BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 012027
         (472 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224127726|ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1203

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 195/499 (39%), Positives = 273/499 (54%), Gaps = 61/499 (12%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            +CLR+L LD+T I+E+P SI+ L GL+ L+LK CK L  LPS+IN LKSLKTL+L GC +
Sbjct: 737  KCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSE 796

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY---LP 118
             ENL E  GQ+E L ELD+SGTAIR PP SIF +KNLK LSF GC     S +     L 
Sbjct: 797  LENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLM 856

Query: 119  FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            FP+   +R++    ++  SLSGL SLT+L LS+C LGEGA+P+DIG L SL+ L LS+N 
Sbjct: 857  FPLMPGKRANSTSLVLP-SLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNK 915

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            FV+LP SI+ L  L+ L++EDCK LQSLP+LP N+E+ RVNGC SL  +  + KL + + 
Sbjct: 916  FVSLPTSIDQLSGLQFLRMEDCKMLQSLPELPSNLEEFRVNGCTSLEKMQFSRKLCQLNY 975

Query: 239  TIIDFVDSLKLLGK---NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSS 295
                F++  +L      N +  ++LR+  +        FS+++PGSEIP WF +Q+EGSS
Sbjct: 976  LRYLFINCWRLSESDCWNNMFPTLLRKCFQGPPNLIESFSVIIPGSEIPTWFSHQSEGSS 1035

Query: 296  ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRR----------------FYRYPHPAH 339
            ++V  P +    ++ +GYA C     P     + R                 Y    P  
Sbjct: 1036 VSVQTPPHSHENDEWLGYAVCASLGYPDFPPNVFRSPMQCFFNGDGNESESIYVRLKPCE 1095

Query: 340  VLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTG 399
            +L            SDHLW LY P        ++     H R  F D    +C     + 
Sbjct: 1096 IL------------SDHLWFLYFPS-------RFKRFDRHVRFRFED----NC-----SQ 1127

Query: 400  LKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDF-------VGSNMAVAKANG 452
             KV +CG    Y  +VEE +  T  +   T   ++E   +        +G    V +A+G
Sbjct: 1128 TKVIKCGVRLVYQQDVEELNRMTNLYENSTFEGVDECFQESGGALVKRLGHTNDVGEASG 1187

Query: 453  SGCCDDYDEEPQPNRFRQL 471
            S      DE+P   + +Q+
Sbjct: 1188 SVSS---DEQPPTKKLKQI 1203



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 21/163 (12%)

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY----LPFPINLMRRS 127
           ++SL+ +D+S +       +   + NL+ L  +GC       S          +NLM   
Sbjct: 641 LDSLKVIDLSYSEYLIKTPNFTGIPNLERLILQGCRRLSEVHSSIGHHNKLIYVNLM--- 697

Query: 128 SDLGALM-LPS-LSGLGSLTKLDLSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
            D  +L  LPS +SGL  L +L LS C  L E   P   GN   L+ L L + +   LP 
Sbjct: 698 -DCESLTSLPSRISGLNLLEELHLSGCSKLKE--FPEIEGNKKCLRKLCLDQTSIEELPP 754

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           SI  L  L  L L+DCK+L  LP          +NG  SL TL
Sbjct: 755 SIQYLVGLISLSLKDCKKLSCLPS--------SINGLKSLKTL 789


>gi|224146780|ref|XP_002336335.1| predicted protein [Populus trichocarpa]
 gi|222834747|gb|EEE73210.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 272/498 (54%), Gaps = 49/498 (9%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           +CLR+L LD+T I+E+P SI+ L GL+ L+LK CK L  LPS+IN LKSLKTL+L GC +
Sbjct: 64  KCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSE 123

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY---LP 118
            ENL E  GQ+E L ELD+SGTAIR PP SIF +KNLK LSF GC     S +     L 
Sbjct: 124 LENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLM 183

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
           FP+   +R++    ++  SLSGL SLT+L LS+C LGEGA+P+DIG L SL+ L LS+N 
Sbjct: 184 FPLMPGKRANSTSLVLP-SLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNK 242

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
           FV+LP SI+ L  L+ L +EDCK LQSLPQLPPN+E +RVNGC SL  +  +    K +C
Sbjct: 243 FVSLPTSIDQLSGLKFLYMEDCKMLQSLPQLPPNLELLRVNGCTSLEKMQFSSNPYKFNC 302

Query: 239 TIIDFVDSLKLLGK---NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSS 295
               F++  +L      N +  ++LR+  +        FS+ +PGSEIP WF +Q+EGSS
Sbjct: 303 LSFCFINCWRLSESDCWNNMFHTLLRKCFQGPPNLIEVFSVFIPGSEIPTWFSHQSEGSS 362

Query: 296 ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTG--IRRFYRYPHPAHVLHCSMDE----KF 349
           ++V  P +    ++ +GYA C        ++   +  ++    P       ++      +
Sbjct: 363 VSVQTPPHSLENDECLGYAVCASLEYDGCASSELLTDYWVSGVPISCFFNGVNYGSVMSY 422

Query: 350 GHRG-----------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGT 398
            HRG           SDHLW L+ P        ++     H  L F   R +        
Sbjct: 423 FHRGIEMQWKRDNIPSDHLWYLFFPS-------RFKIFDRHVSLRFETYRPQ-------- 467

Query: 399 GLKVKRCGFHPGYMHEVEE-----FDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGS 453
            +KV +CG  P Y  +VE       DE  ++    T             +N  V +A+GS
Sbjct: 468 -IKVIKCGVRPVYHQDVENSTFEGVDECFQESGGSTMRGGGALVKRLCYTN-DVGEASGS 525

Query: 454 GCCDDYDEEPQPNRFRQL 471
                 DE+P   + +Q+
Sbjct: 526 ---VSSDEQPPTKKLKQI 540



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 82/187 (43%), Gaps = 23/187 (12%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           + E+  SI   + L+ + L  C++L  LPS I+ L  L+ L+L GC K +   E  G  +
Sbjct: 5   LSEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKK 64

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L +L +  T+I   P SI  +  L +LS + C       SC LP  IN           
Sbjct: 65  CLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCK----KLSC-LPSSIN----------- 108

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
                 GL SL  L LS C   E  +P + G L  L  L +S       P SI  L NL+
Sbjct: 109 ------GLKSLKTLHLSGCSELEN-LPENFGQLECLNELDVSGTAIREPPVSIFSLKNLK 161

Query: 194 KLKLEDC 200
            L    C
Sbjct: 162 ILSFHGC 168



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 135 LPS-LSGLGSLTKLDLSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
           LPS +SGL  L +L LS C  L E   P   GN   L+ L L + +   LP SI  L  L
Sbjct: 32  LPSRISGLNLLEELHLSGCSKLKE--FPEIEGNKKCLRKLCLDQTSIEELPPSIQYLVGL 89

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
             L L+DCK+L  LP          +NG  SL TL
Sbjct: 90  ISLSLKDCKKLSCLPS--------SINGLKSLKTL 116


>gi|224114331|ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832723|gb|EEE71200.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1119

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 177/416 (42%), Positives = 234/416 (56%), Gaps = 47/416 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD T I+E+  SI  L GL  L++K CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 560 MNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCS 619

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +FEN+ E +G+VESLEE D+SGT+IR PP+SIFL+KNLK LSF GC              
Sbjct: 620 EFENIPENLGKVESLEEFDVSGTSIRQPPASIFLLKNLKVLSFDGCK------------- 666

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
               R +  L    LPSLSGL SL  LDL  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 667 ----RIAESLTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFV 722

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN L  LE L LEDC  L+SLP++P  V+ + +NGC  L  +    +L  S  + 
Sbjct: 723 SLPRSINQLSGLEMLALEDCTMLESLPEVPSKVQTLNLNGCIRLKEIPDPTELSSSKRSE 782

Query: 241 IDFVDSLKLLGKNG---LAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              ++  +L   NG   + ++ML  +LE +S P   F I +PG+EIP WF +Q+ GSSI+
Sbjct: 783 FICLNCWELYNHNGEDSMGLTMLERYLEGLSNPRPGFGIAIPGNEIPGWFNHQSMGSSIS 842

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGH 351
           V  PS+       +G+ AC  F     S  +   ++      YP P   + C+  +    
Sbjct: 843 VQVPSW------SMGFVACVAFSANGESPSLFCHFKANGRENYPSPM-CISCNYIQVL-- 893

Query: 352 RGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
             SDH+WL YL         +W  ES ++  LSF   +          G+KVK CG
Sbjct: 894 --SDHIWLFYLSFDHLKELKEWKHESYSNIELSFHSFQ---------PGVKVKNCG 938


>gi|359496026|ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 181/444 (40%), Positives = 246/444 (55%), Gaps = 41/444 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LREL LD T IKE+PLS+E L+GLV L L+ C+ L+ LPS+I +LKSL TL L GC 
Sbjct: 743  MEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCS 802

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + E L E +G +E L EL   G+A+  PPSSI L++NLK LSF+GCNG PSS      + 
Sbjct: 803  QLEKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWS 862

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN-LHSLKTLYLSKNNF 179
            +  +RR SD     LPSLSGL SL +L+LSDC + EGA+P+D+G  L SL+ L L  N+F
Sbjct: 863  MLCLRRISDSTGFRLPSLSGLCSLKQLNLSDCNIKEGALPNDLGGYLSSLEYLNLKGNDF 922

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
            VTLP  I+ L NL+ L L  CKRLQ LP LPPN+ ++    C SL TL G      S+  
Sbjct: 923  VTLPTGISKLCNLKALYLGCCKRLQELPMLPPNINRINAQNCTSLETLSGL-----SAPC 977

Query: 240  IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
             + F +S +   +N    + L    EV   P  KF+  +PG+ IP+WF  Q  G SI V 
Sbjct: 978  WLAFTNSFR---QNWGQETYLA---EVSRIP--KFNTYLPGNGIPEWFRNQCMGDSIMVQ 1029

Query: 300  RPSYLCNMNQVVGYAACRVFHVPKHSTGIR-----RFYRYPHPAHVLHCSMD-------- 346
             PS+  N N  +G+A C VF + + +   R                L C +D        
Sbjct: 1030 LPSHWYNDN-FLGFAMCIVFALKEPNQCSRGAMLCELESSDLDPSNLGCFLDHIVWEGHS 1088

Query: 347  EKFGHRGSDHLWLLYLPRQSYYC-NVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRC 405
            +  G   SDHLWL Y P       ++ W  + +H + SF+          +G   +VK C
Sbjct: 1089 DGDGFVESDHLWLGYHPNFPIKKDDMDWPNKLSHIKASFV---------IAGIPHEVKWC 1139

Query: 406  GFHPGYMHEVEEFDETTKQWTRFT 429
            GF   YM   E+ ++   + T+++
Sbjct: 1140 GFRLVYM---EDLNDDNSKITKYS 1160



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 11/196 (5%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA--IRCPPSSIFLM 95
           L  LPSN +  K+L  LNL  C+  E L + V  +E LE +D+S +   +R P  S   +
Sbjct: 617 LKSLPSNFHP-KNLVELNLCCCY-VEELWKGVKHMEKLECIDLSHSQYLVRTPDFSG--I 672

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM-LPSLSGLGSLTKLDLSDCGL 154
            NL+ L F GC                +     D   L   PS   L SL  L LS C  
Sbjct: 673 PNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIELESLKVLILSGCSK 732

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
            +   P  + N+  L+ L+L       LP S+  L  L  L L +C+RL +LP    N++
Sbjct: 733 LDN-FPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLK 791

Query: 215 KVR---VNGCASLVTL 227
            +    ++GC+ L  L
Sbjct: 792 SLSTLTLSGCSQLEKL 807


>gi|296090591|emb|CBI40960.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 179/444 (40%), Positives = 245/444 (55%), Gaps = 41/444 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME LREL LD T IKE+PLS+E L+GLV L L+ C+ L+ LPS+I +LKSL TL L GC 
Sbjct: 249 MEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCS 308

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + E L E +G +E L EL   G+A+  PPSSI L++NLK LSF+GCNG PSS      + 
Sbjct: 309 QLEKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWS 368

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN-LHSLKTLYLSKNNF 179
           +  +RR SD     LPSLSGL SL +L+LSDC + EGA+P+D+G  L SL+ L L  N+F
Sbjct: 369 MLCLRRISDSTGFRLPSLSGLCSLKQLNLSDCNIKEGALPNDLGGYLSSLEYLNLKGNDF 428

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
           VTLP  I+ L NL+ L L  CKRLQ LP LPPN+ ++    C SL TL G      S+  
Sbjct: 429 VTLPTGISKLCNLKALYLGCCKRLQELPMLPPNINRINAQNCTSLETLSGL-----SAPC 483

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
            + F +S +   +N    + L E   +      KF+  +PG+ IP+WF  Q  G SI V 
Sbjct: 484 WLAFTNSFR---QNWGQETYLAEVSRI-----PKFNTYLPGNGIPEWFRNQCMGDSIMVQ 535

Query: 300 RPSYLCNMNQVVGYAACRVFHVPKHSTGIR-----RFYRYPHPAHVLHCSMD-------- 346
            PS+  N N  +G+A C VF + + +   R                L C +D        
Sbjct: 536 LPSHWYNDN-FLGFAMCIVFALKEPNQCSRGAMLCELESSDLDPSNLGCFLDHIVWEGHS 594

Query: 347 EKFGHRGSDHLWLLYLPRQSYYC-NVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRC 405
           +  G   SDHLWL Y P       ++ W  + +H + SF+          +G   +VK C
Sbjct: 595 DGDGFVESDHLWLGYHPNFPIKKDDMDWPNKLSHIKASFVI---------AGIPHEVKWC 645

Query: 406 GFHPGYMHEVEEFDETTKQWTRFT 429
           GF   YM   E+ ++   + T+++
Sbjct: 646 GFRLVYM---EDLNDDNSKITKYS 666



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 15/248 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           TD++E+  S+ +LS L+ L LK CKNL   PS+I  L+SLK L L GC K +   E +G 
Sbjct: 119 TDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSI-ELESLKVLILSGCSKLDKFPEILGY 177

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           + +L EL ++GTAI   PSSI     L +L    C    S   C   + +  ++     G
Sbjct: 178 LPNLLELHLNGTAITELPSSIGYATQLVSLDMEDCKRFKSLPCCI--YKLKSLKILKLSG 235

Query: 132 ALMLPS----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
                S    L  +  L +L L    + E  +P  + +L+ L  L L      +TLP+SI
Sbjct: 236 CAKFESFPEILENMEGLRELFLDGTAIKE--LPLSVEHLNGLVLLNLRNCERLITLPSSI 293

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
             L +L  L L  C +L+ LP+   N+E +       LV    A+    SS  ++  +  
Sbjct: 294 CNLKSLSTLTLSGCSQLEKLPENLGNLECL-----VELVADGSAVIQPPSSIVLLRNLKV 348

Query: 247 LKLLGKNG 254
           L   G NG
Sbjct: 349 LSFQGCNG 356



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 94/198 (47%), Gaps = 25/198 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL L+ T I E+P SI   + LV L ++ CK    LP  I  LKSLK L L GC KFE
Sbjct: 181 LLELHLNGTAITELPSSIGYATQLVSLDMEDCKRFKSLPCCIYKLKSLKILKLSGCAKFE 240

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           +  E +  +E L EL + GTAI+  P S+  +  L  L+ R C                 
Sbjct: 241 SFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCE---------------- 284

Query: 124 MRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                    + LP S+  L SL+ L LS C   E  +P ++GNL  L  L    +  +  
Sbjct: 285 -------RLITLPSSICNLKSLSTLTLSGCSQLE-KLPENLGNLECLVELVADGSAVIQP 336

Query: 183 PASINCLFNLEKLKLEDC 200
           P+SI  L NL+ L  + C
Sbjct: 337 PSSIVLLRNLKVLSFQGC 354


>gi|224114311|ref|XP_002332395.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832718|gb|EEE71195.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1144

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 178/463 (38%), Positives = 253/463 (54%), Gaps = 59/463 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I+ LKSLK L+L GC 
Sbjct: 561 MNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCS 620

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + +N+ + +G+VESLEE D+SGT+IR PP+SIFL+K+LK LSF GC              
Sbjct: 621 ELKNIPKNLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDGCK------------- 667

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
               R + +     LPSLSGL SL  LDL  C L EGA+P DIG L SL++L LS+NNFV
Sbjct: 668 ----RIAVNPTDHRLPSLSGLCSLEVLDLCACNLREGALPEDIGFLSSLRSLDLSQNNFV 723

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN LF LE+L LEDC  L+SLP++P  V+ V +NGC SL  +   +KL  S  + 
Sbjct: 724 SLPQSINQLFELERLVLEDCSMLESLPEVPSKVQTVNLNGCISLKEIPDPIKLSSSKISE 783

Query: 241 IDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              ++  +L    G++ + ++ML  +L+ +S P   F IVVPG+EIP WF ++++GSSI+
Sbjct: 784 FLCLNCWELYEHNGQDSMGLTMLERYLKGLSNPRPGFGIVVPGNEIPGWFNHRSKGSSIS 843

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGH 351
           V  PS+       +G+ AC  F     S  +   ++      YP P   + C+  +    
Sbjct: 844 VQVPSW------SMGFVACVAFSANGESPSLFCHFKTNGRENYPSPM-CISCNSIQVL-- 894

Query: 352 RGSDHLWLLYLPRQSYYCNVKW-HFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF--- 407
             SDH+WL YL         +W H   ++  LSF   + +         +KVK CG    
Sbjct: 895 --SDHIWLFYLSFDYLIELKEWQHGSFSNIELSFHSSQPR---------VKVKNCGVCLL 943

Query: 408 -------HPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGS 443
                   P   H +    ET   +    S  L+  +H ++ S
Sbjct: 944 SSLYITSQPSSAHFIVTSKETASSYK--ASLTLSSSYHHWMAS 984


>gi|359493273|ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 177/491 (36%), Positives = 255/491 (51%), Gaps = 57/491 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L++LLLD T +K++  SIE L+GLV L L+ CKNL  LP +I +LKSL+TL + GC 
Sbjct: 726  MEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCS 785

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K + L E +G ++ L +L   GT +R PPSSI L++NL+ LSF GC G  S++   L   
Sbjct: 786  KLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSF 845

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              L R+SSD   L LPSLSGL SL +LD+SDC L EGA+P DI NL SL+TL LS+NNF 
Sbjct: 846  WLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNFF 905

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL--RKSSC 238
            +LPA I+ L  L  L L  CK L  +P+LP ++ +V    C+SL T+L    +   +  C
Sbjct: 906  SLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQPVC 965

Query: 239  TIIDFV--DSLKLLGKNGLA--ISMLREFLEVVS---------APSHKFSIVVPGSEIPK 285
              + F   +   L  +N  +  ++++   +++V+          P   FSI +PGSEIP 
Sbjct: 966  RWLVFTLPNCFNLDAENPCSNDMAIISPRMQIVTNMLQKLQNFLPDFGFSIFLPGSEIPD 1025

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP-------------KHSTGIRRFY 332
            W   QN GS +T+  P +    N  +G+A C VF                +  +    F 
Sbjct: 1026 WISNQNLGSEVTIELPPHWFESN-FLGFAVCCVFAFEDIAPNGCSSQLLCQLQSDESHFR 1084

Query: 333  RYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMD--EREK 390
               H  H + C  + +     S H+WL Y PR                R+S+ D   R +
Sbjct: 1085 GIGHILHSIDCEGNSE-DRLKSHHMWLAYKPR-------------GRLRISYGDCPNRWR 1130

Query: 391  HCPAGSG-----TGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNM 445
            H  A  G         V++CG H  Y  + EE + T    +   +++      D   ++ 
Sbjct: 1131 HAKASFGFISCCPSNMVRKCGIHLIYAQDHEERNSTMIHHSSSGNFS------DLKSADS 1184

Query: 446  AVAKANGSGCC 456
            +V  A+GSG C
Sbjct: 1185 SVG-ASGSGLC 1194



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 100/206 (48%), Gaps = 24/206 (11%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M  L  L+L+  T I E+P SI  L+GL+ L L+ CK L  LPS+I  LKSL+TL L  C
Sbjct: 654 MPNLERLVLEGCTTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSAC 713

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K E+  E +  +E L++L + GTA++    SI  +  L +L+ R C             
Sbjct: 714 SKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCK------------ 761

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             NL        A +  S+  L SL  L +S C   +  +P ++G+L  L  L       
Sbjct: 762 --NL--------ATLPCSIGNLKSLETLIVSGCSKLQ-QLPENLGSLQCLVKLQADGTLV 810

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQS 205
              P+SI  L NLE L    CK L S
Sbjct: 811 RQPPSSIVLLRNLEILSFGGCKGLAS 836



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 53/237 (22%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  + ++E+    E+L  L  + L   ++L+ LP N +S+ +L+ L L GC  
Sbjct: 609 ENLIELNMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLP-NFSSMPNLERLVLEGCTT 667

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G +  L  LD+               K LK+L        PSS         
Sbjct: 668 ISELPFSIGYLTGLILLDLENC------------KRLKSL--------PSS--------- 698

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                           +  L SL  L LS C   E + P  + N+  LK L L       
Sbjct: 699 ----------------ICKLKSLETLILSACSKLE-SFPEIMENMEHLKKLLLDGTALKQ 741

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL---LGALK 232
           L  SI  L  L  L L DCK L +LP    N   +E + V+GC+ L  L   LG+L+
Sbjct: 742 LHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQ 798


>gi|224104273|ref|XP_002333965.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222839252|gb|EEE77603.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1033

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 172/416 (41%), Positives = 229/416 (55%), Gaps = 53/416 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL LD T ++E+  SI  L  L  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 475 MNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS 534

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + +NL     +VES EE D SGT+IR PP+ IFL+KNLK LSF GC              
Sbjct: 535 ELKNL----EKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCK------------- 577

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
               R +  L    LPSLSGL SL  LDL  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 578 ----RIAVSLTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFV 633

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP S+N L  LE L LEDC+ L+SLP++P  V+ V +NGC SL  +   +KL  S  + 
Sbjct: 634 SLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLKEIPDPIKLSSSKISE 693

Query: 241 IDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              ++  +L    G++ + ++ML  +L+ +S P   F I VPG+EIP WF +Q++GSSI+
Sbjct: 694 FLCLNCWELYEHNGQDSMGLTMLERYLQGLSNPRPGFGIAVPGNEIPGWFNHQSKGSSIS 753

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAH------VLHCSMDEKFGH 351
           V  PS+       +G+ AC  F     + G R F R    A+       L C    +   
Sbjct: 754 VQVPSW------SMGFVACVAF----SAYGERPFLRCDFKANGRENYPSLMCINSIQV-- 801

Query: 352 RGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
             SDH+WL YL         +W  ES ++  LSF     +         +KVK CG
Sbjct: 802 -LSDHIWLFYLSFDYLKELKEWQNESFSNIELSFHSYERR---------VKVKNCG 847


>gi|105922631|gb|ABF81427.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1336

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 172/416 (41%), Positives = 229/416 (55%), Gaps = 53/416 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL EL LD T ++E+  SI  L  L  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 647  MNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS 706

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + +NL     +VES EE D SGT+IR PP+ IFL+KNLK LSF GC              
Sbjct: 707  ELKNL----EKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCK------------- 749

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                R +  L    LPSLSGL SL  LDL  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 750  ----RIAVSLTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFV 805

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            +LP S+N L  LE L LEDC+ L+SLP++P  V+ V +NGC SL  +   +KL  S  + 
Sbjct: 806  SLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLKEIPDPIKLSSSKISE 865

Query: 241  IDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
               ++  +L    G++ + ++ML  +L+ +S P   F I VPG+EIP WF +Q++GSSI+
Sbjct: 866  FLCLNCWELYEHNGQDSMGLTMLERYLQGLSNPRPGFGIAVPGNEIPGWFNHQSKGSSIS 925

Query: 298  VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAH------VLHCSMDEKFGH 351
            V  PS+       +G+ AC  F     + G R F R    A+       L C    +   
Sbjct: 926  VQVPSW------SMGFVACVAF----SAYGERPFLRCDFKANGRENYPSLMCINSIQV-- 973

Query: 352  RGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
              SDH+WL YL         +W  ES ++  LSF     +         +KVK CG
Sbjct: 974  -LSDHIWLFYLSFDYLKELKEWQNESFSNIELSFHSYERR---------VKVKNCG 1019


>gi|224126507|ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1741

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/324 (46%), Positives = 209/324 (64%), Gaps = 23/324 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            + CLREL LD T I ++  S   L+GLV L++  CKNL  +PS+I  LKSLK L++  C 
Sbjct: 1199 INCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRLDVSDCS 1258

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + +N+ E +G+VESLEE D SGT+IR PP+S FL+KNLK LSF+GC              
Sbjct: 1259 ELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCK------------- 1305

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                R + +L   +LPSLSGL SL +LDL  C LGEGA+P DIG L SL++L LS+NNF+
Sbjct: 1306 ----RIAVNLTDQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFI 1361

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK---LRKSS 237
            +LP SIN L  LEKL L+DC  L+SLP++P  V+KV+++GC  L  +   +K   L++S 
Sbjct: 1362 SLPKSINQLSRLEKLALKDCVMLESLPEVPLKVQKVKLDGCLKLKEIPDPIKLCSLKRSE 1421

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
               ++  +     G+N + ++ML ++L+  S+P   F I VPG+EIP WF +Q++ SSI 
Sbjct: 1422 FKCLNCWELYMHNGQNNMGLNMLEKYLQ-GSSPRPGFGIAVPGNEIPGWFTHQSKESSIR 1480

Query: 298  VTRPS-YL-CNMNQVVGYAACRVF 319
            V  PS YL  + N  +G+AAC  F
Sbjct: 1481 VQMPSNYLDGDDNGWMGFAACAAF 1504


>gi|224120770|ref|XP_002330947.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222873141|gb|EEF10272.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1120

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 168/418 (40%), Positives = 231/418 (55%), Gaps = 56/418 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+CL  L LD T I ++  S+  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 560 MKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 619

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + + E +G+VESLEE D+SGT+IR  P+SIFL+KNLK LS  G               
Sbjct: 620 ELKYIPEKLGEVESLEEFDVSGTSIRQLPASIFLLKNLKVLSLDG--------------- 664

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
               +R      +M PSLSGL SL  L L  C L EGA+P DIG L SL++L LS+NNFV
Sbjct: 665 ---FKR-----IVMPPSLSGLCSLEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNFV 716

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN LF LE L LEDC  L+SLP++P  V+ V +NGC SL T+   + L  SS  I
Sbjct: 717 SLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQTVCLNGCISLKTIPDPINL--SSSKI 774

Query: 241 IDFV-----DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSS 295
            +FV     +     G++ + +++L  + + +S P   F I +PG+EIP WF +Q++GSS
Sbjct: 775 SEFVCLNCWELYNHYGQDSMGLTLLERYFQGLSNPRPGFGIAIPGNEIPGWFNHQSKGSS 834

Query: 296 ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKF 349
           I+V  PS+       +G+ AC  F V   S  +   ++      YP     + C+  +  
Sbjct: 835 ISVQVPSW------SMGFVACVAFGVNGESPSLFCHFKANGRENYPSSPMCISCNSIQVL 888

Query: 350 GHRGSDHLWLLYLPRQSYYCNVKW-HFESNHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
               SDH+WL YL         +W H   ++  LSF           S  G+KVK CG
Sbjct: 889 ----SDHIWLFYLSFDYLKELQEWQHGSFSNIELSF---------HSSQPGVKVKNCG 933


>gi|224116210|ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1017

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 168/416 (40%), Positives = 224/416 (53%), Gaps = 54/416 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD T I E+  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L  C 
Sbjct: 479 MNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLKSLKKLDLSCCS 538

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +N+ E +G+VESLEE D+SGT+IR  P+S+FL+KNLK LS  GC              
Sbjct: 539 ALKNIPENLGKVESLEEFDVSGTSIRQLPASVFLLKNLKVLSLDGCKR------------ 586

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                       ++LPSLS L SL  L L  C L EG +P DIG L SL++L LS+NNFV
Sbjct: 587 -----------IVVLPSLSRLCSLEVLGLRACNLREGELPEDIGYLSSLRSLDLSQNNFV 635

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP +IN L  LE L LEDC  L SLP++P  V+ V +NGC SL T+   +KL  S  + 
Sbjct: 636 SLPKAINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLKTIPDPIKLSSSKRSE 695

Query: 241 IDFVDSLKLLGKNG---LAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              ++  +L   NG   + ++ML  +L+  S P   F I VPG+EIP WF ++++GSSI+
Sbjct: 696 FLCLNCWELYNHNGQESMGLTMLERYLQGFSNPRPGFGIAVPGNEIPGWFNHRSKGSSIS 755

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGH 351
           V  PS        +G+ AC  F+    S  +   ++      YP P     C   E  GH
Sbjct: 756 VQVPS------GRMGFFACVAFNANDESPSLFCHFKANGRENYPSPM----CINFE--GH 803

Query: 352 RGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
             SDH+WL YL         +W  ES ++  LSF    +         G+KV  CG
Sbjct: 804 LFSDHIWLFYLSFDYLKELQEWQHESFSNIELSFHSYEQ---------GVKVNNCG 850


>gi|147802475|emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 162/427 (37%), Positives = 228/427 (53%), Gaps = 45/427 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L++LLLD T +K++  SIE L+GLV L L+ CKNL  LP +I +LKSL+TL + GC 
Sbjct: 694  MEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCS 753

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K + L E +G ++ L +L   GT +R PPSSI L++NL+ LSF GC G  S++   L   
Sbjct: 754  KLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSF 813

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              L R+SSD   L LPSLSGL SL +LD+SDC L EGA+P DI NL SL+TL LS+NNF 
Sbjct: 814  WLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNFF 873

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL--RKSSC 238
            +LPA I+ L  L  L L  CK L  +P+LP ++ +V    C+SL T+L    +   +  C
Sbjct: 874  SLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQPVC 933

Query: 239  TIIDFV--DSLKLLGKNGLA--ISMLREFLEVVS---------APSHKFSIVVPGSEIPK 285
              + F   +   L  +N  +  ++++   +++V+          P   FSI +PGSEIP 
Sbjct: 934  RWLVFTLPNCFNLDAENPCSNDMAIISPRMQIVTNMLQKLQNFLPDFGFSIFLPGSEIPD 993

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP-------------KHSTGIRRFY 332
            W   QN GS +T+  P +    N  +G+A C VF                +  +    F 
Sbjct: 994  WISNQNLGSEVTIELPPHWFESN-FLGFAVCCVFAFEDIAPNGCSSQLLCQLQSDESHFR 1052

Query: 333  RYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMD--EREK 390
               H  H + C  + +     S H+WL Y PR                R+S+ D   R +
Sbjct: 1053 GIGHILHSIDCEGNSE-DRLKSHHMWLAYKPR-------------GRLRISYGDCPNRWR 1098

Query: 391  HCPAGSG 397
            H  A  G
Sbjct: 1099 HAKASFG 1105



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 100/206 (48%), Gaps = 25/206 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L EL LD T I E+P SI  L+GL+ L L+ CK L  LPS+I  LKSL+TL L  C 
Sbjct: 623 MQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACS 682

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E+  E +  +E L++L + GTA++    SI  +  L +L+ R C    +         
Sbjct: 683 KLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLAT--------- 733

Query: 121 INLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                         LP S+  L SL  L +S C   +  +P ++G+L  L  L       
Sbjct: 734 --------------LPCSIGNLKSLETLIVSGCSKLQ-QLPENLGSLQCLVKLQADGTLV 778

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQS 205
              P+SI  L NLE L    CK L S
Sbjct: 779 RQPPSSIVLLRNLEILSFGGCKGLAS 804



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 107/239 (44%), Gaps = 31/239 (12%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M  L  L+L+  T   E+  SIE+L+ L+ L LK CK L   P +I  L+ LK L+L GC
Sbjct: 552 MPNLERLVLEGCTSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPRSIK-LECLKYLSLSGC 610

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
              +N  E  G ++ L EL + GTAI   P SI  +  L  L    C    S  S     
Sbjct: 611 SDLKNFPEIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPS----- 665

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                            S+  L SL  L LS C   E + P  + N+  LK L L     
Sbjct: 666 -----------------SICKLKSLETLILSACSKLE-SFPEIMENMEHLKKLLLDGTAL 707

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL---LGALK 232
             L  SI  L  L  L L DCK L +LP    N   +E + V+GC+ L  L   LG+L+
Sbjct: 708 KQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQ 766



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 99/245 (40%), Gaps = 59/245 (24%)

Query: 23  LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG 82
           +L  L  + L   ++L+ LP N +S+ +L+ L L GC  F   LE    +E L +L    
Sbjct: 528 VLDNLNTIELSNSQHLIHLP-NFSSMPNLERLVLEGCTSF---LEVDPSIEVLNKL---- 579

Query: 83  TAIRCPPSSIFL-MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGL 141
                    IFL +KN K L                 FP     RS  L  L   SLSG 
Sbjct: 580 ---------IFLNLKNCKKLR---------------SFP-----RSIKLECLKYLSLSGC 610

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
             L               P   GN+  L  LYL       LP SI  L  L  L LE+CK
Sbjct: 611 SDLKNF------------PEIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCK 658

Query: 202 RLQSLPQLPPNVEKVRVNGCASLVTL-LGALKLRKSSCTIIDFVDSLKLLGKNGLAISML 260
           RL+SLP          +    SL TL L A    +S   I++ ++ LK L  +G A+  L
Sbjct: 659 RLKSLPS--------SICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQL 710

Query: 261 REFLE 265
              +E
Sbjct: 711 HPSIE 715


>gi|224108373|ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1279

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 169/416 (40%), Positives = 229/416 (55%), Gaps = 53/416 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 729  MNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCS 788

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + + E +G+VESLEE D+SGT+IR  P+S+FL+K LK LS  GC              
Sbjct: 789  ELKYIPENLGKVESLEEFDVSGTSIRQLPASVFLLKKLKVLSLDGCKR------------ 836

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                        ++LPSLSGL SL  L L  C L EGA+P DIG L SL++L LS+NNFV
Sbjct: 837  -----------IVVLPSLSGLCSLEVLGLRSCNLREGALPEDIGWLSSLRSLDLSQNNFV 885

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            +LP SIN L  LE L LEDC  L+SLP++P  V+ V +NGC SL T+   +KL  S  + 
Sbjct: 886  SLPKSINRLSELEMLVLEDCTMLESLPEVPSKVQTVYLNGCISLKTIPDPIKLSSSKRSE 945

Query: 241  IDFVDSLKLLGKNG---LAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
               ++  +L   NG   + + ML  +L+ +S P  +F I VPG+EIP WF +Q++GSSI 
Sbjct: 946  FICLNCWELYNHNGQESMGLFMLERYLQGLSNPRTRFGIAVPGNEIPGWFNHQSKGSSIR 1005

Query: 298  VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGH 351
            V  PS+       +G+ AC  F     S  +   ++      YP P   + C+  +    
Sbjct: 1006 VEVPSW------SMGFVACVAFSSNGQSPSLFCHFKANGRENYPSPM-CISCNSIQVL-- 1056

Query: 352  RGSDHLWLLYLPRQSYYCNVKW-HFESNHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
              SDH+WL YL         +W H   ++  LSF   R         TG+KVK CG
Sbjct: 1057 --SDHIWLFYLSFDYLKELQEWQHGSFSNIELSFHSSR---------TGVKVKNCG 1101



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 97  NLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           NLK+L   GC       PS A       +NL+   S     +LP+   + SL    L  C
Sbjct: 660 NLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKS---IRILPNNLEMESLEVCTLDGC 716

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP-- 210
              E   P   GN++ L  L L +     L +SI+ L  L  L + +CK L+S+P     
Sbjct: 717 SKLE-KFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGC 775

Query: 211 -PNVEKVRVNGCASL 224
             +++K+ ++GC+ L
Sbjct: 776 LKSLKKLDLSGCSEL 790


>gi|224102677|ref|XP_002334150.1| predicted protein [Populus trichocarpa]
 gi|222869839|gb|EEF06970.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/385 (40%), Positives = 217/385 (56%), Gaps = 56/385 (14%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           +  CKNL  +PS+I  LKSLK L+L GC + +N+ + +G+V+SLEE D+SGT+IR  P+S
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPAS 60

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           +FL+KNLK LS  G                   +R +     +LPSLSGL SL  L L  
Sbjct: 61  LFLLKNLKVLSLDG------------------FKRLA-----VLPSLSGLCSLEVLGLRA 97

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
           C L EGA+P DIG L SL +L LS+NNFV+LP SIN L+ LEKL LEDC  L+SLP++P 
Sbjct: 98  CNLREGALPEDIGCLSSLTSLDLSRNNFVSLPRSINMLYELEKLVLEDCTMLESLPEVPS 157

Query: 212 NVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNG---LAISMLREFLEVVS 268
            V+ V +NGC SL T+   +KL  S  +    ++  +L   NG   + ++ML  +L+ +S
Sbjct: 158 KVQTVYLNGCISLKTIPDPIKLSSSKISEFICLNCWELYNHNGQDSMGLTMLERYLKGLS 217

