00 0000112577888642100 00 0 001345788999999999
Q ss_pred EEcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCc-eeeEeeecc
Q 012024 355 FQNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNV-GMWNLRSES 427 (472)
Q Consensus 355 i~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnp-G~w~~HCHi 427 (472)
|.|.+.. .+.|||+||.|+|++..+.. ..|...|++.|.+++.+.|-++++.+ |.|.++|..
T Consensus 203 liN~~~~~~~~~~i~gh~~~via~DG~~-----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 203 LVSISCDPNYDFSIDGHDMTIIETDGVD-----------SQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp EEECCSSCCEEEEETTCCEEEEEETTEE-----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred EEecCCCeeEEEEECCCeEEEEEeCCcc-----------cCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 9998754 58999999999999997531 23667899999999999999999875 999999875
No 58
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.93 E-value=3.6e-08 Score=102.45 Aligned_cols=233 Identities=11% Similarity=0.127 Sum_probs=146.6
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCC----CcEeEEEeCceeEE-EEeCCccccceeeeEEEEcCCCeEEEEEE
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQ----NSLNFRIQNHKMKL-VEVEGTHTLQTTYSSLDVHVGQSYSVLVT 195 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~----~~~~~~i~~h~~~v-ia~DG~~~~p~~~~~l~l~~G~R~dv~v~ 195 (472)
..+++||+...|+|+++.|+++++++.|.... ....++.+|..+.- -..||..-. ..-.|.||+.+..-++
T Consensus 23 ~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~pI~PG~s~tY~f~ 98 (499)
T 3pxl_A 23 QAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI----NQCPISPGHSFLYDFQ 98 (499)
T ss_dssp EEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEE
T ss_pred EEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc----ccCCCCCCCeEEEEEE
Confidence 47899999877999999999999999998764 46778888765421 357886431 1225789999999999
Q ss_pred eCCCCCceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccc
Q 012024 196 ADQPARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGL 274 (472)
Q Consensus 196 ~~~~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 274 (472)
+++..|+||-...... +. ....+.|.......+....... ...+....+. ++...... ..
T Consensus 99 ~~~~~GT~wYHsH~~~--q~~~GL~G~lIV~~~~~~~~~~~~~-d~~~~~l~l~-----Dw~~~~~~-----~~------ 159 (499)
T 3pxl_A 99 VPDQAGTFWYHSHLST--QYCDGLRGPFVVYDPNDPHASRYDV-DNDDTVITLA-----DWYHTAAK-----LG------ 159 (499)
T ss_dssp CSSCCEEEEEEECSTT--GGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEE-----EECSSCTT-----TS------
T ss_pred cCCCCceeeeeccchh--HHhccceeEEEEcCCcccccccCCC-CCceEEEEEE-----cccCCccc-----cc------
Confidence 9657899998876531 21 1234444443322110000000 0000000000 11111000 00
Q ss_pred cceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEE
Q 012024 275 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 354 (472)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~v 354 (472)
.. .......+.|||+..... .+ ......+.++.|++++|.
T Consensus 160 ---------~~---~p~~~d~~liNG~~~~~~-~~---------------------------~~~~~~~~v~~G~~~RlR 199 (499)
T 3pxl_A 160 ---------PR---FPGGADATLINGKGRAPS-DS---------------------------VAELSVIKVTKGKRYRFR 199 (499)
T ss_dssp ---------CS---SCSSCSEEEETTBCCCTT-CT---------------------------TCCCCEEEECTTCEEEEE
T ss_pred ---------cC---CCCCCcEEEECCCCcCCC-CC---------------------------CCCcceEEEcCCCEEEEE
Confidence 00 000112577888642110 00 001345788999999999
Q ss_pred EEcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCc-eeeEeeecc
Q 012024 355 FQNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNV-GMWNLRSES 427 (472)
Q Consensus 355 i~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnp-G~w~~HCHi 427 (472)
|.|.+.. .+-|||+||.|+|++..+.. ..|...|++.|.+++.+.|.+.++.+ |.|.+.|..
T Consensus 200 liNa~~~~~~~~~i~gh~~~via~DG~~-----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 200 LVSLSCNPNHTFSIDGHNLTIIEVDSVN-----------SQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp EEECCSSCCEEEEETTBCEEEEEETTEE-----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred EEecCCCeeEEEEECCCeEEEEEECCcc-----------cCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 9998864 58999999999999997531 23667899999999999999999875 899899875
No 59
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.93 E-value=1.5e-08 Score=107.05 Aligned_cols=251 Identities=13% Similarity=0.096 Sum_probs=150.0
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEE-EeCCccccceeeeEEEEcCCCeEEEEEEeCCC
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLV-EVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 199 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~vi-a~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~ 199 (472)
..+++||+...|+|+++.|+++++++.|........++.+|..+.-- ..||.+-. ..-.|.||+++...++++ .
T Consensus 23 ~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~~I~PG~s~tY~f~~~-~ 97 (552)
T 1aoz_A 23 IVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASI----SQCAINPGETFFYNFTVD-N 97 (552)
T ss_dssp EEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECC-S
T ss_pred EEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccc----ccCCcCCCCeEEEEEECC-C
Confidence 57999999767999999999999999999875577888888543211 15887541 233578999999999995 6
Q ss_pred CCceEEEEeeeecCCCC-ceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCC-----CCCCCCCCCCcc
Q 012024 200 ARDYYIVVSSRFTSTVL-TTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASG-----PRPNPQGSYHYG 273 (472)
Q Consensus 200 ~g~y~i~~~~~~~~~~~-~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~-----~~~~p~~~~~~~ 273 (472)
+|.||-..... .+.. ...+.|....... ...+.+. ..+....+. ++...... ....+.
T Consensus 98 ~GT~wYHsH~~--~q~~~Gl~G~liV~~~~~-~~~~~~~--d~e~~l~l~-----Dw~~~~~~~~~~~~~~~~~------ 161 (552)
T 1aoz_A 98 PGTFFYHGHLG--MQRSAGLYGSLIVDPPQG-KKEPFHY--DGEINLLLS-----DWWHQSIHKQEVGLSSKPI------ 161 (552)
T ss_dssp CEEEEEEECST--TTGGGTCEEEEEEECCTT-CCCSSCC--SEEEEEEEE-----EECSSCHHHHHHHTTSSSC------
T ss_pred CEEEEEEECch--hHHhccCeeeEEEeCCcc-cCCCCCC--CccceEEee-----cccCCCHHHHHhhhhcccc------
Confidence 89999987652 2221 2344444443321 1111111 011111111 00000000 000000
Q ss_pred ccceeeEEEecccccccCCeEeEEEcCeeccCCC-CccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEE
Q 012024 274 LINTTKTIRLSSSAGQVNGKQRYAINSVSFIPAD-TPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIE 352 (472)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~-~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve 352 (472)
...+......|||+...... .+.. ......|.. .+ ........+.++.|++++
T Consensus 162 --------------~~~~~~~~~liNG~~~~~c~~~~~~-----~~~~~~c~~------~~-~~~~~~~~~~v~~G~~~R 215 (552)
T 1aoz_A 162 --------------RWIGEPQTILLNGRGQFDCSIAAKY-----DSNLEPCKL------KG-SESCAPYIFHVSPKKTYR 215 (552)
T ss_dssp --------------CCCCSCSEEEETTBCCSSSBTTGGG-----CTTSCBCCC------CS-CSTTSCCCEEECTTCEEE
T ss_pred --------------cCCCCCCeEEECCccccCcccCccc-----ccccccccc------cC-CCCCCceEEEEcCCCEEE
Confidence 00011124689998632100 0000 000000100 00 000011257899999999
Q ss_pred EEEEcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC--ceeeEeeecchh
Q 012024 353 IVFQNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN--VGMWNLRSESWA 429 (472)
Q Consensus 353 ~vi~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn--pG~w~~HCHil~ 429 (472)
|.|.|.+.. .+-|||+||.|+|++..++.. .|...|++.|.+++.+.|.+.+++ +|.|.++|+...
T Consensus 216 lRliNa~~~~~~~~~i~gh~~~vi~~DG~~~-----------~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~ 284 (552)
T 1aoz_A 216 IRIASTTALAALNFAIGNHQLLVVEADGNYV-----------QPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA 284 (552)
T ss_dssp EEEEECCSSCEEEEEETTCCEEEEEETTEEE-----------EEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES
T ss_pred EEEEcccccceEEEEEcCcEEEEEEECCccc-----------CceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc
Confidence 999999854 589999999999999976422 366789999999999999999943 799999999864
No 60
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.89 E-value=3.4e-08 Score=103.02 Aligned_cols=232 Identities=10% Similarity=0.111 Sum_probs=146.9
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCC----CcEeEEEeCceeE-EEEeCCccccceeeeEEEEcCCCeEEEEEE
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQ----NSLNFRIQNHKMK-LVEVEGTHTLQTTYSSLDVHVGQSYSVLVT 195 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~----~~~~~~i~~h~~~-via~DG~~~~p~~~~~l~l~~G~R~dv~v~ 195 (472)
..+++||+. .|+|+++.|+++++++.|.... ....++.+|.... --..||..-. ..-.|.||+.+...++
T Consensus 24 ~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~v----tq~~I~PG~~~~Y~f~ 98 (503)
T 1hfu_A 24 AGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGV----NQCPISPGHAFLYKFT 98 (503)
T ss_dssp EEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEC
T ss_pred EEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccc----ccCCcCCCCeEEEEEE
Confidence 578999998 8999999999999999998872 5777888776531 1246887531 1234789999999998
Q ss_pred eCCCCCceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCccc
Q 012024 196 ADQPARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGL 274 (472)
Q Consensus 196 ~~~~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 274 (472)
..+.+|+||-..... .+. ....+.|...+...+....... ...+....+. ++.... .+
T Consensus 99 ~~~~~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~~~~~~-d~~e~~l~l~-----Dw~~~~-------~~------ 157 (503)
T 1hfu_A 99 PAGHAGTFWYHSHFG--TQYCDGLRGPMVIYDDNDPHAALYDE-DDENTIITLA-----DWYHIP-------AP------ 157 (503)
T ss_dssp CTTCCEEEEEEECST--TGGGGTCEEEEEEECTTCTTGGGCSB-CSTTSEEEEE-----EECSSC-------GG------
T ss_pred eCCCCccEEEEecch--hhhhCcceeeEEEcCCCCCcccCCCC-CCceEEEEEc-----ccccCC-------hH------
Confidence 655789999987653 122 1234444444322110000000 0000000000 011100 00
Q ss_pred cceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEE
Q 012024 275 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 354 (472)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~v 354 (472)
... .+ .....+.|||+.+... .+ ......+.++.|++++|.
T Consensus 158 -~~~-~~---------~~~d~~liNG~~~~~~-~~---------------------------~~~~~~~~v~~g~~~RlR 198 (503)
T 1hfu_A 158 -SIQ-GA---------AQPDATLINGKGRYVG-GP---------------------------AAELSIVNVEQGKKYRMR 198 (503)
T ss_dssp -GCC-------------CCSEEEETTBCCBTT-CC---------------------------CCCCCEEEECTTCEEEEE
T ss_pred -Hhc-CC---------CCCCEEEECcccccCC-CC---------------------------CCcceEEEEcCCCEEEEE
Confidence 000 00 0112567888754210 00 001245788999999999
Q ss_pred EEcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC-ceeeEeeecch
Q 012024 355 FQNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN-VGMWNLRSESW 428 (472)
Q Consensus 355 i~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn-pG~w~~HCHil 428 (472)
|.|.+.. .|.|||+||.|+|++..++. ..|...|++.|.+++.+.|.+.++. +|.|.++++..
T Consensus 199 liN~~~~~~~~~~i~gh~~~vi~~DG~~-----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 199 LISLSCDPNWQFSIDGHELTIIEVDGEL-----------TEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263 (503)
T ss_dssp EEECCSSCCEEEEETTCCEEEEEETTEE-----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred EEecCCcccEEEEEcCceEEEEeccCcc-----------ccccccCeEEEcccceEEEEEEcCCCccceeeeeccc
Confidence 9999865 59999999999999987642 1266789999999999999999976 69999999864
No 61
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=98.83 E-value=4e-09 Score=101.43 Aligned_cols=77 Identities=13% Similarity=0.147 Sum_probs=61.8
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCC-------C-c-cCCCCCCCCeEEEEEEeCC--ceeeeEEecccchhhhcCce
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGV-------Y-G-TTCPIPPGKNFTYILQVKD--QIGSFYYFPSLAFHKAAGGF 70 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv-------~-~-tq~~i~pG~~~~Y~~~~~~--~~Gt~wYH~H~~~q~~~Gl~ 70 (472)
.|.|......++||||...... .||. + . .++.|.||++++|+|.+.+ .+|+||||||...+...||.
T Consensus 181 ~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~ 258 (276)
T 3kw8_A 181 VMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMV 258 (276)
T ss_dssp EEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCE
T ss_pred EEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCe
Confidence 4678888899999999754322 3442 1 1 3456999999999999852 69999999999999999999
Q ss_pred eEEEEeCCCC
Q 012024 71 GGIRILSRPR 80 (472)
Q Consensus 71 G~liV~~~~~ 80 (472)
|.|+|++++.
T Consensus 259 g~~~V~~~~~ 268 (276)
T 3kw8_A 259 GLFLVKKPDG 268 (276)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEeCCCC
Confidence 9999999764
No 62
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.77 E-value=1.5e-08 Score=99.13 Aligned_cols=194 Identities=14% Similarity=0.179 Sum_probs=157.9
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeC------------CceeeeEEecccc------h
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVK------------DQIGSFYYFPSLA------F 63 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~------------~~~Gt~wYH~H~~------~ 63 (472)
.|+|.|+++|||||||+++. +++||++.+||+|+||++|+|+|++. +++||||||||.. .
T Consensus 55 ~~~N~l~~~~siH~HG~~~~--~~~dG~~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~ 132 (313)
T 3tas_A 55 EFENTMDVPVSLHVHGLDYE--ISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTG 132 (313)
T ss_dssp EEEECSSSCBCCEESSSBCC--GGGSCSTTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHH
T ss_pred EEEECCCCCccEeecCCcCC--ccCCCCccccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchh
Confidence 58999999999999999984 56999999999999999999999863 3689999999974 4
Q ss_pred hhhcCceeEEEEeCCCCCCCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCC--CCceEEEeCCcE
Q 012024 64 HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG--SGAAFNVEQGKT 141 (472)
Q Consensus 64 q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~~~~~~v~~g~~ 141 (472)
|+++||+|+|||+++.. . .+|+|++|+++||+.+ |+. ..+.+.++.|++
T Consensus 133 ~~~~Gl~G~liV~~~~~--~---~~d~e~~l~~~d~t~N------------------------g~~~~~~~~l~v~~Ge~ 183 (313)
T 3tas_A 133 GIRNGLYGPVIVRRKGD--V---LPDRTHTIVFNDMTIN------------------------NRPAHTGPDFEATVGDR 183 (313)
T ss_dssp HHHHTCEEEEEEECTTC--B---CCSEEEEEEEETTEET------------------------TCCTTCCCCEEEETTCE
T ss_pred hhhccccCceEeecccc--c---cccccceeeccchhcc------------------------cCCcccccccccccCCE
Confidence 58899999999999753 1 3489999999998643 322 236799999999
Q ss_pred EEEEEEEccCCCcEeEEEeCceeEEEEeCCccc---cceeeeEEEEcCCCeEEEEEEeCC--CCCceEEEEeeeecCCCC
Q 012024 142 YRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT---LQTTYSSLDVHVGQSYSVLVTADQ--PARDYYIVVSSRFTSTVL 216 (472)
Q Consensus 142 ~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~---~p~~~~~l~l~~G~R~dv~v~~~~--~~g~y~i~~~~~~~~~~~ 216 (472)
+||||+|++. ..+.|+|+||.|+|++.||... .+..+|++.|.||||++++|.+.+ .+|.|.+.+....- ...
T Consensus 184 vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H-~~~ 261 (313)
T 3tas_A 184 VEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSH-SDM 261 (313)
T ss_dssp EEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH-HHT
T ss_pred EEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHH-HHC
Confidence 9999999995 5899999999999999998766 467789999999999999998764 47888777654311 112
Q ss_pred ceEEEEEEeCCC
Q 012024 217 TTTGILHYSNSA 228 (472)
Q Consensus 217 ~~~ail~y~~~~ 228 (472)
...+++.++...
T Consensus 262 GM~~~f~V~~~d 273 (313)
T 3tas_A 262 GMVGLFLVKKPD 273 (313)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEECCC
Confidence 356677776443
No 63
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.75 E-value=1.9e-08 Score=86.47 Aligned_cols=96 Identities=8% Similarity=0.018 Sum_probs=70.5
Q ss_pred EEeecCCcEEEEEEEc--CCCCCCCeeecCC--ceEEEEe-e-----cCCCCCCCCCCCCcCCCCccceEEeCCCCEEEE
Q 012024 342 VMGADYRAFIEIVFQN--DEDIIQSYHLNGY--QFWVVGM-D-----GGQWTSASRNQYNLRDAVARVTVQVYPKSWSAI 411 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N--~~~~~HP~HlHG~--~F~Vl~~-~-----~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~i 411 (472)
.++++.|+.|.|++.| .+.+.|.||++.. .|.-+.. + ...|-+.. + ....+++|..|.++....+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP----D-TPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT----T-CTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc----c-cccccccceeeCCCceeEE
Confidence 3678999999999999 6678899999853 2211000 0 00010000 0 0134678999999999999
Q ss_pred EEEecCceeeEeeecchhHHhcccEEEEEEe
Q 012024 412 YIALDNVGMWNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 412 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 442 (472)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999875
No 64
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.73 E-value=3.4e-08 Score=79.24 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=60.5
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..+.++.|++|+| .|.+...|.||+|+..+- .+ + +. ...++|++.+.+|+...++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p-----~~-~--------~~-~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAIP-----SG-V--------NA-DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGSC-----TT-C--------CH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCC-----Cc-c--------cc-ccccccceecCCCCEEEEEe--CCCeE
Confidence 3578899999988 677777899999874220 00 0 00 01246889999999888866 58999
Q ss_pred eEeeecchhHHhcccEEEEEE
Q 012024 421 WNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V 441 (472)
|.|||| .|.+.||...+.|
T Consensus 79 y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 79 YGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEECG--GGGGGTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 5999999999987
No 65
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.72 E-value=1.4e-07 Score=99.50 Aligned_cols=235 Identities=9% Similarity=0.024 Sum_probs=145.4
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeE-EEEeCCccccceeeeEEEEcCCCeEEEEEEeCC
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK-LVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 198 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~-via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~ 198 (472)
-..+++||+...|+|+++.|+++++++.|........++.+|.... --..||.+- +..-.|.||+.+..-++++
T Consensus 86 ~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~----vTq~pI~PG~sftY~f~~~- 160 (580)
T 3sqr_A 86 RSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPG----VTQCPIAPGDTLTYKFQVT- 160 (580)
T ss_dssp EEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-
T ss_pred EEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCc----cccCCCCCCCeEEEEEECC-
Confidence 3579999998779999999999999999998755677777775432 135788753 1223589999999999997
Q ss_pred CCCceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccc------cccchhhcccccCCCCCCCCCCCCCCCC
Q 012024 199 PARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQI------DWSLNQARSIRSNLTASGPRPNPQGSYH 271 (472)
Q Consensus 199 ~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~------~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 271 (472)
..|+||-..... .+. ....+.|...+... .... .+. +|.......+...+..
T Consensus 161 q~GT~WYHsH~~--~q~~~GL~G~lIV~~p~~---~~yD----~d~~~l~l~Dw~~~~~~~~~~~~~~------------ 219 (580)
T 3sqr_A 161 QYGTTWYHSHFS--LQYGDGLFGPLIINGPAT---ADYD----EDVGVIFLQDWAHESVFEIWDTARL------------ 219 (580)
T ss_dssp CCEEEEEEECST--TGGGGTCEEEEEEECCCS---SCCS----EEEEEEEEEEECSSCHHHHHHHHTT------------
T ss_pred CCcceEEeeccc--ccccCcCEEEEEeeCccc---CCCC----ccceEEEEEEEecCCHHHHHHHHhc------------
Confidence 579999887652 121 12344444433211 0000 011 0111000000000000
Q ss_pred ccccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEE
Q 012024 272 YGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFI 351 (472)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 351 (472)
. .........|||+....-... + ..++........+.++.|+++
T Consensus 220 -------------~---~~~~~d~~liNG~~~~~c~~~---------------~-----~~~~~~~~~~~~~~v~~G~~y 263 (580)
T 3sqr_A 220 -------------G---APPALENTLMNGTNTFDCSAS---------------T-----DPNCVGGGKKFELTFVEGTKY 263 (580)
T ss_dssp -------------S---CCCCBSEEEETTBCCCCCTTC---------------C-----CTTBCCCCCCCEEECCTTCEE
T ss_pred -------------c---CCCCCceEEECCcccCCCccc---------------c-----ccccccCCCceeEEEcCCCEE
Confidence 0 000112467888753210000 0 000000112356788999999
Q ss_pred EEEEEcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC-ceeeEeeecc
Q 012024 352 EIVFQNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN-VGMWNLRSES 427 (472)
Q Consensus 352 e~vi~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn-pG~w~~HCHi 427 (472)
+|.|.|.+.. .+-|||+||.|.|++..+.. ..|...|++.|.+|+.+.|.+.++. +|.|-+.-..
T Consensus 264 RlRlINa~~~~~~~~~i~gh~~~VIa~DG~~-----------v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~ 330 (580)
T 3sqr_A 264 RLRLINVGIDSHFEFAIDNHTLTVIANDLVP-----------IVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNW 330 (580)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETTEE-----------EEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCC
T ss_pred EEEEEeccCCceeeEEeCCceEEEEEeCCcc-----------CCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEec
Confidence 9999999865 47999999999999997532 2366789999999999999999975 6888777554
No 66
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.71 E-value=1.5e-08 Score=81.40 Aligned_cols=79 Identities=8% Similarity=-0.034 Sum_probs=60.0
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..+.++.|+.|.|+ |.+...|.||+++..+- +.... ....|++.+.+|+...+.| +.||.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~~~--------------~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADTAA--------------KLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHHHH--------------HHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccccc--------------cccccccccCCCCEEEEEc--CCCeE
Confidence 35788999999987 76667899999874321 00000 0115788999999888866 89999
Q ss_pred eEeeecchhHHhcccEEEEEE
Q 012024 421 WNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V 441 (472)
|.|||+ .|...||...+.|
T Consensus 79 y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 5999999999987
No 67
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.70 E-value=9.8e-09 Score=89.63 Aligned_cols=70 Identities=21% Similarity=0.306 Sum_probs=51.7
Q ss_pred ccccccCCeeEeccCCCCCCCCCCCCC------Ccc--CCCCCCCC--eEEEEEEeCCceeeeEEecccchhhhcCceeE
Q 012024 3 LTATSIRSAFANGNGIQNRRNSFEDGV------YGT--TCPIPPGK--NFTYILQVKDQIGSFYYFPSLAFHKAAGGFGG 72 (472)
Q Consensus 3 ~~n~l~~~tsiHwHG~~~~~~~~~DGv------~~t--q~~i~pG~--~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~ 72 (472)
|+|... ...|++.+.+.++++++.. +.+ ..+|.||+ +++|.|++ ++||||||||...|...||+|.
T Consensus 75 ~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~--~pGtY~y~C~~~gH~~~GM~G~ 150 (154)
T 2cal_A 75 FINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP--TAGTYYYVCQIPGMAATGMFGK 150 (154)
T ss_dssp EEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC--CSEEEEEECCSTTTGGGTCEEE
T ss_pred EEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE--CCceEEEECCCCCHHHCCCEEE
Confidence 566422 4578888876665554311 110 12689999 99999997 7999999999988999999999
Q ss_pred EEEe
Q 012024 73 IRIL 76 (472)
Q Consensus 73 liV~ 76 (472)
|+|+
T Consensus 151 IiV~ 154 (154)
T 2cal_A 151 IVVK 154 (154)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 68
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.68 E-value=1.9e-07 Score=98.63 Aligned_cols=231 Identities=13% Similarity=0.052 Sum_probs=143.9
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeE-EEEeCCccccceeeeEEEEcC-CCeEEEEEEeCC
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK-LVEVEGTHTLQTTYSSLDVHV-GQSYSVLVTADQ 198 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~-via~DG~~~~p~~~~~l~l~~-G~R~dv~v~~~~ 198 (472)
..+++||+...|+|+++.|+++++++.|........++.+|.... --..||.+-. ..-.|.| |+.+...+++++
T Consensus 56 ~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~----tq~~I~P~G~~~~Y~f~~~q 131 (559)
T 2q9o_A 56 KVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGV----TECPIPPKGGQRTYRWRARQ 131 (559)
T ss_dssp EEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTTEEEEEEEECCS
T ss_pred EEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCcc----ccCccCCCCCeEEEEEECCC
Confidence 478999997779999999999999999998655778888876542 1246887531 1234789 999999999885
Q ss_pred CCCceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccc-cccchhhcccccCCCCCCCCCCCCCCCCccccc
Q 012024 199 PARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQI-DWSLNQARSIRSNLTASGPRPNPQGSYHYGLIN 276 (472)
Q Consensus 199 ~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~-~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 276 (472)
+|.||-..... .+. ....+.|...+... .... .+. ...+. ++.+.. .+ .
T Consensus 132 -~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~---~~~d----~d~~~l~l~-----Dw~~~~-------~~-------~ 182 (559)
T 2q9o_A 132 -YGTSWYHSHFS--AQYGNGVVGTIQINGPAS---LPYD----IDLGVFPIT-----DYYYRA-------AD-------D 182 (559)
T ss_dssp -CEEEEEEECST--TGGGGTCEEEEEEECCCS---SCCS----EEEEEEEEE-----EECSSC-------HH-------H
T ss_pred -CEEEEEEEccc--chhcCCceEEEEecCCCc---CCCc----ccceEEEEe-----ccccCC-------HH-------H
Confidence 79999887652 221 12344444433221 0000 010 00000 010000 00 0
Q ss_pred eeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEE
Q 012024 277 TTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQ 356 (472)
Q Consensus 277 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~ 356 (472)
. ................|||+.+.... ..+ ....+.++.|++++|.|.
T Consensus 183 ~----~~~~~~~~~~~~d~~liNG~~~~~~~----------~~g------------------~~~~~~v~~g~~~RlRli 230 (559)
T 2q9o_A 183 L----VHFTQNNAPPFSDNVLINGTAVNPNT----------GEG------------------QYANVTLTPGKRHRLRIL 230 (559)
T ss_dssp H----HHHHTTSCCCCBSEEEETTBCBCTTT----------CCB------------------CCCEEEECTTCEEEEEEE
T ss_pred H----hhhhhcCCCCccceeEECCccccCcC----------CCC------------------CceEEEEcCCCEEEEEEE
Confidence 0 00000000001124678887642100 000 123578899999999999
Q ss_pred cCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC-ceeeEeeecc
Q 012024 357 NDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN-VGMWNLRSES 427 (472)
Q Consensus 357 N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn-pG~w~~HCHi 427 (472)
|.+.. .+-|||+||.|+|++..+... .|...|++.|.+++.+.|.+.++. +|.|-+....
T Consensus 231 Na~~~~~~~~~i~gh~~~vi~~DG~~~-----------~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 231 NTSTENHFQVSLVNHTMTVIAADMVPV-----------NAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp ECCSSCCEEEEETTBCEEEEEETTEEE-----------EEEEESCEEECTTCEEEEEEECCSCSSEEEEEEEC
T ss_pred ecCCCceEEEEECCCceEEEecCCccc-----------CceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEe
Confidence 99865 589999999999999975421 266789999999999999999975 6777666654
No 69
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.67 E-value=2.1e-08 Score=81.66 Aligned_cols=61 Identities=7% Similarity=-0.054 Sum_probs=48.3
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCc-cCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYG-TTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.++|....+.++|+++. +||... .+..|.||++++|.| +++|+|||||+.+. ||.|.|+|+
T Consensus 44 ~~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~----gM~G~i~V~ 105 (105)
T 2ov0_A 44 TWINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP----FMRGKVVVE 105 (105)
T ss_dssp EEEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT----TCEEEEEEC
T ss_pred EEEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC----CCEEEEEEC
Confidence 35677777777887752 467654 566799999999988 47999999999864 999999985
No 70
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.64 E-value=8e-08 Score=75.84 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=57.7
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..+.++.|+.|.|+ |.+...|.+|+++. + +...++..+.+|+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~--------------~~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCC---------C--------------ccCcccceeCCCCEEEEEe--CCCEE
Confidence 35688999999886 66667899999872 0 1125778889998877766 89999
Q ss_pred eEeeecchhHHhcccEEEEEE
Q 012024 421 WNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V 441 (472)
|.|||+ .|...||...+.|
T Consensus 72 y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 72 YTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEECT--TTGGGTCEEEEEE
T ss_pred EEEEeC--CCccCCCEEEEEE
Confidence 999999 5999999999877
No 71
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.58 E-value=3.8e-07 Score=95.69 Aligned_cols=225 Identities=12% Similarity=0.109 Sum_probs=142.9
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEE-EEeCCccccceeeeEEEEcCCCeEEEEEEeCC
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKL-VEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 198 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~v-ia~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~ 198 (472)
-..+++||+...|+|+++.|+++++++.|.-......++.+|..... -..||..-. ..-.|.||+.+..-+++++
T Consensus 22 ~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~v----tq~pI~PG~~~~Y~f~~~~ 97 (534)
T 1zpu_A 22 RPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFL----TQCPIAPGSTMLYNFTVDY 97 (534)
T ss_dssp EEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECSS
T ss_pred EEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcc----ccCCcCCCCeEEEEEEeCc
Confidence 35789999977799999999999999999887557788888765421 257886531 1234789999999999986
Q ss_pred CCCceEEEEeeeecCCC-CceEEEEEEeCCCCCCCCCCCCCCCcccc-----ccchhhcccccCCCCCCCCCCCCCCCCc
Q 012024 199 PARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQID-----WSLNQARSIRSNLTASGPRPNPQGSYHY 272 (472)
Q Consensus 199 ~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~-----~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 272 (472)
..|+||-...... +. ....+.|...+... +. ....++. |.......+...+. ....+.+
T Consensus 98 ~~GT~wYH~H~~~--q~~~Gl~G~liV~~~~~----p~--~~d~e~~l~l~Dw~~~~~~~~~~~~~---~~~~~~g---- 162 (534)
T 1zpu_A 98 NVGTYWYHSHTDG--QYEDGMKGLFIIKDDSF----PY--DYDEELSLSLSEWYHDLVTDLTKSFM---SVYNPTG---- 162 (534)
T ss_dssp CCEEEEEECCSSS--GGGGTCEEEEEEECTTC----CS--CCSEEEEEEEEEECSSCHHHHHHHHS---STTCTTC----
T ss_pred cceeEEEEEcCcc--cccCcceeeEEeCCCCC----CC--CCcceEEEEeeccccCCHHHHHHHHh---ccccCCC----
Confidence 7899998776532 21 12344444443321 11 1111111 11100000000000 0000000
Q ss_pred cccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEE
Q 012024 273 GLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIE 352 (472)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve 352 (472)
...-...+.|||+.. ..+.++.|++++
T Consensus 163 ----------------~~~~~d~~liNG~~~-------------------------------------~~~~v~~g~~~R 189 (534)
T 1zpu_A 163 ----------------AEPIPQNLIVNNTMN-------------------------------------LTWEVQPDTTYL 189 (534)
T ss_dssp ----------------CCCCCSEEEETTBSS-------------------------------------CEEECCSSCEEE
T ss_pred ----------------CCCCCceEEECCCCc-------------------------------------eEEEEECCCEEE
Confidence 000012456777531 236788999999
Q ss_pred EEEEcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC--ceeeEeeecc
Q 012024 353 IVFQNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN--VGMWNLRSES 427 (472)
Q Consensus 353 ~vi~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn--pG~w~~HCHi 427 (472)
|.|.|.+.. .+-|||+||.|.|++..++.. .|...|++.|.+++.+.|.+.++. .|.|.++...