Query: 269 APSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI 328
            P   F I VPG+EIP WF +Q +GSSI+V  PS  C M    G+ AC  F     S  +
Sbjct: 218 NPRPGFGIAVPGNEIPGWFNHQRKGSSISVQVPS--CGM----GFVACVAFSANGESPSL 271

Query: 329 RRFYR------YPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES-NHFR 381
              ++      YP P   + C+  +      SDH+WL YL   S+    +W  ES ++  
Sbjct: 272 FCHFKANGRENYPSPM-CISCNSIQVL----SDHIWLFYL---SFDHLKEWKHESFSNIE 323

Query: 382 LSFMDEREKHCPAGSGTGLKVKRCG 406
           LSF    ++         +KVK CG
Sbjct: 324 LSFHSSEQR---------VKVKNCG 339


>gi|147770134|emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/381 (40%), Positives = 214/381 (56%), Gaps = 27/381 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+EL LD T ++E+P SIE L+GLV L LK CK L  LP +I  L SL+TL L GC 
Sbjct: 785  MESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCS 844

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G ++ L +L  +G+ I+  PSSI L+  L+ LS  GC G  S +       
Sbjct: 845  ELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGGSKSR-----N 899

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            + L  R+S    L L SL+ L SL KL+LSD  L EGA+PSD+ +L  L+ L LS+NNF+
Sbjct: 900  LALSLRASPTDGLRLSSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFI 959

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
            T+P S++ L +L +L +E CK LQSLP+LP +++++  N C SL T      A  LRK  
Sbjct: 960  TVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFSYPSSAYPLRKFG 1019

Query: 238  CTIIDFVDSLKLLG--KNGLAISMLREFLEVVS-----APSH--------KFSIVVPGSE 282
                +F +  +L+G  ++    ++L+E   V S     APS         ++  VVPGS 
Sbjct: 1020 DFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEHSARYGESRYDAVVPGSR 1079

Query: 283  IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI--RRFYRYPHPAHV 340
            IP+WF +Q+EG SITV  P    N N  +G AAC VFH PK S G   R  Y   + +  
Sbjct: 1080 IPEWFTHQSEGDSITVELPPGCYNTNS-IGLAACAVFH-PKFSMGKIGRSAYFSVNESGG 1137

Query: 341  LHCSMDEKFGHRGSDHLWLLY 361
                         +DH+W  Y
Sbjct: 1138 FSLDNTTSMHFSKADHIWFGY 1158



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 35/260 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR ++L+  T + ++  SI  L  L+ L L+GCKNL    S+I+ L+SL+ L L GC K 
Sbjct: 646 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIH-LESLQILTLSGCSKL 704

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +++L EL + GTAI+  P SI  +  L   +   C    S   C       
Sbjct: 705 KKXPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCXFK---- 760

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                             L SL  L LS+C L    +P    N+ SLK L+L       L
Sbjct: 761 ------------------LKSLKTLILSNC-LRLKKLPEIQENMESLKELFLDDTGLREL 801

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTL---LGA----LK 232
           P+SI  L  L  LKL++CKRL SLP+      +++ + ++GC+ L  L   +G+    LK
Sbjct: 802 PSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLK 861

Query: 233 LRKSSCTIIDFVDSLKLLGK 252
           L+ +   I +   S+ LL +
Sbjct: 862 LKANGSGIQEVPSSITLLTR 881


>gi|359486075|ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/381 (40%), Positives = 214/381 (56%), Gaps = 27/381 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+EL LD T ++E+P SIE L+GLV L LK CK L  LP +I  L SL+TL L GC 
Sbjct: 812  MESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCS 871

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G ++ L +L  +G+ I+  PSSI L+  L+ LS  GC G  S +       
Sbjct: 872  ELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGGSKSR-----N 926

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            + L  R+S    L L SL+ L SL KL+LSD  L EGA+PSD+ +L  L+ L LS+NNF+
Sbjct: 927  LALSLRASPTDGLRLSSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFI 986

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
            T+P S++ L +L +L +E CK LQSLP+LP +++++  N C SL T      A  LRK  
Sbjct: 987  TVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFSYPSSAYPLRKFG 1046

Query: 238  CTIIDFVDSLKLLG--KNGLAISMLREFLEVVS-----APSH--------KFSIVVPGSE 282
                +F +  +L+G  ++    ++L+E   V S     APS         ++  VVPGS 
Sbjct: 1047 DFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEHSARYGESRYDAVVPGSR 1106

Query: 283  IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI--RRFYRYPHPAHV 340
            IP+WF +Q+EG SITV  P    N N  +G AAC VFH PK S G   R  Y   + +  
Sbjct: 1107 IPEWFTHQSEGDSITVELPPGCYNTNS-IGLAACAVFH-PKFSMGKIGRSAYFSVNESGG 1164

Query: 341  LHCSMDEKFGHRGSDHLWLLY 361
                         +DH+W  Y
Sbjct: 1165 FSLDNTTSMHFSKADHIWFGY 1185



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 35/260 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR ++L+  T + ++  SI  L  L+ L L+GCKNL    S+I+ L+SL+ L L GC K 
Sbjct: 673 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIH-LESLQILTLSGCSKL 731

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           + L E  G +++L EL + GTAI+  P SI  +  L   +   C    S   C       
Sbjct: 732 KKLPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCIFK---- 787

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                             L SL  L LS+C L    +P    N+ SLK L+L       L
Sbjct: 788 ------------------LKSLKTLILSNC-LRLKKLPEIQENMESLKELFLDDTGLREL 828

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTL---LGA----LK 232
           P+SI  L  L  LKL++CKRL SLP+      +++ + ++GC+ L  L   +G+    LK
Sbjct: 829 PSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLK 888

Query: 233 LRKSSCTIIDFVDSLKLLGK 252
           L+ +   I +   S+ LL +
Sbjct: 889 LKANGSGIQEVPSSITLLTR 908


>gi|105922306|gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
 gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1778

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/294 (46%), Positives = 191/294 (64%), Gaps = 21/294 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            + CLREL LD T I ++  S   L+GLV L++  CKNL  +PS+I  LKSLK L++  C 
Sbjct: 1218 INCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRLDVSDCS 1277

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + +N+ E +G+VESLEE D SGT+IR PP+S FL+KNLK LSF+GC              
Sbjct: 1278 ELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCK------------- 1324

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                R + +L   +LPSLSGL SL +LDL  C LGEGA+P DIG L SL++L LS+NNF+
Sbjct: 1325 ----RIAVNLTDQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFI 1380

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK---LRKSS 237
            +LP SIN L  LEKL L+DC  L+SLP++P  V+KV+++GC  L  +   +K   L++S 
Sbjct: 1381 SLPKSINQLSRLEKLALKDCVMLESLPEVPLKVQKVKLDGCLKLKEIPDPIKLCSLKRSE 1440

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
               ++  +     G+N + ++ML ++L+  S+P   F I VPG+EIP WF +Q+
Sbjct: 1441 FKCLNCWELYMHNGQNNMGLNMLEKYLQ-GSSPRPGFGIAVPGNEIPGWFTHQS 1493


>gi|224116202|ref|XP_002331986.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832110|gb|EEE70587.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1098

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 167/416 (40%), Positives = 227/416 (54%), Gaps = 54/416 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD+T I ++P SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 560 MNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 619

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + + E +G+VESLEE D+SGT IR  P+SIFL+KNL+ LS  GC              
Sbjct: 620 ELKCIPENLGKVESLEEFDVSGTLIRQLPASIFLLKNLEVLSMDGCK------------- 666

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                       +MLPSLS L SL  L L  C L EGA+P DIG+L SL++L LS+N FV
Sbjct: 667 ----------RIVMLPSLSSLCSLEVLGLRACNLREGALPEDIGHLSSLRSLDLSQNKFV 716

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL---RKSS 237
           +LP +IN L  LE L LEDC  L SLP++P  V+ V +NGC SL  +   +KL   ++S 
Sbjct: 717 SLPKAINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLKKIPDPIKLSSSKRSE 776

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              ++  +  K  G+  +  +ML  +L+ +S P   F I VPG+EIP WF ++++GSSI+
Sbjct: 777 FLCLNCWELYKHNGRESMGSTMLERYLQGLSNPRPGFGIAVPGNEIPGWFNHRSKGSSIS 836

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGH 351
           V  PS        +G+ AC  F+    S  +   ++      YP P     C   E  GH
Sbjct: 837 VQVPS------GRMGFFACVAFNANDESPSLFCHFKANGRENYPSPM----CINFE--GH 884

Query: 352 RGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
             SDH+WL YL         +W  ES ++  LSF    +         G+KV  CG
Sbjct: 885 LFSDHIWLFYLSFDYLKELQEWQHESFSNIELSFHSYEQ---------GVKVNNCG 931



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 43/197 (21%)

Query: 34  GCKNLVRLPS-NI-NSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPS 90
           GCK+ + L   N+ NSL   KT NL G             + +LE L + G T++     
Sbjct: 462 GCKSAINLKIINLSNSLNLSKTPNLTG-------------IPNLESLILEGCTSLSEVHP 508

Query: 91  SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLS 150
           S+ L K L+ ++   C              I ++  + ++ +L + +L G   L K    
Sbjct: 509 SLALHKKLQHVNLVNCKS------------IRILPNNLEMESLKVCTLDGCSKLEKF--- 553

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ-- 208
                    P  IGN++ L  L L + +   LP+SI+ L  L  L +  CK L+S+P   
Sbjct: 554 ---------PDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSI 604

Query: 209 -LPPNVEKVRVNGCASL 224
               +++K+ ++GC+ L
Sbjct: 605 GCLKSLKKLDLSGCSEL 621


>gi|359486073|ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 163/432 (37%), Positives = 236/432 (54%), Gaps = 53/432 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+EL LD T ++E+P SIE L+GLV L LK CK L  LP +   L SL+TL L GC 
Sbjct: 817  MESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESFCKLTSLQTLTLSGCS 876

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G ++ L +L  +G+ I+  P+SI L+  L+ LS  GC G  S +       
Sbjct: 877  ELKKLPDDMGSLQCLLKLKANGSGIQEVPTSITLLTKLQVLSLAGCKGGGSKSK-----N 931

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            + L  R+S    L L SL+ L SL KL+LSDC L EGA+PSD+ +L  L+ L LS+N+F+
Sbjct: 932  LALSLRASPTDGLRLSSLTVLHSLKKLNLSDCNLLEGALPSDLSSLSWLECLDLSRNSFI 991

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
            T+P S++ L  LE+L LE CK L+SLP+LP +VE++  N C SL T+     A   R S 
Sbjct: 992  TVP-SLSRLPRLERLILEHCKSLRSLPELPSSVEELLANDCTSLETISNPSSAYAWRNSG 1050

Query: 238  CTIIDFVDSLKLL--GKNGLAISMLREFLEVVSAP------------SHKFSIVVPGSEI 283
                +F +  +L+   ++    ++LR    V S P            S  +  VVPGS I
Sbjct: 1051 HLYSEFCNCFRLVENEQSDNVEAILRGIRLVASIPNSVAPSDIQRDLSIVYDAVVPGSSI 1110

Query: 284  PKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPH------P 337
            P+WF +Q+E  S+TV  P + CN  +++G A C VFH    + G+ +F R  +       
Sbjct: 1111 PEWFTHQSERCSVTVELPPHWCN-TRLMGLAVCVVFHA---NIGMGKFGRSAYFSMNESG 1166

Query: 338  AHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES--NHFRLSFMDEREKHCPAG 395
               LH ++   F    +DH+W  Y P    + +V   F S  +H ++SF         AG
Sbjct: 1167 GFSLHNTVSMHFSK--ADHIWFGYRP---LFGDV---FSSSIDHLKVSF---------AG 1209

Query: 396  SG-TGLKVKRCG 406
            S   G  VK+CG
Sbjct: 1210 SNRAGEVVKKCG 1221



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 35/260 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR ++L+  T + ++  SI  L  L+ L L+GCKNL    S+I+ L+SL+ L L GC K 
Sbjct: 678 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIH-LESLQILTLSGCSKL 736

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +++  EL + GTAI+  P SI  +  L  L+   C    S  SC       
Sbjct: 737 KKFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEECKSLESLPSCIFK---- 792

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                             L SL  L LS+C   +  +P    N+ SLK L+L       L
Sbjct: 793 ------------------LKSLKTLILSNCSRLK-KLPEIGENMESLKELFLDDTGLREL 833

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGA----LK 232
           P+SI  L  L  LKL++CKRL SLP+      +++ + ++GC+ L  L   +G+    LK
Sbjct: 834 PSSIEHLNGLVLLKLKNCKRLASLPESFCKLTSLQTLTLSGCSELKKLPDDMGSLQCLLK 893

Query: 233 LRKSSCTIIDFVDSLKLLGK 252
           L+ +   I +   S+ LL K
Sbjct: 894 LKANGSGIQEVPTSITLLTK 913


>gi|225465768|ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 173/492 (35%), Positives = 243/492 (49%), Gaps = 65/492 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            MECL++LLLD T +KE+P SI  + GL  L L+ CKNL  LP++I SL+SL+TL + GC 
Sbjct: 719  MECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSICSLRSLETLIVSGCS 778

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K   L E +G+++ L +L   GTAI  PP S+F ++NLK LSFRGC G  S++       
Sbjct: 779  KLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRGCKGSTSNSWISSLLF 838

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              L R +SD   L LP LSGL SL  LDLS C L + +I  ++G+L  L+ L LS+NN V
Sbjct: 839  RLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLSFLEELNLSRNNLV 898

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----LGALKLRK 235
            T+PA +N L +L  L +  CK LQ + +LPP+++ +    C SL +L          L  
Sbjct: 899  TVPAEVNRLSHLRVLSVNQCKSLQEISKLPPSIKLLDAGDCISLESLSVLSPQSPQYLSS 958

Query: 236  SSC---TIIDFVDSLKLLGKNGLAI--SMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
            SSC         +   L   NG  I   + + FL     P  ++SIV+PGS IP+WF + 
Sbjct: 959  SSCLRPVTFKLPNCFALAQDNGATILEKLRQNFL-----PEIEYSIVLPGSTIPEWFQHP 1013

Query: 291  NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPK----HSTGIR----RFYRYPHPAHVLH 342
            + GSS+T+  P    N +  +G+A C VF + +      +G+      F   P      +
Sbjct: 1014 SIGSSVTIELPPNWHNKD-FLGFALCSVFSLEEDEIIQGSGLVCCNFEFREGP------Y 1066

Query: 343  CSMDEKFGHRG-----SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSG 397
             S    + H G     +DH+WL+Y P       +      N FR      +     + SG
Sbjct: 1067 LSSSISWTHSGDRVIETDHIWLVYQPGAKLM--IPKSSSLNKFR------KITAYFSLSG 1118

Query: 398  TGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCD 457
                VK CG H  Y       D+     TR+TS                 AK +  G   
Sbjct: 1119 ASHVVKNCGIHLIYAR-----DKKVNYQTRYTS-----------------AKRSSDGSRY 1156

Query: 458  DYDEEPQPNRFR 469
               EE QP + R
Sbjct: 1157 YCLEETQPKKLR 1168


>gi|255561514|ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223538980|gb|EEF40577.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/443 (36%), Positives = 233/443 (52%), Gaps = 39/443 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L +L LD T I E+P S   L+GL  L+L+ CKNL +LPSNINSLK LK L+L GC 
Sbjct: 501 MAHLSKLGLDGTAIAEVPHSFANLTGLTFLSLRNCKNLEKLPSNINSLKYLKNLDLFGCS 560

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K ++L +++G +E LE+LD+  T++R PPSSI L+K LK LSF G  GP    +   P+ 
Sbjct: 561 KLKSLPDSLGYLECLEKLDLGKTSVRQPPSSIRLLKYLKVLSFHGI-GP---IAWQWPYK 616

Query: 121 I-NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
           I ++   + D   L LPSL+GL SLT+LDLSDC L +  IP+D   L SL+ L + +NNF
Sbjct: 617 ILSIFGITHDAVGLSLPSLNGLLSLTELDLSDCNLSDKMIPADFYTLSSLEVLNIGRNNF 676

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLG-ALKLRKSSC 238
           V +PASI+ L  L  L L+DCK L++L +LP  + ++  N C SL TL    +   K + 
Sbjct: 677 VNIPASISQLPRLRFLYLDDCKNLKALRKLPTTIHEISANNCTSLETLSSPEVIADKWNW 736

Query: 239 TIIDFVDSLKLL---GKNGLAISMLREFLEVV--------SAPSHKFSIVVPGSEIPKWF 287
            I  F +  KL    G +  A   LR  L+ +        S    +F ++VPG+E+P WF
Sbjct: 737 PIFYFTNCSKLAVNQGNDSTAFKFLRSHLQSLPMSQLQDASYTGCRFDVIVPGTEVPAWF 796

Query: 288 MYQNEGSSITVTRPSYLCNMNQVVGYAACRVF--HVPKH------STGIRRFYRYPHPAH 339
            +QN GSS+ +       N  +  G A C  F  H   H      ST I  + +     +
Sbjct: 797 SHQNVGSSLIIQLTPKWYN-EKFKGLAICLSFATHENPHLLPDGLSTDIAIYCKLEAVEY 855

Query: 340 VLHCSMD---EKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGS 396
               S      +     S+HLW+ +  R   +    W     + ++SF    E   P   
Sbjct: 856 TSTSSFKFLIYRVPSLKSNHLWMGFHSRIG-FGKSNWLNNCGYLKVSF----ESSVPC-- 908

Query: 397 GTGLKVKRCGFHPGYMHEVEEFD 419
              ++VK CG    Y  + ++++
Sbjct: 909 ---MEVKYCGIRFVYDQDEDDYN 928


>gi|255582274|ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/490 (32%), Positives = 242/490 (49%), Gaps = 55/490 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++E+  SI +L  L  L LK CK L  LP +I  LK+LK +NL GC   + +LE +G +
Sbjct: 479 ELQEIDQSIGILERLALLNLKDCKKLSILPESIYGLKALKIVNLSGCSILDYMLEELGDI 538

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN-GPPSSASCYLPFPINLMRRSSDLG 131
           +SLEELD+SGT ++ P SS    KNLK LS RGC+  PP+  + +L         + DL 
Sbjct: 539 KSLEELDVSGTTVKQPFSSFSHFKNLKILSLRGCSEQPPAIWNPHLSLLPGKGSNAMDLY 598

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           +LM+           LDL +C L E  IP+D+  L SLK   LS NNF++LPAS+  L  
Sbjct: 599 SLMV-----------LDLGNCNLQEETIPTDLSCLSSLKEFCLSGNNFISLPASVCRLSK 647

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLL- 250
           LE L L++C+ LQS+  +P +V+ +    C++L TL   L L        +F +  KL+ 
Sbjct: 648 LEHLYLDNCRNLQSMQAVPSSVKLLSAQACSALETLPETLDLSGLQSPRFNFTNCFKLVE 707

Query: 251 --GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS-SITVTRPSYLCNM 307
             G N +   MLR +L+ +S P   F I++PGSEIP W  +Q+ G  SI++  P   C+ 
Sbjct: 708 NQGCNNIGFMMLRNYLQGLSNPKPGFDIIIPGSEIPDWLSHQSLGDCSISIELPPVWCD- 766

Query: 308 NQVVGYAACRVFHVPKH------STGIRRFYRYPHPAHVLHCSMDEKFGHR---GSDHLW 358
           ++ +G+A C V+ + +          +  F +     H     +D  F      GSD +W
Sbjct: 767 SKWMGFALCAVYVIYQEPALNFIDMDLTCFIKI--KGHTWCHELDYSFAEMELVGSDQVW 824

Query: 359 LLYLPRQSYY---CNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEV 415
           L +L R  +    C       S+H  + F            G GL VK+ G    Y  +V
Sbjct: 825 LFFLSRYEFLGIDCQGVAK-TSSHAEVMF---------KAHGVGLYVKKFGVRLVYQQDV 874

Query: 416 EEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCD-------------DYDEE 462
             F++   Q     + NL   H D   S +  A    S C +             +++EE
Sbjct: 875 LVFNQKMDQICSSRNENLEVRHQDSDNSEVVGALVKRS-CIENFSNDVSESLGRSNFEEE 933

Query: 463 PQPNRFRQLE 472
           P P R ++++
Sbjct: 934 PPPKRLKEID 943


>gi|359493293|ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/438 (35%), Positives = 226/438 (51%), Gaps = 37/438 (8%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            MECL+ELLLD T IKE+  SI  L GL  L ++ CKNL  LP++I SL+SL+TL + GC 
Sbjct: 788  MECLQELLLDGTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLRSLETLIVSGCS 847

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K   L E +G+++ L +L   GTAI  PP S+F ++NLK LSFR C G  S++       
Sbjct: 848  KLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRRCKGSTSNSWISSLLF 907

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              L R +SD   L LP LSGL SL  LDLS C L + +I  ++G+L  L+ L LS+NN V
Sbjct: 908  RLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLV 967

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----LGALKLRK 235
            T+P  +N L +L  + +  CK LQ + +LPP+++ +    C SL +L          L  
Sbjct: 968  TVPEEVNRLSHLRVISVNQCKSLQEISKLPPSIKLLDAGDCISLESLSVLSPQSPQFLSS 1027

Query: 236  SSC-TIIDFVDSLKLLGKNGLAISMLREFLEVVSA---PSHKFSIVVPGSEIPKWFMYQN 291
            SSC  ++ F    KL     LA   +   LE +     P  ++SIV+PGS IP+WF + +
Sbjct: 1028 SSCLRLVTF----KLPNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTIPEWFQHPS 1083

Query: 292  EGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGH 351
             GSS+T+  P    N +  +G+A C VF + +         + P     L          
Sbjct: 1084 IGSSVTIELPPNWHNKD-FLGFALCSVFSLEEDE-----IIQGPAETEWL---------- 1127

Query: 352  RGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGY 411
            R  DH+WL+Y P              +    ++         + SG    VK CG H  Y
Sbjct: 1128 RLIDHIWLVYQPGAKLMIPKSSSPNKSRKITAYF--------SLSGASHVVKNCGIHLIY 1179

Query: 412  MHEVEEFDETTKQWTRFT 429
              + +   +T ++ +RFT
Sbjct: 1180 ARDKKVNHQTRRKESRFT 1197



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 114/239 (47%), Gaps = 35/239 (14%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           +  L+LD  T + E+  S+  L  L  L +K CK L   PS I  L+SL+ LNL GC K 
Sbjct: 649 VERLILDGCTSLPEVHPSVTKLKRLTILNVKNCKMLHYFPS-ITGLESLEVLNLSGCSKI 707

Query: 63  ENLLETVGQVESLEELDISGTAI-RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
           +   E  G +E+L EL++ GTAI   PPS +FL + L  L  + C               
Sbjct: 708 DKFPEIQGCMENLLELNLEGTAIVELPPSVVFLPR-LVLLDMKNCK-------------- 752

Query: 122 NLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           NLM         +LPS +  L SL  L LS C  G    P  + ++  L+ L L   +  
Sbjct: 753 NLM---------ILPSNIYSLKSLGTLVLSGCS-GLEIFPEIMEDMECLQELLLDGTSIK 802

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTL---LGALKL 233
            L  SI  L  L+ L +  CK L+SLP       ++E + V+GC+ L  L   LG L+ 
Sbjct: 803 ELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQF 861


>gi|359496034|ref|XP_002277500.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1132

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 223/431 (51%), Gaps = 53/431 (12%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T ++E+  ++ +L  L  L+L+ CK L  +P++I  LKSL+T    GC K EN  E  G 
Sbjct: 638  TYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPENFGN 697

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E L+EL    TAI   PSSI  ++ L+ LSF GC GPPS++   L     L R+SS+ G
Sbjct: 698  LEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTL-----LPRKSSNSG 752

Query: 132  ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
              +L  LSGLGSL +L+L DC + EGA  S +  L SL+ L LS NNF++LP+S++ L  
Sbjct: 753  KFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQ 812

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLG--------------ALKLRKSS 237
            L  LKL++C+RLQ+L +LP +++++  + C SL T+                 LK++   
Sbjct: 813  LVSLKLQNCRRLQALSELPSSIKEIDAHNCMSLETISNRSLFPSLRHVSFGECLKIKTYQ 872

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              I   + +L    +        R+  E V+    +FS VVPGSEIP WF YQ+ G+ + 
Sbjct: 873  NNIGSMLQALATFLQTHKRSRYARDNPESVTI---EFSTVVPGSEIPDWFSYQSSGNVVN 929

Query: 298  VTRPSYLCNMNQVVGYAACRVFH---VPKHSTGIRRF-----YRYPHPAHVLHCSMDEKF 349
            +  P    N N  +G+A   VF    +P ++   + F     + + + A       D  F
Sbjct: 930  IELPPNWFNSN-FLGFALSAVFGFDPLPDYNPNHKVFCLFCIFSFQNSAASYR---DNVF 985

Query: 350  GHRG------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
             +        SDHLWL Y P  S +   KWH E NHF+ +F            G    VK
Sbjct: 986  HYNSGPALIESDHLWLGYAPVVSSF---KWH-EVNHFKAAFQI---------YGRHFVVK 1032

Query: 404  RCGFHPGYMHE 414
            RCG H  Y  E
Sbjct: 1033 RCGIHLVYSSE 1043



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN------LVRLP-----------S 43
           +E L+EL  D+T I  +P SI  L  L  L+  GCK       L  LP           S
Sbjct: 698 LEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTLLPRKSSNSGKFLLS 757

Query: 44  NINSLKSLKTLNLLGCFKFENL-LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
            ++ L SLK LNL  C   E   L  +  + SLE LD+SG      PSS+  +  L +L 
Sbjct: 758 PLSGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQLVSLK 817

Query: 103 FRGC 106
            + C
Sbjct: 818 LQNC 821


>gi|296090597|emb|CBI40966.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 223/431 (51%), Gaps = 53/431 (12%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T ++E+  ++ +L  L  L+L+ CK L  +P++I  LKSL+T    GC K EN  E  G 
Sbjct: 664  TYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPENFGN 723

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E L+EL    TAI   PSSI  ++ L+ LSF GC GPPS++   L     L R+SS+ G
Sbjct: 724  LEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTL-----LPRKSSNSG 778

Query: 132  ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
              +L  LSGLGSL +L+L DC + EGA  S +  L SL+ L LS NNF++LP+S++ L  
Sbjct: 779  KFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQ 838

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLG--------------ALKLRKSS 237
            L  LKL++C+RLQ+L +LP +++++  + C SL T+                 LK++   
Sbjct: 839  LVSLKLQNCRRLQALSELPSSIKEIDAHNCMSLETISNRSLFPSLRHVSFGECLKIKTYQ 898

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              I   + +L    +        R+  E V+    +FS VVPGSEIP WF YQ+ G+ + 
Sbjct: 899  NNIGSMLQALATFLQTHKRSRYARDNPESVTI---EFSTVVPGSEIPDWFSYQSSGNVVN 955

Query: 298  VTRPSYLCNMNQVVGYAACRVFH---VPKHSTGIRRF-----YRYPHPAHVLHCSMDEKF 349
            +  P    N N  +G+A   VF    +P ++   + F     + + + A       D  F
Sbjct: 956  IELPPNWFNSN-FLGFALSAVFGFDPLPDYNPNHKVFCLFCIFSFQNSAASYR---DNVF 1011

Query: 350  GHRG------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
             +        SDHLWL Y P  S +   KWH E NHF+ +F            G    VK
Sbjct: 1012 HYNSGPALIESDHLWLGYAPVVSSF---KWH-EVNHFKAAFQI---------YGRHFVVK 1058

Query: 404  RCGFHPGYMHE 414
            RCG H  Y  E
Sbjct: 1059 RCGIHLVYSSE 1069



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN------LVRLP-----------S 43
           +E L+EL  D+T I  +P SI  L  L  L+  GCK       L  LP           S
Sbjct: 724 LEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTLLPRKSSNSGKFLLS 783

Query: 44  NINSLKSLKTLNLLGCFKFENL-LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
            ++ L SLK LNL  C   E   L  +  + SLE LD+SG      PSS+  +  L +L 
Sbjct: 784 PLSGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQLVSLK 843

Query: 103 FRGC 106
            + C
Sbjct: 844 LQNC 847


>gi|359493267|ref|XP_002271591.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1417

 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 167/479 (34%), Positives = 245/479 (51%), Gaps = 53/479 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+ELLLD T I+ +PLSI+ L GLV L L+ CKNLV LP  +  L SL+TL + GC 
Sbjct: 927  MENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCKLTSLETLIVSGCS 986

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
               NL   +G ++ L +L   GTAI  PP SI L++NL+ L + G     P+S      F
Sbjct: 987  LLNNLPRNLGSLQRLVQLHAEGTAITQPPDSIVLLRNLEVLVYPGRKILTPTSLGSLFSF 1046

Query: 120  PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
             + L R SS+   L LPS      S T LDLSDC L EGAIP+DI +L SLK L LSKNN
Sbjct: 1047 WL-LHRNSSNGIGLHLPSGFPIFRSFTNLDLSDCKLIEGAIPNDICSLISLKKLALSKNN 1105

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALK 232
            F+++PA I+ L NL+ L +  C+ L  +P+LPP++  +  + C +L      V+ L  L+
Sbjct: 1106 FLSIPAGISELTNLKDLLIGQCQSLIEIPELPPSIRDIDAHNCTALLPGSSSVSTLQGLQ 1165

Query: 233  LRKSSCTII-------DFVDSLKLLGKNGLAIS-----------MLREFLEVVSAPSHKF 274
                +C+ +       D  + L+    N  + S           ++++ LE ++     F
Sbjct: 1166 FLFYNCSKLFEDQSSDDKRNVLQRFPHNDASSSASVSSLTTSPVVMQKLLENIA-----F 1220

Query: 275  SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGI 328
            SIV PGSEIP+W  +Q+ GSSI +  P+     N ++G++ C V  H+P+      ++ +
Sbjct: 1221 SIVFPGSEIPEWIWHQHVGSSIKIELPTDW--YNDLLGFSLCSVLEHLPERIICRLNSDV 1278

Query: 329  RRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE---SNHFRLSFM 385
              +       H  H     K  + G +H+WL Y P     C+    FE    N + L  +
Sbjct: 1279 FDYGDLKDFGHDFHG----KGNNVGPEHVWLGYQP-----CSQLRLFEFNDPNDWNLIEI 1329

Query: 386  DEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
                 H  + S + + VK+CG    Y  ++E      K   +   YN+ E   D  G N
Sbjct: 1330 SFEAAHRFSSSASNV-VKKCGVCLIYAEDLEGIHPQNKIQLKSRGYNVVERSSDSAGLN 1387



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 97/195 (49%), Gaps = 23/195 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL L  T I+E+PLS   L+GLV L LK CKNL  LP++I  L+SL+ L L GC 
Sbjct: 856  MEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICKLESLEYLFLSGCS 915

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K EN  E +  +E+L+EL + GT+I   P SI  +K L  L+ R C    S     LP  
Sbjct: 916  KLENFPEMMEDMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVS-----LP-- 968

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                             +  L SL  L +S C L    +P ++G+L  L  L+       
Sbjct: 969  ---------------KGMCKLTSLETLIVSGCSLLNN-LPRNLGSLQRLVQLHAEGTAIT 1012

Query: 181  TLPASINCLFNLEKL 195
              P SI  L NLE L
Sbjct: 1013 QPPDSIVLLRNLEVL 1027



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 140/313 (44%), Gaps = 51/313 (16%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L  L+LD  + + E+  SI  LS L+ L+LK CK L   PS IN +++LK LNL GC   
Sbjct: 788  LETLILDGCSSLLEVHTSIGKLSKLILLSLKNCKKLSSFPSIIN-MEALKILNLSGCSGL 846

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +   +  G +E L EL ++ TAI   P S   +  L  L  + C    S     LP    
Sbjct: 847  KKFPDIQGNMEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCKNLKS-----LP---- 897

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                          S+  L SL  L LS C   E   P  + ++ +LK L L   +   L
Sbjct: 898  -------------ASICKLESLEYLFLSGCSKLEN-FPEMMEDMENLKELLLDGTSIEGL 943

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGAL----K 232
            P SI+ L  L  L L +CK L SLP+      ++E + V+GC+ L  L   LG+L    +
Sbjct: 944  PLSIDRLKGLVLLNLRNCKNLVSLPKGMCKLTSLETLIVSGCSLLNNLPRNLGSLQRLVQ 1003

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP---GSEIPKWFMY 289
            L      I    DS+ LL             LEV+  P  K  I+ P   GS    W ++
Sbjct: 1004 LHAEGTAITQPPDSIVLLRN-----------LEVLVYPGRK--ILTPTSLGSLFSFWLLH 1050

Query: 290  QNEGSSITVTRPS 302
            +N  + I +  PS
Sbjct: 1051 RNSSNGIGLHLPS 1063


>gi|224114295|ref|XP_002332392.1| predicted protein [Populus trichocarpa]
 gi|222832715|gb|EEE71192.1| predicted protein [Populus trichocarpa]
          Length = 350

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/322 (44%), Positives = 191/322 (59%), Gaps = 32/322 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L LD+T I ++  SI  L GL  L++  CK L  +PS+I  LKSLK L+L GC 
Sbjct: 25  MNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKTLESIPSSIGCLKSLKKLDLSGCS 84

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L E +G+VESLEE D+SGT IR  P+S+FL+KNLK LS  GC              
Sbjct: 85  ELKYLTENLGKVESLEEFDVSGTLIRQLPASVFLLKNLKVLSLDGC-------------- 130

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
               +R +     +LPSLSGL SL  L L  C L EGA+  DIG L SL++L LS+NNFV
Sbjct: 131 ----KRIA-----VLPSLSGLCSLEVLGLRACNLREGALLEDIGCLSSLRSLDLSQNNFV 181

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN L  LE L LE C  LQSL ++P  V+ V +NGC SL T+   + L  S  + 
Sbjct: 182 SLPKSINKLSELEMLVLEGCTMLQSLLEVPSKVQIVNLNGCISLKTIPDPITLSSSKRSE 241

Query: 241 IDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              ++  +L    G++ + + ML  +L+ +S P   F IVVPG+EIP WF +Q++GSSI+
Sbjct: 242 FICLNCWELYYHNGQDNMGLMMLERYLQGLSNPRPGFGIVVPGNEIPGWFNHQSKGSSIS 301

Query: 298 VTRPSYLCNMNQVVGYAACRVF 319
           V  PS+       +G+ AC  F
Sbjct: 302 VQVPSW------SIGFVACVAF 317


>gi|147789504|emb|CAN71924.1| hypothetical protein VITISV_006193 [Vitis vinifera]
          Length = 1297

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 165/480 (34%), Positives = 243/480 (50%), Gaps = 34/480 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+ELLLD T I+ +P SI+ L  LV L L+ CKNLV LP  + +L SL+TL + GC 
Sbjct: 827  MENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCS 886

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
            +  NL + +G ++ L +    GTAI  PP SI L++NLK L + GC    P+S      F
Sbjct: 887  QLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSLFSF 946

Query: 120  PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
             + L R  S+  +L LPS  S   S T LDLSDC L EGAIP+ I +L SLK L LS+N+
Sbjct: 947  WL-LHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSRND 1005

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            F++ PA I+ L +L+ L+L   + L  +P+LPP+V  +  + C +L  L G   LR +  
Sbjct: 1006 FLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTAL--LPGPSSLRTNPV 1063

Query: 239  TI-----IDF---VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
             I      DF   V S   +     +  ++++  E ++     FSIV PGS IP+W  +Q
Sbjct: 1064 VIRGMKYKDFHIIVSSTASVSSLTTSPVLMQKLFENIA-----FSIVFPGSGIPEWIWHQ 1118

Query: 291  NEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIRRFYRYPHPAHVLHCS 344
            + GSSI +  P+   N +  +G+A C V   +P+      ++ +  +       H  H  
Sbjct: 1119 SVGSSIKIELPTDWYN-DDFLGFALCSVLEQLPERIICHLNSDVFYYGDLKDFGHDFHW- 1176

Query: 345  MDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
               K  H GS+H+WL + P  Q          + NH  +SF      H    S + + VK
Sbjct: 1177 ---KGNHVGSEHVWLGHQPCSQLRLFQFNDPNDWNHIEISF---EAAHRFNSSASNV-VK 1229

Query: 404  RCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCDDYDEEP 463
            +CG    Y   +E      ++  +    N+ E   D  G N +   ++ SG  D     P
Sbjct: 1230 KCGVCLIYTEVLEGIHPGNRKQLKSRGCNVVERSSDRAGFNRSGMDSSYSGSHDRPTNHP 1289



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 126/312 (40%), Gaps = 72/312 (23%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV----------------- 69
           L +LTL GC +LV++  +I  L  L  LNL  C K  + L  +                 
Sbjct: 688 LEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELK 747

Query: 70  ------GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
                 G +E L EL ++ TAI   PSS+  +  L  L  + C    S     LP     
Sbjct: 748 KFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKS-----LP----- 797

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                        S+  L SL  L  S C   E   P  + ++ +LK L L   +   LP
Sbjct: 798 ------------TSVCKLESLEYLFPSGCSKLEN-FPEMMEDMENLKELLLDGTSIEGLP 844

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
           +SI+ L  L  L L +CK L SLP+      ++E + V+GC+ L  L   LG+L+     
Sbjct: 845 SSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQ----- 899

Query: 238 CTIIDFVDSLKLLGKNGLAIS-------MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
                    L     +G AI+       +LR    ++     + +    GS    W +++
Sbjct: 900 --------HLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSLFSFWLLHR 951

Query: 291 NEGSSITVTRPS 302
           N  + I++  PS
Sbjct: 952 NGSNGISLRLPS 963



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 50/226 (22%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  + +K++  S  LL  L  + L  C++L+ +P    S  +L+ L L GC  
Sbjct: 639 EDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSS 698

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              +  ++G++  L  L+               +KN K L                    
Sbjct: 699 LVKVHPSIGKLSKLILLN---------------LKNCKKL-------------------- 723

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
               RS         S+  + +L  L+LSDC   +   P   GN+  L  LYL+      
Sbjct: 724 ----RS-------FLSIINMEALEILNLSDCSELK-KFPDIQGNMEHLLELYLASTAIEE 771

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASL 224
           LP+S+  L  L  L L+ CK L+SLP     +E +     +GC+ L
Sbjct: 772 LPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCSKL 817


>gi|224120756|ref|XP_002330944.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
 gi|222873138|gb|EEF10269.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
          Length = 813

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/271 (47%), Positives = 171/271 (63%), Gaps = 20/271 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL LD T I E+  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 560 MNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS 619

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + +N+ E +G+VESLEE D+SGT+IR PP+SIFL+K+LK LSF GC              
Sbjct: 620 ELKNIPENLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDGCK------------- 666

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
               R + +     LPSLSGL SL  LDL  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 667 ----RIAVNPTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFV 722

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL---RKSS 237
           +LP SIN LF LE L LEDC+ L+SLP++P  V+ + +NGC  L  +   +KL   ++S 
Sbjct: 723 SLPRSINKLFGLETLVLEDCRMLESLPEVPSKVQTLNLNGCIRLKEIPDPIKLSSSKRSE 782

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVS 268
              ID  +  +  G++ L ++ML  +L+V S
Sbjct: 783 FICIDCRELYEHKGQDSLGLTMLERYLQVFS 813


>gi|359493250|ref|XP_002268462.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1439

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 165/480 (34%), Positives = 241/480 (50%), Gaps = 34/480 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+ELLLD T I+ +P SI+ L  LV L L+ CKNLV LP  + +L SL+TL + GC 
Sbjct: 969  MENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCS 1028

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
            +  NL + +G ++ L +    GTAI  PP SI L++NLK L + GC    P+S      F
Sbjct: 1029 QLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSLFSF 1088

Query: 120  PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
             + L R  S+  +L LPS  S   S T LDLSDC L EGAIP+ I +L SLK L LS+N+
Sbjct: 1089 WL-LHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSRND 1147

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            F++ PA I+ L +L+ L+L   + L  +P+LPP+V  +  + C +L  L G   LR +  
Sbjct: 1148 FLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTAL--LPGPSSLRTNPV 1205

Query: 239  TI-----IDF---VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
             I      DF   V S   +     +  ++++  E ++     FSIV PGS IP+W  +Q
Sbjct: 1206 VIRGMKYKDFHIIVSSTASVSSLTTSPVLMQKLFENIA-----FSIVFPGSGIPEWIWHQ 1260

Query: 291  NEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIRRFYRYPHPAHVLHCS 344
            + GSSI +  P+   N +  +G+A C V   +P+      ++ +  +       H  H  
Sbjct: 1261 SVGSSIKIELPTDWYN-DDFLGFALCSVLEQLPERIICHLNSDVFYYGDLKDFGHDFHW- 1318

Query: 345  MDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
               K  H GS+H+WL + P  Q          + NH  +SF    E      S     VK
Sbjct: 1319 ---KGNHVGSEHVWLGHQPCSQLRLFQFNDPNDWNHIEISF----EAAHRFNSSASNVVK 1371

Query: 404  RCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCDDYDEEP 463
            +CG    Y   +E      ++  +    N+ E   D  G N +   ++ SG  D     P
Sbjct: 1372 KCGVCLIYTEVLEGIHPGNRKQLKSRGCNVVERSSDRAGFNRSGMDSSYSGSHDRPTNHP 1431



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 126/312 (40%), Gaps = 72/312 (23%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV----------------- 69
            L +LTL GC +LV++  +I  L  L  LNL  C K  + L  +                 
Sbjct: 830  LEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELK 889

Query: 70   ------GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
                  G +E L EL ++ TAI   PSS+  +  L  L  + C    S     LP     
Sbjct: 890  KFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKS-----LP----- 939

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                         S+  L SL  L  S C   E   P  + ++ +LK L L   +   LP
Sbjct: 940  ------------TSVCKLESLEYLFPSGCSKLEN-FPEMMEDMENLKELLLDGTSIEGLP 986

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
            +SI+ L  L  L L +CK L SLP+      ++E + V+GC+ L  L   LG+L+     
Sbjct: 987  SSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQ----- 1041

Query: 238  CTIIDFVDSLKLLGKNGLAIS-------MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
                     L     +G AI+       +LR    ++     + +    GS    W +++
Sbjct: 1042 --------HLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSLFSFWLLHR 1093

Query: 291  NEGSSITVTRPS 302
            N  + I++  PS
Sbjct: 1094 NGSNGISLRLPS 1105



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 50/226 (22%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  + +K++  S  LL  L  + L  C++L+ +P    S  +L+ L L GC  
Sbjct: 781 EDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSS 840

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              +  ++G++  L  L+               +KN K L                    
Sbjct: 841 LVKVHPSIGKLSKLILLN---------------LKNCKKL-------------------- 865

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
               RS         S+  + +L  L+LSDC   +   P   GN+  L  LYL+      
Sbjct: 866 ----RS-------FLSIINMEALEILNLSDCSELK-KFPDIQGNMEHLLELYLASTAIEE 913

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASL 224
           LP+S+  L  L  L L+ CK L+SLP     +E +     +GC+ L
Sbjct: 914 LPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCSKL 959


>gi|359493487|ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 192/332 (57%), Gaps = 22/332 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L  L L+ T IK +PLSIE L+GL  L LK CK+L  LP +I  LKSLKTL L GC 
Sbjct: 753  MEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLTLCGCS 812

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G ++ L EL+  G+ I+  P SI L+ NL+ LS  GC G   S S  + F 
Sbjct: 813  ELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGG-DSKSRNMVFS 871

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             +    SS    L LPS SGL SL  L L  C L EGA+PSD+G++ SL+ L LS+N+F+
Sbjct: 872  FH----SSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFI 927

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
            T+PAS++ L  L  L LE CK LQSLP+LP +VE +  + C SL T     GA   +K  
Sbjct: 928  TIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFSCSSGAYTSKKFG 987

Query: 238  CTIIDFVDSLKLLGKNGLAI-SMLREFLEVVSA------------PSHKFSIVVPGSEIP 284
                +F +  +L    G  I   + E ++++S+            P ++++ +VPGS IP
Sbjct: 988  DLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPWGIPTPHNEYNALVPGSRIP 1047

Query: 285  KWFMYQNEGSSITVTRPSYLCNMNQVVGYAAC 316
            +WF +Q+ G S+ +  P +  N  +++G A C
Sbjct: 1048 EWFRHQSVGCSVNIELPPHWYN-TKLMGLAFC 1078


>gi|147787197|emb|CAN64645.1| hypothetical protein VITISV_042806 [Vitis vinifera]
          Length = 754

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 163/479 (34%), Positives = 242/479 (50%), Gaps = 52/479 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L+ELLLD T I+ +P SIE L GLV L L+ CKNLV L + + +L SL+TL + GC 
Sbjct: 263 MDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCL 322

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
           +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P+S      F
Sbjct: 323 QLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSF 382

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
            +     S+ +G  +  S S   SL+ LD+SDC L EGAIP+ I +L SLK L LS+NNF
Sbjct: 383 WLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNF 442

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALKL 233
           +++PA I+ L NL+ L+L  C+ L  +P+LPP+V  +  + C +L      V  L  L+ 
Sbjct: 443 LSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVNTLQGLQF 502

Query: 234 RKSSCT--IID----------------FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
              +C+  + D                +V S         +  M+++ LE ++     FS
Sbjct: 503 LFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIA-----FS 557

Query: 276 IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKHSTGIRRFYRY 334
           IV PG+ IP+W  +QN GSSI +  P+   + +  +G+A C V  H+P+      R   +
Sbjct: 558 IVFPGTGIPEWIWHQNVGSSIKIQLPTDWXS-DXFLGFALCSVLEHLPE------RIICH 610

Query: 335 PHPAHVLHCSMDEKFGHR--------GSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFM 385
            + + V +    + FGH         GS+H+WL Y P  Q          E NH  +SF 
Sbjct: 611 LN-SDVFNYGDLKDFGHDFHWTGNIVGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISF- 668

Query: 386 DEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
              E      S T   VK+CG    Y  ++E      ++  +    N+ E   D  G N
Sbjct: 669 ---EAAHRFNSXTSNVVKKCGVCLIYAEDLEGIHPQNRKQLKSRGCNVVERSSDRAGLN 724



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L EL L  T I+E+P SI  L+GLV L LK CKNL  L ++I  LKSL+ L+L GC 
Sbjct: 192 MENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCS 251

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E+  E +  +++L+EL + GT I   PSSI  +K L  L+ R C              
Sbjct: 252 KLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCK------------- 298

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            NL+  S+         +  L SL  L +S C L    +P ++G+L  L  L+       
Sbjct: 299 -NLVSLSN--------GMCNLTSLETLIVSGC-LQLNNLPRNLGSLQRLAQLHADGTAIA 348

Query: 181 TLPASINCLFNLEKLKLEDCKRL 203
             P SI  L NL+ L    CK L
Sbjct: 349 QPPDSIVLLRNLQVLIYPGCKIL 371



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 116/277 (41%), Gaps = 50/277 (18%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L+  PS I+ +K+L+ LN  GC   +      G +E+L EL ++ TAI   PSSI  +  
Sbjct: 159 LICFPSIID-MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTG 217

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L  L  + C               NL   S+        S+  L SL  L LS C   E 
Sbjct: 218 LVLLDLKWCK--------------NLKSLST--------SICKLKSLENLSLSGCSKLE- 254

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VE 214
           + P  + N+ +LK L L       LP+SI  L  L  L L  CK L SL     N   +E
Sbjct: 255 SFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLE 314

Query: 215 KVRVNGCASLVTL---LGAL----KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVV 267
            + V+GC  L  L   LG+L    +L      I    DS+ LL             L+V+
Sbjct: 315 TLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRN-----------LQVL 363

Query: 268 SAPSHKFSIVVP---GSEIPKWFMYQNEGSSITVTRP 301
             P  K  I+ P   GS    W ++ N  + I +  P
Sbjct: 364 IYPGCK--ILAPTSLGSLFSFWLLHGNSSNGIGLRLP 398


>gi|359487015|ref|XP_003633506.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1610

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/476 (32%), Positives = 241/476 (50%), Gaps = 46/476 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L+ELLLD T I+ +PLSIE L GL+ L L+ CKNLV L + + +L SL+TL + GC 
Sbjct: 1008 MDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSLSNGMCNLTSLETLIVSGCS 1067

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
            +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P+S      F
Sbjct: 1068 QLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPNSLGSLFSF 1127

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             +     S+ +G  +  S S   SL+ LD+SDC L EGAIP+ I +L SLK L LS+NNF
Sbjct: 1128 WLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNF 1187

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALKL 233
            +++PA I+ L NL+ L+L  C+ L  +P+LPP+V  +  + C +L      V+ L  L+ 
Sbjct: 1188 LSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVSTLQGLQF 1247

Query: 234  ----------------RKSSCTIIDFVDSLKLLGKNGLAIS--MLREFLEVVSAPSHKFS 275
                            +++   I   +       ++ +  S  M+++ LE ++     FS
Sbjct: 1248 LFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASESSVTTSPVMMQKLLENIA-----FS 1302

Query: 276  IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIR 329
            IV PG+ IP W  +QN GSSI +  P+   + +  +G+A C V  H+P+      ++ + 
Sbjct: 1303 IVFPGTGIPDWIWHQNVGSSIKIQLPTDWYS-DDFLGFALCSVLEHLPERIICHLNSDVF 1361

Query: 330  RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDER 388
             +       H  H + +      GS+H+WL Y P  Q          E NH  +SF    
Sbjct: 1362 DYGDLKDFGHDFHWTGNIV----GSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISF---- 1413

Query: 389  EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
            E      S     VK+CG    Y  ++E      ++  + +  N+ E   D  G N
Sbjct: 1414 EAAHRFNSSASNVVKKCGVCLIYAEDLEGIRPQNRKQLKSSGCNVVERSSDRAGLN 1469



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 100/203 (49%), Gaps = 23/203 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL L  T I+E+P SI  L+GLV L LK CKNL  LP++I  LKSL+ L+L GC 
Sbjct: 937  MENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCS 996

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K E+  E    +++L+EL + GT I   P SI  +K L  L+ R C              
Sbjct: 997  KLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCK------------- 1043

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             NL+  S+         +  L SL  L +S C      +P ++G+L  L  L+       
Sbjct: 1044 -NLVSLSN--------GMCNLTSLETLIVSGCS-QLNNLPRNLGSLQRLAQLHADGTAIA 1093

Query: 181  TLPASINCLFNLEKLKLEDCKRL 203
              P SI  L NL+ L    CK L
Sbjct: 1094 QPPDSIVLLRNLQVLIYPGCKIL 1116



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 117/282 (41%), Gaps = 54/282 (19%)

Query: 35   CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
            CK L+  PS I+ +K+L+ LN   C   +      G +E+L EL ++ TAI   PSSI  
Sbjct: 901  CKKLICFPSIID-MKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGH 959

Query: 95   MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
            +  L  L  + C    S     LP                  S+  L SL  L LS C  
Sbjct: 960  LTGLVLLDLKWCKNLKS-----LP-----------------TSICKLKSLENLSLSGCSK 997

Query: 155  GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN-- 212
             E + P    N+ +LK L L       LP SI  L  L  L L  CK L SL     N  
Sbjct: 998  LE-SFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSLSNGMCNLT 1056

Query: 213  -VEKVRVNGCASLVTL---LGALKLRKSSCTIIDFVDSLKLLGKNGLAIS------MLRE 262
             +E + V+GC+ L  L   LG+L+              L  L  +G AI+      +L  
Sbjct: 1057 SLETLIVSGCSQLNNLPRNLGSLQ-------------RLAQLHADGTAIAQPPDSIVLLR 1103

Query: 263  FLEVVSAPSHKFSIVVP---GSEIPKWFMYQNEGSSITVTRP 301
             L+V+  P  K  I+ P   GS    W ++ N  + I +  P
Sbjct: 1104 NLQVLIYPGCK--ILAPNSLGSLFSFWLLHGNSSNGIGLRLP 1143


>gi|147771827|emb|CAN62507.1| hypothetical protein VITISV_028498 [Vitis vinifera]
          Length = 587

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 158/476 (33%), Positives = 240/476 (50%), Gaps = 46/476 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L+ELLLD T I+ +P SIE L GLV L L+ CKNLV L + + +L SL+TL + GC 
Sbjct: 96  MDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCL 155

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
           +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P+S      F
Sbjct: 156 QLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSF 215

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
            +     S+ +G  +  S S   SL+ LD+SDC L EGAIP+ I +L SLK L LS+NNF
Sbjct: 216 WLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNF 275

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALKL 233
           +++PA I+ L NL+ L+L  C+ L  +P+LPP+V  +  + C +L      V  L  L+ 
Sbjct: 276 LSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVNTLQGLQF 335

Query: 234 RKSSCT--IID----------------FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
              +C+  + D                +V S         +  M+++ LE ++     FS
Sbjct: 336 LFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIA-----FS 390

Query: 276 IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIR 329
           IV PG+ IP+W  +QN GSSI +  P+   + +  +G+A C V  H+P+      ++ + 
Sbjct: 391 IVFPGTGIPEWIWHQNVGSSIKIQLPTDW-HSDDFLGFALCSVLEHLPERIICHLNSDVF 449

Query: 330 RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDER 388
            +       H  H + +      GS+H+WL Y P  Q          E NH  +SF    
Sbjct: 450 NYGDLKDFGHDFHWTGN----IVGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEAAH 505

Query: 389 EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
             +  A +     VK+CG    Y  ++E      ++  +    N+ E   D  G N
Sbjct: 506 RFNSSASN----VVKKCGVCLIYAEDLEGIHPQNRKQLKSRGCNVVERSSDRAGLN 557



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L EL L  T I+E+P SI  L+GLV L LK CKNL  L ++I  LKSL+ L+L GC 
Sbjct: 25  MENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCS 84

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E+  E +  +++L+EL + GT I   PSSI  +K L  L+ R C              
Sbjct: 85  KLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCK------------- 131

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            NL+  S+         +  L SL  L +S C L    +P ++G+L  L  L+       
Sbjct: 132 -NLVSLSN--------GMCNLTSLETLIVSGC-LQLNNLPRNLGSLQRLAQLHADGTAIT 181

Query: 181 TLPASINCLFNLEKLKLEDCKRL 203
             P SI  L NL+ L    CK L
Sbjct: 182 QPPDSIVLLRNLQVLIYPGCKIL 204



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 110/267 (41%), Gaps = 49/267 (18%)

Query: 48  LKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           +K+L+ LN  GC   +      G +E+L EL ++ TAI   PSSI  +  L  L  + C 
Sbjct: 1   MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 60

Query: 108 GPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH 167
                         NL   S+        S+  L SL  L LS C   E + P  + N+ 
Sbjct: 61  --------------NLKSLST--------SICKLKSLENLSLSGCSKLE-SFPEVMENMD 97

Query: 168 SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASL 224
           +LK L L       LP+SI  L  L  L L  CK L SL     N   +E + V+GC  L
Sbjct: 98  NLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQL 157

Query: 225 VTL---LGAL----KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV 277
             L   LG+L    +L      I    DS+ LL             L+V+  P  K  I+
Sbjct: 158 NNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRN-----------LQVLIYPGCK--IL 204

Query: 278 VP---GSEIPKWFMYQNEGSSITVTRP 301
            P   GS    W ++ N  + I +  P
Sbjct: 205 APTSLGSLFSFWLLHGNSSNGIGLRLP 231


>gi|359495276|ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 159/476 (33%), Positives = 239/476 (50%), Gaps = 46/476 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L+ELLLD T I+ +P SIE L GLV L L+ CKNLV L + + +L SL+TL + GC 
Sbjct: 1051 MDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCL 1110

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
            +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P+S      F
Sbjct: 1111 QLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSF 1170

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             +     S+ +G  +  S S   SL+ LD+SDC L EGAIP+ I +L SLK L LS+NNF
Sbjct: 1171 WLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNF 1230

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALKL 233
            +++PA I+ L NL+ L+L  C+ L  +P+LPP+V  +  + C +L      V  L  L+ 
Sbjct: 1231 LSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVNTLQGLQF 1290

Query: 234  RKSSCT--IID----------------FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
               +C+  + D                +V S         +  M+++ LE ++     FS
Sbjct: 1291 LFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIA-----FS 1345

Query: 276  IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIR 329
            IV PG+ IP+W  +QN GSSI +  P+   + +  +G+A C V  H+P+      ++ + 
Sbjct: 1346 IVFPGTGIPEWIWHQNVGSSIKIQLPTDW-HSDDFLGFALCSVLEHLPERIICHLNSDVF 1404

Query: 330  RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDER 388
             +       H  H + +      GS+H+WL Y P  Q          E NH  +SF    
Sbjct: 1405 NYGDLKDFGHDFHWTGNIV----GSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISF---- 1456

Query: 389  EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
            E      S     VK+CG    Y  ++E      ++  +    N+ E   D  G N
Sbjct: 1457 EAAHRFNSSASNVVKKCGVCLIYAEDLEGIHPQNRKQLKSRGCNVVERSSDRAGLN 1512



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL L  T I+E+P SI  L+GLV L LK CKNL  L ++I  LKSL+ L+L GC 
Sbjct: 980  MENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCS 1039

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K E+  E +  +++L+EL + GT I   PSSI  +K L  L+ R C              
Sbjct: 1040 KLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCK------------- 1086

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             NL+  S+         +  L SL  L +S C L    +P ++G+L  L  L+       
Sbjct: 1087 -NLVSLSN--------GMCNLTSLETLIVSGC-LQLNNLPRNLGSLQRLAQLHADGTAIT 1136

Query: 181  TLPASINCLFNLEKLKLEDCKRL 203
              P SI  L NL+ L    CK L
Sbjct: 1137 QPPDSIVLLRNLQVLIYPGCKIL 1159



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 117/280 (41%), Gaps = 50/280 (17%)

Query: 35   CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
            CK L+  PS I+ +K+L+ LN  GC   +      G +E+L EL ++ TAI   PSSI  
Sbjct: 944  CKKLICFPSIID-MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGH 1002

Query: 95   MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
            +  L  L  + C    S ++                      S+  L SL  L LS C  
Sbjct: 1003 LTGLVLLDLKWCKNLKSLST----------------------SICKLKSLENLSLSGCSK 1040

Query: 155  GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN-- 212
             E + P  + N+ +LK L L       LP+SI  L  L  L L  CK L SL     N  
Sbjct: 1041 LE-SFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLT 1099

Query: 213  -VEKVRVNGCASLVTL---LGAL----KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
             +E + V+GC  L  L   LG+L    +L      I    DS+ LL             L
Sbjct: 1100 SLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRN-----------L 1148

Query: 265  EVVSAPSHKFSIVVP---GSEIPKWFMYQNEGSSITVTRP 301
            +V+  P  K  I+ P   GS    W ++ N  + I +  P
Sbjct: 1149 QVLIYPGCK--ILAPTSLGSLFSFWLLHGNSSNGIGLRLP 1186


>gi|296081000|emb|CBI18504.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 160/461 (34%), Positives = 232/461 (50%), Gaps = 36/461 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L+ELLLD T I+ +P SI+ L GLV L ++ C+NLV LP  +  L SL+TL + GC 
Sbjct: 72  MENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLTSLETLIVSGCS 131

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN--GPPSSASCYLP 118
           +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P S  S    
Sbjct: 132 QLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKILAPTSLGSL--- 188

Query: 119 FPINLMRRSSDLG-ALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
           F   LM R+S  G  L LP S     S T LDLSD  L EGAIP+DI +L SLK L LS+
Sbjct: 189 FSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGAIPNDICSLISLKKLDLSR 248

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGA 230
           NNF+++PA I+ L NL+ L+L  C+ L  +P+LPP++  V  + C +L      V  L  
Sbjct: 249 NNFLSIPAGISQLTNLKDLRLGHCQSLIIIPELPPSIRDVDAHNCTALFPTSSSVCTLQG 308

Query: 231 LKLRKSSCT--IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFM 288
           L+    +C+  + D     K         +  ++ LE ++     FSIV PGS IP+W  
Sbjct: 309 LQFLFYNCSKPVEDQSSDQKRNALQRFPHNDAQKLLENIA-----FSIVFPGSGIPEWIW 363

Query: 289 YQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIRRFYRYPHPAHVLH 342
           +QN GS I +  P+   N +  +G+  C +  H+P+      ++ +  +  +    H  H
Sbjct: 364 HQNVGSFIKIELPTDWYN-DDFLGFVLCSILEHLPERIICRLNSDVFYYGDFKDIGHDFH 422

Query: 343 CSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLK 401
              D      GS+H+WL Y P  Q          + N+  +SF    E      S     
Sbjct: 423 WKGDI----LGSEHVWLGYQPCSQLRLFQFNDPNDWNYIEISF----EAAHRFNSSASNV 474

Query: 402 VKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVG 442
           VK+CG    Y  ++E      ++  +    N+ E   D  G
Sbjct: 475 VKKCGVCLIYAEDLEGIHLQNRKQLKSRGCNVVERSSDRDG 515



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 99/203 (48%), Gaps = 23/203 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L EL L  T I+E+P SI  ++ LV L LK CKNL  LP++I  LKSL+ L L GC 
Sbjct: 1   MDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCS 60

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K EN  E +  +E+L+EL + GT+I   PSSI  +K L  L+ R C    S     LP  
Sbjct: 61  KLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVS-----LP-- 113

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                            +  L SL  L +S C      +P ++G+L  L  L+       
Sbjct: 114 ---------------KGMCKLTSLETLIVSGCS-QLNNLPRNLGSLQRLAQLHADGTAIT 157

Query: 181 TLPASINCLFNLEKLKLEDCKRL 203
             P SI  L NL+ L    CK L
Sbjct: 158 QPPESIVLLRNLQVLIYPGCKIL 180



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 53/245 (21%)

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           ++ L EL ++ TAI   PSSI  +  L  L  + C    S        P ++ R      
Sbjct: 1   MDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKS-------LPTSICR------ 47

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
                    L SL  L LS C   E   P  + ++ +LK L L   +   LP+SI+ L  
Sbjct: 48  ---------LKSLEYLFLSGCSKLEN-FPEVMVDMENLKELLLDGTSIEGLPSSIDRLKG 97

Query: 192 LEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKSSCTIIDFVD 245
           L  L +  C+ L SLP+      ++E + V+GC+ L  L   LG+L+             
Sbjct: 98  LVLLNMRKCQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPRNLGSLQ------------- 144

Query: 246 SLKLLGKNGLAIS------MLREFLEVVSAPSHKFSIVVP---GSEIPKWFMYQNEGSSI 296
            L  L  +G AI+      +L   L+V+  P  K  I+ P   GS    W M++N  + +
Sbjct: 145 RLAQLHADGTAITQPPESIVLLRNLQVLIYPGCK--ILAPTSLGSLFSFWLMHRNSSNGV 202

Query: 297 TVTRP 301
            +  P
Sbjct: 203 GLRLP 207


>gi|147822714|emb|CAN68293.1| hypothetical protein VITISV_015601 [Vitis vinifera]
          Length = 1254

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 185/328 (56%), Gaps = 14/328 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L++LLLD T IKE+P SI  L GL  L+L+ CKNL  LP++I SL+SL+TL + GC 
Sbjct: 797  MESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCS 856

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                L E +G ++ L  L   GTAI  PP S+  ++NLK LSFRGC G  +S S      
Sbjct: 857  NLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKG-STSNSWIXSLV 915

Query: 121  INLMRR-SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              L+RR +SD   L LP LSGL SL  LDLS C L +G+I  ++G L  L+ L LS+NN 
Sbjct: 916  FRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRNNL 975

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----LGALKLR 234
            V +P  ++ L NL  L +  CK LQ + +LPP+++ +    C SL  L          L 
Sbjct: 976  VMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEFLSIPSPQSPQYLS 1035

Query: 235  KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA---PSHKFSIVVPGSEIPKWFMYQN 291
             SSC       S KL     LA   +   LE +     P  ++SIV+PGS IP+WF + +
Sbjct: 1036 SSSCL---HPLSFKLSNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTIPEWFQHPS 1092

Query: 292  EGSSITVTRPSYLCNMNQVVGYAACRVF 319
             GSS T+  P    N +  +G+A C VF
Sbjct: 1093 IGSSETIELPPNWHNKD-FLGFALCSVF 1119



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 114/237 (48%), Gaps = 33/237 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           ++ L+LD  T + E+  S+  L  L  L +K CK L   PS I  L+SLK LNL GC K 
Sbjct: 658 VKRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPS-ITGLESLKVLNLSGCSKL 716

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +E L EL++ GTAI   PSS+  +  L +L  + C               N
Sbjct: 717 DKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCK--------------N 762

Query: 123 LMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           L          +LPS +  L SL  L  S C  G    P  +  + SL+ L L   +   
Sbjct: 763 LK---------ILPSNICSLKSLETLVFSGCS-GLEMFPEIMEVMESLQKLLLDGTSIKE 812

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTL---LGALK 232
           LP SI  L  L+ L L  CK L+SLP       ++E + V+GC++L  L   LG+L+
Sbjct: 813 LPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQ 869


>gi|359495221|ref|XP_002274238.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1181

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 185/328 (56%), Gaps = 14/328 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L++LLLD T IKE+P SI  L GL  L+L+ CKNL  LP++I SL+SL+TL + GC 
Sbjct: 784  MESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCS 843

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                L E +G ++ L  L   GTAI  PP S+  ++NLK LSFRGC G  +S S      
Sbjct: 844  NLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKG-STSNSWISSLV 902

Query: 121  INLMRR-SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              L+RR +SD   L LP LSGL SL  LDLS C L +G+I  ++G L  L+ L LS+NN 
Sbjct: 903  FRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRNNL 962

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----LGALKLR 234
            V +P  ++ L NL  L +  CK LQ + +LPP+++ +    C SL  L          L 
Sbjct: 963  VMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEFLSIPSPQSPQYLS 1022

Query: 235  KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA---PSHKFSIVVPGSEIPKWFMYQN 291
             SSC       S KL     LA   +   LE +     P  ++SIV+PGS IP+WF + +
Sbjct: 1023 SSSCL---HPLSFKLSNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTIPEWFQHPS 1079

Query: 292  EGSSITVTRPSYLCNMNQVVGYAACRVF 319
             GSS T+  P    N +  +G+A C VF
Sbjct: 1080 IGSSETIELPPNWHNKD-FLGFALCSVF 1106



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 114/237 (48%), Gaps = 33/237 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           ++ L+LD  T + E+  S+  L  L  L +K CK L   PS I  L+SLK LNL GC K 
Sbjct: 645 VKRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPS-ITGLESLKVLNLSGCSKL 703

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +E L EL++ GTAI   PSS+  +  L +L  + C               N
Sbjct: 704 DKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCK--------------N 749

Query: 123 LMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           L          +LPS +  L SL  L  S C  G    P  +  + SL+ L L   +   
Sbjct: 750 LK---------ILPSNICSLKSLETLVFSGCS-GLEMFPEIMEVMESLQKLLLDGTSIKE 799

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTL---LGALK 232
           LP SI  L  L+ L L  CK L+SLP       ++E + V+GC++L  L   LG+L+
Sbjct: 800 LPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQ 856


>gi|451798988|gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 188/332 (56%), Gaps = 22/332 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL LD + I E+P SI  L+GLV L LK CK L  LP +   L SL TL L GC 
Sbjct: 810  MESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCS 869

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G ++ L EL+  G+ I+  P SI L+ NL+ LS  GC G   S S  + F 
Sbjct: 870  ELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGG-DSKSRNMVFS 928

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             +    SS    L LPS SGL SL  L L  C L EGA+PSD+G++ SL+ L LS+N+F+
Sbjct: 929  FH----SSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFI 984

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
            T+PAS++ L  L  L LE CK LQSLP+LP +VE +  + C SL T     GA   +K  
Sbjct: 985  TIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFSCSSGAYTSKKFG 1044

Query: 238  CTIIDFVDSLKLLGKNGLAI-SMLREFLEVVSA------------PSHKFSIVVPGSEIP 284
                +F +  +L    G  I   + E ++++S+            P ++++ +VPGS IP
Sbjct: 1045 DLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPWGIPTPHNEYNALVPGSRIP 1104

Query: 285  KWFMYQNEGSSITVTRPSYLCNMNQVVGYAAC 316
            +WF +Q+ G S+ +  P +  N  +++G A C
Sbjct: 1105 EWFRHQSVGCSVNIELPPHWYN-TKLMGLAFC 1135



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 102/206 (49%), Gaps = 25/206 (12%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR L+L   T + E+  SI  L  L+ L L+GCK L    S+I+ ++SL+ L L GC K 
Sbjct: 671 LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCSKL 729

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +E L  L + GTAI+  P SI  +  L  L+ + C    S     LP    
Sbjct: 730 KKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLES-----LP---- 780

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                         S+  L SL  L LS+C   +  +P    N+ SL  L+L  +  + L
Sbjct: 781 -------------RSIFKLKSLKTLILSNCTRLK-KLPEIQENMESLMELFLDGSGIIEL 826

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ 208
           P+SI CL  L  L L++CK+L SLPQ
Sbjct: 827 PSSIGCLNGLVFLNLKNCKKLASLPQ 852



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 49/191 (25%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAI 85
           L +L LKGC +LV +  +I +LK L  LNL GC K ++   ++  +ESL+ L +SG + +
Sbjct: 671 LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMESLQILTLSGCSKL 729

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT 145
           +  P     M++L  LS  G      +A   LP                  S+  L  L 
Sbjct: 730 KKFPEVQGNMEHLPNLSLEG------TAIKGLPL-----------------SIENLTGLA 766

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
            L+L +C   E ++P  I  L SLKTL LS                       +C RL+ 
Sbjct: 767 LLNLKECKSLE-SLPRSIFKLKSLKTLILS-----------------------NCTRLKK 802

Query: 206 LPQLPPNVEKV 216
           LP++  N+E +
Sbjct: 803 LPEIQENMESL 813


>gi|359493483|ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 191/337 (56%), Gaps = 23/337 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L  L L+ T IK +PLSIE L+GL  L LK CK+L  LP +I  LKSLKTL L GC 
Sbjct: 747  MEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSGCS 806

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + ++L + +G ++ L EL+  G+ ++  P SI L+ NL+ LS  GC G  S +   +   
Sbjct: 807  ELKDLPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGCKGGESKSRNMI--- 863

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  SS    L LPS SGL SL  L L  C L EGA+PSD+G++ SL+ L LS+N+F+
Sbjct: 864  --FSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFI 921

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL---GALKLRKSS 237
            T+PAS++ L  L  L LE CK LQSLP+LP +VE +  + C SL T      A   +K  
Sbjct: 922  TIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFTCSSSAYTSKKFG 981

Query: 238  CTIIDFVDSLKLLGKNGLAI-SMLREFLEVVSA-------------PSHKFSIVVPGSEI 283
                +F +  +L    G  I   + E ++++S+             P ++++ +VPG+ I
Sbjct: 982  DLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPDRGIPTPHNEYNALVPGNRI 1041

Query: 284  PKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFH 320
            P+WF +Q+ G S+ +  P +  N  +++G A C   +
Sbjct: 1042 PEWFRHQSVGCSVNIELPQHWYN-TKLMGLAFCAALN 1077


>gi|359493485|ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/394 (38%), Positives = 215/394 (54%), Gaps = 47/394 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L  +  + T I+E+P SI  L+ LV L L+ C+ L  LP +I  L SL+TL L GC 
Sbjct: 368 LENLSRISFEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCS 427

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + L + +G+++ L EL++ GT I+   SSI L+ NL+ LS  GC G  S +   + F 
Sbjct: 428 KLKKLPDDLGRLQCLAELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISF- 486

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                RSS    L LP LSGL SL  L+LSDC L EGA+P+D+ +L SL+ LYL KN+F+
Sbjct: 487 -----RSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFI 541

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----------LGA 230
           TLPAS++ L  L++L LE CK L+SLP+LP ++E +  + CASL TL          LG 
Sbjct: 542 TLPASLSRLSRLKRLTLEHCKSLRSLPELPSSIEYLNAHSCASLETLSCSSSTYTSKLGD 601

Query: 231 LKLRKSSCTII------DFVDSLKLLGKNGLAISMLREFLE--VVSAPSHKFSIVVPGSE 282
           L+   ++C  +      D V++  +L    LA SM +  LE    S   H +  +V GS 
Sbjct: 602 LRFNFTNCFRLGENQGSDIVET--ILEGTQLASSMAK-LLEPDERSLLQHGYQALVQGSR 658

Query: 283 IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLH 342
           IPKWF +++EGS +    P +  N  +++G AAC VF+      G    Y    P   L 
Sbjct: 659 IPKWFTHRSEGSKVIAELPPHWYN-TKLMGLAACVVFNFKGAVDG----YLGTFP---LA 710

Query: 343 CSMDEKFG----HRG--------SDHLWLLYLPR 364
           C +D  +     H          SDH W  Y+ R
Sbjct: 711 CFLDGHYATLSDHNSLWTSSIIESDHTWFAYISR 744


>gi|147821215|emb|CAN66453.1| hypothetical protein VITISV_004613 [Vitis vinifera]
          Length = 1441

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 157/476 (32%), Positives = 239/476 (50%), Gaps = 46/476 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L+ELLLD T I+ +P SIE L GL+ L L+ CKNLV L + + +L SL+TL + GC 
Sbjct: 950  MDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLSNGMCNLTSLETLIVSGCS 1009

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
            +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P+S      F
Sbjct: 1010 QLNNLPRNLGSLQCLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPNSLGSLFSF 1069

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             +      + +G  +  S S   SL+ LD+SDC L EGAIP+ I +L SLK L LS+NNF
Sbjct: 1070 WLLHGNSPNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNF 1129