T Consensus 190 lRliNa~~~~~~~~~i~gh~~~vi~~DG~~~-----------~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 190 LRIVNVGGFVSQYFWIEDHEMTVVEIDGITT-----------EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp EEEEECCSSCCEEEEETTBCEEEEEETTEEE-----------EEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred EEEEeccCCceEEEEEcCCeeEEEeccCcCc-----------cccEeceEEECccceEEEEEEcCCCCCCcEEEEEec
Confidence 999999864 589999999999999976432 256679999999999999999875 3667777664
No 72
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.56 E-value=8.7e-08 Score=76.71 Aligned_cols=77 Identities=10% Similarity=0.114 Sum_probs=58.3
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.++++.|+.|.|+ |.+...|.+++++..+. .+ .. ...+++..+.+++...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~------~~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES------AP------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC------HH------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc------cc------cccccceecCCCCEEEEEe--CCCeEE
Confidence 4688999999886 76667899999865540 00 00 0114677788888887766 899999
Q ss_pred EeeecchhHHhcccEEEEEE
Q 012024 422 NLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V 441 (472)
.|||+ .|.++||...+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 5999999999887
No 73
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.54 E-value=9e-07 Score=91.36 Aligned_cols=223 Identities=16% Similarity=0.184 Sum_probs=141.8
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCC
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 199 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~ 199 (472)
...+.+||+...|+|+++.|+++++|+.|.... ...++.+|-... -..||..- -.|.||+.++..+++++.
T Consensus 70 ~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~-~tsiHwHGl~~~-~~~DG~pq-------~~I~PG~s~~Y~f~~~~~ 140 (481)
T 3zx1_A 70 TLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKE-ATTIHWHGVPVP-PDQDGSPH-------DPILAGEERIYRFEIPQD 140 (481)
T ss_dssp EEEEEETTBSSCCBEEEETTCEEEEEEEECSSS-CBCCEEETCCCC-GGGSCCTT-------SCBCTTCEEEEEEECCTT
T ss_pred EEEEEECCCCCCceEEEECCcEEEEEEEeCCCC-CeeEEecCcccC-CccCCCcc-------CcCCCCCeEEEEEeCCCC
Confidence 357899999777999999999999999998764 677888887542 35788742 357899999999999864
Q ss_pred -CCceEEEEeeee--cCCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCcccc
Q 012024 200 -ARDYYIVVSSRF--TSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLI 275 (472)
Q Consensus 200 -~g~y~i~~~~~~--~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~ 275 (472)
+|+||-...... ..+. ....+.|........ ...+| . +. ..+. ++.+....... +.
T Consensus 141 ~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~-~~~~~---~-~~-l~l~-----D~~~~~~g~~~-~~-------- 200 (481)
T 3zx1_A 141 SAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDA-LSHLK---E-KD-LMIS-----DLRLDENAQIP-NN-------- 200 (481)
T ss_dssp CCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCT-TTTSE---E-EE-EEEE-----EECCBTTSCCC-CC--------
T ss_pred CCceEEEeecCCCcchhhhhccceEEEEEcCcccc-ccCCC---c-ee-EEEE-----EEeccCCCccc-cc--------
Confidence 689998776421 1111 112333333332211 00111 1 11 0110 11111100000 00
Q ss_pred ceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEE
Q 012024 276 NTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVF 355 (472)
Q Consensus 276 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi 355 (472)
.. .....+ ..+ ..+.|||+.+ | .+.++.|+ +|.|
T Consensus 201 ~~-----~~~~~g-~~g-d~~lvNG~~~-----p--------------------------------~l~v~~g~--RlRl 234 (481)
T 3zx1_A 201 NL-----NDWLNG-REG-EFVLINGQFK-----P--------------------------------KIKLATNE--RIRI 234 (481)
T ss_dssp CH-----HHHHHC-CCC-SEEEETTEES-----C--------------------------------EEEEETTE--EEEE
T ss_pred cc-----hhhccC-CcC-CEEEECCccC-----c--------------------------------eEEecCCC--EEEE
Confidence 00 000000 001 2567888753 1 25678888 9999
Q ss_pred EcCCCC-CCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecc
Q 012024 356 QNDEDI-IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSES 427 (472)
Q Consensus 356 ~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi 427 (472)
.|.+.. .+-|||+||.|+||+..+|.. ..|...|++.|.+++.+.|.+.++.+|.|.+-++.
T Consensus 235 iNa~~~~~~~l~i~g~~~~vIa~DGg~~----------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~ 297 (481)
T 3zx1_A 235 YNATAARYLNLRIQGAKFILVGTDGGLI----------EKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAY 297 (481)
T ss_dssp EECCSSCCEEEEETTCEEEEEEETTEEE----------EEEEEESSEEECTTCEEEEEEECSSCEEEEEEECC
T ss_pred EecCCCeEEEEEECCCceEEEEcCCCcc----------CCceEeCeEEECCccEEEEEEEcCCCcEEEEEEec
Confidence 998854 589999999999999986532 23566799999999999999999999999998865
No 74
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.54 E-value=2.2e-07 Score=76.47 Aligned_cols=74 Identities=12% Similarity=0.201 Sum_probs=57.6
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.+.++.|+.|+|++.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46889999999999999866555444311 125678999999999999999999
Q ss_pred EeeecchhHHhcccEEEEEEec
Q 012024 422 NLRSESWARQYLGQQFYLRVYT 443 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V~~ 443 (472)
.||||+..|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999665443 888887753
No 75
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.51 E-value=3.6e-07 Score=73.30 Aligned_cols=82 Identities=9% Similarity=0.067 Sum_probs=59.6
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..++++.|+.|.| .|.+...|.+|+++..|. .+ ++. ... ...+|++.+.+|+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~~--~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TKI--SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----ccc--cccccceeeCCCCEEEEEe--CCCcE
Confidence 3578899999888 577777899999975441 00 000 000 1125677888898887766 69999
Q ss_pred eEeeecchhHHhcccEEEEEE
Q 012024 421 WNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V 441 (472)
|.|||+ .|.+.||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCEEEEEE
Confidence 999999 5999999999887
No 76
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.51 E-value=1.7e-07 Score=90.99 Aligned_cols=194 Identities=16% Similarity=0.223 Sum_probs=156.3
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeC------------CceeeeEEecccc------h
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVK------------DQIGSFYYFPSLA------F 63 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~------------~~~Gt~wYH~H~~------~ 63 (472)
.|+|.|+++|||||||+++. ++|||++.+||+|+||++|+|+|+++ +++||||||||.. .
T Consensus 71 ~~~N~l~~~~siH~HG~~~~--~~~DG~~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~ 148 (299)
T 3t9w_A 71 DLVNTTDRVLSLHPHGVDYD--VNSDGTLMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTE 148 (299)
T ss_dssp EEEECSSSCBCCEESSSBCC--GGGSCCTTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHH
T ss_pred EEEECCCCCccEEeCCcccC--CccCCCccccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchh
Confidence 58999999999999999874 57999988999999999999999985 2689999999964 4
Q ss_pred hhhcCceeEEEEeCCCCCCCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCC--CCceEEEeCCcE
Q 012024 64 HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG--SGAAFNVEQGKT 141 (472)
Q Consensus 64 q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~~~~~~v~~g~~ 141 (472)
|+++||+|+|||+++.. . ..|+|++|++++|+ +||+. ..+.++++.|++
T Consensus 149 ~~~~GL~G~liV~~~~~--~---~~d~e~~l~~~~~~------------------------~Ng~~~~~~p~l~v~~Ge~ 199 (299)
T 3t9w_A 149 GVLKGLYGALVVRRQGD--L---LPKRQFTVVFNDMM------------------------INNRAHHDAPTFEANLGER 199 (299)
T ss_dssp HHHHTCEEEEEEECTTC--C---CCSEEEEEEEETTE------------------------ETTCCTTCCCEEEEETTCE
T ss_pred hhcccccceEEEecccc--c---Cccccceeeeeeee------------------------ecCccccccccceecCCCE
Confidence 78999999999998753 1 34899999998875 34442 347899999999
Q ss_pred EEEEEEEccCCCcEeEEEeCceeEEEEeCCccccc---eeeeEEEEcCCCeEEEEEEeCC--CCCceEEEEeeeecCCCC
Q 012024 142 YRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ---TTYSSLDVHVGQSYSVLVTADQ--PARDYYIVVSSRFTSTVL 216 (472)
Q Consensus 142 ~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p---~~~~~l~l~~G~R~dv~v~~~~--~~g~y~i~~~~~~~~~~~ 216 (472)
+||||+|++.. .+.|+|+||.|+|++.|+....+ ..+|++.|.||||++++|.+.+ .+|.|.+.+....- ...
T Consensus 200 Vr~~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H-~~~ 277 (299)
T 3t9w_A 200 VEWIAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNH-SDM 277 (299)
T ss_dssp EEEEEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHH-HHT
T ss_pred EEEEEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHH-Hhc
Confidence 99999999974 68999999999999998876633 4579999999999999997654 47888887654321 011
Q ss_pred ceEEEEEEeCCC
Q 012024 217 TTTGILHYSNSA 228 (472)
Q Consensus 217 ~~~ail~y~~~~ 228 (472)
...+++.+....
T Consensus 278 GM~~~f~V~~~~ 289 (299)
T 3t9w_A 278 GMAGMFLVRNAD 289 (299)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEECCC
Confidence 245666665443
No 77
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.41 E-value=2.7e-07 Score=75.04 Aligned_cols=70 Identities=13% Similarity=0.206 Sum_probs=47.1
Q ss_pred ccccccCCeeEeccCCCCCCCCCCCCC-----CccCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeC
Q 012024 3 LTATSIRSAFANGNGIQNRRNSFEDGV-----YGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 3 ~~n~l~~~tsiHwHG~~~~~~~~~DGv-----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
++|.-..+-++|.|+.... ..+|. ..+.-.+.||++++|.|.+++.+|+|||||| .+...||.|.|+|.+
T Consensus 32 ~~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 32 FLNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVAG 106 (106)
T ss_dssp EEECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred EEECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEcC
Confidence 4555444555555554321 12332 0123358999999999976458999999999 566679999999964
No 78
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.39 E-value=9.4e-07 Score=71.10 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=58.4
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.+.++.|+.|.|++.|.+...|-|.+.+.. -...+.+|....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~---------------------------~~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLG---------------------------IDVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGT---------------------------EEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCC---------------------------cceeecCCcceeEEEecccCceE
Confidence 468899999999999998777877664322 12346678888999999999999
Q ss_pred EeeecchhHHhcccEEEEEE
Q 012024 422 NLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V 441 (472)
.|+|.. |...||...+.|
T Consensus 82 ~y~C~~--H~~~gM~G~i~V 99 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIV 99 (100)
T ss_dssp EEECTT--TGGGTCEEEEEE
T ss_pred EEECcc--ccCCCCEEEEEE
Confidence 999986 999999998876
No 79
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.39 E-value=1.9e-06 Score=88.41 Aligned_cols=220 Identities=10% Similarity=0.130 Sum_probs=136.9
Q ss_pred EEECCC-CCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCC
Q 012024 123 ILINGR-GSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAR 201 (472)
Q Consensus 123 ~liNG~-~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g 201 (472)
+++||+ ...|+|++++|+++++++.|.... ...++.+|.... -..||... -.|.||+.+..-+++++.+|
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~-~tsiHwHG~~~~-~~~DG~~~-------~~i~PG~~~~Y~f~~~~~~G 98 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTE-PTIVHWHGFDVN-WHNDAHPS-------FAITPGESYNYSFDVVNRAG 98 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSS-CBCEEEETCCCC-HHHHTCGG-------GCBCTTCEEEEEEECCSCSE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCC-ceeEEeCCccCC-CccCCCCC-------ccCCCCCEEEEEEEcCCCCC
Confidence 788999 656899999999999999999764 678888886542 24688655 34789999999999987789
Q ss_pred ceEEEEeee--ecCCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcccccCCCCCCCCCCCCCCCCcccccee
Q 012024 202 DYYIVVSSR--FTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTT 278 (472)
Q Consensus 202 ~y~i~~~~~--~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~ 278 (472)
.||-..... ...+. ....+.|...+.... ..++... .+....+. ++.+.. +. .
T Consensus 99 T~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~--~~l~~d~-~e~~l~l~-----D~~~~~--------~~-------~- 154 (448)
T 3aw5_A 99 TYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD--LGFKYGV-NDLPLVIS-----DRRFIG--------GA-------P- 154 (448)
T ss_dssp EEEEEECCTTTHHHHHHTTCCEEEEEECTTTT--TTCCBTT-TEEEEEEE-----EEEEET--------TE-------E-
T ss_pred ceEeccCCCCchHHHHhccceEEEEEeCCccc--cCCCCCC-ceEEEEEE-----eeccCC--------Cc-------c-
Confidence 999987732 11111 112333433333211 1112100 11111110 000000 00 0
Q ss_pred eEEEecc---cccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEE
Q 012024 279 KTIRLSS---SAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVF 355 (472)
Q Consensus 279 ~~~~~~~---~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi 355 (472)
..+.. ..... -...+.|||+.+ ..+.++.| +++|.|
T Consensus 155 --~~~~~~~~~~~~~-~~~~~liNG~~~-------------------------------------p~~~v~~g-~~RlRl 193 (448)
T 3aw5_A 155 --VYNPTPMEMIAGF-LGNAVLVNGVKD-------------------------------------AVFKLSGG-SYRLRL 193 (448)
T ss_dssp --ECCCCHHHHHHCC-CCSEEEETTEET-------------------------------------CEEEEEEE-EEEEEE
T ss_pred --cccccccccccCc-cccEEEECCccc-------------------------------------ceEEECCC-eEEEEE
Confidence 00000 00000 012567888753 12567889 999999
Q ss_pred EcCCCC-CCCeee--cC---CceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeEeeecc
Q 012024 356 QNDEDI-IQSYHL--NG---YQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSES 427 (472)
Q Consensus 356 ~N~~~~-~HP~Hl--HG---~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi 427 (472)
.|.+.. .+-||+ +| |.|+|++..++.. ..|...|++.|.+++.+.|.+.++ .|.|-+..+.
T Consensus 194 iNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~----------~~P~~~~~l~l~pgeR~dvlv~~~-~~~y~l~~~~ 260 (448)
T 3aw5_A 194 VNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFL----------ARPIEVRALFLAPAERAEVVVELG-EGVYLLKNTP 260 (448)
T ss_dssp EECSSSCCEEEEEEETTSCEECEEEEEETTEEE----------EEEEEESCEEECTTCEEEEEEEEC-SEEEEEEECC
T ss_pred EcCCCcceEEEEEEcCCCCCccEEEEEeCCCcc----------CCceEeceEEECCcceEEEEEECC-CCceEEEccc
Confidence 999864 589999 99 9999999976532 125567999999999999999887 5775555543
No 80
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.36 E-value=1.3e-07 Score=77.79 Aligned_cols=54 Identities=20% Similarity=0.244 Sum_probs=41.8
Q ss_pred ccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeC
Q 012024 15 GNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 15 wHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
+||+.... .|+ +..+.||++++|.|.+ +++|+||||||.+.... +|.|.|+|.+
T Consensus 59 ~H~~~i~~----~~~---~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 59 SEGFSIDA----FGV---QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp CEEEEEGG----GTE---EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred eEEEEEcC----CCc---eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 78876532 232 4568999999999998 68999999999775433 3999999974
No 81
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.36 E-value=8e-07 Score=71.70 Aligned_cols=84 Identities=8% Similarity=-0.054 Sum_probs=58.4
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCc-cceEEeCCCCEEEEEEEecCce
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVA-RVTVQVYPKSWSAIYIALDNVG 419 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~-rDTv~vp~~g~~~irf~adnpG 419 (472)
..++++.|+.|+|+ |.+...|.++++.-... .+.+... . ..+.+ .+++.+.+|+...+.| +.||
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~-----~-~~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASE-----L-KAASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHH-----H-HHTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccch-----h-hcccccccceecCCCCEEEEEe--CCCe
Confidence 45789999999986 77777899998731100 0000000 0 00222 4677788898877766 8999
Q ss_pred eeEeeecchhHHhcccEEEEEE
Q 012024 420 MWNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 420 ~w~~HCHil~H~d~GMm~~~~V 441 (472)
.|.|||+ .|...||...+.|
T Consensus 82 ~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 82 TYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp EEEEECS--TTGGGTCEEEEEE
T ss_pred EEEEEeC--CCcccCCeEEEEE
Confidence 9999999 6999999999987
No 82
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=98.34 E-value=9.7e-07 Score=87.36 Aligned_cols=193 Identities=17% Similarity=0.212 Sum_probs=157.3
Q ss_pred cccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCC------------ceeeeEEeccc------ch
Q 012024 2 SLTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKD------------QIGSFYYFPSL------AF 63 (472)
Q Consensus 2 ~~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~------------~~Gt~wYH~H~------~~ 63 (472)
.|+|.+.++++|||||+++. .++||++.+||+|+||++|+|+|++.+ ++||||||||. ..