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALKL 233
            +++PA I+ L NL+ L+L  C+ L  +P+LPP+V  +  + C +L      V+ L  L+ 
Sbjct: 1130 LSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVSTLQGLQF 1189

Query: 234  RKSSCT--IID----------------FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
               +C+  + D                +V S         +  M+++ LE ++     FS
Sbjct: 1190 LFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIA-----FS 1244

Query: 276  IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIR 329
            IV PG+ IP W  +QN GSSI +  P+   + +  +G+A C V  H+P+      ++ + 
Sbjct: 1245 IVFPGTGIPDWIWHQNVGSSIKIQLPTDWYS-DDFLGFALCSVLEHLPERIICHLNSDVF 1303

Query: 330  RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDER 388
             +       H  H + +      GS+H+WL Y P  Q          E NH  +SF    
Sbjct: 1304 DYGDLKDFGHDFHWTGNIV----GSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISF---- 1355

Query: 389  EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
            E      S     VK+CG    Y  ++E      ++  + +  N+ E   D  G N
Sbjct: 1356 EAAHRFNSSASNVVKKCGVCLIYAEDLEGIRPQNRKQLKSSGCNVVERSSDRAGLN 1411



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 101/203 (49%), Gaps = 23/203 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL L  T I+E+P SI  L+GLV L LK CKNL  LP++I  LKSL+ L+L GC 
Sbjct: 879  MENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCS 938

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K E+  E    +++L+EL + GT I   PSSI  +K L  L+ R C              
Sbjct: 939  KLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCK------------- 985

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             NL+  S+         +  L SL  L +S C      +P ++G+L  L  L+       
Sbjct: 986  -NLVSLSN--------GMCNLTSLETLIVSGCS-QLNNLPRNLGSLQCLAQLHADGTAIA 1035

Query: 181  TLPASINCLFNLEKLKLEDCKRL 203
              P SI  L NL+ L    CK L
Sbjct: 1036 QPPDSIVLLRNLQVLIYPGCKIL 1058



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 116/280 (41%), Gaps = 50/280 (17%)

Query: 35   CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
            CK L+  PS I+ +K+L+ LN   C   +      G +E+L EL ++ TAI   PSSI  
Sbjct: 843  CKKLICFPSIID-MKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGH 901

Query: 95   MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
            +  L  L  + C    S     LP                  S+  L SL  L LS C  
Sbjct: 902  LTGLVLLDLKWCKNLKS-----LP-----------------TSICKLKSLENLSLSGCSK 939

Query: 155  GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN-- 212
             E + P    N+ +LK L L       LP+SI  L  L  L L  CK L SL     N  
Sbjct: 940  LE-SFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLSNGMCNLT 998

Query: 213  -VEKVRVNGCASLVTL---LGAL----KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
             +E + V+GC+ L  L   LG+L    +L      I    DS+ LL             L
Sbjct: 999  SLETLIVSGCSQLNNLPRNLGSLQCLAQLHADGTAIAQPPDSIVLLRN-----------L 1047

Query: 265  EVVSAPSHKFSIVVP---GSEIPKWFMYQNEGSSITVTRP 301
            +V+  P  K  I+ P   GS    W ++ N  + I +  P
Sbjct: 1048 QVLIYPGCK--ILAPNSLGSLFSFWLLHGNSPNGIGLRLP 1085


>gi|451798990|gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 189/337 (56%), Gaps = 23/337 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL LD + I E+P SI  L+GLV L LK CK L  LP +   L SL+TL L GC 
Sbjct: 818  MESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCS 877

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + ++L + +G ++ L EL+  G+ ++  P SI L+ NL+ LS  GC G  S +   +   
Sbjct: 878  ELKDLPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGCKGGESKSRNMI--- 934

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  SS    L LPS SGL SL  L L  C L EGA+PSD+G++ SL+ L LS+N+F+
Sbjct: 935  --FSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFI 992

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----------LG 229
            T+PAS++ L  L  L LE CK LQSLP+LP +VE +  + C SL T             G
Sbjct: 993  TIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFTCSSSAYTSKKFG 1052

Query: 230  ALKLRKSSCTIIDFVDSLKLLGK--NGLAI-SMLREFL---EVVSAPSHKFSIVVPGSEI 283
             L+   ++C  +       ++G    G+ + S + +FL     +  P ++++ +VPG+ I
Sbjct: 1053 DLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPDRGIPTPHNEYNALVPGNRI 1112

Query: 284  PKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFH 320
            P+WF +Q+ G S+ +  P +  N  +++G A C   +
Sbjct: 1113 PEWFRHQSVGCSVNIELPQHWYN-TKLMGLAFCAALN 1148



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 116/236 (49%), Gaps = 31/236 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR L+L   T + E+  SI  L  L+ L L+GCK L    S+I+ ++SL+ L L GC K 
Sbjct: 679 LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCSKL 737

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +E L  L + GTAI+  P SI  +  L  L+ + C    S     LP    
Sbjct: 738 KKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLES-----LP---- 788

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                         S+  L SL  L LS+C   +  +P    N+ SL  L+L  +  + L
Sbjct: 789 -------------RSIFKLKSLKTLILSNCTRLK-KLPEIQENMESLMELFLDGSGIIEL 834

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL---LGALK 232
           P+SI CL  L  L L++CK+L SLPQ    +  +R   + GC+ L  L   LG+L+
Sbjct: 835 PSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQ 890


>gi|225460354|ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 153/427 (35%), Positives = 221/427 (51%), Gaps = 28/427 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LR+LLLD+T ++E+P SI  L+GLV L L  CK LV LP ++  L SL+ L L GC 
Sbjct: 721  MKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCS 780

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G +  L  L+  G+ I+  P SI L+ NL+ LS  GC       S +    
Sbjct: 781  ELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLW---- 836

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  SS    L L SL  L S+  L LSDC L EGA+PSD+ +L SL++L LSKNNF+
Sbjct: 837  ------SSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLESLDLSKNNFI 890

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-LGALKLRKSSCT 239
            T+PAS+N L  L  L L  CK LQS+P+LP  ++KV  + C SL T  L A   RK +  
Sbjct: 891  TIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETFSLSACASRKLNQL 950

Query: 240  IIDFVDSLKLL-GKNGLAISMLREFLEVVSA-------------PSHKFSIVVPGSEIPK 285
               F D  +L+  ++   +  + + +++ S+             P + F ++VPGS IP+
Sbjct: 951  NFTFSDCFRLVENEHSDTVGAILQGIQLASSIPKFVDANKGSPVPYNDFHVIVPGSSIPE 1010

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSM 345
            WF++QN GSS+TV  P +  N  +++G A C VFH      G  ++  Y    H     M
Sbjct: 1011 WFIHQNMGSSVTVELPPHWYNA-KLMGLAVCAVFHADPIDWGYLQYSLY-RGEHKYDSYM 1068

Query: 346  DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE-SNHFRLSFMDEREKHCPAGSGTGLKVKR 404
             + +     DH+W  Y        +  W  E S   ++ F     K C       + VK+
Sbjct: 1069 LQTWSPMKGDHVWFGYQSLVGQEDDRMWFGERSGTLKILFSGHCIKSCIVCVQPEVVVKK 1128

Query: 405  CGFHPGY 411
            CG    Y
Sbjct: 1129 CGVRLAY 1135



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 33/167 (19%)

Query: 74  SLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +LE L + G  + ++  PS I  ++ L  L+  GC    S AS            S  + 
Sbjct: 652 NLERLILEGCTSMVKVHPS-IGALQKLIFLNLEGCKNLKSFAS------------SIHMN 698

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           +L + +LSG   L K             P  + N+ SL+ L L +     LP+SI  L  
Sbjct: 699 SLQILTLSGCSKLKKF------------PEMLENMKSLRQLLLDETALRELPSSIGRLNG 746

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTL---LGALK 232
           L  L L +CK+L SLPQ    +  +++    GC+ L  L   LG+L+
Sbjct: 747 LVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLR 793


>gi|147828597|emb|CAN68630.1| hypothetical protein VITISV_003859 [Vitis vinifera]
          Length = 1500

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 158/476 (33%), Positives = 239/476 (50%), Gaps = 46/476 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L+ELLLD T I+ +P SI+ L GLV L L+ CKNLV L + + +L SL+TL + GC 
Sbjct: 1009 MDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLVVSGCS 1068

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
            +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P+S      F
Sbjct: 1069 QLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSF 1128

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             +     S+ +G  +  S S   SL+ LDLSDC L EGAIP+ I +L SLK L LS+NNF
Sbjct: 1129 WLLHGNSSNGIGLRLPSSFSSFRSLSNLDLSDCKLIEGAIPNGICSLISLKKLDLSQNNF 1188

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALKL 233
            +++PA I+ L NLE L+L  C+ L  +P+LP ++  +  + C +L      V+ L  L+ 
Sbjct: 1189 LSIPAGISELTNLEDLRLGQCQSLTGIPELPLSLRDIDAHNCTALLPGSSSVSTLQGLQF 1248

Query: 234  RKSSCT--IID----------------FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
               +C+  + D                +V S         +  M+++ LE ++     FS
Sbjct: 1249 LFYNCSKPVEDQSSDDKRTELQLFPHIYVSSTASDSSVTTSPVMMQKLLENIA-----FS 1303

Query: 276  IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIR 329
            IV PG+ IP+W  +QN GSSI +  P+   + +  +G+A C V  H+P+      ++ + 
Sbjct: 1304 IVFPGTGIPEWIWHQNVGSSIKIQLPTDWYS-DDFLGFALCSVLEHLPERIICHLNSDVF 1362

Query: 330  RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDER 388
             +       H  H + D      GS+H+WL Y P  Q          E NH  +SF    
Sbjct: 1363 DYGDLKDFGHDFHWTGDIV----GSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISF---- 1414

Query: 389  EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
            E      S     VK+CG    Y  +++      ++  +    N+ E   D  G N
Sbjct: 1415 EAAHRFNSSASNVVKKCGVCLIYAEDLDGIHPQNRKQLKSRGCNVVERSSDRAGLN 1470



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 99/203 (48%), Gaps = 23/203 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL L  T I+E+P SI  L+GLV L LK CKNL  LP++I  LKSL+ L+L GC 
Sbjct: 938  MENLFELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCS 997

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K  +  E    ++ L+EL + GT I   PSSI  +K L  L+ R C              
Sbjct: 998  KLGSFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCK------------- 1044

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             NL+  S+         +  L SL  L +S C      +P ++G+L  L  L+       
Sbjct: 1045 -NLVSLSN--------GMCNLTSLETLVVSGCS-QLNNLPRNLGSLQRLAQLHADGTAIA 1094

Query: 181  TLPASINCLFNLEKLKLEDCKRL 203
              P SI  L NL+ L    CK L
Sbjct: 1095 QPPDSIVLLRNLQVLIYPGCKIL 1117



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 139/314 (44%), Gaps = 55/314 (17%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L++L+LD  + + E+  SI  L+ L+ L LK CK L+  PS I+ +K+L+ LN  GC   
Sbjct: 870  LQKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIID-MKALEILNFSGCSGL 928

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +      G +E+L EL ++ TAI   PSSI  +  L  L  + C    S     LP    
Sbjct: 929  KKFPNIQGNMENLFELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKS-----LP---- 979

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                          S+  L SL  L LS C    G+ P    N+  LK L L       L
Sbjct: 980  -------------TSICKLKSLENLSLSGCS-KLGSFPEVTENMDKLKELLLDGTPIEVL 1025

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL---LGALKLRKS 236
            P+SI+ L  L  L L  CK L SL     N   +E + V+GC+ L  L   LG+L+    
Sbjct: 1026 PSSIDRLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLVVSGCSQLNNLPRNLGSLQ---- 1081

Query: 237  SCTIIDFVDSLKLLGKNGLAIS------MLREFLEVVSAPSHKFSIVVP---GSEIPKWF 287
                      L  L  +G AI+      +L   L+V+  P  K  I+ P   GS    W 
Sbjct: 1082 ---------RLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCK--ILAPTSLGSLFSFWL 1130

Query: 288  MYQNEGSSITVTRP 301
            ++ N  + I +  P
Sbjct: 1131 LHGNSSNGIGLRLP 1144


>gi|105922722|gb|ABF81433.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1446

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/294 (45%), Positives = 179/294 (60%), Gaps = 20/294 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 749  MNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCS 808

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + +N+ + +G+VE LEE+D+SGT+IR PP+SIFL+K+LK LS  GC              
Sbjct: 809  ELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCK------------- 855

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                R + +     LPSLSGL SL  LDL  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 856  ----RIAVNPTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQNNFV 911

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            +LP SIN L  LE L LEDC+ L+SLP++P  V+ V +NGC  L  +   +KL  S  + 
Sbjct: 912  SLPESINQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIKLSSSKRSE 971

Query: 241  IDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
               ++   L    G++   ++ML  +L+ +  P   F I VPG+EIP WF +QN
Sbjct: 972  FICLNCWALYEHNGQDSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQN 1025



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +LPS   + SL    L  C   E   P  +GN++ L  L+L +     L +SI+ L  LE
Sbjct: 718 ILPSNLEMESLKVCILDGCSKLE-KFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLE 776

Query: 194 KLKLEDCKRLQSLP---QLPPNVEKVRVNGCASL 224
            L + +CK L+S+P   +   +++K+ ++GC+ L
Sbjct: 777 VLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSEL 810


>gi|147768286|emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 153/427 (35%), Positives = 221/427 (51%), Gaps = 28/427 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LR+LLLD+T ++E+P SI  L+GLV L L  CK LV LP ++  L SL+ L L GC 
Sbjct: 762  MKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCS 821

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G +  L  L+  G+ I+  P SI L+ NL+ LS  GC       S +    
Sbjct: 822  ELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLW---- 877

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  SS    L L SL  L S+  L LSDC L EGA+PSD+ +L SL++L LSKNNF+
Sbjct: 878  ------SSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLESLDLSKNNFI 931

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-LGALKLRKSSCT 239
            T+PAS+N L  L  L L  CK LQS+P+LP  ++KV  + C SL T  L A   RK +  
Sbjct: 932  TIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETFSLSACASRKLNQL 991

Query: 240  IIDFVDSLKLL-GKNGLAISMLREFLEVVSA-------------PSHKFSIVVPGSEIPK 285
               F D  +L+  ++   +  + + +++ S+             P + F ++VPGS IP+
Sbjct: 992  NFTFSDCFRLVENEHSDTVGAILQGIQLASSIPKFVDANKGSPVPYNDFHVIVPGSSIPE 1051

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSM 345
            WF++QN GSS+TV  P +  N  +++G A C VFH      G  ++  Y    H     M
Sbjct: 1052 WFIHQNMGSSVTVELPPHWYNA-KLMGLAVCAVFHADPIDWGYLQYSLY-RGEHKYDSYM 1109

Query: 346  DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE-SNHFRLSFMDEREKHCPAGSGTGLKVKR 404
             + +     DH+W  Y        +  W  E S   ++ F     K C       + VK+
Sbjct: 1110 LQTWSPMKGDHVWFGYQSLVGXEDDRMWFGERSGTXKILFSGHCIKSCJVCVQPEVVVKK 1169

Query: 405  CGFHPGY 411
            CG    Y
Sbjct: 1170 CGVRLAY 1176



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 33/167 (19%)

Query: 74  SLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +LE L + G  + ++  PS I  ++ L  L+  GC    S AS            S  + 
Sbjct: 693 NLERLILEGCKSMVKVHPS-IGALQKLIFLNLXGCKNLKSFAS------------SIHMN 739

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           +L + +LSG   L K             P  + N+ SL+ L L +     LP+SI  L  
Sbjct: 740 SLQILTLSGCSKLKKF------------PEMLENMKSLRQLLLDETALRELPSSIGRLNG 787

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTL---LGALK 232
           L  L L +CK+L SLPQ    +  +++    GC+ L  L   LG+L+
Sbjct: 788 LVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLR 834


>gi|359493269|ref|XP_003634556.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1299

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/446 (35%), Positives = 225/446 (50%), Gaps = 42/446 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+ELLLD T I+ +P SI+ L GLV L ++ C+NLV LP  +  L SL+TL + GC 
Sbjct: 808  MENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLTSLETLIVSGCS 867

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN--GPPSSASCYLP 118
            +  NL   +G ++ L +L   GTAI  PP SI L++NL+ L + GC    P S  S    
Sbjct: 868  QLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKILAPTSLGSL--- 924

Query: 119  FPINLMRRSSDLG-ALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
            F   LM R+S  G  L LP S     S T LDLSD  L EGAIP+DI +L SLK L LS+
Sbjct: 925  FSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGAIPNDICSLISLKKLDLSR 984

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGA 230
            NNF+++PA I+ L NL+ L+L  C+ L  +P+LPP++  V  + C +L      V  L  
Sbjct: 985  NNFLSIPAGISQLTNLKDLRLGHCQSLIIIPELPPSIRDVDAHNCTALFPTSSSVCTLQG 1044

Query: 231  LKLRKSSCT--IIDFV-----DSLKLLGKNGLAISMLREFLEVVSAPSHK------FSIV 277
            L+    +C+  + D       ++L+    N  + S     +        K      FSIV
Sbjct: 1045 LQFLFYNCSKPVEDQSSDQKRNALQRFPHNDASSSASVSSVTTSPVVRQKLLENIAFSIV 1104

Query: 278  VPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIRRF 331
             PGS IP+W  +QN GS I +  P+   N +  +G+  C +  H+P+      ++ +  +
Sbjct: 1105 FPGSGIPEWIWHQNVGSFIKIELPTDWYN-DDFLGFVLCSILEHLPERIICRLNSDVFYY 1163

Query: 332  YRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDEREK 390
              +    H  H   D      GS+H+WL Y P  Q          + N+  +SF    E 
Sbjct: 1164 GDFKDIGHDFHWKGD----ILGSEHVWLGYQPCSQLRLFQFNDPNDWNYIEISF----EA 1215

Query: 391  HCPAGSGTGLKVKRCGFHPGYMHEVE 416
                 S     VK+CG    Y  ++E
Sbjct: 1216 AHRFNSSASNVVKKCGVCLIYAEDLE 1241



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 99/203 (48%), Gaps = 23/203 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L EL L  T I+E+P SI  ++ LV L LK CKNL  LP++I  LKSL+ L L GC 
Sbjct: 737 MDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCS 796

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K EN  E +  +E+L+EL + GT+I   PSSI  +K L  L+ R C    S     LP  
Sbjct: 797 KLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVS-----LP-- 849

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                            +  L SL  L +S C      +P ++G+L  L  L+       
Sbjct: 850 ---------------KGMCKLTSLETLIVSGCS-QLNNLPRNLGSLQRLAQLHADGTAIT 893

Query: 181 TLPASINCLFNLEKLKLEDCKRL 203
             P SI  L NL+ L    CK L
Sbjct: 894 QPPESIVLLRNLQVLIYPGCKIL 916



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 132/297 (44%), Gaps = 54/297 (18%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  LS L+ L LK CK L   PS I+ +K+L+ LN  GC   +   +  G ++ L EL 
Sbjct: 686 SIGKLSKLILLNLKNCKKLSSFPSIID-MKALEILNFSGCSGLKKFPDIRGNMDHLLELH 744

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           ++ TAI   PSSI  +  L  L  + C    S        P ++ R              
Sbjct: 745 LASTAIEELPSSIGHITRLVLLDLKRCKNLKS-------LPTSICR-------------- 783

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            L SL  L LS C   E   P  + ++ +LK L L   +   LP+SI+ L  L  L +  
Sbjct: 784 -LKSLEYLFLSGCSKLEN-FPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRK 841

Query: 200 CKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKSSCTIIDFVDSLKLLGKN 253
           C+ L SLP+      ++E + V+GC+ L  L   LG+L+              L  L  +
Sbjct: 842 CQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPRNLGSLQ-------------RLAQLHAD 888

Query: 254 GLAIS------MLREFLEVVSAPSHKFSIVVP---GSEIPKWFMYQNEGSSITVTRP 301
           G AI+      +L   L+V+  P  K  I+ P   GS    W M++N  + + +  P
Sbjct: 889 GTAITQPPESIVLLRNLQVLIYPGCK--ILAPTSLGSLFSFWLMHRNSSNGVGLRLP 943


>gi|224116238|ref|XP_002331995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832119|gb|EEE70596.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 955

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/293 (45%), Positives = 178/293 (60%), Gaps = 20/293 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 680 MNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCS 739

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + +N+ + +G+VE LEE+D+SGT+IR PP+SIFL+K+LK LS  GC              
Sbjct: 740 ELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCK------------- 786

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
               R + +     LPSLSGL SL  LDL  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 787 ----RIAVNPTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQNNFV 842

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN L  LE L LEDC+ L+SLP++P  V+ V +NGC  L  +   +KL  S  + 
Sbjct: 843 SLPESINQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIKLSSSKRSE 902

Query: 241 IDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
              ++   L    G++   ++ML  +L+ +  P   F I VPG+EIP WF +Q
Sbjct: 903 FICLNCWALYEHNGQDSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQ 955



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +LPS   + SL    L  C   E   P  +GN++ L  L+L +     L +SI+ L  LE
Sbjct: 649 ILPSNLEMESLKVCILDGCSKLE-KFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLE 707

Query: 194 KLKLEDCKRLQSLP---QLPPNVEKVRVNGCASL 224
            L + +CK L+S+P   +   +++K+ ++GC+ L
Sbjct: 708 VLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSEL 741


>gi|298204574|emb|CBI23849.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 163/456 (35%), Positives = 236/456 (51%), Gaps = 50/456 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L++L LD T ++E+P SIE L+GLV L LK CK L  LP +I  L SL+TL L GC 
Sbjct: 419 MESLKKLFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCS 478

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L + +G ++ L +L  +GT I+  P+SI L+  L+ LS  GC G  S +       
Sbjct: 479 ELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGCKGGESKSR-----N 533

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           + L  RSS    L    L  L SL KL+LS C L EGA+PSD+ +L  L+ L LS+N+F+
Sbjct: 534 LALCLRSSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSRNSFI 593

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
           T+P +++ L  L++L LE CK L+SLP+LP N+EK+  N C SL T      A   R S 
Sbjct: 594 TVP-NLSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCTSLETFSNPSSAYAWRNSR 652

Query: 238 CTIIDFVDSLKLL--GKNGLAISMLREFLEVVS-----APSHK---FSIVVPGSEIPKWF 287
                F +  +L+   ++    ++LR    V S     AP ++   +  VVPGS IP+WF
Sbjct: 653 HLNFQFYNCFRLVENEQSDNVEAILRGIRLVASISNFVAPHYELKWYDAVVPGSSIPEWF 712

Query: 288 MYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPH------PAHVL 341
             Q+ G S+TV  P + C   +++G A C VFH    + G+ +F R  +          L
Sbjct: 713 TDQSLGCSVTVELPPHWCT-TRLMGLAVCFVFH---PNIGMGKFGRSEYFSMNESGGFSL 768

Query: 342 HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSG-TGL 400
           H +    F    +DH+W  Y P    Y  V +    +H ++SF         AGS   G 
Sbjct: 769 HNTASTHFSK--ADHIWFGYRP---LYGEV-FSPSIDHLKVSF---------AGSNRAGE 813

Query: 401 KVKRCGFHPGYMHE-----VEEFDETTKQWTRFTSY 431
            VK+CG    +  +      EE +   + W     Y
Sbjct: 814 VVKKCGARLVFEQDEPCGREEEMNHVHEDWLEVPFY 849



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 13/197 (6%)

Query: 48  LKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           L+SL+T+ L GC K +   E  G +++L EL + GTAI+  P SI  +  L  L+   C 
Sbjct: 324 LESLQTITLSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECK 383

Query: 108 GPPSSASCYLPF-PINLMRRSSDLGALMLPSLS-GLGSLTKLDLSDCGLGEGAIPSDIGN 165
              S   C      +  +  S+      LP +   + SL KL L D GL E  +PS I +
Sbjct: 384 SLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRE--LPSSIEH 441

Query: 166 LHS-LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGC 221
           L+  +     +     +LP SI  L +L+ L L  C  L+ LP    +++   K++ NG 
Sbjct: 442 LNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGT 501

Query: 222 A-----SLVTLLGALKL 233
                 + +TLL  L++
Sbjct: 502 GIQEVPTSITLLTKLEV 518


>gi|359486071|ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 159/426 (37%), Positives = 228/426 (53%), Gaps = 45/426 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L++L LD T ++E+P SIE L+GLV L LK CK L  LP +I  L SL+TL L GC 
Sbjct: 812  MESLKKLFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCS 871

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G ++ L +L  +GT I+  P+SI L+  L+ LS  GC G  S +       
Sbjct: 872  ELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGCKGGESKSR-----N 926

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            + L  RSS    L    L  L SL KL+LS C L EGA+PSD+ +L  L+ L LS+N+F+
Sbjct: 927  LALCLRSSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSRNSFI 986

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
            T+P +++ L  L++L LE CK L+SLP+LP N+EK+  N C SL T      A   R S 
Sbjct: 987  TVP-NLSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCTSLETFSNPSSAYAWRNSR 1045

Query: 238  CTIIDFVDSLKLL--GKNGLAISMLREFLEVVS-----APSHK---FSIVVPGSEIPKWF 287
                 F +  +L+   ++    ++LR    V S     AP ++   +  VVPGS IP+WF
Sbjct: 1046 HLNFQFYNCFRLVENEQSDNVEAILRGIRLVASISNFVAPHYELKWYDAVVPGSSIPEWF 1105

Query: 288  MYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPH------PAHVL 341
              Q+ G S+TV  P + C   +++G A C VFH    + G+ +F R  +          L
Sbjct: 1106 TDQSLGCSVTVELPPHWCT-TRLMGLAVCFVFH---PNIGMGKFGRSEYFSMNESGGFSL 1161

Query: 342  HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSG-TGL 400
            H +    F    +DH+W  Y P    Y  V +    +H ++SF         AGS   G 
Sbjct: 1162 HNTASTHFSK--ADHIWFGYRP---LYGEV-FSPSIDHLKVSF---------AGSNRAGE 1206

Query: 401  KVKRCG 406
             VK+CG
Sbjct: 1207 VVKKCG 1212



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 15/242 (6%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR ++L+  T + ++  SI  L  L+ L L+GCKNL    S+I+ L+SL+T+ L GC K 
Sbjct: 673 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFSSSIH-LESLQTITLSGCSKL 731

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF-PI 121
           +   E  G +++L EL + GTAI+  P SI  +  L  L+   C    S   C      +
Sbjct: 732 KKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPGCIFKLKSL 791

Query: 122 NLMRRSSDLGALMLPSLS-GLGSLTKLDLSDCGLGEGAIPSDIGNLHS-LKTLYLSKNNF 179
             +  S+      LP +   + SL KL L D GL E  +PS I +L+  +     +    
Sbjct: 792 KTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRE--LPSSIEHLNGLVLLKLKNCKKL 849

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCA-----SLVTLLGAL 231
            +LP SI  L +L+ L L  C  L+ LP    +++   K++ NG       + +TLL  L
Sbjct: 850 ASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKL 909

Query: 232 KL 233
           ++
Sbjct: 910 EV 911


>gi|359495285|ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 158/475 (33%), Positives = 235/475 (49%), Gaps = 55/475 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL L  T I+E+P SI  L+GLV L LK CKNL  LP++I  LKSL+ L+L GC 
Sbjct: 936  MENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCS 995

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + E+  E    +++L+EL + GT I   PSSI  +K L  L+ R C    S ++      
Sbjct: 996  QLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLLSLSNGI---- 1051

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  S+ +G  +  S S   SL+ LD+SDC L EGAIP+ I +L SLK L LS+NNF+
Sbjct: 1052 ------SNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFL 1105

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL------VTLLGALKLR 234
            ++PA I+ L NL+ L+L  C+ L  +P+LPP+V  +  + C SL      V+ L  L+  
Sbjct: 1106 SIPAGISELTNLKDLRLAQCQSLTGIPELPPSVRDIDAHNCTSLLPGSSSVSTLQGLQFL 1165

Query: 235  KSSCT--IID----------------FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
              +C+  + D                +V S         +  M+++ LE ++     FSI
Sbjct: 1166 FYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIA-----FSI 1220

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIRR 330
            V PG+ IP+W  +QN GSSI +  P+   + +  +G+A C V  H+P+      ++ +  
Sbjct: 1221 VFPGTGIPEWIWHQNVGSSIKIQLPTNWYS-DDFLGFALCSVLEHLPERIICHLNSDVFN 1279

Query: 331  FYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDERE 389
            +       H  H + +      GS+H+WL Y P  Q          E NH  +SF    E
Sbjct: 1280 YGDLKDFGHDFHWTGN----IVGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISF----E 1331

Query: 390  KHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
                  S     VK+CG    Y  ++E      ++  +    N+ E   D  G N
Sbjct: 1332 AAHRFNSSASNVVKKCGVCLIYAEDLEGIHPQNRKQLKSRGCNVVERSSDRAGLN 1386



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 14/134 (10%)

Query: 135  LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
             PS+  + +L  L+ S C  G    P+  GN+ +L  LYL+      LP+SI  L  L  
Sbjct: 906  FPSIIDMKALEILNFSGCS-GLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVL 964

Query: 195  LKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLG 251
            L L+ CK L+SLP       ++E + ++GC+ L          +S   + + +D+LK L 
Sbjct: 965  LDLKWCKNLKSLPTSICKLKSLENLSLSGCSQL----------ESFPEVTENMDNLKELL 1014

Query: 252  KNGLAISMLREFLE 265
             +G  I +L   +E
Sbjct: 1015 LDGTPIEVLPSSIE 1028


>gi|332330342|gb|AEE43928.1| TIR-NBS-LRR resistance protein muRdr1D [Rosa multiflora]
          Length = 1156

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 236/500 (47%), Gaps = 64/500 (12%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K + + E VGQ
Sbjct: 661  TNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQ 719

Query: 72   VESLEELDISGTAIRCPPSSI--FLMKNLKTLSFRGCNGPPSSASCYLPFPINLM----- 124
            ++ L +L + GTA+   PSSI   + ++L  L  +G        S +L     ++     
Sbjct: 720  MKRLSKLCLGGTAVEKLPSSIEHLMSESLVELDLKGIFMREQPYSFFLKLQNRIVSSFGL 779

Query: 125  --RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
              R+S      +L SL    SLT L+L+DC L EG IP+DIG+L SL+ L L  NNFV+L
Sbjct: 780  FPRKSPHPLVPLLASLKHFSSLTTLNLNDCNLCEGEIPNDIGSLSSLERLELRGNNFVSL 839

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGALKLRKSSCTII 241
            P SI+ LF L+ + +++CKRLQ LP LP +   +V+ + C SL  L     L + S   +
Sbjct: 840  PVSIHLLFKLQGIDVQNCKRLQQLPDLPVSRSLQVKSDNCTSLQVLPDPPDLCRLSYFSL 899

Query: 242  DFVDSLKLLGKNGLA---ISMLREFLEVVSAPS--------------------------H 272
            + V+ L  +G    +    S+L+  LEV+S                              
Sbjct: 900  NCVNCLSTVGNQDASYFLYSVLKRLLEVLSLSLSLSLSLSLSQWLCDMMVHMQETPRSFR 959

Query: 273  KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
            +F  V+PGSEIP+WF  Q+ G S+T   PS  CN N+ +G+A C +F    + + +    
Sbjct: 960  RFRFVIPGSEIPEWFDNQSVGDSVTEKLPSGACN-NKWIGFAVCALFVPQDNPSAVPEDP 1018

Query: 333  RYPHPAHVLHCSMDEKFGHRG----------SDHLWLLYLPRQSYYCNVKWHFESNHFRL 382
                    + C  +      G          SDHL+LL  P      +  W    N  + 
Sbjct: 1019 GLVPDTCEIWCRWNSDGISSGGHGFPVKQFVSDHLFLLVFPSPFRNPDYTW----NEVKF 1074

Query: 383  SFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVG 442
             F   R      G+ T +KVK+CG    Y H+ EE      Q ++ +S +L E   D   
Sbjct: 1075 FFKVTR----AVGNNTCIKVKKCGVRALYEHDTEELISKMNQ-SKGSSISLYEEAMDEQE 1129

Query: 443  SNMAVAK----ANGSGCCDD 458
              M  AK     +GSG  DD
Sbjct: 1130 GAMVKAKQEAATSGSGVSDD 1149


>gi|399920222|gb|AFP55569.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1134

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/483 (31%), Positives = 234/483 (48%), Gaps = 35/483 (7%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 655  LEKLVLEGCTNLVKIHPSITLLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKL 713

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            + + E VGQ ++L +L I G+A+   PSS   L K+L  L   G        S +L   +
Sbjct: 714  KMIPEFVGQTKTLSKLCIGGSAVENLPSSFERLSKSLVELDLNGIVIREQPYSLFLKQNL 773

Query: 122  NLM------RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
             +       R+S      +L SL    SLT+L L+DC L EG IP+DIG L SL+ L L 
Sbjct: 774  RVSFFGLFPRKSPCPLTPLLASLKHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQLR 833

Query: 176  KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGALKLR 234
             NNFV LPASI+ L  L+++ +E+CKRLQ LP+LP   E +V  + C SL        L 
Sbjct: 834  GNNFVNLPASIHLLSKLKRINVENCKRLQQLPELPATDELRVVTDNCTSLQVFPDPPNLS 893

Query: 235  KSSCTIIDFVDSLKLLGKNGLA---ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
            +     +  ++    +G  G      S L++ LE      + F +V+PGSEIP+WF  Q+
Sbjct: 894  RCPEFWLSGINCFSAVGNQGFRYFLYSRLKQLLEETPWSLYYFRLVIPGSEIPEWFNNQS 953

Query: 292  EGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGH 351
             G S+    PSY CN ++ +G A C +  VP+ +       R+  P   + C  ++    
Sbjct: 954  VGDSVIEKLPSYACN-SKWIGVALCFLI-VPQDNPSAVPEVRHLDPFTRVFCCWNKNCSG 1011

Query: 352  RG----------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLK 401
             G          SDHL    LP+  +             +  F+ ++      G+  GL+
Sbjct: 1012 HGRLVTTVKQIVSDHLLFAVLPKFIWKPQNCLEDTCTEIKFVFVVDQ----TVGNSRGLQ 1067

Query: 402  VKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHD-----FVGSNMAVAKANGSGCC 456
            VK+CG    Y H+ EE      Q ++ +S +L E   D      V +    + +   G  
Sbjct: 1068 VKKCGARILYEHDTEELISKMNQ-SKSSSISLYEEAMDEQEGAMVKATQEASTSRSGGSD 1126

Query: 457  DDY 459
            D+Y
Sbjct: 1127 DEY 1129


>gi|225448053|ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 157/437 (35%), Positives = 230/437 (52%), Gaps = 59/437 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+EL LD T ++E+P SIE L+GLV L LK CK L  LP +I  L SL+TL L GC 
Sbjct: 886  MESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCS 945

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + +G ++ L +L+ +G+ I+  P+SI L+ NL+ LS  GC G  S +       
Sbjct: 946  ELKKLPDDMGSLQCLVKLESNGSGIQEVPTSITLLTNLQVLSLTGCKGGESKSR-----N 1000

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            + L  RSS      L SL+ L SL +L+LSDC L EGA+PSD+ +L  L+ L LS N+F+
Sbjct: 1001 LALSLRSSPTEGFRLSSLTALYSLKELNLSDCNLLEGALPSDLSSLSWLERLDLSINSFI 1060

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT---LLGALKLRKSS 237
            T+P S++ L  LE+L LE CK LQSLP+LP ++ ++  N C SL     L     LRK  
Sbjct: 1061 TVP-SLSRLPQLERLILEHCKSLQSLPELPSSIIELLANDCTSLENISYLSSGFVLRKFC 1119

Query: 238  CTIIDFVDSLKLLGKNG--------LAI---SMLREFLEVVSAPSHK-------FSIVVP 279
                +F +  +L+            LAI   + + +F++ +   S +       +  VVP
Sbjct: 1120 DFNFEFCNCFRLMENEQSDTLEAILLAIRRFASVTKFMDPMDYSSLRTFASRIPYDAVVP 1179

Query: 280  GSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAH 339
            GS IP+WF  Q+ G S+TV  P +     +++G A C VFH P  S G  +F R      
Sbjct: 1180 GSSIPEWFTDQSVGCSVTVELPPHWYT-TRLIGLAVCAVFH-PNISKG--KFGRSA---- 1231

Query: 340  VLHCSMDEKFG----------HRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDERE 389
              + SM+E  G             ++H+W  Y   +S +  V +    +H  +SF +   
Sbjct: 1232 --YFSMNESVGFSIDNTASMHFSKAEHIWFGY---RSLF-GVVFSRSIDHLEVSFSESIR 1285

Query: 390  KHCPAGSGTGLKVKRCG 406
                     G  VK+CG
Sbjct: 1286 --------AGEVVKKCG 1294



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 6/216 (2%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L+  T + ++  SI  L  L+ L L+GCKNL    S+I+ ++SL+ LNL GC K + 
Sbjct: 678 RIILVGCTSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSIH-MESLQILNLAGCSKLKK 736

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF-PINL 123
             E  G + +L EL + GTAI+  P SI  +  L  L+   C    S  SC      +  
Sbjct: 737 FPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSCIFKLKSLKT 796

Query: 124 MRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
           +  S+ L    LP +   + SL +L L D GL E  +PS I +L+ L  L +       +
Sbjct: 797 LILSNCLRLKKLPEIRENMESLKELFLDDTGLRE--LPSSIEHLNELVLLQMKNCKKLAS 854

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           LP SI  L +L+ L + +C RL+ LP++  N+E ++
Sbjct: 855 LPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLK 890



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 107/210 (50%), Gaps = 5/210 (2%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T IK +PLSIE L+GL  L L  CK+L  LPS I  LKSLKTL L  C 
Sbjct: 744 MYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSCIFKLKSLKTLILSNCL 803

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS-SASCYLPF 119
           + + L E    +ESL+EL +  T +R  PSSI  +  L  L  + C    S   S +   
Sbjct: 804 RLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLLQMKNCKKLASLPESIFKLK 863

Query: 120 PINLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEGAIPSDIGNLHS-LKTLYLSKN 177
            +  +  S+ L    LP +   + SL +L L D GL E  +PS I +L+  +     +  
Sbjct: 864 SLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLRE--LPSSIEHLNGLVLLKLKNCK 921

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
              +LP SI  L +L+ L L  C  L+ LP
Sbjct: 922 KLASLPESICKLTSLQTLTLSGCSELKKLP 951



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 27/204 (13%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           + L   ++L++ P + +   +L+ + L+GC     +  ++G ++ L  LD+ G       
Sbjct: 656 IKLSHSQHLIKTP-DFSGAPNLRRIILVGCTSLVKVHPSIGALKKLIFLDLEGCKNLKSF 714

Query: 90  SSIFLMKNLKTLSFRGCNG----PPSSASCY--------------LPFPINLMRRSSDLG 131
           SS   M++L+ L+  GC+     P    + Y              LP  I  +   + L 
Sbjct: 715 SSSIHMESLQILNLAGCSKLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLN 774

Query: 132 ALMLPSLSG-------LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                SL         L SL  L LS+C L    +P    N+ SLK L+L       LP+
Sbjct: 775 LGECKSLESLPSCIFKLKSLKTLILSNC-LRLKKLPEIRENMESLKELFLDDTGLRELPS 833

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQ 208
           SI  L  L  L++++CK+L SLP+
Sbjct: 834 SIEHLNELVLLQMKNCKKLASLPE 857


>gi|224116230|ref|XP_002331993.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832117|gb|EEE70594.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1308

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 167/319 (52%), Gaps = 79/319 (24%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 721 MNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 780

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + + E +G+VESL+E D SGT+IR  P+SIF++KNLK LS  GC              
Sbjct: 781 ELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDGCK------------- 827

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                       ++LPSLSGL SL  L L  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 828 ----------RIVVLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFV 877

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN LF LE L LEDC  L+SLP++P  V+                          
Sbjct: 878 SLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQ-------------------------- 911

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTR 300
                        GL            S P   FSI VPG+EI  WF +Q+EGSSI+V  
Sbjct: 912 ------------TGL------------SNPRPGFSIAVPGNEILGWFNHQSEGSSISVQV 947

Query: 301 PSYLCNMNQVVGYAACRVF 319
           PS+       +G+ AC  F
Sbjct: 948 PSW------SMGFVACVAF 960


>gi|399920215|gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 156/497 (31%), Positives = 235/497 (47%), Gaps = 65/497 (13%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ E+  S  LL  L  L L+ CK++  LPS ++ ++ L+T ++ GC K 
Sbjct: 601  LEKLVLEGCTNLVEVHQSTGLLQKLRILNLRNCKSIKSLPSEVH-MEFLETFDVSGCSKL 659

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP---- 118
            + + E VGQ++ L  L +SGTA+   PS   L ++L  L   G        S +L     
Sbjct: 660  KMIPEFVGQMKRLSRLSLSGTAVEKLPSIEHLSESLVELDLSGIVIREQPYSLFLKQNLI 719

Query: 119  ------FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
                  FP    R+S      +L SL    SLT L L+DC L EG +P+DIG+L SL+ L
Sbjct: 720  VSSFGLFP----RKSPHPLIPLLASLKHFSSLTTLKLNDCNLCEGELPNDIGSLSSLEWL 775

Query: 173  YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
            YL  NNF TLPASI+ L  L  + +E+CKRLQ LP+L  N    R + C SL        
Sbjct: 776  YLGGNNFSTLPASIHLLSKLRYINVENCKRLQQLPELSANDVLSRTDNCTSLQLFPDPPD 835

Query: 233  L-RKSSCTIIDFVDSLKLLGKNGLA---ISMLREFLEVV---------------SAPSHK 273
            L R ++   ++ V+ L ++G    +    S+L+ ++E+                  P   
Sbjct: 836  LCRITTSFWLNCVNCLSMVGNQDASYFLYSVLKRWIEIQVLTRCDMTVHMQETHRRPLES 895

Query: 274  FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR 333
              +V+PGSEIP+WF  Q+ G  +T   PS  C  ++++G+A C +     + + +     
Sbjct: 896  LKVVIPGSEIPEWFNNQSVGDRVTEKLPSDEC-YSKLIGFAVCALIVPQDNPSAVPEESN 954

Query: 334  YPHPAHVLHCSMDEKFGHRG---------SDHLWLLYLP---RQSYYCNVKWHFESNHFR 381
             P   H++    +  F             SDHL+LL L    R+   C          F 
Sbjct: 955  LPDTCHIVRLWNNYGFDIASVGIPVKQFVSDHLYLLVLLNPFRKPENC--------LEFE 1006

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFV 441
             SF   R      G+  G+KVK+CG    Y H+ EE      Q ++ +S +L E   D  
Sbjct: 1007 FSFEIRR----AVGNNRGMKVKKCGVRALYEHDTEELISKMNQ-SKSSSISLYEEAMD-- 1059

Query: 442  GSNMAVAKANGSGCCDD 458
                  A  +GSG  DD
Sbjct: 1060 --EQKEAATSGSGGSDD 1074


>gi|111146892|gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/321 (38%), Positives = 178/321 (55%), Gaps = 13/321 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L  L L+ T I ++P S+  L GL  L  K CKNLV LP  I+ L+SL  LN+ GC 
Sbjct: 719  MEHLSVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCS 778

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA--SCYLP 118
            K  +L E + +++ LEELD S TAI+  PS +F ++NL+ +S  GC GP S +  S +LP
Sbjct: 779  KLSSLPEGLKEIKCLEELDASETAIQELPSFVFYLENLRDISVAGCKGPVSKSVNSFFLP 838

Query: 119  FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            F      + + +G  + PS   L SL +++LS C L E + P D  +L SL  L L+ NN
Sbjct: 839  FKRLFGNQQTSIGFRLPPSALSLPSLKRINLSYCNLSEESFPGDFCSLSSLMILNLTGNN 898

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL-VTLLGALKLRKSS 237
            FV+LP+ I+ L  LE L L  CK+LQ+LP+LP N+  +  + C S  ++     K     
Sbjct: 899  FVSLPSCISKLAKLEHLILNSCKKLQTLPKLPSNMRGLDASNCTSFEISKFNPSK----P 954

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREF--LEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSS 295
            C++  F    K      L  S+L +   L+ +  P  +F +++ GSEIP WF      S 
Sbjct: 955  CSL--FASPAKWHFPKELE-SVLEKIQKLQKLHLPKERFGMLLTGSEIPPWFSRSKTVSF 1011

Query: 296  ITVTRPSYLCNMNQVVGYAAC 316
              ++ P   C MN+ VG+A C
Sbjct: 1012 AKISVPDD-CPMNEWVGFALC 1031



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 24/190 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     LV L  + CK L  LP  +  + SL  LNL GC +F+ L E    
Sbjct: 660 TSLTEVHPSLVRHKKLVWLNFEDCKKLKTLPRKME-MSSLNDLNLSGCSEFKCLPEFAES 718

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +E L  L + GTAI   P+S+  +  L  L  + C     +  C LP  I+ +R      
Sbjct: 719 MEHLSVLCLEGTAITKLPTSLGCLIGLSHLDTKNCK----NLVC-LPDTIHKLR------ 767

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           +L++ ++SG   L+ L            P  +  +  L+ L  S+     LP+ +  L N
Sbjct: 768 SLIVLNVSGCSKLSSL------------PEGLKEIKCLEELDASETAIQELPSFVFYLEN 815

Query: 192 LEKLKLEDCK 201
           L  + +  CK
Sbjct: 816 LRDISVAGCK 825



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 11/179 (6%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E L      +E L  +++S +           + NL++L  +GC          +   
Sbjct: 614 KIEQLWHGTELLEKLRFINLSFSKNLKQSPDFVGVPNLESLVLKGCTSLTEVHPSLVRHK 673

Query: 121 INLMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             +     D   L  LP    + SL  L+LS C   +  +P    ++  L  L L     
Sbjct: 674 KLVWLNFEDCKKLKTLPRKMEMSSLNDLNLSGCSEFK-CLPEFAESMEHLSVLCLEGTAI 732

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR------VNGCASLVTLLGALK 232
             LP S+ CL  L  L  ++CK L  LP     + K+R      V+GC+ L +L   LK
Sbjct: 733 TKLPTSLGCLIGLSHLDTKNCKNLVCLPD---TIHKLRSLIVLNVSGCSKLSSLPEGLK 788


>gi|147787212|emb|CAN75767.1| hypothetical protein VITISV_032562 [Vitis vinifera]
          Length = 600

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/226 (49%), Positives = 146/226 (64%), Gaps = 8/226 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T IK++P SI+ LSGLV L L+ CK+L  LP +I  LKSL+TL L GC 
Sbjct: 349 MGSLLELFLYGTAIKKLPSSIQHLSGLVLLNLRECKSLAILPHSIRKLKSLQTLILSGCS 408

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP-- 118
           K +NL + +G ++ LE+L+ +GTAI+  P SI L++NL+ LSF GC G  S+    LP  
Sbjct: 409 KLDNLPKGLGSLQGLEKLEAAGTAIKELPPSISLLENLEVLSFEGCKGLESNPRNSLPSF 468

Query: 119 --FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              P  + R         L S  GL SL KL+LSDC + EGAIP+D  +L SL+ L LS+
Sbjct: 469 QLLPAEIGRSR----GFQLHSFFGLRSLRKLNLSDCNILEGAIPNDFSSLCSLEYLDLSR 524

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           NNFVTLPAS+N L  L+ L+L  CKRLQSLP+LP ++E++    C 
Sbjct: 525 NNFVTLPASLNQLSQLKGLRLGYCKRLQSLPELPSSIEEIDAPDCT 570



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 82/192 (42%), Gaps = 31/192 (16%)

Query: 59  CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
           C K + L E +  + SL EL + GTAI+  PSSI  +  L  L+ R C            
Sbjct: 336 CLKLKELPEVLENMGSLLELFLYGTAIKKLPSSIQHLSGLVLLNLRECKSL--------- 386

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
                        A++  S+  L SL  L LS C   +  +P  +G+L  L+ L  +   
Sbjct: 387 -------------AILPHSIRKLKSLQTLILSGCSKLDN-LPKGLGSLQGLEKLEAAGTA 432

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQ--------LPPNVEKVRVNGCASLVTLLGA 230
              LP SI+ L NLE L  E CK L+S P+        LP  + + R     S   L   
Sbjct: 433 IKELPPSISLLENLEVLSFEGCKGLESNPRNSLPSFQLLPAEIGRSRGFQLHSFFGLRSL 492

Query: 231 LKLRKSSCTIID 242
            KL  S C I++
Sbjct: 493 RKLNLSDCNILE 504


>gi|37781360|gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 180/324 (55%), Gaps = 17/324 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+  S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 553 MNCLAELYLGATALSELSASVENLSGVGVINLCYCKHLESLPSSIFRLKCLKTLDVSGCS 612

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEE   + TAI+  PSSI L+KNLK LS RGCN         L   
Sbjct: 613 KLKNLPDDLGLLVGLEEFHCTHTAIQTIPSSISLLKNLKHLSLRGCNA--------LSSQ 664

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL  L L  NNF 
Sbjct: 665 VSSSSHGQKSVGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLAGLILDGNNFS 724

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
            +P ASI+ L  LE L L  C+RL+SLP+LPP+++++  + C SL+++    K   S   
Sbjct: 725 NIPAASISRLTRLEILALAGCRRLESLPELPPSIKEIYADECTSLMSIDQLTKY--SMLH 782

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH---KFSIVVPGSEIPKWFMYQNEGS-S 295
            + F    +L+  N    SM+   L+ +    +    FS+ +PG EIP+WF Y+N G+ S
Sbjct: 783 EVSFTKCHQLV-TNKQHASMVDSLLKQMHKGLYLNGSFSMYIPGVEIPEWFTYKNSGTES 841

Query: 296 ITVTRPSYLCNMNQVVGYAACRVF 319
           I+V  P          G A C VF
Sbjct: 842 ISVALPKNWYTPT-FRGIAICVVF 864


>gi|224130518|ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/312 (42%), Positives = 180/312 (57%), Gaps = 12/312 (3%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI +L GLV L LK C  L  LP+NI  LK+L+ LNL GCFK E L E +G V +LEELD
Sbjct: 668 SIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELD 727

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +  TAI   PS+  L K LK LSF GC GP +  S Y  F    + R+     LML SLS
Sbjct: 728 VGRTAITQLPSTFGLWKKLKVLSFDGCKGP-APKSWYSLFSFRSLPRNPCPITLMLSSLS 786

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            L SLTKL+LS+C L EG +P D+    SL+ L L  NNFV +P+SI+ L  L+ L+L +
Sbjct: 787 TLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGN 846

Query: 200 CKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL-KLRKSSCTIIDFVDSLKLLGKNG---L 255
           CK+LQSLP LP  +E + V+GCASL TL     +  +S    + F++  +L    G   +
Sbjct: 847 CKKLQSLPDLPSRLEYLGVDGCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQGNISM 906

Query: 256 AISMLREFLEVVSAPSHK------FSIVVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMN 308
            ++ L+ +L  +    H+      F    PGSEIP WF +++ G S+T+   P    + +
Sbjct: 907 GLTWLKYYLHFLLESGHQGHPASWFFTCFPGSEIPSWFHHKSVGHSLTIRLLPYEHWSSS 966

Query: 309 QVVGYAACRVFH 320
           + +G A C  F 
Sbjct: 967 KWMGLAVCAFFE 978


>gi|37781280|gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/324 (37%), Positives = 182/324 (56%), Gaps = 17/324 (5%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL EL L  T +  +P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 719  MNCLAELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K +NL + +G +  LE+L  + TAI   PSS+ L+KNLK LS RGCN         L   
Sbjct: 779  KLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNA--------LSSQ 830

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            ++          +   +LSGL SL +LDLSDC + +G I  ++G L SLK L L  NNF 
Sbjct: 831  VSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCDISDGGILRNLGFLSSLKVLLLDGNNFS 890

Query: 181  TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
             +P ASI+ L  L+ L L  C RL+SLP+LPP++  +  + C SL+++    K      +
Sbjct: 891  NIPAASISRLTRLKSLALRGCGRLESLPELPPSITGIYAHDCTSLMSIDQLTKY--PMLS 948

Query: 240  IIDFVDSLKLLGK---NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS-S 295
             + F +  +L+       +  S+L++ LE +   + +F + VPG EIP+WF Y++ G+ S
Sbjct: 949  DVSFRNCHQLVKNKQHTSMVDSLLKQMLEALYM-NVRFGLYVPGMEIPEWFTYKSWGTQS 1007

Query: 296  ITVTRPSYLCNMNQVVGYAACRVF 319
            ++V  P+         G+  C +F
Sbjct: 1008 MSVVLPTNWFTPT-FRGFTVCVLF 1030


>gi|357507435|ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
 gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
 gi|355499021|gb|AES80224.1| TMV resistance protein N [Medicago truncatula]
          Length = 1134

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 14/318 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L  L L+ TDI+++PLS+  L GL  L LK CK+LV LP  I+ L SL TL++ GC 
Sbjct: 720  MENLSMLALEGTDIRKLPLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLNSLITLDISGCS 779

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP-PSSASCYLPF 119
            K   L + + +++ LEEL  + TAI   PSSIF + +LK LSF GC GP  +S + +LPF
Sbjct: 780  KLCRLPDGLKEIKCLEELHANDTAIDELPSSIFYLDSLKVLSFAGCQGPSTTSMNWFLPF 839

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             +    + +  G  +  S+ GL SL  L+LS C L E + P+   +L SLK+L L+ NNF
Sbjct: 840  NLMFGSQPASNGFRLPSSVMGLPSLEYLNLSYCNLSEESFPNYFHHLSSLKSLDLTGNNF 899

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-LGALKLRKSSC 238
            V +P+SI+ L  L  L L  C++LQ LP+LP  + ++  + C SL T+     KL    C
Sbjct: 900  VIIPSSISKLSRLRFLCLNWCQKLQLLPELPLTMTQLNASNCDSLDTMKFNPAKL----C 955

Query: 239  TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
            ++  F    KL       +  L +  E    P+ +F +++PG EIP WF+ Q   S   V
Sbjct: 956  SL--FASPRKL-----SYVQELYKRFEDRCLPTTRFDMLIPGDEIPSWFVPQRSVSWAKV 1008

Query: 299  TRPSYLCNMNQVVGYAAC 316
              P+     ++ VG+A C
Sbjct: 1009 HIPNNF-PQDEWVGFALC 1025


>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
 gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 152/448 (33%), Positives = 207/448 (46%), Gaps = 78/448 (17%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L LD+  + E+P +I  L+GL  L L+ CKN+  LP   + LKSLK LNL GC 
Sbjct: 763  MTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCS 822

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
            KF  L + + + E+LE L++S TAIR  PSSI  +KNL +L F GC G   +S S  LP 
Sbjct: 823  KFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSESSLLP- 881

Query: 120  PINLMRRSSDLGA------LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                + R    G       L+LPS SGL SL KLDLS C L + +IP D+G L SL TL 
Sbjct: 882  ----LGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLD 937

Query: 174  LSKNNFVTL-PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
            +S NNFV L    I+ L  LE+L L  C+ LQSLP LPPNV  V  + C+SL  L     
Sbjct: 938  ISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVNTSDCSSLKPL----- 992

Query: 233  LRKSSCTIIDFVDSLKLLGK-NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
                        D  ++ G     A   L++      A   K  +V PG+EIP  F YQN
Sbjct: 993  -----------SDPQEIWGHLASFAFDKLQD------ANQIKTLLVGPGNEIPSTFFYQN 1035

Query: 292  E-GSSITVTRPSYLCNMNQV---VGYAACR--------------------VFHVPKHSTG 327
                 I   + +Y+   + V   +  A  R                    V   P     
Sbjct: 1036 YFDRDIQYLKDNYIWADSTVSISINMAQLRQRYDRSEWWGLLVSLVIEDVVSSTPSQDYR 1095

Query: 328  IRRFYRYPHPAHVLHCSMDEKFGH--------RGSDHLWLLYLPRQSYYCNVKWHFESNH 379
            +    + P   H+L     +   H            HL +LY+P  + +   +W +  + 
Sbjct: 1096 VGWISKVPATNHILRQLFQKLLEHGFISGVPNSKHPHLLVLYIPVPAAF---RWSYVQDK 1152

Query: 380  FRLSFMDEREKHCPAGSGTGLKVKRCGF 407
            F+L F     K       + L +K+CG+
Sbjct: 1153 FQLIFFSSSLK-------SKLVIKKCGW 1173



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 28/184 (15%)

Query: 71  QVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---------NGPPSSASCYLPFPI 121
           Q + L +LD+  + I+       L+ NLKT++ +            G P+     L   I
Sbjct: 645 QSDELVDLDMCHSKIKHLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCI 704

Query: 122 NLMRRSSDLGALM------------LPSLSG---LGSLTKLDLSDCGLGEGAIPSDIGNL 166
           NL+   + LG L             L SL G   + SL +L L+ C      +P    ++
Sbjct: 705 NLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLEMNSLKRLILTGCT-SVRKLPDFGESM 763

Query: 167 HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCAS 223
            +L TL L +     LP +I  L  L  L L DCK + SLP       +++++ ++GC+ 
Sbjct: 764 TNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSK 823

Query: 224 LVTL 227
              L
Sbjct: 824 FSKL 827


>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 152/448 (33%), Positives = 207/448 (46%), Gaps = 78/448 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L LD+  + E+P +I  L+GL  L L+ CKN+  LP   + LKSLK LNL GC 
Sbjct: 580 MTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCS 639

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
           KF  L + + + E+LE L++S TAIR  PSSI  +KNL +L F GC G   +S S  LP 
Sbjct: 640 KFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSESSLLP- 698

Query: 120 PINLMRRSSDLGA------LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
               + R    G       L+LPS SGL SL KLDLS C L + +IP D+G L SL TL 
Sbjct: 699 ----LGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLD 754

Query: 174 LSKNNFVTL-PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
           +S NNFV L    I+ L  LE+L L  C+ LQSLP LPPNV  V  + C+SL  L     
Sbjct: 755 ISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVNTSDCSSLKPL----- 809

Query: 233 LRKSSCTIIDFVDSLKLLGK-NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
                       D  ++ G     A   L++      A   K  +V PG+EIP  F YQN
Sbjct: 810 -----------SDPQEIWGHLASFAFDKLQD------ANQIKTLLVGPGNEIPSTFFYQN 852

Query: 292 E-GSSITVTRPSYLCNMNQV---VGYAACR--------------------VFHVPKHSTG 327
                I   + +Y+   + V   +  A  R                    V   P     
Sbjct: 853 YFDRDIQYLKDNYIWADSTVSISINMAQLRQRYDRSEWWGLLVSLVIEDVVSSTPSQDYR 912

Query: 328 IRRFYRYPHPAHVLHCSMDEKFGH--------RGSDHLWLLYLPRQSYYCNVKWHFESNH 379
           +    + P   H+L     +   H            HL +LY+P  + +   +W +  + 
Sbjct: 913 VGWISKVPATNHILRQLFQKLLEHGFISGVPNSKHPHLLVLYIPVPAAF---RWSYVQDK 969

Query: 380 FRLSFMDEREKHCPAGSGTGLKVKRCGF 407
           F+L F     K       + L +K+CG+
Sbjct: 970 FQLIFFSSSLK-------SKLVIKKCGW 990



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 28/184 (15%)

Query: 71  QVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---------NGPPSSASCYLPFPI 121
           Q + L +LD+  + I+       L+ NLKT++ +            G P+     L   I
Sbjct: 462 QSDELVDLDMCHSKIKHLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCI 521

Query: 122 NLMRRSSDLGALM------------LPSLSG---LGSLTKLDLSDCGLGEGAIPSDIGNL 166
           NL+   + LG L             L SL G   + SL +L L+ C      +P    ++
Sbjct: 522 NLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLEMNSLKRLILTGCT-SVRKLPDFGESM 580

Query: 167 HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCAS 223
            +L TL L +     LP +I  L  L  L L DCK + SLP       +++++ ++GC+ 
Sbjct: 581 TNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSK 640

Query: 224 LVTL 227
              L
Sbjct: 641 FSKL 644


>gi|399920226|gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
          Length = 2242

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 219/431 (50%), Gaps = 39/431 (9%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T++ E+  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K + + E VGQ
Sbjct: 1811 TNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSAVN-MEFLETFDVSGCSKLKKIPEFVGQ 1869

Query: 72   VESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGCNGPPSSASCYLPFPINLM------ 124
             + L +L + GTA+   PSSI  L ++L  L   G        S ++   + +       
Sbjct: 1870 TKRLSKLYLDGTAVEKLPSSIEHLSESLVELDLSGIVKRDQPFSLFVKQNLRVSSFGLFP 1929

Query: 125  RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
            R+S      +L SL    SLTKL+L+DC L EG IP+DIG L SL+ L L  NNFV+LPA
Sbjct: 1930 RKSPHPLIPVLASLKHFSSLTKLNLNDCNLCEGEIPNDIGTLSSLEILKLRGNNFVSLPA 1989

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGALKLRKSSCTIIDF 243
            SI+ L  L ++ +E+CKRLQ LP+LP +    V  + C SL        L + S   +  
Sbjct: 1990 SIHLLSKLTQIDVENCKRLQQLPELPVSRSLWVTTDNCTSLQVFPDPPDLCRLSAFWVSC 2049

Query: 244  VDSLKLLGKNGLA---ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTR 300
            V+   ++G    +    S+L+  LE        +  +VPGSEIP+WF  Q+ G  +T   
Sbjct: 2050 VNCSSMVGNQDASYFLYSVLKRLLEETLCSFRYYLFLVPGSEIPEWFNNQSVGDRVTEKL 2109

Query: 301  PSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP-----------HPAHVLHCSMDEKF 349
            PS  CN ++ +G+A C +  VP+ +     F   P           H  +  + S+ +KF
Sbjct: 2110 PSDACN-SKWIGFAVCALI-VPQDNPSA--FPENPLLDPDTCRIGCHWNNGFY-SLGQKF 2164

Query: 350  GHRG--SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
              R   SDHLWL  L  +S++  ++   E N     F+ E  +    GS   +KVK+CG 
Sbjct: 2165 RVRQFVSDHLWLFVL--RSHFWKLEKRLEVN-----FVFEVTR--AVGSNICIKVKKCGV 2215

Query: 408  HPGYMHEVEEF 418
               Y H+ EE 
Sbjct: 2216 PALYEHDKEEL 2226


>gi|359493489|ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 164/442 (37%), Positives = 230/442 (52%), Gaps = 55/442 (12%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            LR ++L+  T + ++  SI  L  L+ L L+GC  L  LP +I  L SL+TL L GC K 
Sbjct: 646  LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLENLPQSICELISLQTLTLSGCSKL 705

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            + L + +G+++ L EL++ GT I+   SSI L+ NL+ LS  GC G  S +   + F   
Sbjct: 706  KKLPDDLGRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISF--- 762

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
               RSS    L LP LSGL SL  L+LSDC L EGA+PSD+ +L SL+ LYL KN+F+TL
Sbjct: 763  ---RSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITL 819

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----------LGALK 232
            PAS++ L  L  L LE CK L+SLP+LP ++E +  + C SL TL          LG L+
Sbjct: 820  PASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGDLR 879

Query: 233  LRKSSCTII------DFVDSLKLLGKNGLAISMLREFLEVVSAP--SHKFSIVVPGSEIP 284
               ++C  +      D V++  +L    LA SM +  LE        H +  +VPGS IP
Sbjct: 880  FNFTNCFRLGENQGSDIVET--ILEGTQLASSMAK-LLEPDERGLLQHGYQALVPGSRIP 936

Query: 285  KWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCS 344
            KWF +Q+ GS + V  P +  N  + +G AAC VF+      G    YR   P   L C 
Sbjct: 937  KWFTHQSVGSKVIVELPPHWYN-TKWMGLAACVVFNFKGAVDG----YRGTFP---LACF 988

Query: 345  MDEKFG----HRG--------SDHLWLLYLPRQSYYCNV-KWHFE-SNHFRLSFMDEREK 390
            ++ ++     H          SDH W  Y+ R         W  E S++   SF+     
Sbjct: 989  LNGRYATLSDHNSLWTSSIIESDHTWFAYISRAELEARYPPWTGELSDYMLASFL----F 1044

Query: 391  HCPAGSGTGL-KVKRCGFHPGY 411
              P G+ T   +VK+CG    Y
Sbjct: 1045 LVPEGAVTSHGEVKKCGVRLVY 1066



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 20/83 (24%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK-------NLVRLPSN--------- 44
           ++CL EL +D T IKE+  SI LL+ L  L+L GCK       NL+   S+         
Sbjct: 715 LQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPF 774

Query: 45  INSLKSLKTLNLLGCFKFENLLE 67
           ++ L SLK+LNL  C    NLLE
Sbjct: 775 LSGLYSLKSLNLSDC----NLLE 793


>gi|37781356|gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 183/322 (56%), Gaps = 13/322 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL EL LD T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 719  MNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K +NL + +G +  LE+L  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 779  KLKNLPDDLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNA--------LSSQ 830

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 831  VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFS 890

Query: 181  TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-RKSSC 238
             +P ASI+ L  L+ LKL  C RL+SLP+LPP+++ +  N C SL+++    K    S  
Sbjct: 891  NIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKGIYANECTSLMSIDQLTKYPMLSDA 950

Query: 239  TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS-SIT 297
            +  +    +K      +  S+L++ LE +   + +F   VPG EIP+WF Y++ G+ S++
Sbjct: 951  SFRNCRQLVKNKQHTSMVDSLLKQMLEALYM-NVRFGFYVPGMEIPEWFTYKSWGTQSMS 1009

Query: 298  VTRPSYLCNMNQVVGYAACRVF 319
            V  P+         G+  C VF
Sbjct: 1010 VALPTNWLTPT-FRGFTVCVVF 1030


>gi|147858727|emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 167/444 (37%), Positives = 233/444 (52%), Gaps = 54/444 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +E L  + L+ T I+E+P SI  L+ LV L L+ C+ L  LP +I  L SL+TL L GC 
Sbjct: 729  LEDLSGISLEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCS 788

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K + L + +G+++ L EL++ GT I+   SSI L+ NL+ LS  GC G  S +   + F 
Sbjct: 789  KLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISF- 847

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 RSS    L LP LSGL SL  L+LSDC L EGA+PSD+ +L SL+ LYL KN+F+
Sbjct: 848  -----RSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFI 902

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----------LGA 230
            TLPAS++ L  L  L LE CK L+SLP+LP ++E +  + C SL TL          LG 
Sbjct: 903  TLPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGD 962

Query: 231  LKLRKSSCTII------DFVDSLKLLGKNGLAISMLREFLEVVSAP--SHKFSIVVPGSE 282
            L+   ++C  +      D V++  +L    LA SM +  LE        H +  +VPGS 
Sbjct: 963  LRFNFTNCFRLGENQGSDIVET--ILEGTQLASSMAK-LLEPDERGLLQHGYQALVPGSR 1019

Query: 283  IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLH 342
            IPKWF +Q+ GS + V  P +  N  + +G AAC VF+      G    YR   P   L 
Sbjct: 1020 IPKWFTHQSVGSKVIVELPPHWYN-TKWMGLAACVVFNFKGAVDG----YRGTFP---LA 1071

Query: 343  CSMDEKFG----HRG--------SDHLWLLYLPRQSYYCNV-KWHFE-SNHFRLSFMDER 388
            C ++ ++     H          SDH W  Y+ R         W  E S++   SF+   
Sbjct: 1072 CFLNGRYATLSDHNSLWTSSIIESDHTWFAYISRAELEARYPPWTGELSDYMLASFL--- 1128

Query: 389  EKHCPAGSGTGL-KVKRCGFHPGY 411
                P G+ T   +VK+CG    Y
Sbjct: 1129 -FLVPEGAVTSHGEVKKCGVRLVY 1151


>gi|359493496|ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 192/338 (56%), Gaps = 24/338 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +E L  + L+ T I+E+P SI  L+ LV L L+ CK L  LP +I  L SL+TL L GC 
Sbjct: 728  LEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCS 787

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K + L + +G+++ L EL + GT I+  PSSI L+ NL+ LS  GC G   S S  L F 
Sbjct: 788  KLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGW-ESKSWNLAFS 846

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                     L  L LP LSGL SL  L+LSDC L EGA+P D+ +L SL+ L LS+N+F+
Sbjct: 847  FG---SWPTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFI 903

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----------LG 229
            T+PA+++ L  L  L L  CK LQSLP+LP ++  +    C SL T             G
Sbjct: 904  TIPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYG 963

Query: 230  ALKLRKSSCTII---DFVDSLK--LLGKNGLAI--SMLREFL-EVVSAPSHKFSIVVPGS 281
             L+L  S+C  +   +  DS+K  LLG   LA     L+ FL   +  P + +  +VPGS
Sbjct: 964  GLRLEFSNCFRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDGPHNLYDAIVPGS 1023

Query: 282  EIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
             IP+WF+ Q+ GSS+TV  P +  N  +++G A C V 
Sbjct: 1024 RIPEWFVDQSTGSSVTVELPPHWYN-TKLMGMAVCAVI 1060


>gi|147862986|emb|CAN78790.1| hypothetical protein VITISV_027418 [Vitis vinifera]
          Length = 1617

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 182/345 (52%), Gaps = 27/345 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            MECL EL L+ T I E+P S+  L  LV L ++ CKNL  LPSNI SLK L TL L GC 
Sbjct: 1235 MECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKNLTILPSNIYSLKFLGTLVLSGCS 1294

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS--------- 111
              E   E +  +E L++L + G +I+  P SI  +K L++LS R C    S         
Sbjct: 1295 GLERFPEIMEVMECLQKLLLDGISIKELPPSIVHLKGLQSLSLRKCKNLKSLPNSICSLR 1354

Query: 112  ----------SASCYLPFPIN--LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAI 159
                      S    LP  +   L R +SD   L LP LSGL SL  LDLS C L + +I
Sbjct: 1355 SLETLIVSGCSKLSKLPEELGRLLHRENSDGIGLQLPYLSGLYSLKYLDLSGCNLTDRSI 1414

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
              ++G+L  L+ L LS+NN VT+P  +N L +L  L +  CKRL+ + +LPP+++ +   
Sbjct: 1415 NDNLGHLRFLEELNLSRNNLVTIPEEVNRLSHLRVLSVNQCKRLREISKLPPSIKLLDAG 1474

Query: 220  GCASL--VTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA---PSHKF 274
             C SL  +++L     +  S +      + KL     LA   +   LE +     P  ++
Sbjct: 1475 DCISLESLSVLSPQSPQYLSSSSRLHPVTFKLTNCFALAQDNVATILEKLHQNFLPEIEY 1534

Query: 275  SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            SIV+PGS IP+WF + + GSS+T+  P    N  + +G+A C V 
Sbjct: 1535 SIVLPGSTIPEWFQHPSIGSSVTIELPRNWHN-EEFLGFAXCCVL 1578



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 19/216 (8%)

Query: 3    CLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            CL  L+LD  T + E+   +  L  L  L +K CK L   PS I  L+SLK LNL GC K
Sbjct: 1166 CLELLILDGCTSLLEVHPPVTKLKRLTILNMKNCKMLHHFPS-ITGLESLKVLNLSGCSK 1224

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +   E  G +E L EL++ GTAI   P S+  +  L  L  + C          LP  I
Sbjct: 1225 LDKFPEIQGYMECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKN-----LTILPSNI 1279

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTK-LDLSDC-------GLGEGAIPSDIGNLHSLKTLY 173
              ++    LG L+L   SGL    + +++ +C       G+    +P  I +L  L++L 
Sbjct: 1280 YSLKF---LGTLVLSGCSGLERFPEIMEVMECLQKLLLDGISIKELPPSIVHLKGLQSLS 1336

Query: 174  LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            L K  N  +LP SI  L +LE L +  C +L  LP+
Sbjct: 1337 LRKCKNLKSLPNSICSLRSLETLIVSGCSKLSKLPE 1372


>gi|37781278|gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/424 (35%), Positives = 213/424 (50%), Gaps = 49/424 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L EL L  T + E+P S+E  SG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 719  MNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K +NL + +G +  +E+L  + TAI+  PSS+ L+KNLK LS  GCN   S  S      
Sbjct: 779  KLKNLPDDLGLLVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVS------ 832

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             +       +G     +LSGL SL KLDLSDC + +G I S++G L SLK L L  NNF 
Sbjct: 833  -SSSHGQKSMGINFFQNLSGLCSLIKLDLSDCNISDGGILSNLGLLPSLKVLILDGNNFS 891

Query: 181  TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
             +P ASI+ L  L+ L L  C  L+ LP+LPP+++ +  N   S   L+G  +L +    
Sbjct: 892  NIPAASISRLTRLKCLALHGCTSLEILPKLPPSIKGIYANESTS---LMGFDQLTEFPML 948

Query: 240  IIDFVDSLKLLGKNGLAISM----LREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS- 294
                +     L KN L  SM    L+E LE +   + +F + VPG EIP+WF Y+N G+ 
Sbjct: 949  SEVSLAKCHQLVKNKLHTSMADLLLKEMLEALYM-NFRFCLYVPGMEIPEWFTYKNWGTE 1007

Query: 295  SITVTRPSYLCNMNQVVGYAACRVF--HVPKHSTGIRRFYRYPHPAHVLH-CSMDEKFGH 351
            SI+V  P+         G+  C V    +P        F   P   H++H   +   FG 
Sbjct: 1008 SISVALPTNWFTPT-FRGFTVCVVLDKRIP--------FILGPFNIHIVHGLKISTSFGP 1058

Query: 352  RGSD------HLWLLYLPRQSYYCNVKWHFE-------SNHFRLSFM--DEREKHCPAGS 396
             GS+      +  + ++P  S+     W  E       +N F+L F   D  +K    G 
Sbjct: 1059 IGSENPGGLGNTLITHVPFGSH-----WQLEDDLDYSCNNAFQLEFSACDHYQKDMVKGL 1113