T Consensus 90 ~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~ 167 (343)
T 3cg8_A 90 EFTNTMDVRASLHVHGLDYE--ISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTG 167 (343)
T ss_dssp EEEECSSSCBCCEESSSBCC--GGGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHH
T ss_pred EEEECCCCCeeEEecCcccC--CcCCCcccccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchh
Confidence 48999999999999999985 589999988999999999999999842 35999999996 36
Q ss_pred hhhcCceeEEEEeCCCCCCCCCCCCCCccEEEEeccccCCHHHHHHHhhcCCCCCCCCeEEECCCC--CCceEEEeCCcE
Q 012024 64 HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG--SGAAFNVEQGKT 141 (472)
Q Consensus 64 q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~~~~~~v~~g~~ 141 (472)
|+++||+|+|||+++... ..|+|++|+++|| +|||+. ..+.+.++.|++
T Consensus 168 ~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~~~d~------------------------~iNG~~~~~~~~l~v~~Ge~ 218 (343)
T 3cg8_A 168 GIRNGLYGPVIVRRKGDV-----LPDATHTIVFNDM------------------------TINNRKPHTGPDFEATVGDR 218 (343)
T ss_dssp HHHHTCEEEEEEECTTCC-----CCSEEEEEEEETT------------------------EETTCCTTCCCCEEEETTCE
T ss_pred hhhcCCeEEEEEecCCCC-----CCCceEEEEcccc------------------------eecccCCCCCccEEeCCCCE
Confidence 999999999999987532 2478999999875 688885 346899999999
Q ss_pred EEEEEEEccCCCcEeEEEeCceeEEEEeCCccccc----eeeeEEEEcCCCeEEEEEEeC--CCCCceEEEEeeeecCCC
Q 012024 142 YRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ----TTYSSLDVHVGQSYSVLVTAD--QPARDYYIVVSSRFTSTV 215 (472)
Q Consensus 142 ~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p----~~~~~l~l~~G~R~dv~v~~~--~~~g~y~i~~~~~~~~~~ 215 (472)
|||||+|.+. ..+.|+|+||.|+|+ .||.+..| ...|++.|.||||++++++++ ..+|.|.+.+....- ..
T Consensus 219 vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H-~~ 295 (343)
T 3cg8_A 219 VEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSH-SD 295 (343)
T ss_dssp EEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH-HH
T ss_pred EEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHH-Hh
Confidence 9999999997 589999999999987 46765533 457999999999999999984 267888887764311 11
Q ss_pred CceEEEEEEeCCC
Q 012024 216 LTTTGILHYSNSA 228 (472)
Q Consensus 216 ~~~~ail~y~~~~ 228 (472)
....+.+.+....
T Consensus 296 ~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 296 MGMVGLFLVKKPD 308 (343)
T ss_dssp TTCEEEEEEECTT
T ss_pred ccCcEEEEEecCC
Confidence 2356677776543
No 83
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.25 E-value=9.8e-06 Score=84.87 Aligned_cols=218 Identities=14% Similarity=0.145 Sum_probs=131.9
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCC
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPA 200 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~ 200 (472)
..+++||+...|+|+++.|+++++++.|.... ...++.+|....- ..||..-. .|.||+.++.-+.+++.+
T Consensus 58 ~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~-~tsiHwHGl~~~~-~~DG~~~~-------~i~PG~~~~Y~f~~~~~~ 128 (534)
T 3abg_A 58 DLVGYDGMSPGPTFQVPRGVETVVRFINNAEA-PNSVHLHGSFSRA-AFDGWAED-------ITEPGSFKDYYYPNRQSA 128 (534)
T ss_dssp ECBEETSCSSEEEEEEETTCCEEEEEEECSSS-CBCEEEETCCCCT-TTTTCSSS-------CBSSCSCCCEEECCCSSS
T ss_pred eEEEECCcCcCceEEEeCCcEEEEEEEECCCC-CceEEECCCcCCC-CCCCCCCC-------CCCCCCeEEEEEecCCcc
Confidence 46889999767999999999999999999875 5678888864322 47886322 278999999999888778
Q ss_pred CceEEEEeeeec--CCC-CceEEEEEEeCCCCCCCCCCCCC-CCccccccchhhcccccCCCCCCCCCCCCCCCCccccc
Q 012024 201 RDYYIVVSSRFT--STV-LTTTGILHYSNSAGPVSGPIPGG-PTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLIN 276 (472)
Q Consensus 201 g~y~i~~~~~~~--~~~-~~~~ail~y~~~~~~~~~~~p~~-p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 276 (472)
|+||-....... .+. ....+.|...+... ....+|.. ...+....+. ++.+.. .+.+....
T Consensus 129 GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~-~~~~lp~~~~~~d~~l~l~-----d~~~~~-------~g~~~~~~-- 193 (534)
T 3abg_A 129 RTLWYHDHAMHITAENAYRGQAGLYMLTDPAE-DALNLPSGYGEFDIPMILT-----SKQYTA-------NGNLVTTN-- 193 (534)
T ss_dssp CEEEEEECCTTCHHHHHHTBCEEEEEEECTTT-TTSCTTCCHHHHSCCEEEE-----EECBCS-------SSCBCCCT--
T ss_pred eeEEEecCccccchhhhhhcceEEEEEECCcc-cccCCCccCCcceEEEEEe-----eeeecC-------CCceeccC--
Confidence 999998765321 000 12334444443321 11112210 0001110010 011110 00000000
Q ss_pred eeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCCCCCCCCcccceeEEeecCCcEEEEEEE
Q 012024 277 TTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQ 356 (472)
Q Consensus 277 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~vi~ 356 (472)
....... .....|||+.+ |. +.++. ++++|.|.
T Consensus 194 -------~~~~~~~--gd~~lvNG~~~-----p~--------------------------------~~v~~-~~~RlRli 226 (534)
T 3abg_A 194 -------GELNSFW--GDVIHVNGQPW-----PF--------------------------------KNVEP-RKYRFRFL 226 (534)
T ss_dssp -------TCSSCCC--CSEEEETTEES-----CB--------------------------------CBCCS-SEEEEEEE
T ss_pred -------CCCcccc--CceeccCCccC-----ce--------------------------------EEecC-cEEEEEEE
Confidence 0000000 12477888764 21 23444 48999999
Q ss_pred cCCCC-CCCeeecC-------CceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC-ce
Q 012024 357 NDEDI-IQSYHLNG-------YQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN-VG 419 (472)
Q Consensus 357 N~~~~-~HP~HlHG-------~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn-pG 419 (472)
|.+.. .+-|||++ |.|+||+..++.. ..|...|++.|.+++.+.|.+.++. +|
T Consensus 227 Na~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~----------~~P~~~~~l~l~pgeR~dvlv~~~~~~g 288 (534)
T 3abg_A 227 DAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLL----------EHPADTSLLYISMAERYEVVFDFSDYAG 288 (534)
T ss_dssp ECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEE----------EEEEEESCEEECTTCEEEEEEECSSCTT
T ss_pred ecCCcceEEEEEecccCcCCCccEEEEEeCCCcc----------cCceEeceEEECCccEEEEEEEcCCCCC
Confidence 99865 46899987 9999999976522 2356679999999999998888865 67
No 84
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=98.23 E-value=1.3e-05 Score=83.70 Aligned_cols=237 Identities=12% Similarity=0.091 Sum_probs=132.7
Q ss_pred CCeEEECCCCCCceEEEeCCcEEEEEEEEccCC---------------------CcEeEEEeCceeEEEEeCCcccccee
Q 012024 120 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ---------------------NSLNFRIQNHKMKLVEVEGTHTLQTT 178 (472)
Q Consensus 120 ~d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~---------------------~~~~~~i~~h~~~via~DG~~~~p~~ 178 (472)
...+.+||+...|+|++++|+++++++.|.-.. ....++.+|..+. -..||..-.+..
T Consensus 46 ~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~-~~~DG~p~~~i~ 124 (513)
T 2wsd_A 46 TRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP-DDSDGYPEAWFS 124 (513)
T ss_dssp EEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC-GGGSCCTTSCBC
T ss_pred ceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC-CccCCCCccccc
Confidence 357899999767999999999999999998754 1566777776433 245887532111
Q ss_pred eeEEEEcCC---CeEEEEEEeCCCCCceEEEEeeeec--CCC-CceEEEEEEeCCCCCCCCCCCCCCCccccccchhhcc
Q 012024 179 YSSLDVHVG---QSYSVLVTADQPARDYYIVVSSRFT--STV-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARS 252 (472)
Q Consensus 179 ~~~l~l~~G---~R~dv~v~~~~~~g~y~i~~~~~~~--~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 252 (472)
.=.|.|| +++..-+.+++.+|+||-....... .+. ....+.|..++.... ...+|. ...++...+.+
T Consensus 125 --~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~lp~-~d~d~~l~l~D--- 197 (513)
T 2wsd_A 125 --KDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEK-RLKLPS-DEYDVPLLITD--- 197 (513)
T ss_dssp --GGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGG-GGCCCC-GGGEEEEEEEE---
T ss_pred --CCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccc-cccCCC-CCCcEEEEEEe---
Confidence 0124566 5447777776678999998765311 010 123444444432211 011221 00111111110
Q ss_pred cccCCCCCCC---CCCCCCCCCccccceeeEEEecccccccCCeEeEEEcCeeccCCCCccccccccccCceeecCCCCC
Q 012024 253 IRSNLTASGP---RPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISD 329 (472)
Q Consensus 253 ~~~~l~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~ 329 (472)
+.+..... ...+... .+ ... ............+.|||+.+ |
T Consensus 198 --~~~~~~~~~~~~~~~~~~--~~--~~~-----~~~~~~~~~~d~~liNG~~~-----p-------------------- 241 (513)
T 2wsd_A 198 --RTINEDGSLFYPSAPENP--SP--SLP-----NPSIVPAFCGETILVNGKVW-----P-------------------- 241 (513)
T ss_dssp --EEECTTSCEECCSSCSSC--CT--TSC-----SSCCCSCCCCSEEEETTEES-----C--------------------
T ss_pred --eecCCCCceecccccccc--cc--ccc-----ccccccccccceEEECCccc-----c--------------------
Confidence 00000000 0000000 00 000 00000000113567888764 1
Q ss_pred CCCCCCcccceeEEeecCCcEEEEEEEcCCCC-CCCeeecCC-ceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCC
Q 012024 330 NPTGGGIYQDTAVMGADYRAFIEIVFQNDEDI-IQSYHLNGY-QFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKS 407 (472)
Q Consensus 330 ~p~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~-~HP~HlHG~-~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g 407 (472)
.+.++.+ +++|.|.|.+.. .+-|||.|| .|+|++..++.. ..|...|++.|.+++
T Consensus 242 ------------~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~----------~~P~~~~~l~l~pge 298 (513)
T 2wsd_A 242 ------------YLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLL----------PRSVKLNSFSLAPAE 298 (513)
T ss_dssp ------------EEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEE----------EEEEEESEEEECTTC
T ss_pred ------------eEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcc----------cCceEeCeEEECCee
Confidence 1344554 799999999865 489999999 999999976422 125567999999999
Q ss_pred EEEEEEEecC-ceeeEe
Q 012024 408 WSAIYIALDN-VGMWNL 423 (472)
Q Consensus 408 ~~~irf~adn-pG~w~~ 423 (472)
.+.|.+.++. +|.|+.
T Consensus 299 R~dvlv~~~~~~g~~~~ 315 (513)
T 2wsd_A 299 RYDIIIDFTAYEGESII 315 (513)
T ss_dssp EEEEEEECGGGTTCEEE
T ss_pred eEEEEEECCCCCCcEEE
Confidence 9999999875 687653
No 85
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.18 E-value=5.5e-06 Score=66.30 Aligned_cols=82 Identities=10% Similarity=0.050 Sum_probs=58.2
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..++++.|+.|.| .|.+...|.++++...+. .+ .+ .... ...++.+.+.+++...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~-----~~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VD-----ASKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CC-----HHHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-cc-----cccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 4578999999988 677777899999865330 00 00 0000 0124556788888877765 69999
Q ss_pred eEeeecchhHHhcccEEEEEE
Q 012024 421 WNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V 441 (472)
|.|||+ .|...||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CCcccCCEEEEEE
Confidence 999999 5999999999877
No 86
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.05 E-value=1.4e-05 Score=82.45 Aligned_cols=86 Identities=22% Similarity=0.307 Sum_probs=71.9
Q ss_pred eEEECCCC---CCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccc---eeeeEEEEcCCCeEEEEEE
Q 012024 122 GILINGRG---SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ---TTYSSLDVHVGQSYSVLVT 195 (472)
Q Consensus 122 ~~liNG~~---~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p---~~~~~l~l~~G~R~dv~v~ 195 (472)
..+|||+. ..+.++++.|+++||+|+|.+....+.|+|+++.|+|++.||....+ ...|++.|. |++..|+++
T Consensus 379 ~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~ 457 (488)
T 3od3_A 379 ANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVK 457 (488)
T ss_dssp CEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEEC
T ss_pred eeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEE
Confidence 36999985 33568999999999999999876789999999999999999987754 357999999 999999999
Q ss_pred eCCC---CCceEEEEe
Q 012024 196 ADQP---ARDYYIVVS 208 (472)
Q Consensus 196 ~~~~---~g~y~i~~~ 208 (472)
++.. +|.|-+.+.