Query: 397  GTGL 400
            G  L
Sbjct: 1114 GVRL 1117


>gi|359493410|ref|XP_002279970.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1212

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 151/422 (35%), Positives = 201/422 (47%), Gaps = 78/422 (18%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+  L  L  L+ K CK L  LPS    LKSL TL L GC KFE   E  G +E L++L 
Sbjct: 753  SLRDLKNLNFLSFKNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFPENFGYLEMLKKLY 812

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
              GTA+R  PSS+  ++NL+ LSF GC GPP SAS   P      RRSS+    +L +LS
Sbjct: 813  ADGTALRELPSSLSSLRNLEILSFVGCKGPP-SASWLFP------RRSSNSTGFILHNLS 865

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            GL SL KLDLSDC L +    S +  L SLK LYL +NNFVTLP +++ L  LE+ +L +
Sbjct: 866  GLCSLRKLDLSDCNLSDETNLSCLVYLSSLKDLYLCENNFVTLP-NLSRLSRLERFRLAN 924

Query: 200  CKRLQSLPQLPPNVEKVRVNGCASLVTL----LGALKLRKSSCTIIDFVDSLKLLGKNGL 255
            C RLQ LP LP ++ +V    C SL  +    + +  L+      ++FV +L+       
Sbjct: 925  CTRLQELPDLPSSIVQVDARNCTSLKNVSLRNVQSFLLKNRVIWDLNFVLALE------- 977

Query: 256  AISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAA 315
                                I+ PGS +P W  YQ+ G  +         N N  +G+  
Sbjct: 978  --------------------ILTPGSRLPDWIRYQSSGKEVIAELSPNWFNSN-FLGFGF 1016

Query: 316  CRVFHVPKHST-GIRRF-YRYPHPAHVLHCSMDEKFGHR---------------GSDHLW 358
              V  VPK S  G+ RF Y Y      L  S D   G R                 DH++
Sbjct: 1017 ANV--VPKFSNLGLSRFVYCYLS----LSRSSDFTHGFRVVPYPHFLCLNRQMLTLDHVY 1070

Query: 359  LLYLPRQSY--YCN----VKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYM 412
            LLY+P  S+  +C     + WH +  H + SF        P     G +VKR G    Y 
Sbjct: 1071 LLYVPLSSFSDWCPWGHIINWH-QVTHIKASFQ-------PRSDQFG-EVKRYGIGLAYS 1121

Query: 413  HE 414
            +E
Sbjct: 1122 NE 1123


>gi|297741032|emb|CBI31344.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 152/446 (34%), Positives = 213/446 (47%), Gaps = 50/446 (11%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           L  L  L LK CK L  LPS+ ++LKSL+   L GC KFE   E  G +E L E      
Sbjct: 182 LKNLNFLNLKNCKTLKSLPSSTSNLKSLEICILSGCSKFEEFPENFGNLEMLREFYADEI 241

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
           AI   PSS   ++NLK LSF+G  GPPS+    LP      R S+ +G+++ P LSGL S
Sbjct: 242 AIGVLPSSFSFLRNLKILSFKGYKGPPSTL-WLLP------RSSNSIGSILQP-LSGLCS 293

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
           L  LDLSDC L +      +G L SLK LYL  N+FVTLP++I+ L NLE L+LE+CKRL
Sbjct: 294 LINLDLSDCNLSDETNLGSLGLLSSLKELYLCGNDFVTLPSTISRLSNLEWLELENCKRL 353

Query: 204 QSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREF 263
           Q L +LP +V  V    C SL  +  + ++ K       F   +K+    G+    L+ F
Sbjct: 354 QVLSELPSSVYHVDAKNCTSLKDI--SFQVLKPL-----FPPIMKMDPVMGVLFPALKVF 406

Query: 264 LEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF--HV 321
                         +PGS IP W  YQ+ GS +    P    N N ++G+A   V    V
Sbjct: 407 --------------IPGSRIPDWISYQSSGSEVKAKLPPNWFNSN-LLGFAMSFVIFPQV 451

Query: 322 PKHSTGIRRFYRYPHPAHVLHCSM--DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNH 379
            +        +       ++ CS+  D K     SDH+ L YLP      N   + + +H
Sbjct: 452 SEAFFSADVLFDDCSSFKIITCSLYYDRKL---ESDHVCLFYLPFHQLMSN---YPQGSH 505

Query: 380 FRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE-VEEFDETTKQWTRFTSYNLNEFHH 438
            ++SF              G+ +KRCG    Y +E +   + +  Q+    S  L+    
Sbjct: 506 IKVSF-------AAFSMDAGIAIKRCGVGLVYSNEDLSHNNPSMSQFNSIFSPPLSPNKS 558

Query: 439 DFVGSNMAVAKANGSGC--CDDYDEE 462
             V   +   + NG+GC   D  +EE
Sbjct: 559 TVVLEEIHEGEPNGNGCSNVDGLEEE 584


>gi|359495289|ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/389 (36%), Positives = 194/389 (49%), Gaps = 70/389 (17%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
            L+ L  L+LK CK L  LPS I  LK L+   L GC KFE L E  G +E L+E    GT
Sbjct: 707  LNKLNFLSLKNCKMLKSLPSCICDLKCLEVFILSGCSKFEELPENFGNLEMLKEFCADGT 766

Query: 84   AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
            AIR  PSS  L++NL+ LSF  C GPP S S +LP      RRSS+    +L  LS L S
Sbjct: 767  AIRVLPSSFSLLRNLEILSFERCKGPPPSTSWWLP------RRSSNFSNFVLSPLSSLSS 820

Query: 144  LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
            L  L LS C + +GA    +G L SL+ L LS+NNFVTLP++I+ L +L+ L LE+CKRL
Sbjct: 821  LKTLSLSACNISDGATLDSLGFLSSLEDLDLSENNFVTLPSNISRLPHLKMLGLENCKRL 880

Query: 204  QSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL-------LGKNGLA 256
            Q+LP+LP ++  +    C SL T+        S+ +    + +++L       + ++GL 
Sbjct: 881  QALPELPTSIRSIMARNCTSLETI--------SNQSFSSLLMTVRLKEHIYCPINRDGLL 932

Query: 257  ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAAC 316
            +  L              S VV GS IP W  YQ+ GS +    P    + N  +G A C
Sbjct: 933  VPAL--------------SAVVFGSRIPDWIRYQSSGSEVKAELPPNWFDSN-FLGLALC 977

Query: 317  RVFHVPK---HSTGIRRFYR------------------YPHPAHVLHCSMDEKFGHRGSD 355
             V  VP+    +     F+R                  Y +P H+         G   SD
Sbjct: 978  -VVTVPRLVSLADFFGLFWRSCTLFYSTSSHASSSFDVYTYPNHLK--------GKVESD 1028

Query: 356  HLWLLYLPRQSYYCNVKWHFESNHFRLSF 384
            HLWL+Y+P   +   + W  +  H + SF
Sbjct: 1029 HLWLVYVPLPHF---INWQ-QVTHIKASF 1053


>gi|37781226|gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 179/305 (58%), Gaps = 12/305 (3%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 719  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 779  KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNA--------LSSQ 830

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            ++          +   +LSGL SL  LDLSDC + +G I +++G L SL+ L L+ NNF 
Sbjct: 831  VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILNNLGFLSSLEILILNGNNFS 890

Query: 181  TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-RKSSC 238
             +P ASI+    L++LKL  C RL+SLP+LPP+++ +  N C SL+++    K    S  
Sbjct: 891  NIPAASISRFTRLKRLKLHGCGRLESLPELPPSIKGIFANECTSLMSIDQLTKYPMLSDA 950

Query: 239  TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS-SIT 297
            T  +    +K      +  S+L++ LE +   + +F + VPG EIP+WF Y++ G+ S++
Sbjct: 951  TFRNCRQLVKNKQHTSMVDSLLKQMLEALYM-NVRFCLYVPGMEIPEWFTYKSWGTQSMS 1009

Query: 298  VTRPS 302
            V  P+
Sbjct: 1010 VALPT 1014


>gi|399920205|gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 160/515 (31%), Positives = 239/515 (46%), Gaps = 91/515 (17%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L     + CK++ RLPS +N ++ L+T ++ GC K 
Sbjct: 653  LEKLILEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKRLPSEVN-MEFLETFDVSGCSKL 711

Query: 63   ENLLETVGQV------------------------ESLEELDISGTAIRCPPSSIFLMKNL 98
            + + E VGQ+                        ESL ELD+SG  IR  P S FL +NL
Sbjct: 712  KMIPEFVGQMKRLSKLRLGGTAVEKLPSSIERWSESLVELDLSGIVIREQPYSRFLKQNL 771

Query: 99   KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
                          AS    FP    R+S      +L SL    SLT+L L+DC L EG 
Sbjct: 772  -------------IASSLGLFP----RKSPHPLIPLLASLKHFSSLTELKLNDCNLFEGD 814

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL--------- 209
            IP+DIG+L SL++L L  NNFV+LPASI+ L  LE + +E+CKRLQ LP+L         
Sbjct: 815  IPNDIGSLSSLRSLGLRGNNFVSLPASIHLLSKLEYINVENCKRLQQLPELSAIGVLSRT 874

Query: 210  -----------PPNVEKVRVNGCASLVTLLGALKLRKSS---CTIIDFVDSLKLLGKNGL 255
                       PP++ ++  N   + V  L  +  + +S     ++     +++L +  +
Sbjct: 875  DNCTALQLFPDPPDLCRITTNFSLNCVNCLSMVCNQDASYFLYAVLKRWIEIQVLSRCDM 934

Query: 256  AISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAA 315
             + M +        PS    +V+PGSEIP+WF  Q+ G S+T   PS  CN ++ +G+A 
Sbjct: 935  TVHMQKTH----RHPSEYLKVVIPGSEIPEWFNNQSVGDSVTEKFPSDACNYSKWIGFAV 990

Query: 316  CRVFHVPKHSTGIRRF-YRYPHPAHVL----HCSMDEKFGHRG-------SDHLWLLYLP 363
            C +     + + +    +  P    +L    +   D   G  G       SDHLWLL L 
Sbjct: 991  CALIVPQDNPSAVPEVPHLDPDTCQILCYWSNFVTDTNLGGVGDYVKQFVSDHLWLLVLR 1050

Query: 364  RQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTK 423
            R             N   ++F+ E  +    G+   +KVK+CG    Y H+ EE      
Sbjct: 1051 R-------PLRIPENCLEVNFVFEIRR--AVGNNRCMKVKKCGVRALYEHDREELISKMN 1101

Query: 424  QWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCDD 458
            Q    +S +L E   D     M  A  +GSG  DD
Sbjct: 1102 QSKSSSSISLYEEAMDEQEGAMVKATPSGSGGSDD 1136


>gi|357507537|ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
 gi|355499072|gb|AES80275.1| TMV resistance protein N [Medicago truncatula]
          Length = 1122

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/318 (37%), Positives = 172/318 (54%), Gaps = 31/318 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L  L L  TDI+++PLS+  L GL  L LK CK+LV LP  I+ L SL  LN+ GC 
Sbjct: 726  MENLSILALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLNSLIILNISGCS 785

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +   L + + +++ L+EL  + TAI   PS IF + NLK LSF GC GPP+ ++ + PF 
Sbjct: 786  RLCRLPDGLKEIQCLKELHANDTAIDELPSFIFYLDNLKVLSFAGCQGPPAMSTNWFPFN 845

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 +S+  G  +  S   L SL  L+LS C L E +IP+   +L SLK+L L+ NNFV
Sbjct: 846  WMFGGQSASTGFRLPTSFLSLHSLKYLNLSYCNLSEESIPNYFHHLSSLKSLDLTGNNFV 905

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
             +P+SI+ L  L  L L  C++LQ LP+LP  + ++  + C SL T       RK     
Sbjct: 906  IIPSSISKLSRLRFLCLNWCEQLQLLPELPSRIMQLDASNCDSLET-------RK----- 953

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP--GSEIPKWFMYQNEGSSITV 298
             D ++S                F++    P+ +F +++P  G EIP W + Q   S   V
Sbjct: 954  FDPIES----------------FMKGRCLPATRFDMLIPFPGDEIPSWCVSQGSVSWAKV 997

Query: 299  TRPSYLCNMNQVVGYAAC 316
              P+ L   ++ VG+A C
Sbjct: 998  HIPNNL-PQDEWVGFALC 1014


>gi|147817181|emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 188/385 (48%), Gaps = 74/385 (19%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L+LK CK L  LPS I  LK L+   L GC KFE L E  G +E L+E    GTAIR  P
Sbjct: 595 LSLKNCKMLKSLPSCICDLKCLEXFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLP 654

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
           SS  L++NL+ LSF  C GPP S S +LP      RRSS+    +L  LS L SL  L L
Sbjct: 655 SSFSLLRNLEILSFEXCKGPPPSTSWWLP------RRSSNFSNFVLSPLSSLSSLKTLSL 708

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           S C + +GA    +G L SL+ L LS+NNFVTLP++I  L +L+ L LE+CKRLQ+LP+L
Sbjct: 709 SACNISDGATLDSLGFLSSLEDLDLSENNFVTLPSNIXRLPHLKMLGLENCKRLQALPEL 768

Query: 210 PPNVEKVRVNGCASLVT--------LLGALKLRKS-SCTIIDFVDSLKLLGKNGLAISML 260
           P ++  +    C SL T        LL  ++L++   C I           ++GL +  L
Sbjct: 769 PTSIRSIMARNCTSLETISNQSFSSLLMTVRLKEHIYCPI----------NRDGLLVPAL 818

Query: 261 REFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFH 320
                         S V  GS IP W  YQ+ GS +    P    + N  +G A C V  
Sbjct: 819 --------------SAVXFGSRIPDWIRYQSSGSEVKAELPPNWFDSN-FLGLALC-VVT 862

Query: 321 VPK---HSTGIRRFYR------------------YPHPAHVLHCSMDEKFGHRGSDHLWL 359
           VP+    +     F+R                  Y +P H+         G   SDHLWL
Sbjct: 863 VPRLVSLADFFGLFWRSCTLFYSTSSHXSSSFDVYTYPNHLK--------GKVESDHLWL 914

Query: 360 LYLPRQSYYCNVKWHFESNHFRLSF 384
           +Y+P   +   + W  +  H + SF
Sbjct: 915 VYVPLPHF---INWQ-QVTHIKASF 935


>gi|357504435|ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
 gi|355497521|gb|AES78724.1| TMV resistance protein N [Medicago truncatula]
          Length = 1137

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 177/320 (55%), Gaps = 14/320 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L +L L++T IK++P S+  L  L+ L L+ CKNLV LP+ ++ LKSL  LN+ GC 
Sbjct: 725  MENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCS 784

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA--SCYLP 118
            K  +  E + +++SLEEL  + T+I   PSS+F ++NLK +SF GC GP + +  +  LP
Sbjct: 785  KLHSFPEGLKEMKSLEELFANETSIEELPSSVFFLENLKVISFAGCKGPVTKSVNTFLLP 844

Query: 119  FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            F    +    +     LP    L SL  L+LS C L E ++P D  NL SL  L LS NN
Sbjct: 845  F-TQFLGTPQEPNGFRLPPKLCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSGNN 903

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            FV  P+SI+ L  LE L+L  C+ LQ  P+ P ++  +  + CASL T      L +  C
Sbjct: 904  FVRPPSSISKLPKLEYLRLNCCEMLQKFPEFPSSMRLLDASNCASLET--SKFNLSR-PC 960

Query: 239  TIIDFVDSLKLLGKNGLAISMLREFLEVVS--APSHKFSIVVPGSEIPKWFMYQNEGSSI 296
            ++  F   ++   ++     +L+ ++E      P  +F +++ GSEIP WF      S  
Sbjct: 961  SL--FASQIQ---RHSHLPRLLKSYVEAQEHGLPKARFDMLITGSEIPSWFTPSKYVSVT 1015

Query: 297  TVTRPSYLCNMNQVVGYAAC 316
             ++ P + C   + +G+A C
Sbjct: 1016 NMSVP-HNCPPTEWMGFALC 1034



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 24/190 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     L  L LK CK L  LP  I  + SLK L+L GC +F++L E    
Sbjct: 666 TSLTEIHPSLLSHKKLALLNLKDCKRLKTLPCKIE-MSSLKGLSLSGCCEFKHLPEFDET 724

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +E+L +L +  TAI+  PSS+  + +L +L    C              + L    S+L 
Sbjct: 725 MENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKN-----------LVCLPNTVSELK 773

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           +L++ ++SG   L             + P  +  + SL+ L+ ++ +   LP+S+  L N
Sbjct: 774 SLLILNVSGCSKL------------HSFPEGLKEMKSLEELFANETSIEELPSSVFFLEN 821

Query: 192 LEKLKLEDCK 201
           L+ +    CK
Sbjct: 822 LKVISFAGCK 831



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 30/260 (11%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTL-KGCKNLVRLPSNINSL-KSLKTLNLLGC-- 59
           ++ + +D     E    IE  S + QL L K C+  ++LP  +N    SL+ L+  GC  
Sbjct: 542 IQGIAMDLVQPYEASWKIEAFSKISQLRLLKLCE--IKLPLGLNRFPSSLRVLDWSGCPL 599

Query: 60  -------------------FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
                               K E L      +E+L+ +++S +           + NL+ 
Sbjct: 600 RTLPLTNHLVEIVAIKLYRSKIEQLWHGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEF 659

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCGLGEGAI 159
           L   GC          L      +    D   L  LP    + SL  L LS C   +  +
Sbjct: 660 LVLEGCTSLTEIHPSLLSHKKLALLNLKDCKRLKTLPCKIEMSSLKGLSLSGCCEFK-HL 718

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK---V 216
           P     + +L  L L +     LP+S+  L +L  L LE+CK L  LP     ++    +
Sbjct: 719 PEFDETMENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLIL 778

Query: 217 RVNGCASLVTLLGALKLRKS 236
            V+GC+ L +    LK  KS
Sbjct: 779 NVSGCSKLHSFPEGLKEMKS 798


>gi|105922482|gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 130/303 (42%), Positives = 171/303 (56%), Gaps = 24/303 (7%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI +L GLV L LK C  L  LP+NI  LK+L+ LNL GCFK E L E +G V +LEELD
Sbjct: 698 SIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELD 757

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +  TAI   PS+  L K LK LSF GC GP +  S Y  F    + R+     LML SLS
Sbjct: 758 VGRTAITQLPSTFGLWKKLKVLSFDGCKGP-APKSWYSLFSFRSLPRNPCPITLMLSSLS 816

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            L SLTKL+LS+C L EG +P D+    SL+ L L  NNFV +P+SI+ L  L+ L+L +
Sbjct: 817 TLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGN 876

Query: 200 CKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL-KLRKSSCTIIDFVDSLKLLGKNGLAIS 258
           CK+LQSLP LP  +E + V+GCASL TL     +  +S    + F++  +L    G  IS
Sbjct: 877 CKKLQSLPDLPSRLEYLGVDGCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQG-NIS 935

Query: 259 MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAACR 317
           M                    GSEIP WF +++ G S+T+   P    + ++ +G A C 
Sbjct: 936 M--------------------GSEIPSWFHHKSVGHSLTIRLLPYEHWSSSKWMGLAVCA 975

Query: 318 VFH 320
            F 
Sbjct: 976 FFE 978


>gi|225460149|ref|XP_002276056.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1131

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 153/437 (35%), Positives = 208/437 (47%), Gaps = 70/437 (16%)

Query: 13   DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            ++ E+  S+  L  L  L+LK CK L RLPS I + KSL+TL L GC KFE   E  G +
Sbjct: 681  NLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNL 740

Query: 73   ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            E L+EL   GT +R  P S F M+NLK LSFRGC GP S++  +        +RSS+   
Sbjct: 741  EMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGC-GPASASWLW-------SKRSSNSIC 792

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
              +PS S L  L KLDLSDC + +GA    +G L SL+ L LS NNFVTLP +++ L +L
Sbjct: 793  FTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSSLEDLNLSGNNFVTLP-NMSGLSHL 851

Query: 193  EKLKLEDCKRLQSLPQLPPNVEKV-----------RVNGCASLVTL-LGALK-------- 232
              L LE+CKRLQ+LPQ P ++E +            ++G + L TL LG  K        
Sbjct: 852  VFLGLENCKRLQALPQFPSSLEDLILRGNNFVTLPNMSGLSHLKTLVLGNCKRLEALPQL 911

Query: 233  ------LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKW 286
                  L  + CT +   +SLKLL              E+ S  S   + V+PGS IP W
Sbjct: 912  PSSIRSLNATDCTSLGTTESLKLLRP-----------WELESLDS-DVAFVIPGSRIPDW 959

Query: 287  FMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---KHSTGIRRFYRYP------HP 337
              YQ+  + I    P  L      +G+A   VF       H      F  +         
Sbjct: 960  IRYQSSENVIEADLP--LNWSTNCLGFALALVFSSQPPVSHWLWAEVFLDFGTCCCSIET 1017

Query: 338  AHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSG 397
                H   D        DH+ L Y+P Q    ++  H +  H + +F           S 
Sbjct: 1018 QCFFHLEGDNCVLAHEVDHVLLNYVPVQP---SLSPH-QVIHIKATF--------AITSE 1065

Query: 398  TGLKVKRCGFHPGYMHE 414
            TG ++KRCG    Y++E
Sbjct: 1066 TGYEIKRCGLGLVYVNE 1082


>gi|332330341|gb|AEE43927.1| TIR-NBS-LRR resistance protein muRdr1C [Rosa multiflora]
          Length = 1139

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 156/481 (32%), Positives = 221/481 (45%), Gaps = 59/481 (12%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            SI  L  L     + CK++  LP  ++ ++ L+T ++ GC K + + E VGQ + L  L 
Sbjct: 668  SIASLKRLKFWNFRNCKSIKSLPGEVD-MEFLETFDVSGCSKLKMIPEFVGQTKRLSRLC 726

Query: 80   ISGTAIRCPPSSI-FLMKNLKTLSFRGC--NGPPSS--------ASCYLPFPINLMRRSS 128
            + GTA+   PSSI  L ++L  L   G      P S        AS +  FP    R+S 
Sbjct: 727  LGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSFGLFP----RKSP 782

Query: 129  DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 +L SL    SL  L L+DC L EG IP+DIG+L SLK L L  NNFV+LPASI+ 
Sbjct: 783  HPLLPLLASLKHFSSLRTLKLNDCNLCEGEIPNDIGSLSSLKRLELRGNNFVSLPASIHL 842

Query: 189  LFNLEKLKLEDCKRLQSLPQLP-PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSL 247
            L  L    +E+C +LQ LP LP  +   V  N C SL        L + S   +D  + L
Sbjct: 843  LSKLTYFGVENCTKLQQLPALPVSDYLNVLTNNCTSLQVFPDPPDLSRLSEFFLDCSNCL 902

Query: 248  KLLGKNGLAISMLREFLEVV---------------SAPSHKFSIVVPGSEIPKWFMYQNE 292
                 +    S+L+ ++E+                  P      V+PGSEIP+WF  Q+ 
Sbjct: 903  SCQDSSYFLYSVLKRWIEIQVLSRCDMMVHMQETNRRPLEFVDFVIPGSEIPEWFNNQSV 962

Query: 293  GSSITVTRPSYLCNMNQVVGYAACRVFHVPKH--STGIRRFYRYPHPAHVLHCSMDEKFG 350
            G  +T   PS  CN ++ +G+A C +  VP+   S  + R +  P    +     D   G
Sbjct: 963  GDRVTEKLPSDACN-SKWIGFAVCALI-VPQDNPSALLERPFLDPDTYGIECYWNDYGIG 1020

Query: 351  HRG---------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLK 401
              G         SDHLWLL L          +    N   ++F+ E  +    G+  G+K
Sbjct: 1021 FVGLVVPVKQFVSDHLWLLVLLS-------PFRKPENCLEVNFVFEITR--AVGNNRGMK 1071

Query: 402  VKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAK----ANGSGCCD 457
            VK+CG    Y H+VEE      Q ++ +S +L E   D     M  AK     +GSG  D
Sbjct: 1072 VKKCGVRALYEHDVEELISKMNQ-SKSSSISLYEEGMDEQEGAMVKAKHEAATSGSGGSD 1130

Query: 458  D 458
            D
Sbjct: 1131 D 1131


>gi|356560337|ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 179/319 (56%), Gaps = 14/319 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L  L L+ T I ++P S+  L GL  L LK CKNLV LP   ++L SL  LN+ GC 
Sbjct: 718  MEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLNVSGCS 777

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC--YLP 118
            K   L E + +++SLEELD SGTAI+  PSS+F ++NLK++SF GC  P S++     LP
Sbjct: 778  KLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGCKKPVSNSVSGFLLP 837

Query: 119  FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            F      + +     + PS   L SL +++LS C L E + P    +L SL+ L L+ NN
Sbjct: 838  FQWVFGNQQTPTAFRLPPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSSLQFLDLTGNN 897

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS- 237
            FVTLP+ I+ L  LE L L  CK+L+ LP+LP  ++ +  + C SL T     K   S  
Sbjct: 898  FVTLPSCISNLTKLEILLLNLCKKLKRLPELPSRMKHLDASNCTSLET----SKFNPSKP 953

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
            C++  F  S      N      L  +LE +  P  +F +++PGSEIP WF+ Q   S   
Sbjct: 954  CSL--FASS----PSNFHFSRELIRYLEELPLPRTRFEMLIPGSEIPSWFVPQKCVSLAK 1007

Query: 298  VTRPSYLCNMNQVVGYAAC 316
            +  P + C +N+ VG+A C
Sbjct: 1008 IPVP-HNCPVNEWVGFALC 1025



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 26/192 (13%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     L  + LK CK L  LPS +  + SLK LNL GC +F+ L E    
Sbjct: 659 TSLTEVHPSLVRHKKLAMMNLKDCKRLKTLPSKME-MSSLKDLNLSGCSEFKYLPEFGES 717

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +E L  L + GTAI   PSS+  +  L  L  + C                         
Sbjct: 718 MEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCK-----------------------N 754

Query: 132 ALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
            + LP +   L SL  L++S C    G +P  +  + SL+ L  S      LP+S+  L 
Sbjct: 755 LVCLPDTFHNLNSLIVLNVSGCS-KLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLE 813

Query: 191 NLEKLKLEDCKR 202
           NL+ +    CK+
Sbjct: 814 NLKSISFAGCKK 825



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 89/218 (40%), Gaps = 8/218 (3%)

Query: 23  LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG 82
           L S L  L  +GC  L  LP N N L  +  L L    + E L      +E L+ +++S 
Sbjct: 578 LPSSLKVLHWRGCP-LKTLPLN-NKLDEVVDLKLPHS-RIEQLWRGTKLLEKLKSINLSF 634

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL-MLPSLSGL 141
           +             NL++L   GC          +      M    D   L  LPS   +
Sbjct: 635 SKNLKQSPDFGGAPNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLKDCKRLKTLPSKMEM 694

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
            SL  L+LS C   +  +P    ++  L  L L       LP+S+ CL  L  L L++CK
Sbjct: 695 SSLKDLNLSGCSEFK-YLPEFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCK 753

Query: 202 RLQSLPQLPPNVEK---VRVNGCASLVTLLGALKLRKS 236
            L  LP    N+     + V+GC+ L  L   LK  KS
Sbjct: 754 NLVCLPDTFHNLNSLIVLNVSGCSKLGCLPEGLKEIKS 791



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 28   VQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRC 87
            V + L+ CK L  LPS +  + SLK L+L GC +FE L E    +E +  L++  T I  
Sbjct: 1216 VMMNLEDCKRLKTLPSKME-MSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITK 1274

Query: 88   PPSSI 92
             PSS+
Sbjct: 1275 LPSSL 1279


>gi|359493275|ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
 gi|296081003|emb|CBI18507.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 210/447 (46%), Gaps = 65/447 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+ELLLD T I+ +P SIE L GLV L L+ CK LV LP ++ +L+SL+T+ + GC 
Sbjct: 806  MENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCS 865

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + L + VG ++ L +L   GTAIR PP SI L++ L+ L + GC   PSS+   L   
Sbjct: 866  QLDQLPKNVGSLQHLVQLHADGTAIRQPPDSIVLLRGLRVLIYPGCKILPSSSLSSLFSF 925

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              L  R S+   L LPS   L SLT L+ S C                      S+NNF+
Sbjct: 926  WLLHGRGSNGIGLRLPSFPCLSSLTNLNQSSCN--------------------PSRNNFL 965

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            ++P SI+ L NL  L L  C+ L  +P+LPP+V  +    C SL     ++ + +    +
Sbjct: 966  SIPTSISALTNLRDLWLGQCQNLTEIPELPPSVPDINSRDCTSLSLSSSSISMLQWLQFL 1025

Query: 241  I-------------DFVDSLKLLGKNGLAIS-----------MLREFLEVVSAPSHKFSI 276
                          D  D+L+    N ++ S           + ++F E V+     FS+
Sbjct: 1026 FYYCLKPVEEQFNDDKRDALQRFPDNLVSFSCSEPSPSNFAVVKQKFFENVA-----FSM 1080

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKH-----STGIRR 330
            ++PGS IPKW  ++N GS + V  P+   + +  +G+A C V  HVP       S     
Sbjct: 1081 ILPGSGIPKWIWHRNMGSFVKVKLPTDWYD-DDFLGFAVCSVLEHVPDRIVCHLSPDTLD 1139

Query: 331  FYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP-RQSYYCNVKWHFESNHFRLSFMDERE 389
            +       H  HC    K     S+H+WL Y P  Q     V    E +H  +SF    E
Sbjct: 1140 YGELRDFGHDFHC----KGSDVSSEHVWLGYQPCAQLRMFQVNDPNEWSHMEISF----E 1191

Query: 390  KHCPAGSGTGLKVKRCGFHPGYMHEVE 416
                  S     VK CG    Y  ++E
Sbjct: 1192 ATHRLSSRASNMVKECGVRLIYAEDLE 1218



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 99/202 (49%), Gaps = 24/202 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ME L +L L  T I+E+P SI + ++GLV L LK CKNL  LP+ I  LKSL+ L L GC
Sbjct: 734 MEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKLKSLEYLFLSGC 793

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K EN  E +  +E+L+EL + GT+I   PSSI  +K L  L+ R C    S     LP 
Sbjct: 794 SKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKKLVS-----LP- 847

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                            S+  L SL  + +S C   +  +P ++G+L  L  L+      
Sbjct: 848 ----------------DSMCNLRSLQTIIVSGCSQLD-QLPKNVGSLQHLVQLHADGTAI 890

Query: 180 VTLPASINCLFNLEKLKLEDCK 201
              P SI  L  L  L    CK
Sbjct: 891 RQPPDSIVLLRGLRVLIYPGCK 912



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 29/229 (12%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+LD  + + E+  SI  L  ++ L LK CK L   PS I  +++L+ LN  GC + 
Sbjct: 666 LEKLILDGCSSLLEVHPSIGRLKKIIVLNLKNCKQLSSFPS-ITDMEALEILNFAGCSEL 724

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFL-MKNLKTLSFRGCNGPPSSASCYLPFPI 121
           +   +    +E L +L +S TAI   PSSI   +  L  L  + C    S  +C      
Sbjct: 725 KKFPDIQCNMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFK--- 781

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                              L SL  L LS C   E   P  + ++ +LK L L   +   
Sbjct: 782 -------------------LKSLEYLFLSGCSKLEN-FPEIMEDMENLKELLLDGTSIEV 821

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           LP+SI  L  L  L L  CK+L SLP    N   ++ + V+GC+ L  L
Sbjct: 822 LPSSIERLKGLVLLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCSQLDQL 870


>gi|332330346|gb|AEE43932.1| TIR-NBS-LRR resistance protein muRdr1H [Rosa multiflora]
          Length = 1122

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 239/496 (48%), Gaps = 72/496 (14%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L    L+ CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 653  LEKLVLEGCTNLVKIHPSIALLKRLRIWNLRNCKSIRSLPSEVN-MEFLETFDVSGCSKL 711

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGC--NGPPSS------- 112
            + + E V Q++ L +L + GTA+   PSSI  L ++L  L   G      P S       
Sbjct: 712  KMISEFVMQMKRLSKLYLGGTAVEKLPSSIEHLSESLVVLDLSGIVIREQPYSRLLKQNL 771

Query: 113  -ASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
             AS +  FP    R+S      +L SL     L  L L+DC L EG IP+DIG+L SL+ 
Sbjct: 772  IASSFGLFP----RKSPHPLIPLLASLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLQR 827

Query: 172  LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP--PNVEKVRVNGCASLVTLLG 229
            L L  NNFV+LPASI+    LE + +E+CKRLQ LP+LP  PN+ ++R N   + +  L 
Sbjct: 828  LELRGNNFVSLPASIHL---LEDVDVENCKRLQQLPELPDLPNLCRLRANFWLNCINCLS 884

Query: 230  ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH----KFSIVVPGSEIPK 285
             +  + +S  +   +       K  + I  L     ++   +H     F  V+PGSEIP+
Sbjct: 885  MVGNQDASYFLYSVL-------KRWIEIEALSRCDMMIRQETHCSFEYFRFVIPGSEIPE 937

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHV----- 340
            WF  Q+ G ++T   P   CN ++ +G+A C +     + + +      P  +H+     
Sbjct: 938  WFNNQSVGDTVTEKLPWDACN-SKWIGFAVCALIVPHDNPSAV------PEKSHLDPDTC 990

Query: 341  -LHCSMDE-----------KFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDER 388
             + C  ++                 SDHL+LL LP         +    N+  ++F+ + 
Sbjct: 991  CIWCFWNDYGIDVIGVGTNNVKQIVSDHLYLLVLPS-------PFRKPENYLEVNFVFKI 1043

Query: 389  EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHD-----FVGS 443
             +    GS  G+KVK+CG    Y H+ EE      Q ++ +S +L E   D      V +
Sbjct: 1044 AR--AVGSNRGMKVKKCGVRALYEHDTEELISKMNQ-SKTSSISLYEEAMDEQEGAMVKA 1100

Query: 444  NMAVAKANGSGCCDDY 459
                A +   G  D+Y
Sbjct: 1101 TQEAATSRSGGSDDEY 1116


>gi|332330344|gb|AEE43930.1| TIR-NBS-LRR resistance protein muRdr1F [Rosa multiflora]
          Length = 1161

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 227/513 (44%), Gaps = 98/513 (19%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV------- 72
            SI  L  L     + CK++  LPS +N ++ L+T ++ GC K + + E VGQ        
Sbjct: 669  SIASLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKTLSKLC 727

Query: 73   -----------------ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC 115
                             ESL ELD++G  IR  P S+FL +NL+ +SF G          
Sbjct: 728  IGGSAVENLPSSFERLSESLVELDLNGIVIREQPYSLFLKQNLR-VSFFGL--------- 777

Query: 116  YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               FP    R+S      +L SL    SLT+L L+DC L EG IP+DIG L SL+ L L 
Sbjct: 778  ---FP----RKSPCPLTPLLASLKHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQLI 830

Query: 176  KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGALKLR 234
             NNFV LPASI+ L  L+++ +E+CKRLQ LP+LP   E +V  + C SL        L 
Sbjct: 831  GNNFVNLPASIHLLSKLKRINVENCKRLQQLPELPATDELRVVTDNCTSLQVFPDPPNLS 890

Query: 235  KSSCTIIDFVDSLKLLGKNGL---------------------------------AISMLR 261
            +     +  ++  + +G  G                                   ++M+ 
Sbjct: 891  RCPEFWLSGINCFRAVGNQGFRYFLYSRLKQLLEVLSLSLCLSLPPSLPPLSLSLVNMMV 950

Query: 262  EFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHV 321
              ++      + F +V+PGSEIP+WF  Q+ G S+    PSY CN ++ +G A C +  V
Sbjct: 951  CMVQETPWSLYYFRLVIPGSEIPEWFNNQSVGDSVIEKLPSYACN-SKWIGVALCFLI-V 1008

Query: 322  PKHSTGIRRFYRYPHPAHVLHCSMDEK-FGHRG---------SDHLWLLYLPRQSYYCNV 371
            P+ +       R+  P   + C  ++   GH           SDHL  + LP+  +    
Sbjct: 1009 PQDNPSAVPEVRHLDPFTRVFCCWNKNCSGHSRLVTRVKQIVSDHLLFVVLPKFIWKPQN 1068

Query: 372  KWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSY 431
                     +  F+ ++      G+  GL+VK+CG    Y H+ EE      Q ++ +S 
Sbjct: 1069 CPEDTCTEIKFVFVVDQ----TVGNSRGLQVKKCGARILYEHDTEELISKMNQ-SKSSSI 1123

Query: 432  NLNEFHHD-----FVGSNMAVAKANGSGCCDDY 459
            +L E   D      V +    + +   G  D+Y
Sbjct: 1124 SLYEEAVDEQEGAMVKATQEASTSRSGGSDDEY 1156


>gi|399920191|gb|AFP55538.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1320

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 230/501 (45%), Gaps = 83/501 (16%)

Query: 1    MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
            ++ L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC
Sbjct: 704  IQNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGC 762

Query: 60   FKFENLLETVGQV------------------------ESLEELDISGTAIRCPPSSIFL- 94
             K + + E VGQ+                        ESL ELD+SG  IR  P S FL 
Sbjct: 763  SKLKMIPEFVGQMKRLSKFCLGGTAVEKLPSSFEHLSESLVELDLSGIVIREQPYSFFLK 822

Query: 95   MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
            ++NL+             + C L FP    R+S      +L SL     LT+L+LSDC L
Sbjct: 823  LQNLRV------------SVCGL-FP----RKSPHPLIPVLASLKHFSYLTELNLSDCNL 865

Query: 155  GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
             EG IP+DIG+L SLK L L  NNFV+LPASI  L  L  + +E+C RLQ LP+LPP  +
Sbjct: 866  CEGEIPNDIGSLSSLKYLELGGNNFVSLPASIRLLSKLRHIDVENCTRLQQLPELPPASD 925

Query: 215  KVRV--NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
            ++ V  + C SL        L + S   +D  + L     +    S+L+  +E       
Sbjct: 926  RILVTTDNCTSLQVFPDPPDLSRVSEFWLDCSNCLSCQDSSYFLHSVLKRLVEETPCSFE 985

Query: 273  KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
                ++PGSEIP+WF  Q+ G S+T   P   CN ++ +G+A C +     + + +    
Sbjct: 986  SLKFIIPGSEIPEWFNNQSVGDSVTEKLPLDACN-SKWIGFAVCALIVPQDNPSAVPEDP 1044

Query: 333  RYP-----HPAHVLHCSMDEKFG-----------HRGSDHLWLLYLPRQSYYCNVK---- 372
                     P   L   +   +G              SDHL L+ LP   + C       
Sbjct: 1045 NLDPDICLDPDTCLIYCLSNGYGICCVGRRIPVKQFVSDHLLLVVLP-SPFRCPEDRLAD 1103

Query: 373  -WHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSY 431
             W+ E   F  +           G+   +KVK+CG    Y H+ EE      Q ++ +S 
Sbjct: 1104 WWNDEVTFFFKA----------VGNNRCIKVKKCGVRALYEHDTEELTSKMNQ-SKSSSI 1152

Query: 432  NLNEFHHDFVGSNMAVAKANG 452
            ++ E   +  G   A+ KA G
Sbjct: 1153 SVYEAMDEQEG---AMVKATG 1170


>gi|399920221|gb|AFP55568.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1143

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 226/497 (45%), Gaps = 99/497 (19%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV------- 72
            SI  L  L     + CK++  LP  ++ ++ L+T ++ GC K + + E VGQ        
Sbjct: 679  SIASLKRLKIWNFRNCKSIKSLPGEVD-MEFLETFDVSGCSKLKMIPEFVGQTKRLSRLC 737

Query: 73   ----------------ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
                            ESL ELD+SG  IR  P S FL +NL              AS  
Sbjct: 738  LGGTAVEKLPSIEHLSESLVELDLSGIVIREQPYSRFLKQNL-------------IASSL 784

Query: 117  LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              FP    R+S      +L SL    SLT+L L+DC L EG +P+DIG+L SL+ L L  
Sbjct: 785  GLFP----RKSPHPLTPLLASLKHFSSLTELKLNDCNLCEGELPNDIGSLSSLRRLELRG 840

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL------ 227
            NNFV+LPASI+ L  L  + +E+CKRLQ LP+  P+      V  N C SL         
Sbjct: 841  NNFVSLPASIHLLSKLRYINVENCKRLQQLPE--PSARGYLSVNTNNCTSLQVFPDLPGL 898

Query: 228  --LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEV---VSAPSHKF-----SIV 277
              L A +L  S+C     + ++     +    S+L+  +EV   V  P          ++
Sbjct: 899  CRLLAFRLCCSNC-----LSTVGNQDASYFIYSVLKRLVEVGMMVHMPETPRCFPLPELL 953

Query: 278  VPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRR--FYRYP 335
            +PGSEIP+WF  Q+ G S+T   PS  CN ++ +G+A C +   P + +   R  F  Y 
Sbjct: 954  IPGSEIPEWFNNQSVGDSVTEKLPSDACNYSKWIGFAVCALIGPPDNPSAASRILFINYR 1013

Query: 336  HPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSY---------YCN-VKWHFESNHFRLSFM 385
              ++V       +     SDHL LL+LP + +          CN V++ F S        
Sbjct: 1014 WNSYVCTPIAYFEVKQIVSDHLVLLFLPSEGFRKPENCLEDTCNEVEFVFGSK------- 1066

Query: 386  DEREKHCPAGSGTGLK-VKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
                     G  + L  +K+CG    Y H+VEE      Q ++ +S +LNE   +  G+ 
Sbjct: 1067 --------GGFYSDLHIIKKCGARALYEHDVEELISKMNQ-SKISSISLNEAVDEQEGAM 1117

Query: 445  MAV---AKANGSGCCDD 458
            +     A  +G G  DD
Sbjct: 1118 VKATQEAATSGRGGSDD 1134


>gi|399920201|gb|AFP55548.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1115

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 157/491 (31%), Positives = 238/491 (48%), Gaps = 70/491 (14%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 652  LEKLVLEGCTNLVKVHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKL 710

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRG--CNGPPSS------- 112
            + + E VGQ++ L +L + GTAI   PSSI  L ++L  L   G      P S       
Sbjct: 711  KMIPEFVGQMKRLSKLSLGGTAIEKLPSSIEHLSESLVELDLSGLVIREQPYSRFLKQNL 770

Query: 113  -ASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
             AS +  FP    R+       +L SL    SLT L+L+DC L EG IP+DIG+L SL++
Sbjct: 771  IASSFGLFP----RKRPHPLVPLLASLKHFSSLTTLNLNDCNLCEGEIPNDIGSLSSLES 826

Query: 172  LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP-NVEKVRVNGCASLVTLLGA 230
            L L  NNFV+L ASI+ L  L+ + +E+C+RLQ LP+LP  +  +V  + C SL      
Sbjct: 827  LELRGNNFVSLSASIHLLSKLKHINVENCRRLQQLPELPASDYLRVVTDNCTSLQMFPDP 886

Query: 231  LKLRKSSCTIIDF----VDSLKLLGKNGLA---ISMLREFLEVVSAPSHKFSIVVPGSEI 283
              L    C I +F    V+ L  +G    +    S+L+  LE     S  F  V+PGSEI
Sbjct: 887  QDL----CRIGNFEFNCVNCLSTVGNQDASYFLYSVLKRLLEETHRSSEYFRFVIPGSEI 942

Query: 284  PKWFMYQNEGSSITVTRPS-YLCNMNQVVGYAACRVFHVPKHSTGIRRFY----RYPHPA 338
            P+WF  Q+ G S+T   PS Y+      +G+A C +   P + + +        R+P  +
Sbjct: 943  PEWFNNQSVGDSVTEKLPSDYMW-----IGFAVCALIVPPDNPSAVPEKISLRCRWPKGS 997

Query: 339  HVLHCSMDEK-----FGHRGSDHLWLLYLPRQSYY----CN-VKWHFESNHFRLSFMDER 388
               H  +  +          SDHL+LL L +   Y    CN  K+ F  N          
Sbjct: 998  PWTHSGVPSRGACFVVKQIVSDHLFLLVLRKPENYLEDTCNEAKFDFSIN---------- 1047

Query: 389  EKHCPAGSGTGLKVKRCGFHPGYMHEVEEF-DETTKQWTRFTSYNLNEFHHDFVGSNMAV 447
              +C       +KVK+CG    Y H+++E   +  +  +  + Y   +     V +    
Sbjct: 1048 --NC-------IKVKKCGARAFYQHDMDELISKMNRSKSSISLYEAMDEQEAAVKATQEA 1098

Query: 448  AKANGSGCCDD 458
            A +  SGC DD
Sbjct: 1099 ATSR-SGCSDD 1108


>gi|399920225|gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 218/461 (47%), Gaps = 87/461 (18%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 653  LEKLVLEGCTNLVKIHPSIALLKRLKLCNFRNCKSIKSLPSELN-MEFLETFDISGCSKL 711

Query: 63   ENLLETVGQV------------------------ESLEELDISGTAIRCPPSSIFLMKNL 98
            + + E VGQ                         ESL ELD+SG  IR  P S+F  +N 
Sbjct: 712  KKIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPHSLFFKQNF 771

Query: 99   KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
            +  SF               FP    R+S      +L SL    SLT+L L+DC L EG 
Sbjct: 772  RVSSFG-------------LFP----RKSPHPLIPLLASLKQFSSLTELKLNDCNLCEGE 814

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP-NVEKVR 217
            IP+DIG+L SL+ L L  NNFV+LPASI+ L  LE + +E+C RLQ LP+LP  +   V+
Sbjct: 815  IPNDIGSLSSLRKLELRGNNFVSLPASIHLLSKLEVITVENCTRLQQLPELPASDYILVK 874

Query: 218  VNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV 277
             + C SL        L    C I +F    +L   N  ++   R  LE +         V
Sbjct: 875  TDNCTSLQVFPDPPDL----CRIGNF----ELTCMNCSSLETHRRSLECL-------EFV 919

Query: 278  VPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP-- 335
            +PG EIP+WF  Q+ G S+T   PS  CN ++ +G+A C +  VP+ +     F   P  
Sbjct: 920  IPGREIPEWFNNQSVGDSVTEKLPSDACN-SKCIGFAVCALI-VPQDNPSA--FPENPLL 975

Query: 336  ---------HPAHVLHCSMDEKFGHRG--SDHLWLLYLPRQSYYCNVKWHFESNH-FRLS 383
                     H  +    S+ + F  R   SDHLWL  L  +S +  ++   E N  F+++
Sbjct: 976  DPDTCRIGCHWNNYGVYSLCQNFRVRQFVSDHLWLFVL--RSLFWKLEKRLEVNFVFKIT 1033

Query: 384  FMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
                       G+   +KVK+CG    Y ++ EE      Q
Sbjct: 1034 R--------AVGNNRCIKVKKCGVRALYEYDKEELISKMNQ 1066


>gi|105922738|gb|ABF81434.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1307

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/290 (41%), Positives = 150/290 (51%), Gaps = 73/290 (25%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 746 MNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 805

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + + E +G+VESL+E D SGT+IR  P+SIF++KNLK LS  GC              
Sbjct: 806 ELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDGCK------------- 852

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                       ++LPSLSGL SL  L L  C L EGA+P DIG L SLK+L LS+NNFV
Sbjct: 853 ----------RIVVLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFV 902

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN LF LE L LEDC  L+SLP++P  V+                          
Sbjct: 903 SLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQ-------------------------- 936

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
                        GL            S P   FSI VPG+EI  WF +Q
Sbjct: 937 ------------TGL------------SNPRPGFSIAVPGNEILGWFNHQ 962



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 32/251 (12%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN--LVRLPSNI-NSLK-----SLKT 53
           E +  + LD   IKE   +++  S + +L L    N  L   P ++ N L+     S  +
Sbjct: 561 EKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKIDNVQLSEGPEDLSNELRFIEWHSYPS 620

Query: 54  LNLLGCFKFENLLETVGQVESLEEL-----DISGTAIRCPPSSIFLMK--------NLKT 100
            +L    + + L+E      SLE+L           I    +S++L K        NL++
Sbjct: 621 KSLPSGLQVDELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLES 680

Query: 101 LSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE 156
           L   GC       PS A       +NL+   S     +LP+   + SL    L  C   E
Sbjct: 681 LILEGCTSLSEVHPSLAHHKKLQYVNLVNCKS---IRILPNNLEMESLNVFTLDGCSKLE 737

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP---PNV 213
              P  +GN++ L  L L +     L +SI+ L  L  L +  CK L+S+P       ++
Sbjct: 738 -KFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSL 796

Query: 214 EKVRVNGCASL 224
           +K+ ++GC+ L
Sbjct: 797 KKLDLSGCSEL 807


>gi|399920187|gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 171/323 (52%), Gaps = 10/323 (3%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 622 LEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKL 680

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
           + + E VGQ + L +L + GTA+   PSSI  L K+L  L   G        S +L   +
Sbjct: 681 KMIPEFVGQTKRLSKLYLGGTAVEKLPSSIEHLSKSLVELDLSGIVIREQPYSLFLKQNL 740

Query: 122 N------LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
                  L R+S      +L SL    SLT L L+DC L EG IP+DIG+L SL  L L 
Sbjct: 741 IVSSFGLLPRKSPHPLIPLLASLKQFSSLTSLKLNDCNLCEGEIPNDIGSLPSLNWLELR 800

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP-NVEKVRVNGCASLVTLLGALKLR 234
            NNFV+LPASI+ L  L  + LE+CKRLQ LP+LP  +   V  + C SL+       L 
Sbjct: 801 GNNFVSLPASIHLLSKLSYIDLENCKRLQQLPELPASDYLNVATDDCTSLLVFPDPPDLS 860

Query: 235 KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
           + S T ++ + ++     +    S+++  LE   +  H    V+PGSEIP+WF  Q+ G 
Sbjct: 861 RFSLTAVNCLSTVGNQDASYYLYSVIKRLLEETPSSFHFHKFVIPGSEIPEWFNNQSVGD 920

Query: 295 SITVTRPSYLCNMNQVVGYAACR 317
            +T   PS  CN   +  Y   R
Sbjct: 921 RVTEKLPSDACNSKWIGPYWKRR 943


>gi|332330343|gb|AEE43929.1| TIR-NBS-LRR resistance protein muRdr1E [Rosa multiflora]
          Length = 1143

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 231/512 (45%), Gaps = 87/512 (16%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 654  LEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKL 712

Query: 63   ENLLETVGQV------------------------ESLEELDISGTAIRCPPSSIFLMKNL 98
            + + E  GQ                         ESL ELD+SG  IR  P S+FL +NL
Sbjct: 713  KKIPEFEGQTNRLSNLSLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNL 772

Query: 99   KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
               SF               FP    R+S      +L  L     L  L L+DC L EG 
Sbjct: 773  IVSSFG-------------LFP----RKSPHPLIPLLAPLKHFSCLRTLKLNDCNLCEGE 815

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            IP+DIG+L SL+ L L  NNFV+LPASI  L  L    +++CKRLQ LP+L       R 
Sbjct: 816  IPNDIGSLSSLRRLELGGNNFVSLPASIYLLSKLTNFNVDNCKRLQQLPELSAKDVLPRS 875

Query: 219  NGCASLVTLLGALKL-RKSSCTIIDFVDSLKLLGKNGLA---ISMLREFLEVVS------ 268
            + C  L        L R ++   ++ V+ L ++G    +    S+L+ ++EV+S      
Sbjct: 876  DNCTYLQLFPDPPDLCRITTNFWLNCVNCLSMVGNQDASYFLYSVLKRWIEVLSRCDMMV 935

Query: 269  -------APSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHV 321
                    P     +V+PGSEIP+WF  Q+ G  +T   PS  CN ++ +G+A C +   
Sbjct: 936  HMQETHRRPLKSLELVIPGSEIPEWFNNQSVGDRVTEKLPSDECN-SKCIGFAVCALIVP 994

Query: 322  PKHSTGI-----------RRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCN 370
            P + + +           R + R+ +    LH  +        SDHL LL L        
Sbjct: 995  PDNPSAVPEDPHIDPDTCRIWCRWNNYGIGLH-GVGVSVKQFVSDHLCLLVLLS------ 1047

Query: 371  VKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTS 430
              +    N   ++F+ E  +    G    +KVK+CG    Y H+ EE      Q ++ +S
Sbjct: 1048 -PFRKPENCLEVNFVFEITR--AVGYNVCMKVKKCGVRALYEHDTEELISKMNQ-SKSSS 1103

Query: 431  YNLNEFHHDFVGSNMAVAK----ANGSGCCDD 458
             +L E   D     M  AK     +GSG  DD
Sbjct: 1104 ISLYEEGMDEQEGVMVKAKQEAATSGSGGSDD 1135


>gi|332330345|gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 234/508 (46%), Gaps = 80/508 (15%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 647  LEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKTLPSEVN-MEFLETFDVSGCSKL 705

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGCNGPPSSASCYLP--- 118
            + + E VGQ + L +L + GTA+   PSSI  L ++L  L   G        S +L    
Sbjct: 706  KMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNV 765

Query: 119  -------FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   FP    R+S      +L SL    SL +L+L+DC L EG IP+DIG+L SL+ 
Sbjct: 766  IASSLGLFP----RKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLEC 821

Query: 172  LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGA 230
            L L  NNFV+LPASI+ L  L  + +E+CKRLQ LP+LP +   +V    C SL      
Sbjct: 822  LELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPELPVSGSLRVTTVNCTSLQVF--- 878

Query: 231  LKLRKSSCTIIDF----VDSLKLLGKNGLAI---SMLREFLEVVSAP------------- 270
             +L    C +  F    V+ L  +G    +    S++   LEV+S               
Sbjct: 879  PELPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLEVISLSLSLSLSLSLSLSL 938

Query: 271  --------SHKF-SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHV 321
                    S +F + ++PGSEIP+WF  Q+ G S+T   P   CN ++ +G+A C +   
Sbjct: 939  SRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKLPWDACN-SKWIGFAVCALIVP 997

Query: 322  PKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRG------------SDHLWLLYLP---RQS 366
              + + +           ++ C+    +G  G            SDHLWLL LP   R+ 
Sbjct: 998  QDNPSAVPEDPDLDPDTCLISCNWS-NYGINGVVGRGLCVRQFDSDHLWLLVLPSPFRKP 1056

Query: 367  YYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWT 426
              C              F   R      G+   +KVK+CG    Y  + EE      Q +
Sbjct: 1057 KNC--------REVNFVFQTAR----AVGNNRCMKVKKCGVRALYEQDTEELISKMNQ-S 1103

Query: 427  RFTSYNLNEFHHDFVGSNMAVAKANGSG 454
            + +S +L E   D     M  A  +GSG
Sbjct: 1104 KSSSVSLYEEAMDEQEGAMVKAATSGSG 1131


>gi|408537078|gb|AFU75192.1| nematode resistance-like protein, partial [Solanum tuberosum subsp.
           andigenum]
          Length = 307

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 141/228 (61%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +NL + +G +  LE+L  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 NLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL +LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSIGVNFQNLSGLCSLIRLDLSDCDISDGGILSNLGFLSSLEVLLLDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ L L  C+RL+SLP+LPP+++ +  NGC SL+++
Sbjct: 243 NIPAASISRLTRLKGLALRGCRRLESLPELPPSIKNIAANGCTSLMSI 290


>gi|224105385|ref|XP_002333825.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838630|gb|EEE76995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 920

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/269 (41%), Positives = 153/269 (56%), Gaps = 37/269 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 658 MNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 717

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + + E +G+VESLEE D+SGT+IR  P+SIFL+KNLK LS  GC              
Sbjct: 718 ELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAK--------- 768

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                         LPS SGL  L           EGA+P DIG   SL++L LS+NNF 
Sbjct: 769 --------------LPSYSGLCYL-----------EGALPEDIGYSSSLRSLDLSQNNFG 803

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP SIN L  LE L L+DC+ L+SLP++P  V+ V +NGC  L  +   ++L  S  + 
Sbjct: 804 SLPKSINQLSELEMLVLKDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIELSSSKISE 863

Query: 241 IDFVDSLKLLGKNG---LAISMLREFLEV 266
              ++ L+L   NG   + ++ML  +L+V
Sbjct: 864 FICLNCLELYDHNGQDSMGLTMLERYLQV 892



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 36/253 (14%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN--LVRLPSNI-NSLKSLK-----T 53
           E +  + LD   IKE   +++  S + +L L    N  L   P  + N L+ L+     +
Sbjct: 473 EKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKIHNVQLSEGPEALSNELRFLEWNSYPS 532

Query: 54  LNLLGCFKFENLLETVGQVESLEEL-------------DISGTA--IRCPPSSIFLMKNL 98
            +L  CF+ + L+E      S+E+L             ++S +   I+ P  +  L  NL
Sbjct: 533 KSLPACFQMDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLTGIL--NL 590

Query: 99  KTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
           ++L   GC       PS A       +NL++  S     +LP+   + SL    L  C  
Sbjct: 591 ESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKS---IRILPNNLEMESLKVCTLDGCSK 647

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPP 211
            E   P  +GN++ L  L L +     L +SI+ L  L  L +  CK L+S+P       
Sbjct: 648 LE-KFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLK 706

Query: 212 NVEKVRVNGCASL 224
           +++K+ ++GC+ L
Sbjct: 707 SLKKLDLSGCSEL 719


>gi|408537068|gb|AFU75187.1| nematode resistance-like protein, partial [Solanum commersonii]
          Length = 307

 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/228 (44%), Positives = 141/228 (61%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P SIE LSG+  + L  C +L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELCLGATALSEIPASIENLSGVGVINLSYCNHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSSI L+KNLK LS  GCN         L   
Sbjct: 131 KLKNLPDDLGFLVGLEELHCTHTAIQTIPSSISLLKNLKHLSLSGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL +LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L++LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPAASISHLTRLKRLKLHSCGRLESLPELPPSIKVIHANECTSLMSI 290



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SI  L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  TA+   P+SI  +  +  ++   CN   S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELCLGATALSEIPASIENLSGVGVINLSYCNHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C   +  +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLDVSGCSKLKN-LPDDLGFLVGLEELHCTHTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           SI+ L NL+ L L  C  L S      + +K       +L  L   ++L  S C I D  
Sbjct: 161 SISLLKNLKHLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCNISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL++L  NG
Sbjct: 221 ILSNLGFLPSLEILILNG 238


>gi|163914237|dbj|BAF95888.1| N-like protein [Nicotiana tabacum]
          Length = 1165

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/312 (38%), Positives = 160/312 (51%), Gaps = 30/312 (9%)

Query: 14   IKEMPLS-IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            I+E+P S  +  + + +L L G +NLV LPS+I  LKSL  LN+ GC K E+L E +G +
Sbjct: 735  IRELPSSYFQYQTHITKLDLSGIRNLVALPSSICRLKSLVRLNVWGCPKLESLPEEIGDL 794

Query: 73   ESLEELDISGTAIRCPPSSIFLMKNLKTLSFR--GCNGPPSSASCYLPFPINLMRRSSDL 130
            ++LEELD   T I  PPSSI  +  LK LSF   G +G       +  FP          
Sbjct: 795  DNLEELDAKCTLISRPPSSIVRLNKLKILSFSSFGYDG------VHFEFP---------- 838

Query: 131  GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
                 P   GL SL  LDLS C L +G +P DIG+L SLK L L  NNF  LP SI  L 
Sbjct: 839  -----PVAEGLHSLEHLDLSYCNLIDGGLPEDIGSLSSLKELCLDGNNFEHLPRSIAQLG 893

Query: 191  NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI-IDFV--DSL 247
             L+ L L DCKRL  LP+L P +  + V+   +L      +  RK    + +D    DS+
Sbjct: 894  ALQILDLSDCKRLTQLPELHPGLNVLHVDCHMALKFFRDLVTKRKKLQRVGLDDAHNDSI 953

Query: 248  KLLGKNGL--AISMLR-EFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYL 304
              L  + L   IS LR +     S     FSIV P  +IP WF +Q   SS++   P   
Sbjct: 954  YNLFAHALFQNISSLRHDIFASDSLSESVFSIVHPWKKIPSWFHHQGRDSSVSANLPKNW 1013

Query: 305  CNMNQVVGYAAC 316
               ++ +G+A C
Sbjct: 1014 YIPDKFLGFAVC 1025


>gi|408537064|gb|AFU75185.1| nematode resistance-like protein, partial [Solanum bukasovii]
          Length = 307

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/228 (44%), Positives = 142/228 (62%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +NL + +G +  LE+L  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 NLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL DC RL+SLP+LPP+++++  N C SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKQITANECTSLMSI 290



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T++   P+S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C      +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLDVSGCS-NLKNLPDDLGLLVGLEKLHCTHTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL++L L  C  L S      + +K       +L  L   + L  S C+I D  
Sbjct: 161 SMSLLKNLKRLSLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL+LL  NG
Sbjct: 221 ILSNLGFLPSLELLILNG 238


>gi|399920209|gb|AFP55556.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1117

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 235/498 (47%), Gaps = 62/498 (12%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L    L+ C+++  LPS +  ++ L+TL++ GC K 
Sbjct: 631  LEKLILEGCTNLVDIHPSIALLKRLKIWNLRNCQSIKSLPSEV-YMEFLETLDVTGCSKL 689

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            + + + + + + L +L +SGTA+   PS   L ++L  L   G        S +L   + 
Sbjct: 690  KMIPKFMQKTKRLSKLSLSGTAVEKLPSIEQLSESLVELDLSGVVRRERPYSLFLQQILG 749

Query: 123  LM------RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
            +       R+S      +L SL    SLT+L L+DC L EG +P+DIG+L SL  L L  
Sbjct: 750  VSSFGLFPRKSPHPLIPLLASLKHFSSLTELYLNDCNLSEGELPNDIGSLSSLVRLELRG 809

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
            NNFV+LPASI+ L  L +  +E+CKRLQ LP+L  N    R + C SL    G    R +
Sbjct: 810  NNFVSLPASIHLLSKLRRFNVENCKRLQQLPELWANDVLSRTDNCTSLQLFFG----RIT 865

Query: 237  SCTIIDFVDSLKLLGKNG---LAISMLREFLEVV---------------SAPSHKFSIVV 278
            +   ++ V+ L ++G      L  S+L+ ++E+                  P      V+
Sbjct: 866  THFWLNCVNCLSMVGNQDVSYLLYSVLKRWIEIQVLSRCDMTVHMQETHRRPLEYLDFVI 925

Query: 279  PGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHP 337
            PGSEIP+WF  Q+ G  +T    P   CN ++ +G+A C +     + + +         
Sbjct: 926  PGSEIPEWFNNQSVGDRVTEKLLPWDACN-SKWIGFAVCALIVPQDNPSAVPEDPLLDPD 984

Query: 338  AHVLHCSMD---EKFGHRG-------SDHLWLLYLP---RQSYYCNVKWHFESNHFRLSF 384
              ++ C+ +    K G  G       SDHL L+ LP   R    C      E+N F   F
Sbjct: 985  TCLISCNWNYYGTKLGGVGICVKQFVSDHLSLVVLPSPLRTPENC-----LEAN-FVFKF 1038

Query: 385  MDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSN 444
            +         GS   +KVK+CG    Y  + EE      Q ++ +S +L E   D     
Sbjct: 1039 IR------AVGSKRCMKVKKCGVRALYGDDREELISKMNQ-SKSSSISLYEEGMDEQDGA 1091

Query: 445  MAVAK----ANGSGCCDD 458
            M  AK     +GSG  DD
Sbjct: 1092 MVKAKQEAATSGSGGSDD 1109


>gi|224126739|ref|XP_002329461.1| predicted protein [Populus trichocarpa]
 gi|222870141|gb|EEF07272.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 208/431 (48%), Gaps = 51/431 (11%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   + E+  SI  L  LV + LK CK L+RLPS+   LKS++ L L GC KF+ L E
Sbjct: 89  LKDCRSLVEVHHSIGYLDRLVLVNLKDCKQLMRLPSSFWKLKSIEILYLSGCSKFDELPE 148

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM--- 124
            +G +ESL  L    TAIR  PS+I  +KNL+ LS  GC G  S+      FP  LM   
Sbjct: 149 DLGDLESLTVLHADDTAIRQVPSTIVRLKNLQDLSLCGCKGSTSAT-----FPSRLMSWF 203

Query: 125 --RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
             R+  +   L+ PS  GL  LT L LSDC L + A+P D+G+L SL  L L +N+F +L
Sbjct: 204 LPRKIPNPTNLLPPSFHGLNRLTSLLLSDCNLSDDALPRDLGSLPSLTKLELDRNSFQSL 263

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLG---ALKLRKSSCT 239
           PA ++ L  L+ L+L+D  RLQ++P LP N++ +    C SL  L     A ++R     
Sbjct: 264 PAGLSSLLRLKSLRLDDNTRLQTIPALPRNLDVLHALNCTSLERLSDISVASRMR----- 318

Query: 240 IIDFVDSLKLLGKNGL----AISMLR-----EFLEVVSAPSHKFSI---VVPGSEIPKWF 287
           ++   +  KL+   GL    +IS +      +    +    HK  I   V+PG+EIP  F
Sbjct: 319 LLYIANCPKLIEAPGLDKSRSISHIDMEGCYDISNTLKNSMHKGCISGLVLPGNEIPALF 378

Query: 288 MYQNEGSSITVTRPSYLCNMNQVVGYAACRV--FHVPKHSTG-IR-RFYRYPHPAHVLHC 343
            Y+NEG+SI    P +  +   + G   C V   H+ K  T  IR +   Y         
Sbjct: 379 NYKNEGASILFKLPEF--DGRNLNGMNVCIVCSSHLEKEETKQIRIKLTNYTKGFTKKFR 436

Query: 344 SMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
           ++         DHLW             + H  +N F+L   DE E          + VK
Sbjct: 437 AVAVNLVKSCEDHLW-------------QGHISNNFFKLGSEDEVE--LIVDCMNTMTVK 481

Query: 404 RCGFHPGYMHE 414
           + G +  Y  +
Sbjct: 482 KTGVYLVYEQD 492


>gi|296081111|emb|CBI18305.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/227 (44%), Positives = 141/227 (62%), Gaps = 3/227 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L+ELLLD T I+ +P SI+ L  LV L L+ CKNLV LP  + +L SL+TL + GC 
Sbjct: 72  MENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCS 131

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSSASCYLPF 119
           +  NL + +G ++ L +    GTAI  PP SI L++NLK L + GC    P+S      F
Sbjct: 132 QLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSLFSF 191

Query: 120 PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            + L R  S+  +L LPS  S   S T LDLSDC L EGAIP+ I +L SLK L LS+N+
Sbjct: 192 WL-LHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSRND 250

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
           F++ PA I+ L +L+ L+L   + L  +P+LPP+V  +  + C +L+
Sbjct: 251 FLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTALL 297



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 102/204 (50%), Gaps = 25/204 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L EL L  T I+E+P S+E L+GLV L LK CKNL  LP+++  L+SL+ L   GC 
Sbjct: 1   MEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCS 60

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K EN  E +  +E+L+EL + GT+I   PSSI  +K L  L+ R C              
Sbjct: 61  KLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCK------------- 107

Query: 121 INLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
            NL+          LP  +  L SL  L +S C      +P ++G+L  L   +      
Sbjct: 108 -NLVS---------LPKGMCTLTSLETLIVSGCS-QLNNLPKNLGSLQHLAQPHADGTAI 156

Query: 180 VTLPASINCLFNLEKLKLEDCKRL 203
              P SI  L NL+ L    CKRL
Sbjct: 157 TQPPDSIVLLRNLKVLIYPGCKRL 180



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 43/241 (17%)

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +E L EL ++ TAI   PSS+  +  L  L  + C    S     LP             
Sbjct: 1   MEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKS-----LP------------- 42

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
                S+  L SL  L  S C   E   P  + ++ +LK L L   +   LP+SI+ L  
Sbjct: 43  ----TSVCKLESLEYLFPSGCSKLEN-FPEMMEDMENLKELLLDGTSIEGLPSSIDRLKV 97

Query: 192 LEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGAL----KLRKSSCTII 241
           L  L L +CK L SLP+      ++E + V+GC+ L  L   LG+L    +       I 
Sbjct: 98  LVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAIT 157

Query: 242 DFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRP 301
              DS          I +LR    ++     + +    GS    W +++N  + I++  P
Sbjct: 158 QPPDS----------IVLLRNLKVLIYPGCKRLAPTSLGSLFSFWLLHRNGSNGISLRLP 207

Query: 302 S 302
           S
Sbjct: 208 S 208


>gi|147821054|emb|CAN77694.1| hypothetical protein VITISV_029044 [Vitis vinifera]
          Length = 1530

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 148/444 (33%), Positives = 216/444 (48%), Gaps = 65/444 (14%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            +D+KE+P+ IE  S L  L L+ CK L  LPS+I   KSL TL+  GC + E+  E +  
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS-----------SASC- 115
            +   ++LD+ GTAI+  PSSI  ++ L+ L+   C    N P S             SC 
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 116  -YLPFPINLMRRSS-------DLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
                 P NL R  S       DL ++   LPSLSGL SL  L L +CGL E  IPS I +
Sbjct: 1227 KLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLRE--IPSGIWH 1284

Query: 166  LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
            L SL+ L L  N F ++P  IN L+NL    L  C+ LQ +P+LP ++E +  + C+SL 
Sbjct: 1285 LSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSLE 1344

Query: 226  TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IP 284
             L     L  SS  +     S ++  +    +  ++EF EV    + K  + +PGS  IP
Sbjct: 1345 ILSSPSTLLWSS--LFKCFKS-RIQRQKIYTLLSVQEF-EV----NFKVQMFIPGSNGIP 1396

Query: 285  KWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR----YPHPAHV 340
             W  +Q  GS IT+  P Y    +  +G+A C + HVP       R ++    + + A +
Sbjct: 1397 GWISHQKNGSKITMRLPRYWYENDDFLGFALCSL-HVPLDIEEENRSFKCKLNFNNRAFL 1455

Query: 341  LHCSMDEKFGHRG---------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKH 391
            L   +D+ +  R          S+ +WL+Y P+      +   + SN +R       E  
Sbjct: 1456 L---VDDFWSKRNCERCLHGDESNQVWLIYYPKSK----IPKKYHSNEYRTLNTSFSEYF 1508

Query: 392  CPAGSGTG-LKVKRCGFHPGYMHE 414
                 GT  +KV+RCGFH  Y  E
Sbjct: 1509 -----GTEPVKVERCGFHFIYAQE 1527



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 139/292 (47%), Gaps = 32/292 (10%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC  L  LP  I   K L+TL+  GC K +   E  G +  L ELD+SGTAI+  P
Sbjct: 670 LTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLP 729

Query: 90  SSIFL-MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD 148
           SS+F  +K L+ LSFR                      SS L  + +  +  L SL  LD
Sbjct: 730 SSLFEHLKALEILSFR---------------------MSSKLNKIPI-DICCLSSLEVLD 767

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           LS C + EG IPSDI +L SLK L L  N+F ++PA+IN L  L+ L L  C+ LQ +P+
Sbjct: 768 LSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPE 827

Query: 209 LPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVS 268
           LP ++  +  +G     +    L +          +  L    +N +          V +
Sbjct: 828 LPSSLRLLDAHGSNPTSSRASFLPVHSLVNCFNSEIQDLNCSSRNEVWSEN-----SVST 882

Query: 269 APSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
             S    IV+PGS  +P+W M   +   I    P      N+ +G+A C V+
Sbjct: 883 YGSKGICIVLPGSSGVPEWIM---DDQGIATELPQNWNQNNEFLGFALCCVY 931


>gi|408537102|gb|AFU75204.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 138/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LE+L  + TAI   PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL +LDLSDC + +G I S++G L SLK L L  NNF 
Sbjct: 183 VSSSSHGRKSMGVNFQNLSGLCSLIRLDLSDCDISDGGILSNLGFLSSLKVLLLDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ L L  C RL+SLP+LPP++  +  + C SL+++
Sbjct: 243 NIPAASISRLTRLKSLALRGCGRLESLPELPPSITGIYAHDCTSLMSI 290


>gi|332330340|gb|AEE43926.1| TIR-NBS-LRR resistance protein muRdr1B [Rosa multiflora]
          Length = 1157

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 232/518 (44%), Gaps = 90/518 (17%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ ++  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 653  LEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKTLPSEVN-MEFLETFDVSGCSKL 711

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGCNGPPSSASCYLP--- 118
            + + E VGQ + L +L + GTA+   PSSI  L ++L  L   G        S +L    
Sbjct: 712  KMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNV 771

Query: 119  -------FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   FP    R+S      +L SL    SL +L+L+DC L EG IP+DIG+L SL+ 
Sbjct: 772  IASSLGLFP----RKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLEC 827

Query: 172  LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGA 230
            L L  NNFV+LPASI+ L  L  + +E+CKRLQ LP+LP +   +V    C SL      
Sbjct: 828  LELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPELPVSGSLRVTTVNCTSLQVF--- 884

Query: 231  LKLRKSSCTIIDF----VDSLKLLGKNGLAI---SMLREFLEVVSAP------------- 270
             +L    C +  F    V+ L  +G    +    S++   LEV                 
Sbjct: 885  PELPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLEVTYVTYVRSLSLSLSLSL 944

Query: 271  ------------------SHKF-SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVV 311
                              S +F + ++PGSEIP+WF  Q+ G S+T   P   CN ++ +
Sbjct: 945  SLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKLPWDACN-SKWI 1003

Query: 312  GYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRG------------SDHLWL 359
            G+A C +     + + +           ++ C+    +G  G            SDHLWL
Sbjct: 1004 GFAVCALIVPQDNPSAVPEDPDLDPDTCLISCNWS-NYGINGVVGRGLCVRQFDSDHLWL 1062