T Consensus 458 f~~~~~~~G~~m~HCH 473 (488)
T 3od3_A 458 FNHDAPKEHAYMAHCH 473 (488)
T ss_dssp BCSCCCGGGCEEEEES
T ss_pred eccCCCCCCCEEEeCC
Confidence 9752 356666554
No 87
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.03 E-value=2.2e-06 Score=89.75 Aligned_cols=67 Identities=13% Similarity=0.169 Sum_probs=46.0
Q ss_pred ccccccCCeeEeccCCCCCCCCCCCCCCccCCCCCCCCeEEEEEEeCCceeeeEEecccc-hhhhcCceeEEEEeCCC
Q 012024 3 LTATSIRSAFANGNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA-FHKAAGGFGGIRILSRP 79 (472)
Q Consensus 3 ~~n~l~~~tsiHwHG~~~~~~~~~DGv~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~-~q~~~Gl~G~liV~~~~ 79 (472)
|+|.....-. +||+.+.. .|+ ++.|.||++++|.|++ +++|+||||||.. ...-.||+|.|+|++++
T Consensus 527 ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 527 VTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANPGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp EEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred EEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCCEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 5565432111 58887643 233 3568999999999999 6899999999931 11113999999999753
No 88
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.97 E-value=1.7e-05 Score=64.28 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=50.2
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.+.++.|+.|+|+ |.+...|-+|++... .|. ..+ ++-.+.+|+...+.| +.||.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 4678999999885 777778999988522 110 001 122366777666655 899999
Q ss_pred EeeecchhHHhcccEEEEEE
Q 012024 422 NLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V 441 (472)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 54 89888876
No 89
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=97.92 E-value=5.3e-06 Score=66.21 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=45.2
Q ss_pred ccccccCCeeEeccCCCCCCCCCCCC--CCccCCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 3 LTATSIRSAFANGNGIQNRRNSFEDG--VYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 3 ~~n~l~~~tsiHwHG~~~~~~~~~DG--v~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
++|.-..+-++|+|+..... . .|. .+.+...+.||+++++.|. ++|+|||||| .+...||.|.|+|+
T Consensus 30 ~~n~~~~~H~~~~~~~~~p~-~-~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 30 FVNNAGFPHNIVFDEDAIPS-G-VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECSSCCEEEEECGGGSCT-T-CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred EEECCCCceEEEEeCCCCCC-c-cccccccccceecCCCCEEEEEeC---CCeEEEEEcC--CccccCCeEEEEEC
Confidence 56776567788888753211 1 111 0111234789999999884 6999999999 44557999999984
No 90
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.88 E-value=3e-05 Score=67.38 Aligned_cols=82 Identities=10% Similarity=0.048 Sum_probs=58.9
Q ss_pred EEeecCCcEEEEEEEcCC-CCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccce-------EEeCCCC--EEEE
Q 012024 342 VMGADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVT-------VQVYPKS--WSAI 411 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDT-------v~vp~~g--~~~i 411 (472)
.++++.|+.|.+++.|.+ ...|-|-++.. +. .+... |...+. ..|.||+ ...+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~~-~~~~~---------~~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKK-------GP-PYAVM---------PVIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESC-------CS-CCCSS---------CCCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------Cc-chhcc---------ccccccccccccccccCCCCceEEEE
Confidence 578999999999999974 45566555421 11 11100 001111 1567888 8899
Q ss_pred EEEecCceeeEeeecchhHHhcccEEEEEE
Q 012024 412 YIALDNVGMWNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 412 rf~adnpG~w~~HCHil~H~d~GMm~~~~V 441 (472)
+|.+ .||.+.||||+--|...||-..+.|
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9999 9999999999999999999999876
No 91
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=97.83 E-value=4.5e-06 Score=66.67 Aligned_cols=38 Identities=24% Similarity=0.473 Sum_probs=32.0
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 34 CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 34 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
..+.||+++++.| +.+|+|||||+ .+...||.|.|+|+
T Consensus 61 ~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 61 LLFAAGESFTSTF---TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EECSTTCEEEEEC---CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred cccCCCCEEEEEc---CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 3478999999988 47999999999 45567999999984
No 92
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.82 E-value=6.1e-05 Score=79.83 Aligned_cols=88 Identities=10% Similarity=0.053 Sum_probs=72.1
Q ss_pred CeEEECCCC--CCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCc------------------------cc
Q 012024 121 DGILINGRG--SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGT------------------------HT 174 (472)
Q Consensus 121 d~~liNG~~--~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~------------------------~~ 174 (472)
..+.|||+. ..+.++++.|++++|+|+|.+. ..+.|+|++|.|+|++.+|. .+
T Consensus 459 ~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 537 (612)
T 2g23_A 459 KTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred eEEEECCccCCCCCceEecCCCEEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCC
Confidence 358899984 4578999999999999999974 48999999999999987532 11
Q ss_pred ---cceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEee
Q 012024 175 ---LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSS 209 (472)
Q Consensus 175 ---~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~ 209 (472)
++...|++.|.||+++.|.++++..+|.|.+.+..
T Consensus 538 ~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHi 575 (612)
T 2g23_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHL 575 (612)
T ss_dssp CTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESS
T ss_pred CcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCc
Confidence 22357999999999999999998668988887754
No 93
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.82 E-value=4.9e-05 Score=79.62 Aligned_cols=75 Identities=9% Similarity=0.130 Sum_probs=60.0
Q ss_pred eEEeecCCcEEEEEEEcCCC---CCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecC
Q 012024 341 AVMGADYRAFIEIVFQNDED---IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDN 417 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~---~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn 417 (472)
..+.++.|+.|+|++.|.+. ..|-|+++++.+. ..+.||....++|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 46789999999999999643 4788888764321 45778899999999999
Q ss_pred ceeeEeeecc---hhHHhcccEEEEEEecC
Q 012024 418 VGMWNLRSES---WARQYLGQQFYLRVYTA 444 (472)
Q Consensus 418 pG~w~~HCHi---l~H~d~GMm~~~~V~~~ 444 (472)
||.|.||||. ..|. ||...+.|.++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999993 3454 99999988643
No 94
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.81 E-value=1.8e-05 Score=67.63 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=36.1
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.|.||+++++.|.+ +++|+||||||...+.. ||.|.|+|+
T Consensus 100 ~l~pGet~~v~f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 100 LANGNETVEVTFTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CBCTTCEEEEEEEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred ccCCCCEEEEEEEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 48999999999998 48999999999887777 999999984
No 95
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=97.79 E-value=2.4e-05 Score=61.26 Aligned_cols=37 Identities=27% Similarity=0.596 Sum_probs=30.8
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||+++++.| +.+|+|||||+. +...||.|.|+|+
T Consensus 55 ~~~~g~~~~~~f---~~~G~y~~~C~~--H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 55 AFSPGETFEATF---SEPGTYTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred eeCCCCEEEEEe---CCCEEEEEEeCC--CccCCCEEEEEEC
Confidence 478999998887 479999999994 4445999999984
No 96
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.69 E-value=6.9e-05 Score=62.36 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=32.7
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCC
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSR 78 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 78 (472)
-+.||++|+|.| +.+|+|||+|- .+...||.|.|+|.++
T Consensus 57 ~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 57 KSKINESYTLTV---TEPGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp BCCTTCCEEEEE---CSCEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 357999999998 47999999998 4456799999999873
No 97
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.60 E-value=8.1e-05 Score=62.28 Aligned_cols=40 Identities=20% Similarity=0.222 Sum_probs=33.3
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCCC
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRP 79 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 79 (472)
-+.||++|+|.| +.+|+|||||-. +...||.|.|+|.+++
T Consensus 59 ~s~pGet~s~TF---~~pG~y~y~C~~--H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 59 KGKINEEITVTL---SKPGVYMYQCAP--HVGMGMIGAIVVGEPA 98 (127)
T ss_dssp BCCTTCCCEEEC---CSCEEEEEECTT--TGGGTCEEEEEESSCT
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeCC--CCcCCcEEEEEECcCC
Confidence 357999999988 479999999984 4567999999998854
No 98
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.56 E-value=4.7e-05 Score=61.11 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||+++++.| +.+|+|||||+ .+...||.|.|+|+
T Consensus 66 ~~~pG~~~~~tf---~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 66 LSEDEPSFKAKV---STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp BBTTBCEEEECC---CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 478999999988 47999999999 55667999999984
No 99
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.53 E-value=0.00015 Score=60.36 Aligned_cols=76 Identities=9% Similarity=0.068 Sum_probs=52.5
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..++++.|++|+|+..+ ..|-+..+.. .+. .-.+.+.+.++....+.| +.||.
T Consensus 22 ~~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p------------~g~~~~~~~pg~t~s~TF--~~~G~ 74 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD---KSHNAESVRE----------VWP------------EGVAPVKGGFSKEVVFNA--EKEGL 74 (124)
T ss_dssp SEEEECTTCEEEEECSS---SSCCCEECTT----------TSC------------TTSCCCBCCTTCCEEEEC--CSSEE
T ss_pred CEEEECCCCEEEEEECC---CCccEEEeCC----------cCC------------CCccccccCCCCEEEEEe--CCCeE
Confidence 35789999999998554 5676665421 111 001222345677666655 89999
Q ss_pred eEeeecchhHHhcccEEEEEEecCC
Q 012024 421 WNLRSESWARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V~~~~ 445 (472)
|.|||-. |...||...+.|.+|.
T Consensus 75 y~Y~C~~--H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 75 YVLKCAP--HYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEEcCC--CCcCCCEEEEEECCCC
Confidence 9999974 9999999999998763
No 100
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.52 E-value=0.00014 Score=60.42 Aligned_cols=39 Identities=10% Similarity=-0.016 Sum_probs=32.6
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCC
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSR 78 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 78 (472)
-+.||++|+|.| +.+|+|||||- .+...||.|.|+|.++
T Consensus 58 ~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 58 KGGFSKEVVFNA---EKEGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp BCCTTCCEEEEC---CSSEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred ccCCCCEEEEEe---CCCeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 367999999988 46999999996 4556799999999874
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=97.48 E-value=0.00017 Score=57.39 Aligned_cols=37 Identities=22% Similarity=0.503 Sum_probs=31.2
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||+++++.|. .+|+|+|||+ .+...||.|.|+|+
T Consensus 63 ~~~~G~~~~~~f~---~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 63 LNAPGEEYSVTLT---EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp BCSTTCEEEEEEC---SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred eeCCCCEEEEEeC---CCcEEEEEcC--CccccCCEEEEEEC
Confidence 4789999998883 7999999999 45567999999984
No 102
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=97.45 E-value=9e-05 Score=58.79 Aligned_cols=37 Identities=27% Similarity=0.565 Sum_probs=31.2
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||+++++.| +.+|+|+|||+ .+...||.|.|+|+
T Consensus 61 ~~~~g~~~~~tf---~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 61 AIAPGSFYSVTL---GTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CCSCSCCEEEEC---CSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred ecCCCCEEEEEe---CCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 478999999988 47999999999 44556999999984
No 103
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.41 E-value=0.00024 Score=59.43 Aligned_cols=75 Identities=11% Similarity=-0.013 Sum_probs=50.4
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.++++.|++|.|+..|. .|-+..+.. .+ ++. ...+.+.+++...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g-----------~~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEG-----------AETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTT-----------CCCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCC-----------ccceecCCCCEEEEEe--CCCeEE
Confidence 57889999999987763 455544321 01 100 0112224666655555 899999
Q ss_pred EeeecchhHHhcccEEEEEEecCC
Q 012024 422 NLRSESWARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V~~~~ 445 (472)
.|||-. |...||-..+.|.++.
T Consensus 77 ~y~C~~--H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCAP--HVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEeCC--CCcCCcEEEEEECcCC
Confidence 999995 9999999999998754
No 104
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.41 E-value=0.0006 Score=54.13 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=54.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..++++.|+.|.|+ |.+...|-+.+... .+. + ..+.. ....+...+.++....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~----------~~p-~---g~~~~-~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDED----------AVP-A---GVDAD-AISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTT----------SSC-T---TCCHH-HHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCC----------CCc-c---ccccc-cccccccccCCCCEEEEEc--CCCEE
Confidence 45789999999986 66656776665431 110 0 00000 0113446788888777766 89999
Q ss_pred eEeeecchhHHhcccEEEEEE
Q 012024 421 WNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V 441 (472)
|.|+|-+ |..+||-..+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999997 998999998876
No 105
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.41 E-value=0.00019 Score=57.08 Aligned_cols=37 Identities=24% Similarity=0.436 Sum_probs=31.2
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||+++++.|. .+|+|||||+ .+...||.|.|+|+
T Consensus 63 ~~~~G~~~~~tf~---~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 63 LNAKGETFEVALS---NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp BCSTTCEEEEECC---SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred ccCCCCEEEEEEC---CCceEEEEcC--CCcccCCEEEEEEC
Confidence 4789999998873 7999999999 45567999999984
No 106
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=97.39 E-value=0.00015 Score=61.80 Aligned_cols=43 Identities=16% Similarity=0.283 Sum_probs=38.0
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeC
Q 012024 34 CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 34 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
..|.||++.++.|.+ +.+|+|||||+...+...||.|.|+|.+
T Consensus 98 ~~l~pG~~~~~~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 98 AMLNAGESGSVTFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp CCBCTTEEEEEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred eeeCCCceeEEEEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 348999999999998 5799999999987778889999999964
No 107
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.39 E-value=0.00036 Score=57.96 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=51.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
..++++.|++|.|+..|. .|-+..+.. .+. +.. +.+.+.+++...+.| +.||.
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~P-~g~-----------~~f~~~pg~t~s~TF--~~pG~ 73 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE----------ILP-EGV-----------ESFKSKINESYTLTV--TEPGL 73 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT----------SSC-TTC-----------CCCBCCTTCCEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC----------cCC-CCc-----------cceecCCCCEEEEEe--CCCeE
Confidence 357899999999998872 355544321 110 000 112234677666666 89999
Q ss_pred eEeeecchhHHhcccEEEEEEecC
Q 012024 421 WNLRSESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 421 w~~HCHil~H~d~GMm~~~~V~~~ 444 (472)
|.|+|-. |...||-..+.|.++
T Consensus 74 y~y~C~~--H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 74 YGVKCTP--HFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEEECGG--GTTTTCEEEEEESSS
T ss_pred EEEEeCC--CCcCCcEEEEEECCC
Confidence 9999995 999999999999863
No 108
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.32 E-value=0.00018 Score=57.44 Aligned_cols=39 Identities=15% Similarity=0.225 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||++.+|.|+. +.+|+|.|+|.. +...||.|.|+|+
T Consensus 62 ~~~pg~~~~~~~t~-~~~G~Y~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 62 VVESGKEKNITVKP-KSAGTYELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EECTTCEEEEEECC-CSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred eecCCcceeEEEec-ccCceEEEECcc--ccCCCCEEEEEEC
Confidence 37899999999998 689999999974 4457999999996
No 109
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.17 E-value=0.0011 Score=53.53 Aligned_cols=71 Identities=11% Similarity=-0.006 Sum_probs=49.1
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.+.++.|+.|.|+ |.+...|-+++....- |. ..+ ++-.+.+|....+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-------~~-------------~~~-~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE-------------DAF-RGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-------Cc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 4678999999987 7776678776653210 00 001 223456777776666 899999
Q ss_pred EeeecchhHHhcccEEEEEE
Q 012024 422 NLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V 441 (472)
.|+|-+ |. ||-..+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999988 65 99888876
No 110
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=97.14 E-value=0.00068 Score=56.35 Aligned_cols=38 Identities=13% Similarity=0.140 Sum_probs=31.7
Q ss_pred CCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCC
Q 012024 36 IPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSR 78 (472)
Q Consensus 36 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 78 (472)
+.||++++|.| +.+|+|||+|-. +...||.|.|+|.++
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVVKF---DKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEEEC---CSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred cCCCCEEEEEe---CCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 57999988888 469999999974 445799999999874
No 111
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.13 E-value=0.00067 Score=57.15 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=31.1
Q ss_pred CCCCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 33 TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 33 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
...+.||++++|.| +.+|+|||||-.|. ||.|.|+|+
T Consensus 96 s~~l~pG~t~~~tF---~~~G~y~y~C~~H~----gM~G~I~V~ 132 (132)
T 3c75_A 96 GEMMTKDQAYAITF---NEAGSYDYFCTPHP----FMRGKVIVE 132 (132)
T ss_dssp CCCBCTTEEEEEEE---CSCEEEEEECSSCT----TCEEEEEEC
T ss_pred ccccCCCCEEEEEc---CCCEEEEEEeCCCc----CCEEEEEEC
Confidence 34589999999988 47999999997653 999999985
No 112
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=97.11 E-value=0.0008 Score=55.90 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=31.3
Q ss_pred CCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCC
Q 012024 36 IPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSR 78 (472)
Q Consensus 36 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 78 (472)
..||++++|.| +.+|+|||+|-. +...||.|.|+|.++
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 58 SKINENYVLTV---TQPGAYLVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp CCTTCCEEEEC---CSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred cCCCCEEEEEe---CCCEEEEEEeCC--cccCCCEEEEEEcCC
Confidence 46899988888 479999999974 445799999999874
No 113
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.03 E-value=0.0015 Score=54.98 Aligned_cols=71 Identities=11% Similarity=-0.006 Sum_probs=49.9
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.++++.|+.|+|+ |.+...|-+++....- |. ..+ ++-.+.+|+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~~-------g~-------------~~~-~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE-------------DAF-RGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCCC-------Cc-------------ccc-cccccCCCCEEEEEc--CCCEEE
Confidence 4688999999986 7776778877643210 00 011 233466788777666 799999
Q ss_pred EeeecchhHHhcccEEEEEE
Q 012024 422 NLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V 441 (472)
.|||-+ |. ||-..+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999988 65 99988876
No 114
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.91 E-value=0.00075 Score=56.53 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=35.5
Q ss_pred CCCCCCeEEEEEEeC--CceeeeEEecccchhhhcCceeEEEEeC
Q 012024 35 PIPPGKNFTYILQVK--DQIGSFYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
-|.||++++..|+++ .++|+|||.|-...+.. ||.|-|+|.+
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 479999999999984 37999999997666666 8999999964
No 115
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.89 E-value=0.0009 Score=53.09 Aligned_cols=37 Identities=16% Similarity=0.081 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||+++++.| +.+|+|||+|-.| ...||.|.|+|+
T Consensus 62 ~~~~g~~~~~tf---~~~G~y~y~C~~H--~~~gM~G~I~V~ 98 (98)
T 1iuz_A 62 LNSKGETVVRKL---STPGVYGVYCEPH--AGAGMKMTITVQ 98 (98)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECTTT--GGGTCEEEEEEC
T ss_pred ccCCCCEEEEEc---CCCEEEEEEchhh--ccCCCEEEEEEC
Confidence 478999999988 4799999999864 445999999984
No 116
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.81 E-value=0.00087 Score=58.61 Aligned_cols=42 Identities=17% Similarity=0.146 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEEEeC-CceeeeEEecccchhhhcCceeEEEEeC
Q 012024 35 PIPPGKNFTYILQVK-DQIGSFYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
-|.||+++++.|.++ -++|+|||+|-...+.. ||.|-|+|.+
T Consensus 125 ~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred eeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 489999999999873 16999999997765665 8999999964
No 117
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.73 E-value=0.0037 Score=51.83 Aligned_cols=74 Identities=5% Similarity=0.012 Sum_probs=47.8
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.++++.|++|.|+..+. .|-+.++- + ..++... .+.+.+|....+. ++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~-~~p~~~~-----------~~~~~pG~t~~~t--F~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------D-MIPEGAE-----------KFKSKINENYVLT--VTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------T-CSCTTCC-----------CCBCCTTCCEEEE--CCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------c-cCCCCcc-----------ceecCCCCEEEEE--eCCCEEE
Confidence 47889999999876542 45554431 1 0011000 1122466655444 4889999
Q ss_pred EeeecchhHHhcccEEEEEEecC
Q 012024 422 NLRSESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V~~~ 444 (472)
.|+|-. |...||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESSS
T ss_pred EEEeCC--cccCCCEEEEEEcCC
Confidence 999985 999999999999764
No 118
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.66 E-value=0.0028 Score=52.52 Aligned_cols=36 Identities=8% Similarity=0.002 Sum_probs=30.4
Q ss_pred CCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEeCC
Q 012024 36 IPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSR 78 (472)
Q Consensus 36 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 78 (472)
+.||++++|.| +.+|+|||+|-.|.. |.|.|+|.+.
T Consensus 58 ~~~g~t~~~tF---~~~G~y~y~C~~H~~----M~G~I~V~~~ 93 (122)
T 2ux6_A 58 SKINENYKVTF---TAPGVYGVKCTPHPF----MVGVVQVGDA 93 (122)
T ss_dssp CCTTCCEEEEE---CSCEEEEEEETTEEE----EEEEEEESSS
T ss_pred cCCCCEEEEEe---CCCEEEEEEeCCCcc----CEEEEEEeCC
Confidence 57899999988 479999999987543 9999999874
No 119
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=96.65 E-value=0.0075 Score=64.07 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=69.0
Q ss_pred CeEEECCCC--CCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccc------------------------
Q 012024 121 DGILINGRG--SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT------------------------ 174 (472)
Q Consensus 121 d~~liNG~~--~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~------------------------ 174 (472)
..+.+||+. ....+.++.|++++|.|+|.+.. .+-|+|+||.|+||+.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 356677764 23568899999999999999865 799999999999998766422
Q ss_pred ---cceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEee
Q 012024 175 ---LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSS 209 (472)
Q Consensus 175 ---~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~ 209 (472)
++...|++.+.+|+.+.|.+++...+|.|.+.+..
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHi 575 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHL 575 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESS
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCC
Confidence 11235899999999999999965578987777654
No 120
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.61 E-value=0.0037 Score=51.79 Aligned_cols=74 Identities=9% Similarity=0.061 Sum_probs=47.7
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.++++.|++|.|+..+. .|-+.++- +.. ++.. ..+.+.++....+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n~~~---~H~v~~~~----------~~~-p~~~-----------~~~~~~pG~t~~~tF--~~~G~y 74 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDK---GHNVETIK----------GMA-PDGA-----------DYVKTTVGQEAVVKF--DKEGVY 74 (123)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECT----------TSS-CTTC-----------CCCBCCTTSCEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CcEEEEec----------ccC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 46889999998865442 45444431 101 0000 112234677655544 889999
Q ss_pred EeeecchhHHhcccEEEEEEecC
Q 012024 422 NLRSESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V~~~ 444 (472)
.|+|-. |...||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 75 GFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp EEECST--TTTTTCEEEEEESSC
T ss_pred EEEeCC--ccccCCEEEEEEcCC
Confidence 999985 999999999999764
No 121
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.55 E-value=0.0021 Score=51.85 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=30.0
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.+.||+++++.| +.+|+|+|+|-.|. ||.|.|+|+
T Consensus 72 ~l~~g~~~~~tf---~~~G~y~~~C~~H~----~M~G~I~V~ 106 (106)
T 1id2_A 72 MMTKDQAYAITF---NEAGSYDYFCTPHP----FMRGKVIVE 106 (106)
T ss_dssp CBCTTEEEEEEE---CSCEEEEEECSSCT----TCEEEEEEC
T ss_pred ccCCCCEEEEEe---CCCEEEEEEeCCCC----CCEEEEEEC
Confidence 478999999888 47999999998753 999999984
No 122
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=96.22 E-value=0.0048 Score=51.57 Aligned_cols=42 Identities=26% Similarity=0.257 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEEEeC-Ccee-eeEEecccchhhhcCceeEEEEeC
Q 012024 35 PIPPGKNFTYILQVK-DQIG-SFYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~-~~~G-t~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
.|.||++++..|.++ -.+| +|||.|-...+.. ||.|.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 479999999999984 0355 4999997666666 8999999963
No 123
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=96.19 E-value=0.0044 Score=51.71 Aligned_cols=42 Identities=24% Similarity=0.197 Sum_probs=34.4
Q ss_pred CCCCCCeEEEEEEeC-Cceee-eEEecccchhhhcCceeEEEEeC
Q 012024 35 PIPPGKNFTYILQVK-DQIGS-FYYFPSLAFHKAAGGFGGIRILS 77 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 77 (472)
.|.||+++++.|.++ =.+|+ |+|.|-...+.. ||.|.|+|.+
T Consensus 85 ~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 85 VIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp CBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 479999999999984 15885 999998766666 8999999963
No 124
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.15 E-value=0.015 Score=60.02 Aligned_cols=76 Identities=11% Similarity=0.121 Sum_probs=58.3
Q ss_pred eeEEeecCCcEEEEEEEcCC---CCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEec
Q 012024 340 TAVMGADYRAFIEIVFQNDE---DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALD 416 (472)
Q Consensus 340 ~~~~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad 416 (472)
...+.++.|+.|+|++.|.+ +..|-|-+.+... -+.+.||....+.|.++
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcC
Confidence 34677899999999999974 5677777654321 12566788999999999
Q ss_pred CceeeEeeecchhHH-hcccEEEEEEe
Q 012024 417 NVGMWNLRSESWARQ-YLGQQFYLRVY 442 (472)
Q Consensus 417 npG~w~~HCHil~H~-d~GMm~~~~V~ 442 (472)
.||.|.++|...-|. |.+|...+.|.
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEe
Confidence 999999999975554 46788888764
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.13 E-value=0.022 Score=47.93 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=50.3
Q ss_pred EeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeE
Q 012024 343 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 422 (472)
Q Consensus 343 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 422 (472)
+.++.|+.|+|++.|.+ ..|- |.|-+. .--+.+.||....+.|.++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~--------------------~~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGT--------------------NINVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTS--------------------SCEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCC--------------------CceeEeCCCCcEEEEEEcCCCEEEE
Confidence 57899999999999975 4443 332111 1113456777788999999999999
Q ss_pred eeecc---hhHHhcccEEEEEEe
Q 012024 423 LRSES---WARQYLGQQFYLRVY 442 (472)
Q Consensus 423 ~HCHi---l~H~d~GMm~~~~V~ 442 (472)
++|.. ..| .+|-..+.|.
T Consensus 114 ~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTS--TTCEEEEEEE
T ss_pred EECcccCCCCc--CCCEEEEEEE
Confidence 99965 335 5888888775
No 126
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.85 E-value=0.0066 Score=50.63 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEEEeCC-ceee-eEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVKD-QIGS-FYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
.|.||++++..|.++. .+|+ |||.|-...+.. ||.|-|+|.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 4899999999999840 4776 999998766666 899999984
No 127
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.79 E-value=0.021 Score=47.19 Aligned_cols=72 Identities=6% Similarity=0.028 Sum_probs=45.9
Q ss_pred EEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceee
Q 012024 342 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 421 (472)
Q Consensus 342 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 421 (472)
.+.++.|+.|.|+. .+. .|-+++.. +.+.. .. ..+.+.++....+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n--~d~-~H~v~~~~----------~~~p~-~~-----------~~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFIP--TDK-GHNVETIK----------GMIPD-GA-----------EAFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEEE--SSS-SCCCEECT----------TCSCT-TC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEE--CCC-CcEEEEcc----------cccCC-Cc-----------ceeecCCCCEEEEEe--CCCEEE
Confidence 57889999999874 332 56666543 11110 00 011234667655555 899999
Q ss_pred EeeecchhHHhcccEEEEEEecC
Q 012024 422 NLRSESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 422 ~~HCHil~H~d~GMm~~~~V~~~ 444 (472)
.|+|-+ |.. |-..+.|.++
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp EEEETT--EEE--EEEEEEESSS
T ss_pred EEEeCC--Ccc--CEEEEEEeCC
Confidence 999988 555 8999988763
No 128
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.62 E-value=0.042 Score=47.86 Aligned_cols=87 Identities=6% Similarity=-0.045 Sum_probs=59.7
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CCeeecCCceEEEEeec-----------C--CCCCCCCCCCCcCCCCccceEE
Q 012024 342 VMGA-DYRAFIEIVFQNDEDII-----QSYHLNGYQFWVVGMDG-----------G--QWTSASRNQYNLRDAVARVTVQ 402 (472)
Q Consensus 342 ~~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~~~-----------g--~~~~~~~~~~n~~~p~~rDTv~ 402 (472)
.++| +.|+.|.|++.|.+..+ |-|-| ...+. + .|-+.. ..-....|..
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~~~~v~~~~m~~~~~~~v~~~------d~~vl~~t~~ 125 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAEDMDGVFKDGVGAADTDYVKPD------DARVVAHTKL 125 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGGGHHHHHHHHGGGGGGTTSCTT------CTTEEEECCC
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCcchhhhHHHhhhcccccccccc------ccchhcccee
Confidence 3688 89999999999987542 54433 22210 0 010000 0012335667
Q ss_pred eCCCCEEEEEEEec--CceeeEeeecchhHHhcccEEEEEEe
Q 012024 403 VYPKSWSAIYIALD--NVGMWNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 403 vp~~g~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 442 (472)
|.+|+...|.|.++ .||.|-|+|-+--|.. ||-..+.|.
T Consensus 126 l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 126 IGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp BCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 88999999999988 8999999999878888 898888875
No 129
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.19 E-value=0.081 Score=46.04 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=54.5
Q ss_pred EeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeE
Q 012024 343 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 422 (472)
Q Consensus 343 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 422 (472)
+.++.|+.|+|.++|. +..|-|-+=.. .=-+.+-||....+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------------------------gik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGT---------------------------NINVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTS---------------------------SCEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCC---------------------------CeEEEecCCceeEEEEEeCCCEEEE
Confidence 5689999999999997 45666655211 1123455777788999999999999
Q ss_pred eeecc-hhHHhcccEEEEEEec
Q 012024 423 LRSES-WARQYLGQQFYLRVYT 443 (472)
Q Consensus 423 ~HCHi-l~H~d~GMm~~~~V~~ 443 (472)
+.|.. --+-+.+|-..+.|.+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99985 3456789999988753
No 130
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.14 E-value=0.11 Score=43.12 Aligned_cols=87 Identities=8% Similarity=0.039 Sum_probs=60.0
Q ss_pred EEeecCC-cEEEEEEEcCCCC-----CCCeeecCCceEEEEeec-----------C---CCCCCCCCCCCcCCCCccceE
Q 012024 342 VMGADYR-AFIEIVFQNDEDI-----IQSYHLNGYQFWVVGMDG-----------G---QWTSASRNQYNLRDAVARVTV 401 (472)
Q Consensus 342 ~~~~~~g-~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~~~-----------g---~~~~~~~~~~n~~~p~~rDTv 401 (472)
.++++.| +.|.+++.|.+.. .|-|-| ...+. | .|-+.. ..-....+.
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~v~~~------~~~~~~~t~ 85 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHNWVL-------AKSADVGDVAKEGAHAGADNNFVTPG------DKRVIAFTP 85 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBCCEE-------EEGGGHHHHHHHHHTTCGGGTTSCTT------CTTCSEECC
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccceEE-------ecCcchhhhHHHhhhccccccccccc------cccceeeee
Confidence 4788999 9999999998754 365433 22210 0 010000 001123566
Q ss_pred EeCCCCEEEEEEEec---CceeeEeeecchhHHhcccEEEEEEe
Q 012024 402 QVYPKSWSAIYIALD---NVGMWNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 402 ~vp~~g~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 442 (472)
.|.||+...|.|.++ .||.|-|.|-+--|.. ||-..+.|.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 788999999999997 8999999998877888 898888875
No 131
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.40 E-value=0.038 Score=57.12 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEecccc-hhhhcCceeEEEEeCC
Q 012024 35 PIPPGKNFTYILQVKDQIGSFYYFPSLA-FHKAAGGFGGIRILSR 78 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 78 (472)
-+.||++.++.|.+ +++|+|||+|..- ...-.+|.|-|+|+++
T Consensus 595 DaiPGrtnsvtFta-dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 595 EISPQQTSSITFVA-DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EECTTCEEEEEEEC-CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred eeCCCCeEEEEEEc-CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 37899999999999 6899999999842 2222579999999863
No 132
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.54 E-value=0.066 Score=44.07 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=30.4
Q ss_pred CCCCCCeEEEEEEeC--CceeeeEEecccchhhhcCceeEEEEe
Q 012024 35 PIPPGKNFTYILQVK--DQIGSFYYFPSLAFHKAAGGFGGIRIL 76 (472)
Q Consensus 35 ~i~pG~~~~Y~~~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 76 (472)
-|.||++++..|+.+ ..+|+|.|-|- .+. ||.|-|+|.
T Consensus 86 ~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 86 LIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred eeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 489999999999985 27999999999 344 899999984
No 133
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=93.53 E-value=0.21 Score=41.43 Aligned_cols=91 Identities=8% Similarity=-0.012 Sum_probs=59.1
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CCeeecCCceEEEEeecCCCCC--------CCCCCC-CcCCC-CccceEEeCC
Q 012024 342 VMGA-DYRAFIEIVFQNDEDII-----QSYHLNGYQFWVVGMDGGQWTS--------ASRNQY-NLRDA-VARVTVQVYP 405 (472)
Q Consensus 342 ~~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~-n~~~p-~~rDTv~vp~ 405 (472)
.+++ +.|+.|.+++.|.+..+ |-|-| .... .+.. .....+ .-.++ ....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi--------~~~~-~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV--------SKKS-DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE--------EETT-HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE--------cccc-chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 4678 88999999999988553 65433 2210 0000 000000 00011 1234566899
Q ss_pred CCEEEEEEEec--Ccee-eEeeecchhHHhcccEEEEEEe
Q 012024 406 KSWSAIYIALD--NVGM-WNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 406 ~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 442 (472)
|+...|.|.+. .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999878888 899888875
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=93.52 E-value=0.41 Score=39.64 Aligned_cols=86 Identities=9% Similarity=-0.011 Sum_probs=58.7
Q ss_pred EEee-cCCcEEEEEEEcCCCC-----CCCeeecCCceEEEEeec-----------C---CCCCCCCCCCCcCCC-Cccce
Q 012024 342 VMGA-DYRAFIEIVFQNDEDI-----IQSYHLNGYQFWVVGMDG-----------G---QWTSASRNQYNLRDA-VARVT 400 (472)
Q Consensus 342 ~~~~-~~g~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~~~-----------g---~~~~~~~~~~n~~~p-~~rDT 400 (472)
.+++ +.|+.|.+++.|.+.. .|-|-| ...+. | .|-+. .++ ....|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~t 84 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVL-------TKDADKQAVATDGMGAGLAQDYVKA-------GDTRVIAHT 84 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCEE-------EEGGGHHHHHHHHHHHCGGGTTSCT-------TCTTEEEEC
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEEE-------cCccchhhhHHHhhhhccccccccc-------ccccceeee
Confidence 4788 8899999999998854 365433 22210 0 01000 011 12345
Q ss_pred EEeCCCCEEEEEEEec--Ccee-eEeeecchhHHhcccEEEEEEe
Q 012024 401 VQVYPKSWSAIYIALD--NVGM-WNLRSESWARQYLGQQFYLRVY 442 (472)
Q Consensus 401 v~vp~~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 442 (472)
..|.||+...|-|.++ .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 85 ~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 85 KVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 5688999999999998 7866 999998877888 898888874
No 135
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.06 E-value=0.44 Score=39.42 Aligned_cols=92 Identities=8% Similarity=-0.010 Sum_probs=58.2
Q ss_pred EEee-cCCcEEEEEEEcCCCC-----CCCeeecCCceEEEEeecC------CCCCCCCCCC-CcCCC-CccceEEeCCCC
Q 012024 342 VMGA-DYRAFIEIVFQNDEDI-----IQSYHLNGYQFWVVGMDGG------QWTSASRNQY-NLRDA-VARVTVQVYPKS 407 (472)
Q Consensus 342 ~~~~-~~g~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~-n~~~p-~~rDTv~vp~~g 407 (472)
.+++ +.|+.|.+++.|.+.. .|-|-| ...+.- .........+ .-.++ ....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 4788 8999999999998754 365433 221100 0000000000 00011 123455689999
Q ss_pred EEEEEEEec--Ccee-eEeeecchhHHhcccEEEEEE
Q 012024 408 WSAIYIALD--NVGM-WNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 408 ~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 441 (472)
...|.|.+. .+|. |-|.|-+--|.. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7876 999999888888 88888876
No 136
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=88.56 E-value=1.7 Score=35.56 Aligned_cols=88 Identities=8% Similarity=0.082 Sum_probs=57.3
Q ss_pred eEEeecC-CcEEEEEEEcCCCC-----CCCeeecCCceEEEEeecCCCCC---C----C-CCCC-Cc-CCCCccceEEeC
Q 012024 341 AVMGADY-RAFIEIVFQNDEDI-----IQSYHLNGYQFWVVGMDGGQWTS---A----S-RNQY-NL-RDAVARVTVQVY 404 (472)
Q Consensus 341 ~~~~~~~-g~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~---~----~-~~~~-n~-~~p~~rDTv~vp 404 (472)
..++++. |+.|.++|.|.+.. .|-| ||.... .... + . ...| .. .......|..|.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~--------Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~ 88 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNW--------VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIG 88 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCC--------EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceE--------EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeC
Confidence 3477875 99999999998854 3643 444321 0000 0 0 0011 00 112455777899
Q ss_pred CCCEEEEEEEec---CceeeEeeecchhHHhcccEEEEEE
Q 012024 405 PKSWSAIYIALD---NVGMWNLRSESWARQYLGQQFYLRV 441 (472)
Q Consensus 405 ~~g~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V 441 (472)
||+...|-|.+. .+|.|-|-|- -|. ||-..+.|
T Consensus 89 pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 89 SGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999999999987 8999999999 688 89888876
No 137
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=86.53 E-value=5.5 Score=33.00 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=44.8
Q ss_pred CceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeee
Q 012024 131 GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 210 (472)
Q Consensus 131 ~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~ 210 (472)
+..+.++.|+++||++-|.. -.+.|.+.+..+ .+.+.||+.-++.+.++ .+|.|....+..
T Consensus 59 P~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~-~~G~y~~~C~e~ 119 (135)
T 2cua_A 59 PNPIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFK-RPGEYRIICNQY 119 (135)
T ss_dssp SSSEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECC-SCEEEEEECCSC
T ss_pred CCEEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcC-CCEEEEEECccc
Confidence 35799999999999988864 355555544332 24577898888888888 689999877543
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=81.53 E-value=9.7 Score=32.79 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=45.8
Q ss_pred CceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeee
Q 012024 131 GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 210 (472)
Q Consensus 131 ~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~ 210 (472)
+..+.++.|+.+||++-|.. -.+.|.+.+..+ .+.+.||+.-.+.+.++ .+|.|+...+..
T Consensus 92 Pn~l~VP~G~~Vr~~vTS~D--ViHsf~IP~lgi----------------k~da~PG~~n~~~~~~~-kpG~y~g~Cse~ 152 (168)
T 3s8f_B 92 PNPIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFK-RPGEYRIICNQY 152 (168)
T ss_dssp SSSEEEETTSEEEEEEECSS--SCEEEEETTSSC----------------EEEECTTBCEEEEEECC-SCEEEEEECCSC
T ss_pred cCEEEEeCCCeEEEEEecCC--ceEEEEECCCCe----------------EEEecCCceeEEEEEeC-CCEEEEEECCcC
Confidence 35789999999999998863 466666665432 23566898888888888 589999887653
No 139
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=78.31 E-value=3.1 Score=37.13 Aligned_cols=74 Identities=5% Similarity=0.080 Sum_probs=52.0
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
+.+.++.|+.|++.|++.+ ..|-|-+ -+-+ =-+.+-||....+.|.++.||.
T Consensus 41 n~l~lP~g~~V~~~lTS~D-ViHSF~I-------P~lg--------------------vK~daiPGr~n~l~~~~~~pG~ 92 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS-VMHSFFI-------PRLG--------------------SQIYAMAGMQTRLHLIANEPGT 92 (205)
T ss_dssp SEEEEETTSCEEEEEEESS-SCEEEEE-------GGGT--------------------EEEEECTTCCEEEEECCSSSEE
T ss_pred ceEEEeCCCEEEEEEecCC-ceeeEEe-------cccC--------------------cEEEecCCceEEEEEEeCCCeE
Confidence 3467899999999999875 4454443 2221 1122335777788999999999
Q ss_pred eEeeecchhHH-hcccEEEEEEe
Q 012024 421 WNLRSESWARQ-YLGQQFYLRVY 442 (472)
Q Consensus 421 w~~HCHil~H~-d~GMm~~~~V~ 442 (472)
|...|--+-.. +..|-..++|.
T Consensus 93 y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 93 YDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEE
T ss_pred EEEEcccccccchhhceEEEEEE
Confidence 99999876544 45666777776
No 140
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=76.69 E-value=4.2 Score=38.55 Aligned_cols=77 Identities=6% Similarity=0.131 Sum_probs=55.4
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
+.+.++.|+.|++.+++.+ ..|-|.+= + .+--+.+-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~iP-------~--------------------lg~k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTIP-------A--------------------FAVKQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEEG-------G--------------------GTEEEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeEc-------c--------------------cCceEEecCCceEEEEEEeCCCEE
Confidence 3467899999999999965 55655552 1 112233346777789999999999
Q ss_pred eEeeecchh-HHhcccEEEEEEecCC
Q 012024 421 WNLRSESWA-RQYLGQQFYLRVYTAS 445 (472)
Q Consensus 421 w~~HCHil~-H~d~GMm~~~~V~~~~ 445 (472)
|...|.-+- .-|..|-..++|+.++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~ 266 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQE 266 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHH
Confidence 999999644 4466788888887653
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=74.08 E-value=23 Score=28.52 Aligned_cols=67 Identities=16% Similarity=0.362 Sum_probs=45.4
Q ss_pred EEEEEEEccCCCcEeEEEe-CceeEEEEe--CCcccc--------ceeeeEEEEcCCCeEEEEEEeCC--CCCceEEEEe
Q 012024 142 YRLRISNVGLQNSLNFRIQ-NHKMKLVEV--EGTHTL--------QTTYSSLDVHVGQSYSVLVTADQ--PARDYYIVVS 208 (472)
Q Consensus 142 ~rlR~in~~~~~~~~~~i~-~h~~~via~--DG~~~~--------p~~~~~l~l~~G~R~dv~v~~~~--~~g~y~i~~~ 208 (472)
..|-+.|.+.. ...|.+. |+.+.++-. +|..+- .+......|.|||...+-...++ .+|.|.+.+.
T Consensus 22 ~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 22 FNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 35667787765 5666664 344344433 465441 23467899999999999999884 5799999875
Q ss_pred e
Q 012024 209 S 209 (472)
Q Consensus 209 ~ 209 (472)
.
T Consensus 101 l 101 (120)
T 3isy_A 101 F 101 (120)
T ss_dssp E
T ss_pred E
Confidence 4
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=70.45 E-value=7.1 Score=36.31 Aligned_cols=77 Identities=9% Similarity=0.163 Sum_probs=53.5
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
+.+.++.|+.|++.+++.+ ..|-|-+ -+-+ ...| +-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~D-ViHsf~i-------p~l~-----------------~k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VIHSWTV-------PAFG-----------------VKQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEEEEE-------GGGT-----------------EEEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEECc-ccceeee-------cccC-----------------ceEE---ecCCceeEEEEecCCcEE
Confidence 3477899999999999875 4455444 2221 1123 335677788999999999
Q ss_pred eEeeecchhHH-hcccEEEEEEecCC
Q 012024 421 WNLRSESWARQ-YLGQQFYLRVYTAS 445 (472)
Q Consensus 421 w~~HCHil~H~-d~GMm~~~~V~~~~ 445 (472)
|...|--+-.. |..|-..++|+.++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEE 248 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHH
Confidence 99999865544 55677778776553
No 143
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=67.72 E-value=13 Score=29.82 Aligned_cols=47 Identities=17% Similarity=0.346 Sum_probs=32.8
Q ss_pred cEEEEEEEEccCC-CcEeEEEeCc-eeEEEEeCCccccceeeeEEEEcCCCeEEEEEEe
Q 012024 140 KTYRLRISNVGLQ-NSLNFRIQNH-KMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTA 196 (472)
Q Consensus 140 ~~~rlR~in~~~~-~~~~~~i~~h-~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~ 196 (472)
-.|+|||+|.+.. ..|.|+++|. .+.+++ + ..+.+.||+..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 3699999999865 6778888774 244332 1 14899999987766654
No 144
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=61.04 E-value=11 Score=34.06 Aligned_cols=76 Identities=7% Similarity=0.107 Sum_probs=52.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCcee
Q 012024 341 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 420 (472)
Q Consensus 341 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~ 420 (472)
+.+.++.|+.|++.+++.+ -.|-|-+ -+-+ ...| +-||..-.+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-ViHsf~v-------P~lg-----------------~K~D---aiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VLHSWAV-------PSLG-----------------LKTD---AIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SCEEEEE-------GGGT-----------------EEEE---ECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeCc-ccceeee-------cccC-----------------cEEE---ecCCceEEEEEecCCcEE
Confidence 4467899999999999865 4555444 2221 1233 235666778899999999
Q ss_pred eEeeecchhHH-hcccEEEEEEecC
Q 012024 421 WNLRSESWARQ-YLGQQFYLRVYTA 444 (472)
Q Consensus 421 w~~HCHil~H~-d~GMm~~~~V~~~ 444 (472)
+...|.-+-.. |.-|-..++|..+
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPL 216 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECH
T ss_pred EEEEehhhcccccccCeEEEEEEcH
Confidence 99999865544 4566677777654
No 145
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=57.79 E-value=13 Score=30.13 Aligned_cols=60 Identities=17% Similarity=0.146 Sum_probs=43.4
Q ss_pred CcccccccCCeeEeccCCCC--------C-CC--CCCCCCCccCCC----CCCCCeEEEEEEeCC--ceeeeEEecc
Q 012024 1 MSLTATSIRSAFANGNGIQN--------R-RN--SFEDGVYGTTCP----IPPGKNFTYILQVKD--QIGSFYYFPS 60 (472)
Q Consensus 1 ~~~~n~l~~~tsiHwHG~~~--------~-~~--~~~DGv~~tq~~----i~pG~~~~Y~~~~~~--~~Gt~wYH~H 60 (472)
|.++|....+.++.+.--.. . .. -|+||-..+|.. |+||++.+|+...++ .+|+|..+.=
T Consensus 24 ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 24 MSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 45788888888888764422 0 11 247887766633 999999999999973 4899988764
No 146
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=43.64 E-value=14 Score=35.31 Aligned_cols=72 Identities=8% Similarity=0.149 Sum_probs=49.9
Q ss_pred EeecCCcEEEEEEEcCCCCCCCeeecCCceEEEEeecCCCCCCCCCCCCcCCCCccceEEeCCCCEEEEEEEecCceeeE
Q 012024 343 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 422 (472)
Q Consensus 343 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 422 (472)
+.++.|+.|++.+++.+ -.|-|.+ -+-+ ...| +-||-...+.|.++.||.|.
T Consensus 153 l~lP~g~~V~~~lTS~D-ViHsf~I-------P~lg-----------------~k~D---aiPGr~n~~~~~~~~~G~y~ 204 (315)
T 1fft_B 153 IAFPANTPVYFKVTSNS-VMNSFFI-------PRLG-----------------SQIY---AMAGMQTRLHLIANEPGTYD 204 (315)
T ss_dssp CCCCSSSEEEEEECBSS-SCEEEEE-------GGGT-----------------EEEE---ECBTSCEEEEEECCSCBCCE
T ss_pred EEEeCCCEEEEEEEeCC-ccceeee-------cccC-----------------cEEe---ecCCcceeeEEecCCCeEEE
Confidence 56799999999999865 4455444 2221 1123 33567778899999999999
Q ss_pred eeecchhHH-hcccEEEEEEe
Q 012024 423 LRSESWARQ-YLGQQFYLRVY 442 (472)
Q Consensus 423 ~HCHil~H~-d~GMm~~~~V~ 442 (472)
..|--+-.. |..|-..++|.
T Consensus 205 g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 205 GISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp EBCCSCCSTTTTTCCEECCBC
T ss_pred EeccccchhhHHhccceEEEe
Confidence 999865544 45666777666
No 147
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=41.62 E-value=1.2e+02 Score=26.78 Aligned_cols=61 Identities=8% Similarity=0.102 Sum_probs=42.9
Q ss_pred eEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeeec
Q 012024 133 AFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFT 212 (472)
Q Consensus 133 ~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~~ 212 (472)
.+.+..|+.+||+|-+... .+.|.|....+. +..-||..-.+-+.++ .+|.|+.+.+...+
T Consensus 42 ~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgvK----------------~daiPGr~n~l~~~~~-~pG~y~g~CsE~CG 102 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV--MHSFFIPRLGSQ----------------IYAMAGMQTRLHLIAN-EPGTYDGICAEICG 102 (205)
T ss_dssp EEEEETTSCEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEECCS-SSEEEEEEECSCCS
T ss_pred eEEEeCCCEEEEEEecCCc--eeeEEecccCcE----------------EEecCCceEEEEEEeC-CCeEEEEEcccccc
Confidence 7889999999999987654 455555544322 3445677777777777 58999998875443
No 148
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=35.58 E-value=17 Score=29.70 Aligned_cols=29 Identities=31% Similarity=0.517 Sum_probs=20.1
Q ss_pred CCCCCccCCCCCCCCeEEEEEEeC--Cceee
Q 012024 26 EDGVYGTTCPIPPGKNFTYILQVK--DQIGS 54 (472)
Q Consensus 26 ~DGv~~tq~~i~pG~~~~Y~~~~~--~~~Gt 54 (472)
-+||-|-|.-|.||++|+|.=-.. .+.|+
T Consensus 66 G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~ 96 (127)
T 2f1e_A 66 GEGVVGEQPWLRPGEAFHYTSGVLLETEQGQ 96 (127)
T ss_dssp ESSBTTBCCEECTTCEEEEEEEEEESSSCEE
T ss_pred CCCeecCCCcCCCCCceEEeCCcCcCCCcEE
Confidence 367777777899999888864332 34554
No 149
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=31.42 E-value=27 Score=28.39 Aligned_cols=24 Identities=13% Similarity=0.307 Sum_probs=18.6
Q ss_pred CCCCCccCCCCCCCCeEEEEEEeC
Q 012024 26 EDGVYGTTCPIPPGKNFTYILQVK 49 (472)
Q Consensus 26 ~DGv~~tq~~i~pG~~~~Y~~~~~ 49 (472)
.|+=-++.|||.+|+.++|.+.++
T Consensus 70 ~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 70 TNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp CBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCccCCccCcccCCEEEEEEEEeE
Confidence 444434789999999999997774
No 150
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=30.15 E-value=60 Score=25.22 Aligned_cols=32 Identities=25% Similarity=0.515 Sum_probs=21.0
Q ss_pred eEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeC
Q 012024 122 GILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQN 161 (472)
Q Consensus 122 ~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~ 161 (472)
++.+||+ |+..+++++.||+ |......|.+++
T Consensus 6 s~~~~~~---p~v~l~~~~~~rI-----GR~~~~~l~Ldd 37 (102)
T 3uv0_A 6 SLFFGGL---PAILLKADTIYRI-----GRQKGLEISIAD 37 (102)
T ss_dssp EEEETTS---CCEECCTTCCEEE-----ESSTTSTEECCC
T ss_pred EEEECCc---ccEEeecCcEEEE-----cCCCCCcEEECC
Confidence 6788988 5788899887765 222344555544
No 151
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=29.67 E-value=15 Score=29.99 Aligned_cols=30 Identities=20% Similarity=0.094 Sum_probs=21.8
Q ss_pred eEEECCCCCCceEEEeCCcEEEEEEEEccCCC
Q 012024 122 GILINGRGSGAAFNVEQGKTYRLRISNVGLQN 153 (472)
Q Consensus 122 ~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~ 153 (472)
.+.|.=. .-.++|++||++||.+.|-+..+
T Consensus 63 TI~V~m~--~k~InV~~GETVrF~v~nkt~~W 92 (131)
T 2wtp_A 63 IIDVKPG--MRYVNVDSGETVAFRAGEKIVAW 92 (131)
T ss_dssp EEECCTT--CCEEEEETTCEEEEEETTEEEEE
T ss_pred EEEEccC--CeEEEecCCCEEEEEeCCcEEEE
Confidence 4444432 34699999999999998886543
No 152
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=28.34 E-value=33 Score=27.90 Aligned_cols=24 Identities=33% Similarity=0.794 Sum_probs=19.2
Q ss_pred CCCCC-ccCCCCCCCCeEEEEEEeC
Q 012024 26 EDGVY-GTTCPIPPGKNFTYILQVK 49 (472)
Q Consensus 26 ~DGv~-~tq~~i~pG~~~~Y~~~~~ 49 (472)
.|+=. ++.|||.+|+.++|.+.++
T Consensus 71 ~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 71 SDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp CBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCcccCCCcCcccCCcEEEEEEEeE
Confidence 45553 3689999999999998875
No 153
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=27.80 E-value=44 Score=27.64 Aligned_cols=29 Identities=31% Similarity=0.536 Sum_probs=20.5
Q ss_pred CCCCCccCCCCCCCCeEEEEEEe--CCceee
Q 012024 26 EDGVYGTTCPIPPGKNFTYILQV--KDQIGS 54 (472)
Q Consensus 26 ~DGv~~tq~~i~pG~~~~Y~~~~--~~~~Gt 54 (472)
-+||-|-|.-|.||++|+|.=-. ..+.|+
T Consensus 70 G~GVVGeqPvL~PGe~F~YtSg~~L~Tp~G~ 100 (139)
T 1xq4_A 70 GLGVVGQQPLLAPGETFEYTSGCPLPTPIGT 100 (139)
T ss_dssp EESSSSCCCEECTTCEEEEEEEEEESSSEEE
T ss_pred CCCeecCCCcCCCCCceEEcCCcCcCCCceE
Confidence 36777777789999988887443 245665
No 154
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=26.06 E-value=56 Score=26.00 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=27.6
Q ss_pred EEEecCceeeEeeecchhHHhcccEEEE-EEecCC
Q 012024 412 YIALDNVGMWNLRSESWARQYLGQQFYL-RVYTAS 445 (472)
Q Consensus 412 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~~~ 445 (472)
++..+.+|..-|=|=...|-..||-+.+ .|..+.
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4556889999999999999999999999 776543
No 155
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=25.77 E-value=49 Score=26.88 Aligned_cols=29 Identities=28% Similarity=0.464 Sum_probs=20.4
Q ss_pred CCCCCccCCCCCCCCeEEEEEEe--CCceee
Q 012024 26 EDGVYGTTCPIPPGKNFTYILQV--KDQIGS 54 (472)
Q Consensus 26 ~DGv~~tq~~i~pG~~~~Y~~~~--~~~~Gt 54 (472)
-+||-|-|.-|.||++|+|.=-. ..+.|+
T Consensus 65 G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~ 95 (126)
T 1xvs_A 65 GDGVVGEQPRIKANDEYTYSSGTALDTPVGV 95 (126)
T ss_dssp EESBTTBCCEECTTCEEEEEEEEEESSSEEE
T ss_pred CCceEcCCCcCCCCCceEEeCCcCcCCCcEE
Confidence 36777777789999988887443 245565
No 156
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=24.43 E-value=43 Score=27.49 Aligned_cols=29 Identities=31% Similarity=0.558 Sum_probs=20.6
Q ss_pred CCCCCccCCCCCCCCeEEEEEEe--CCceee
Q 012024 26 EDGVYGTTCPIPPGKNFTYILQV--KDQIGS 54 (472)
Q Consensus 26 ~DGv~~tq~~i~pG~~~~Y~~~~--~~~~Gt 54 (472)
-+||-|-|.-|.||++|+|.=-. ..+.|+
T Consensus 65 G~GVVGeqP~L~PGe~F~YtSg~~L~Tp~G~ 95 (134)
T 1tza_A 65 GAGVVGETPTIPPNTAYQYTSGTVLDTPFGI 95 (134)
T ss_dssp EESBTTBCCEECTTEEEEEEEEEEESSSEEE
T ss_pred cCceEcCCCcCCCCCceEEcCCcCcCCCceE
Confidence 36777777789999988887443 245665
No 157
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=24.26 E-value=85 Score=24.95 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=27.8
Q ss_pred EEEEeCCceeeeEEecccchhhhcCceeEE-EEeCCC
Q 012024 44 YILQVKDQIGSFYYFPSLAFHKAAGGFGGI-RILSRP 79 (472)
Q Consensus 44 Y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 79 (472)
..+.+ +.+|++||=|=...+=..||...| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 45677 579999999988777788999999 887653
No 158
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=23.27 E-value=35 Score=28.77 Aligned_cols=26 Identities=4% Similarity=0.047 Sum_probs=20.8
Q ss_pred cCCcEEEEEEEcCCCCCCCeeecCCc
Q 012024 346 DYRAFIEIVFQNDEDIIQSYHLNGYQ 371 (472)
Q Consensus 346 ~~g~~ve~vi~N~~~~~HP~HlHG~~ 371 (472)
+.|..|.+.|.+.....|-||+|-.-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 2aqm_A 28 PGGLHFKVNMEKLTPGYHGFHVHENP 53 (154)
T ss_dssp TTSEEEEEEECSCCSEEECEEEESSS
T ss_pred CCCEEEEEEEECCCCCcceEEEccCC
Confidence 44677888888888788999999654
No 159
>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*
Probab=22.70 E-value=35 Score=28.84 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=20.8
Q ss_pred cCCcEEEEEEEcCCCCCCCeeecCCc
Q 012024 346 DYRAFIEIVFQNDEDIIQSYHLNGYQ 371 (472)
Q Consensus 346 ~~g~~ve~vi~N~~~~~HP~HlHG~~ 371 (472)
+.|..|++.|.+.....|-||+|-.-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (156)
T 1eqw_A 28 PYGLLFTPHLNGLTPGIHGFHVHTNP 53 (156)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCcEEEEEEEeCCCCCceeEEECCCC
Confidence 45677888888888788999999654
No 160
>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A
Probab=22.43 E-value=36 Score=28.71 Aligned_cols=26 Identities=8% Similarity=-0.035 Sum_probs=20.7
Q ss_pred cCCcEEEEEEEcCCCCCCCeeecCCc
Q 012024 346 DYRAFIEIVFQNDEDIIQSYHLNGYQ 371 (472)
Q Consensus 346 ~~g~~ve~vi~N~~~~~HP~HlHG~~ 371 (472)
+.|..|.+.|.+.....|-||+|-.-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 1eso_A 28 DKGLEFSPDLKALPPGEHGFHIHAKG 53 (154)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCCEEEEEEEECCCCCcccEEEcCCC
Confidence 45677888888888788999999654
No 161
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=22.02 E-value=37 Score=28.52 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=21.0
Q ss_pred cCCcEEEEEEEcCCCCCCCeeecCCc
Q 012024 346 DYRAFIEIVFQNDEDIIQSYHLNGYQ 371 (472)
Q Consensus 346 ~~g~~ve~vi~N~~~~~HP~HlHG~~ 371 (472)
+.|..|.+.|.+.....|-||+|-.-
T Consensus 25 ~~gv~v~~~l~GL~pG~hGfHIHe~G 50 (151)
T 1oal_A 25 KYGVVFIPELADLTPGEHGFHIHQNG 50 (151)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCcEEEEEEEECCCCCcceEEEccCC
Confidence 45678888888888788999999654
No 162
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=21.54 E-value=3.2e+02 Score=24.93 Aligned_cols=61 Identities=15% Similarity=0.173 Sum_probs=42.0
Q ss_pred ceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeee
Q 012024 132 AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRF 211 (472)
Q Consensus 132 ~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~ 211 (472)
..+.++.|+.+||++-+... .+.|.+.+..++ +..-||..-.+-+.++ .+|.|..+.+..+
T Consensus 171 n~l~lP~g~~v~~~~tS~DV--iHsf~ip~l~~k----------------~da~PG~~n~~~~~~~-~~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV--IHSWTVPAFGVK----------------QDAVPGRLAQLWFRAE-REGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS--CEEEEEGGGTEE----------------EEECBTCCEEEEEECC-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECcc--cceeeecccCce----------------EEecCCceeEEEEecC-CcEEEEEEChHhc
Confidence 36899999999999986644 455655544332 2344677777777777 5799998776543
No 163
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=20.80 E-value=1.1e+02 Score=25.03 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=28.9
Q ss_pred EEEe-cCceeeEeeecchhHHhcccEEEEEEecCC
Q 012024 412 YIAL-DNVGMWNLRSESWARQYLGQQFYLRVYTAS 445 (472)
Q Consensus 412 rf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 445 (472)
+|.. +.+|.+-|=|=...|-..||-+.+.|....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 3455 789999999999999999999999997654
No 164
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=20.75 E-value=84 Score=24.64 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=28.0
Q ss_pred EEEecCceeeEeeecchhHHhcccEEEEEEecC
Q 012024 412 YIALDNVGMWNLRSESWARQYLGQQFYLRVYTA 444 (472)
Q Consensus 412 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 444 (472)
+|..+.+|..-|=|=...|-..||-+.+.|...
T Consensus 73 ~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 73 SIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEECCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 456688999999999999999999999988644
No 165
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=20.67 E-value=3.8e+02 Score=25.00 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=42.3
Q ss_pred ceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceeeeEEEEcCCCeEEEEEEeCCCCCceEEEEeeee
Q 012024 132 AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRF 211 (472)
Q Consensus 132 ~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~~~l~l~~G~R~dv~v~~~~~~g~y~i~~~~~~ 211 (472)
..+.+..|+.+||++-+... .+.|.|....++ +..-||..-.+-+.++ .+|.|..+.+..+
T Consensus 189 N~lvlP~g~~V~~~ltS~DV--iHsf~iP~lg~k----------------~daiPG~~n~~~~~~~-~~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDV--IHAWTIPAFAVK----------------QDAVPGRIAQLWFSVD-QEGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEEECS-SSEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCCc--cceeeEcccCce----------------EEecCCceEEEEEEeC-CCEEEEEEccccc
Confidence 36888999999998887654 455555443322 3345777777788887 5899998876543
No 166
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=20.26 E-value=2.2e+02 Score=24.24 Aligned_cols=85 Identities=9% Similarity=-0.028 Sum_probs=47.4
Q ss_pred CeEEECCCCCCceEEEeCCcEEEEEEEEccCCCcEeEEEeCceeEEEEeCCccccceee----eEE--E-EcCCCeEEEE
Q 012024 121 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTY----SSL--D-VHVGQSYSVL 193 (472)
Q Consensus 121 d~~liNG~~~~~~~~v~~g~~~rlR~in~~~~~~~~~~i~~h~~~via~DG~~~~p~~~----~~l--~-l~~G~R~dv~ 193 (472)
+..+.|..+. +.-.+..|+.+++|+-=-.....-.+.+ -|.|.-.+|..+--..+ ..+ . +.+|+.+.+.
T Consensus 52 ~v~l~d~~G~-~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~ 127 (188)
T 2r5o_A 52 DYHIQSAGVD-FPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFK 127 (188)
T ss_dssp EEEEEETTEE-SCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEE
T ss_pred EEEEEECCCC-EeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEE
Confidence 3455555542 4555789999888866544432222221 24555556666521110 112 3 5789976665
Q ss_pred EEeCC--CCCceEEEEee
Q 012024 194 VTADQ--PARDYYIVVSS 209 (472)
Q Consensus 194 v~~~~--~~g~y~i~~~~ 209 (472)
+.++- .+|+|.|.+..
T Consensus 128 f~f~l~L~~G~Y~lsv~i 145 (188)
T 2r5o_A 128 FSLPVDLNSGDYLLSFGI 145 (188)
T ss_dssp EEEECCBCSEEEEEEEEE
T ss_pred EEEecccCCCeEEEEEEE
Confidence 55442 57999998754
No 167
>2aqp_A Superoxide dismutase [CU-ZN]; electrostatic guidance, neisseria MENI oxidoreductase; 1.30A {Neisseria meningitidis} PDB: 2aqn_A 2aqr_A 2aqq_A 2aqt_C 2aqs_A 2aps_A 1z9p_A
Probab=20.08 E-value=42 Score=28.57 Aligned_cols=26 Identities=12% Similarity=0.218 Sum_probs=20.9
Q ss_pred cCCcEEEEEEEcCCCCCCCeeecCCc
Q 012024 346 DYRAFIEIVFQNDEDIIQSYHLNGYQ 371 (472)
Q Consensus 346 ~~g~~ve~vi~N~~~~~HP~HlHG~~ 371 (472)
+.|..|.+.|..+....|-||+|-.-
T Consensus 37 ~~gv~v~~~l~GL~pG~HGfHIHe~G 62 (164)
T 2aqp_A 37 NYGLVFTPDLQGLSAGLHGFHIHENP 62 (164)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCcEEEEEEEeCCCCCceeEEEecCC
Confidence 45678888888888788999999654
Done!