Query: 360  LYLP---RQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVE 416
            L LP   R+   C              F   R      G+   +KVK+CG    Y  + E
Sbjct: 1063 LVLPSPFRKPKNC--------REVNFVFQTAR----AVGNNRCMKVKKCGVRALYEQDTE 1110

Query: 417  EFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSG 454
            E      Q ++ +S +L E   D     M  A  +GSG
Sbjct: 1111 ELISKMNQ-SKSSSVSLYEEAMDEQEGAMVKAATSGSG 1147


>gi|296081089|emb|CBI18283.3| unnamed protein product [Vitis vinifera]
          Length = 1183

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 212/444 (47%), Gaps = 76/444 (17%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            +D+KE+P+ IE  S L  L L+ CK L  LPS+I   KSL TL+  GC + E+  E +  
Sbjct: 772  SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 830

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS-----------SASC- 115
            +   ++LD+ GTAI+  PSSI  ++ L+ L+   C    N P S             SC 
Sbjct: 831  MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 890

Query: 116  -YLPFPINLMRRSS-------DLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
                 P NL R  S       DL ++   LPSLSGL SL  L L +CGL E  IPS I +
Sbjct: 891  KLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLRE--IPSGIWH 948

Query: 166  LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
            L SL+ L L  N F ++P  IN L+NL    L  C+ LQ +P+LP ++E +  + C+SL 
Sbjct: 949  LSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSLE 1008

Query: 226  TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IP 284
             L     L  SS          K         S ++EF EV    + K  + +PGS  IP
Sbjct: 1009 ILSSPSTLLWSS-----LFKCFK---------SRIQEF-EV----NFKVQMFIPGSNGIP 1049

Query: 285  KWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR----YPHPAHV 340
             W  +Q  GS IT+  P Y    +  +G+A C + HVP       R ++    + + A +
Sbjct: 1050 GWISHQKNGSKITMRLPRYWYENDDFLGFALCSL-HVPLDIEEENRSFKCKLNFNNRAFL 1108

Query: 341  LHCSMDEKFGHRG---------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKH 391
            L   +D+ +  R          S+ +WL+Y P+      +   + SN +R       E  
Sbjct: 1109 L---VDDFWSKRNCERCLHGDESNQVWLIYYPKS----KIPKKYHSNEYRTLNTSFSEYF 1161

Query: 392  CPAGSGTG-LKVKRCGFHPGYMHE 414
                 GT  +KV+RCGFH  Y  E
Sbjct: 1162 -----GTEPVKVERCGFHFIYAQE 1180



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 119/255 (46%), Gaps = 32/255 (12%)

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFL-MKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
           E  G +  L ELD+SGTAI+  PSS+F  +K L+ LSFR                     
Sbjct: 371 EIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFR--------------------- 409

Query: 126 RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            SS L  + +  +  L SL  LDLS C + EG IPSDI +L SLK L L  N+F ++PA+
Sbjct: 410 MSSKLNKIPI-DICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPAT 468

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
           IN L  L+ L L  C+ LQ +P+LP ++  +  +G     +    L +          + 
Sbjct: 469 INQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSNPTSSRASFLPVHSLVNCFNSEIQ 528

Query: 246 SLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYL 304
            L    +N +          V +  S    IV+PGS  +P+W M   +   I    P   
Sbjct: 529 DLNCSSRNEVWSEN-----SVSTYGSKGICIVLPGSSGVPEWIM---DDQGIATELPQNW 580

Query: 305 CNMNQVVGYAACRVF 319
              N+ +G+A C V+
Sbjct: 581 NQNNEFLGFALCCVY 595


>gi|359495274|ref|XP_002276409.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1135

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 143/412 (34%), Positives = 199/412 (48%), Gaps = 62/412 (15%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+ +L+ L  L+LK C+ L  LPS++  LKSL+T  L GC + E+  E  G +E L+EL 
Sbjct: 676  SLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELH 735

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
              G  +R  PSS  L++NL+ LSF+GC GPPS+ S  LP      RRSS     +L  LS
Sbjct: 736  ADGIPVRVLPSSFSLLRNLEILSFKGCRGPPST-SWLLP------RRSSSSTGSILHHLS 788

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            GL SLT+L+L  C L +    S +  L SL+ L LS NNFVTLP +I  L +LE L LE 
Sbjct: 789  GLYSLTRLNLGYCNLSDETNLSSLCLLSSLEVLGLSGNNFVTLP-NIRGLSSLEGLLLEK 847

Query: 200  CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISM 259
            CKRLQ LP+LP ++  +    C SL                               +  +
Sbjct: 848  CKRLQILPELPSSIYSLIAQDCISL----------------------------ENASNQV 879

Query: 260  LREFLEVVSAP---------SHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQV 310
            L+       +P         +H   ++V GS IP W  YQ+ G  +    P    N N +
Sbjct: 880  LKSLFPTAKSPKKTFKCNSGAHLIYVMVYGSRIPDWIRYQSSGCEVEADLPPNWYNSN-L 938

Query: 311  VGYAACRVFHVPKHSTGIRRFY--RYPHPAHVLH-CSMDEKFGHRGSDHLWLLY--LPRQ 365
            +G A   V +V   +  I   Y  RY   +++ +  S+       G DH+WLLY  LP  
Sbjct: 939  LGLALSFVTYVFASNVIIPVSYTLRYSTSSYIANRISIRCDKEGVGLDHVWLLYIKLPLF 998

Query: 366  SYYCN---VKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE 414
            S + N   + WH E  H  +SF  +     P        +KRCGF   Y ++
Sbjct: 999  SNWHNGTPINWH-EVTHISVSFGTQVMGWYPP-------IKRCGFDLVYSND 1042


>gi|408537072|gb|AFU75189.1| nematode resistance-like protein, partial [Solanum etuberosum]
          Length = 307

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/228 (46%), Positives = 144/228 (63%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL DC RL+SLP+LPP+++K+  NGC SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 290



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T++   P+S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C   +  +P D+G L  L+ L  +      +P+
Sbjct: 117 R---------------LKCLKTLDVSGCSKLKN-LPDDLGLLVGLEELQCTHTAIQKIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL+ L L  C  L S      + +K       +L  L   + L  S C+I D  
Sbjct: 161 SMSLLKNLKHLSLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL+LL  NG
Sbjct: 221 ILSNLGFLPSLELLILNG 238


>gi|408537080|gb|AFU75193.1| nematode resistance-like protein, partial [Solanum bukasovii f.
           multidissectum]
          Length = 307

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/228 (46%), Positives = 144/228 (63%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL DC RL+SLP+LPP+++K+  NGC SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 290



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T++   P+S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C   +  +P D+G L  L+ L  +      +P+
Sbjct: 117 R---------------LKCLKTLDVSGCSKLKN-LPDDLGLLVGLEELQCTHTAIQKIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL+ L L  C  L S      + +K       +L  L   + L  S C+I D  
Sbjct: 161 SMSLLKNLKHLSLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL+LL  NG
Sbjct: 221 ILSNLGFLPSLELLILNG 238


>gi|332330339|gb|AEE43925.1| TIR-NBS-LRR resistance protein muRdr1A [Rosa multiflora]
          Length = 1119

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 180/355 (50%), Gaps = 55/355 (15%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L+  T++ E+  SI LL  L    L+ C ++  LPS +N ++ L+T ++ GC K 
Sbjct: 652 LEKLILEGCTNLVEIHPSIALLKRLRIWNLRNCTSIKSLPSEVN-MEFLETFDVSGCSKL 710

Query: 63  ENLLETVGQV------------------------ESLEELDISGTAIRCPPSSIFLMKNL 98
           + + E VGQ                         ESL ELD++GT IR  P S+FL +NL
Sbjct: 711 KMIPEFVGQTKRLSKFCLGGTAVEKLPSSIELLPESLVELDLNGTVIREQPHSLFLKQNL 770

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
              SF                  +  R+S      ++ SL  L  LT L L+DC L EG 
Sbjct: 771 IVSSFG-----------------SFRRKSPQPLIPLIASLKHLSFLTTLKLNDCNLCEGE 813

Query: 159 IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVR 217
           IP+DIG+L SL+ L L  NNFV+LPASI+ L  L  + +E+CKRLQ LP+LP     +V 
Sbjct: 814 IPNDIGSLSSLEKLELRGNNFVSLPASIHLLSKLYFINVENCKRLQQLPELPARQSLRVT 873

Query: 218 VNGCASLVTLLGALKLRK--SSCTIIDF----VDSLKLLGKNGLA---ISMLREFLEVVS 268
            N C SL          +  +  T  +F    V+ L  +G    +    S+L+ ++E  +
Sbjct: 874 TNNCTSLQVFPDPQVFPEPPNLSTPWNFSLISVNCLSAVGNQDASYFIYSVLKRWIEQGN 933

Query: 269 APSHK-FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
             S + F  ++PGSEIP WF  Q+ G S+T   PS  CN ++ +G+A C +   P
Sbjct: 934 HRSFEFFKYIIPGSEIPDWFNNQSVGDSVTEKLPSDECN-SKWIGFAVCALIVPP 987


>gi|408537058|gb|AFU75182.1| nematode resistance-like protein, partial [Solanum acaule]
          Length = 292

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/228 (45%), Positives = 141/228 (61%), Gaps = 24/228 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN             
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCN------------- 177

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                       +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 178 ----------AGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 227

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL DC RL+SLP+LPP+++K+  NGC SL+++
Sbjct: 228 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 275


>gi|147784070|emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]
          Length = 1135

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 205/439 (46%), Gaps = 49/439 (11%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+ L+L+    ++++  S+  L  L+ L LK C+ L  LPS+   LKSL+T  L GC KF
Sbjct: 641  LKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKF 700

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +   E  G +E L+EL     AI   PSS   ++NL+ LSF+GC GP SS    LP    
Sbjct: 701  KEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFKGCKGP-SSTLWLLP---- 755

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
              RRSS+    +L  LSGL SL +L+LS+C L +    S +G L SL+ LYL  N+FVTL
Sbjct: 756  --RRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGNDFVTL 813

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----------LGALK 232
            P++I+ L NL  L LE+CKRLQ LP+LP ++  +    C SL  +           G  +
Sbjct: 814  PSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQVLKSLLPTGQHQ 873

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV-------VPGSEIPK 285
             RK    ++    +L +L  +   I            P  K  I        +PGS IP 
Sbjct: 874  KRKFMVXVVKPDTALAVLEASNXGIRXXXRASYQRIBPVVKLGIAXXALKAFIPGSRIPD 933

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV--------FHVPKHSTGIRRFYRYPHP 337
            W  YQ+ GS +    P    N N  +G+A   V        F +                
Sbjct: 934  WIRYQSSGSEVKAELPPNWFNSN-FLGFAFSFVTCGHFSCLFMLKADVLFDWTSRDDSSS 992

Query: 338  AHVLHCSMDEKFGHRGSDHLWLLYLPR-QSYYCNVKWHFESNHFRLSFMDEREKHCPAGS 396
              ++   M         DH+ L Y+P  Q   C+     +  H ++SFM        A S
Sbjct: 993  VDIIIVEMISFKRRLEXDHVCLCYVPLPQLRNCS-----QVTHIKVSFM--------AVS 1039

Query: 397  GTG-LKVKRCGFHPGYMHE 414
              G +++KRCG    Y +E
Sbjct: 1040 REGEIEIKRCGVGXVYSNE 1058


>gi|45544513|dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 158/311 (50%), Gaps = 29/311 (9%)

Query: 14   IKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            I+E+P SI +  + + +L L   KNLV LPS+I  LKSL +L++ GC K E+L E +G +
Sbjct: 716  IRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDL 775

Query: 73   ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            ++L   D S T I  PPSSI  +  L  L FRG          +  FP            
Sbjct: 776  DNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKD-----GVHFEFP------------ 818

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
               P   GL SL  L+LS C L +G +P DIG+L SLK L LS+NNF  LP+SI  L  L
Sbjct: 819  ---PVAEGLHSLEYLNLSYCNLIDGGLPEDIGSLSSLKKLDLSRNNFEHLPSSIAQLGAL 875

Query: 193  EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK 252
            + L L+DC+RL  LP+LPP + ++ V+ C   +  +  L  ++     +   D+      
Sbjct: 876  QSLDLKDCQRLTQLPELPPELNELHVD-CHMALKFIHDLVTKRKKLHRVKLDDAHNDTMY 934

Query: 253  NGLAISMLREFLEV---VSAPSHKFSIVVPGS----EIPKWFMYQNEGSSITVTRPSYLC 305
            N  A +M +    +   +SA       V  G     +IP WF +Q   SS++V  P    
Sbjct: 935  NLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYPEKIPSWFHHQGWDSSVSVNLPENWY 994

Query: 306  NMNQVVGYAAC 316
              ++ +G+A C
Sbjct: 995  IPDKFLGFAVC 1005


>gi|224145030|ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1435

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/348 (34%), Positives = 171/348 (49%), Gaps = 39/348 (11%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            +REL LD T I+E+P SIE L  L +L L+ CK    LPS+I  LK L+ LNL GC +F 
Sbjct: 869  IRELYLDGTAIREIPSSIECLCELNELHLRNCKQFEILPSSICKLKKLRRLNLSGCLQFR 928

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            +  E +  +  L  L +  T I   PS I  +K L  L    C        C++   ++ 
Sbjct: 929  DFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCKYL-EDIHCFVGLQLSK 987

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
              R              L  L KL+L  C L E  +P  +G L SL+ L LS NN  T+P
Sbjct: 988  RHRVD------------LDCLRKLNLDGCSLSE--VPDSLGLLSSLEVLDLSGNNLRTIP 1033

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID- 242
             SIN LF L+ L L +CKRLQSLP+LPP + K+ V+ C SL  L+        S T+++ 
Sbjct: 1034 ISINKLFELQYLGLRNCKRLQSLPELPPRLSKLDVDNCQSLNYLVS------RSSTVVEG 1087

Query: 243  ------FVDSLKLLGKNG-LAISML-------REFLEVVSAPSHKFSIVVPGSEIPKWFM 288
                  F + L+L   N  L  S+L       R + ++   P    S  +PG   P+WF 
Sbjct: 1088 NIFEFIFTNCLRLPVVNQILEYSLLKFQLYTKRLYHQLPDVPEGACSFCLPGDVTPEWFS 1147

Query: 289  YQNEGSSITVTRPSYLCNMNQVVGYAACRV--FHVPKHSTGIRRFYRY 334
            +Q+ GS  T    S+  N ++ +G++ C V  F    HS  ++  Y +
Sbjct: 1148 HQSWGSIATFQLSSHWVN-SEFLGFSLCAVIAFRSISHSLQVKCTYHF 1194



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 108/222 (48%), Gaps = 34/222 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L L++T ++E+P SI  LSGLV L LK CK ++ LP NI  LKSL  +++ GC    
Sbjct: 733 LTYLNLNETAVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLLIVDISGCSSIS 792

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
              +    +  L    ++GTAI   PSSI  ++ L  L   GCN   +            
Sbjct: 793 RFPDFSWNIRYLY---LNGTAIEELPSSIGGLRELIYLDLVGCNRLKN------------ 837

Query: 124 MRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                      LPS +S LG L KLDLS C     +I        +++ LYL       +
Sbjct: 838 -----------LPSAVSKLGCLEKLDLSGC----SSITEFPKVSRNIRELYLDGTAIREI 882

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGC 221
           P+SI CL  L +L L +CK+ + LP     ++K+R   ++GC
Sbjct: 883 PSSIECLCELNELHLRNCKQFEILPSSICKLKKLRRLNLSGC 924



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 24/216 (11%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           + P SI+ L  LV L L+GCK L+ LPS INS   L+TLNL GC   +   ET G+   L
Sbjct: 678 KFPSSIQHLDKLVDLDLRGCKRLINLPSRINS-SCLETLNLSGCANLKKCPETAGK---L 733

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
             L+++ TA+   P SI  +  L TL+ + C              +NL      L +L++
Sbjct: 734 TYLNLNETAVEELPQSIGELSGLVTLNLKNCK-----------LVLNLPENIYLLKSLLI 782

Query: 136 PSLSGLGSLTKLD--------LSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
             +SG  S+++          L   G     +PS IG L  L  L L   N    LP+++
Sbjct: 783 VDISGCSSISRFPDFSWNIRYLYLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAV 842

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           + L  LEKL L  C  +   P++  N+ ++ ++G A
Sbjct: 843 SKLGCLEKLDLSGCSSITEFPKVSRNIRELYLDGTA 878



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNIN---------SLKSL 51
            M CLR L L++T I ++P  I  L GL  L +  CK L  +   +           L  L
Sbjct: 937  MVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCKYLEDIHCFVGLQLSKRHRVDLDCL 996

Query: 52   KTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            + LNL GC     + +++G + SLE LD+SG  +R  P SI  +  L+ L  R C
Sbjct: 997  RKLNLDGC-SLSEVPDSLGLLSSLEVLDLSGNNLRTIPISINKLFELQYLGLRNC 1050



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 36/250 (14%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL L  + +K++    + L  L  + L  C+++  LP +++  ++L+ LNL  C    
Sbjct: 619 LVELNLSSSKVKQLWRGDQNLGNLKDVNLSNCEHITFLP-DLSKARNLERLNLQFCKSLV 677

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP---PSSASCYLPFP 120
               ++  ++ L +LD+ G        S      L+TL+  GC      P +A       
Sbjct: 678 KFPSSIQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNLSGCANLKKCPETAGKLTYLN 737

Query: 121 INLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSL---------- 169
           +N      +     LP S+  L  L  L+L +C L    +P +I  L SL          
Sbjct: 738 LN------ETAVEELPQSIGELSGLVTLNLKNCKLVLN-LPENIYLLKSLLIVDISGCSS 790

Query: 170 -----------KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEK 215
                      + LYL+      LP+SI  L  L  L L  C RL++LP        +EK
Sbjct: 791 ISRFPDFSWNIRYLYLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVSKLGCLEK 850

Query: 216 VRVNGCASLV 225
           + ++GC+S+ 
Sbjct: 851 LDLSGCSSIT 860



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ++CLR+L LD   + E+P S+ LLS L  L L G  NL  +P +IN L  L+ L L  C 
Sbjct: 993  LDCLRKLNLDGCSLSEVPDSLGLLSSLEVLDLSG-NNLRTIPISINKLFELQYLGLRNCK 1051

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            + ++L E   ++  L+  +          SS  +  N+    F  C
Sbjct: 1052 RLQSLPELPPRLSKLDVDNCQSLNYLVSRSSTVVEGNIFEFIFTNC 1097



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 11/103 (10%)

Query: 259  MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
             L +  E +  P+   S  +PG   P+WF +Q+ GS++T    S   N ++ +G++ C V
Sbjct: 1327 FLADHQEELDVPAWACSFCLPGDVTPEWFSHQSWGSTVTFLLSSDWAN-SEFLGFSLCVV 1385

Query: 319  --FHVPKHSTGIRRFYRYPHP---AHVLHCSM----DEKFGHR 352
              F    H   ++  Y + +    +H L+C +    DEK  HR
Sbjct: 1386 IAFCSVSHRLQVKCTYHFRNKHGDSHDLYCYLHGWYDEK-AHR 1427


>gi|359495270|ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 207/439 (47%), Gaps = 49/439 (11%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+ L+L+    ++++  S+  L  L+ L LK C+ L  LPS+   LKSL+T  L GC KF
Sbjct: 661  LKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKF 720

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +   E  G +E L+EL     AI   PSS   ++NL+ LSF+GC GP SS    LP    
Sbjct: 721  KEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGP-SSTLWLLP---- 775

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
              RRSS+    +L  LSGL SL +L+LS+C L +    S +G L SL+ LYL  N+FVTL
Sbjct: 776  --RRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGNDFVTL 833

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----------LGALK 232
            P++I+ L NL  L LE+CKRLQ LP+LP ++  +    C SL  +           G  +
Sbjct: 834  PSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQVLKSLLPTGQHQ 893

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV-------VPGSEIPK 285
             RK    ++    +L +L  +   I +          P  K  I        +PGS IP 
Sbjct: 894  KRKFMVPVVKPDTALAVLEASNPGIRIPHRASYQRIDPVVKLGIATVALKAFIPGSRIPD 953

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV--------FHVPKHSTGIRRFYRYPHP 337
            W  YQ+ GS +    P    N N  +G+A   V        F +                
Sbjct: 954  WIRYQSSGSEVKAELPPNWFNSN-FLGFAFSFVTCGHFSCLFMLKADVLFDWTSRDDSSS 1012

Query: 338  AHVLHCSMDEKFGHRGSDHLWLLYLPR-QSYYCNVKWHFESNHFRLSFMDEREKHCPAGS 396
              ++   M        +DH+ L Y+P  Q   C+     +  H ++SFM        A S
Sbjct: 1013 VDIIIVEMISFKRRLETDHVCLCYVPLPQLRNCS-----QVTHIKVSFM--------AVS 1059

Query: 397  GTG-LKVKRCGFHPGYMHE 414
              G +++KRCG    Y +E
Sbjct: 1060 REGEIEIKRCGVGVVYSNE 1078


>gi|297741024|emb|CBI31336.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 212/453 (46%), Gaps = 51/453 (11%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ L+L+    ++++  S+  L  L+ L LK C+ L  LPS+   LKSL+T  L GC KF
Sbjct: 80  LKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKF 139

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +E L+EL     AI   PSS   ++NL+ LSF+GC GP SS    LP    
Sbjct: 140 KEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGP-SSTLWLLP---- 194

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
             RRSS+    +L  LSGL SL +L+LS+C L +    S +G L SL+ LYL  N+FVTL
Sbjct: 195 --RRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGNDFVTL 252

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----------LGALK 232
           P++I+ L NL  L LE+CKRLQ LP+LP ++  +    C SL  +           G  +
Sbjct: 253 PSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQVLKSLLPTGQHQ 312

Query: 233 LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV-------VPGSEIPK 285
            RK    ++    +L +L  +   I +          P  K  I        +PGS IP 
Sbjct: 313 KRKFMVPVVKPDTALAVLEASNPGIRIPHRASYQRIDPVVKLGIATVALKAFIPGSRIPD 372

Query: 286 WFMYQNEGSSITVTRPSYLCNMN--------QVVGYAACRVFHVPKHSTGIRRFYRYPHP 337
           W  YQ+ GS +    P    N N           G+ +C +F +                
Sbjct: 373 WIRYQSSGSEVKAELPPNWFNSNFLGFAFSFVTCGHFSC-LFMLKADVLFDWTSRDDSSS 431

Query: 338 AHVLHCSMDEKFGHRGSDHLWLLYLPR-QSYYCNVKWHFESNHFRLSFMDEREKHCPAGS 396
             ++   M        +DH+ L Y+P  Q   C+     +  H ++SFM        A S
Sbjct: 432 VDIIIVEMISFKRRLETDHVCLCYVPLPQLRNCS-----QVTHIKVSFM--------AVS 478

Query: 397 GTG-LKVKRCGFHPGYMHEVEEFDETTKQWTRF 428
             G +++KRCG   G ++  E+ +       RF
Sbjct: 479 REGEIEIKRCGV--GVVYSNEDGNHNNPPMIRF 509


>gi|46577339|sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N
 gi|558887|gb|AAA50763.1| N [Nicotiana glutinosa]
          Length = 1144

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 162/319 (50%), Gaps = 29/319 (9%)

Query: 6    ELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            ++ +  + I+E+P SI +  + + +L L   KNLV LPS+I  LKSL +L++ GC K E+
Sbjct: 716  QIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLES 775

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
            L E +G +++L   D S T I  PPSSI  +  L  L FRG          +  FP    
Sbjct: 776  LPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKD-----GVHFEFP---- 826

Query: 125  RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                       P   GL SL  L+LS C L +G +P +IG+L SLK L LS+NNF  LP+
Sbjct: 827  -----------PVAEGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLSRNNFEHLPS 875

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
            SI  L  L+ L L+DC+RL  LP+LPP + ++ V+ C   +  +  L  ++     +   
Sbjct: 876  SIAQLGALQSLDLKDCQRLTQLPELPPELNELHVD-CHMALKFIHYLVTKRKKLHRVKLD 934

Query: 245  DSLKLLGKNGLAISMLREFLEV---VSAPSHKFSIVVPGS----EIPKWFMYQNEGSSIT 297
            D+      N  A +M +    +   +SA       V  G     +IP WF +Q   SS++
Sbjct: 935  DAHNDTMYNLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYPEKIPSWFHHQGWDSSVS 994

Query: 298  VTRPSYLCNMNQVVGYAAC 316
            V  P      ++ +G+A C
Sbjct: 995  VNLPENWYIPDKFLGFAVC 1013


>gi|408537088|gb|AFU75197.1| nematode resistance-like protein, partial [Solanum vernei]
          Length = 307

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/228 (45%), Positives = 143/228 (62%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL DC RL+SLP+LPP+++++  NGC SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKRITANGCTSLMSI 290



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLXTLPKRIR-LEKLEILVLTGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T++   P+S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C   +  +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLDVSGCSKLKN-LPDDLGLLVGLEELHCTHTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL+ L L  C  L S      + +K       +L  L   + L  S C+I D  
Sbjct: 161 SMSLLKNLKHLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL+LL  NG
Sbjct: 221 ILSNLGFLPSLELLILNG 238


>gi|297741023|emb|CBI31335.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/198 (48%), Positives = 125/198 (63%), Gaps = 10/198 (5%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L+LK CK L RLPS I + KSL+TL L GC KFE   E  G +E L+EL   GT +R  P
Sbjct: 698 LSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALP 757

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
            S F M+NLK LSFRGC GP S++  +        +RSS+     +PS S L  L KLDL
Sbjct: 758 PSNFSMRNLKKLSFRGC-GPASASWLW-------SKRSSNSICFTVPSSSNLCYLKKLDL 809

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           SDC + +GA    +G L SL+ L LS NNFVTLP +++ L +L  L LE+CKRLQ+LPQ 
Sbjct: 810 SDCNISDGANLGSLGFLSSLEDLNLSGNNFVTLP-NMSGLSHLVFLGLENCKRLQALPQF 868

Query: 210 PPNVEKVRVNGCASLVTL 227
           P ++E + + G  + VTL
Sbjct: 869 PSSLEDLILRG-NNFVTL 885



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 125/268 (46%), Gaps = 45/268 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L+EL  D T ++ +P S   +  L +L+ +GC      P++ + L S ++ N + CF
Sbjct: 740 LEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCG-----PASASWLWSKRSSNSI-CF 793

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPS--SIFLMKNLKTLSFRGCNGPPSSASCYLP 118
                + +   +  L++LD+S   I    +  S+  + +L+ L+  G N           
Sbjct: 794 T----VPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSSLEDLNLSGNN----------- 838

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG--AIPSDIGNLHSLKTLYLSK 176
                         + LP++SGL  L  L L +C   +     PS      SL+ L L  
Sbjct: 839 -------------FVTLPNMSGLSHLVFLGLENCKRLQALPQFPS------SLEDLILRG 879

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
           NNFVTLP +++ L +L+ L L +CKRL++LPQLP ++  +    C SL T      LR  
Sbjct: 880 NNFVTLP-NMSGLSHLKTLVLGNCKRLEALPQLPSSIRSLNATDCTSLGTTESLKLLRPW 938

Query: 237 SCTIIDFVDSLKLLGKNGLAISMLREFL 264
               +D   +  + G   L++ M R FL
Sbjct: 939 ELESLDSDVAFVIPGTTCLSLVMGRSFL 966


>gi|296089468|emb|CBI39287.3| unnamed protein product [Vitis vinifera]
          Length = 1166

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 160/313 (51%), Gaps = 41/313 (13%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+  L  L  L+LK CK L  LPS    LKSL+ L L GC KFE  LE  G +E L+EL 
Sbjct: 732  SLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEMLKELY 791

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
              GTA+R  PSS+ L +NL  LS  GC GPPS AS + P      RRSS+     L +LS
Sbjct: 792  ADGTALRELPSSLSLSRNLVILSLEGCKGPPS-ASWWFP------RRSSNSTGFRLHNLS 844

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            GL SL+ L+LS C L +    S +  L SL+ L+L  NNFVTLP +++ L  LE ++LE+
Sbjct: 845  GLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNNFVTLP-NLSRLSRLEDVQLEN 903

Query: 200  CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISM 259
            C RLQ LP LP ++  +    C SL  +   LK R                      I +
Sbjct: 904  CTRLQELPDLPSSIGLLDARNCTSLKNVQSHLKNR---------------------VIRV 942

Query: 260  LREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            L   L + +        + PGS +P W  Y++ G  +    P    N N  +G+    V 
Sbjct: 943  LNLVLGLYT--------LTPGSRLPDWIRYKSSGMEVIAELPPNWFNSN-FLGFWFAIV- 992

Query: 320  HVPKHSTGIRRFY 332
             VPK S G+ RF+
Sbjct: 993  -VPKFS-GLDRFH 1003


>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1561

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 178/361 (49%), Gaps = 31/361 (8%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            ++EL L+ T I+E+P SIE L  L +L L+ CK    LPS+I  L+ L+ LNL GC +F 
Sbjct: 855  IKELYLNGTAIREIPSSIECLFELAELHLRNCKQFEILPSSICKLRKLQRLNLSGCVQFR 914

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            +  E +  +  L  L +  T I   PS I  +K L  L    C                 
Sbjct: 915  DFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCQH--------------- 959

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
            +R    +  L LP    L  L KL+L  C + E  +P  +G + SL+ L LS NNF ++P
Sbjct: 960  LRDIECIVDLQLPERCKLDCLRKLNLDGCQIWE--VPDSLGLVSSLEVLDLSGNNFRSIP 1017

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
             SIN LF L+ L L +C+ L+SLP+LPP + K+  + C SL T+  +    + +     F
Sbjct: 1018 ISINKLFELQYLGLRNCRNLESLPELPPRLSKLDADNCWSLRTVSCSSTAVEGNIFEFIF 1077

Query: 244  VDSLKLLGKNG-LAISML-------REFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSS 295
             +  +L   N  L  S+L       R + ++   P    S  +PG   P+WF +Q+ GS 
Sbjct: 1078 TNCKRLRRINQILEYSLLKFQLYTKRLYHQLPDVPEEACSFCLPGDMTPEWFSHQSWGSI 1137

Query: 296  ITVTRPSYLCNMNQVVGYAACRV--FHVPKHSTGIRRFYRYPHP---AHVLHCSMDEKFG 350
            +T    S+  +  + +G++ C V  FH   HS  ++  Y + +    +H L+C +   +G
Sbjct: 1138 VTFQLSSHWAH-TKFLGFSLCAVIAFHSFSHSLQVKCTYHFHNEHGDSHDLYCYLHVCYG 1196

Query: 351  H 351
            +
Sbjct: 1197 N 1197



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 110/229 (48%), Gaps = 42/229 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L L++T ++E+P SI  L+GLV L LK CK LV LP N+  LKSL   ++ GC    
Sbjct: 719 LTYLNLNETAVEELPQSIGELNGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSIS 778

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L +    +  L    ++GTAI   PSSI  ++ L  L   GCN   +            
Sbjct: 779 RLPDFSRNIRYLY---LNGTAIEELPSSIGDLRELIYLDLGGCNRLKN------------ 823

Query: 124 MRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNL----HSLKTLYLSKNN 178
                      LPS +S L  L KLDLS C        S+I       +++K LYL+   
Sbjct: 824 -----------LPSAVSKLVCLEKLDLSGC--------SNITEFPKVSNTIKELYLNGTA 864

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASL 224
              +P+SI CLF L +L L +CK+ + LP     + K++   ++GC   
Sbjct: 865 IREIPSSIECLFELAELHLRNCKQFEILPSSICKLRKLQRLNLSGCVQF 913



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 24/220 (10%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + + P S++ L  LV L L+GCK L+ LPS INS   L+TLN+ GC   +   ET  +
Sbjct: 660 TSLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRINS-SCLETLNVSGCANLKKCPETARK 718

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
              L  L+++ TA+   P SI  +  L  L+ + C              +NL      L 
Sbjct: 719 ---LTYLNLNETAVEELPQSIGELNGLVALNLKNCK-----------LLVNLPENMYLLK 764

Query: 132 ALMLPSLSGLGSLTKL-DLSD-------CGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
           +L++  +SG  S+++L D S         G     +PS IG+L  L  L L   N    L
Sbjct: 765 SLLIADISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNL 824

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           P++++ L  LEKL L  C  +   P++   ++++ +NG A
Sbjct: 825 PSAVSKLVCLEKLDLSGCSNITEFPKVSNTIKELYLNGTA 864



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 10/119 (8%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNL--------VRLPSNINSLKSLK 52
            M CLR L L++T I ++P  I  L GL  L +  C++L        ++LP     L  L+
Sbjct: 923  MVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCQHLRDIECIVDLQLPERCK-LDCLR 981

Query: 53   TLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS 111
             LNL GC  +E + +++G V SLE LD+SG   R  P SI  +  L+ L  R C    S
Sbjct: 982  KLNLDGCQIWE-VPDSLGLVSSLEVLDLSGNNFRSIPISINKLFELQYLGLRNCRNLES 1039


>gi|357462267|ref|XP_003601415.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355490463|gb|AES71666.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1289

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 5/240 (2%)

Query: 1   MECLRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M  L+ L L D ++IK +P   + ++ + +L L  CKNL+ LP++I++LKSL+ LN+ GC
Sbjct: 15  MFSLKMLFLSDCSNIKRLPNFGKNMTCITELNLLNCKNLISLPNSISNLKSLRILNISGC 74

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC--YL 117
            K  NL + + Q+ +LE++D+S TAIR    S+  + NLK LS R C  P +++S   +L
Sbjct: 75  SKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRDPATNSSWNFHL 134

Query: 118 PFPINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
           PF        +    L LP  LSGL SLT+LDLSDC L + +IP DI  L SL+ L LS 
Sbjct: 135 PFGKKFSFFPAQTTNLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERLILSG 194

Query: 177 NNFVTLPA-SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRK 235
           NNFV LP   +  L  L  L+LED  +LQSLP LPP+V     +  A     +   K+ K
Sbjct: 195 NNFVCLPTHHLANLSKLHYLELEDFPQLQSLPILPPHVRMYVTDSDAKEANAVDPQKIWK 254



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 1   MECLRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M+ L+ L+L D +++  +P   + ++ +  L L   KN+V LP++I++LKSLK LN+LGC
Sbjct: 862 MDSLKMLILSDCSNVSRLPEFGKTMTNMSVLNLMHYKNIVCLPNSISNLKSLKILNILGC 921

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K  +L + + Q  +L++L+ S TA+     S+F ++NLK LS  GC  P S++   L  
Sbjct: 922 SKLCSLPDGIKQNTALQDLNFSRTAVGEFDPSLFQLENLKRLSLSGCGWPGSNSGRDLIL 981

Query: 120 PINL 123
           P + 
Sbjct: 982 PYDF 985



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA-IRCP 88
           L+L GC NL R P  +  + SLK L L  C     L E    + ++  L++     I C 
Sbjct: 845 LSLIGCVNLKRFPRTL-EMDSLKMLILSDCSNVSRLPEFGKTMTNMSVLNLMHYKNIVCL 903

Query: 89  PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ALMLPSLSGLG 142
           P+SI  +K+LK L+  GC     S  C LP  I       DL           PSL  L 
Sbjct: 904 PNSISNLKSLKILNILGC-----SKLCSLPDGIKQNTALQDLNFSRTAVGEFDPSLFQLE 958

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           +L +L LS CG        D+   +  KT  +S+N
Sbjct: 959 NLKRLSLSGCGWPGSNSGRDLILPYDFKTFCVSEN 993


>gi|359493412|ref|XP_002280045.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1077

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 160/313 (51%), Gaps = 41/313 (13%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L  L+LK CK L  LPS    LKSL+ L L GC KFE  LE  G +E L+EL 
Sbjct: 632 SLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEMLKELY 691

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
             GTA+R  PSS+ L +NL  LS  GC GPPS AS + P      RRSS+     L +LS
Sbjct: 692 ADGTALRELPSSLSLSRNLVILSLEGCKGPPS-ASWWFP------RRSSNSTGFRLHNLS 744

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
           GL SL+ L+LS C L +    S +  L SL+ L+L  NNFVTLP +++ L  LE ++LE+
Sbjct: 745 GLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNNFVTLP-NLSRLSRLEDVQLEN 803

Query: 200 CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISM 259
           C RLQ LP LP ++  +    C SL  +   LK R                      I +
Sbjct: 804 CTRLQELPDLPSSIGLLDARNCTSLKNVQSHLKNR---------------------VIRV 842

Query: 260 LREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
           L   L + +        + PGS +P W  Y++ G  +    P    N N  +G+    V 
Sbjct: 843 LNLVLGLYT--------LTPGSRLPDWIRYKSSGMEVIAELPPNWFNSN-FLGFWFAIV- 892

Query: 320 HVPKHSTGIRRFY 332
            VPK S G+ RF+
Sbjct: 893 -VPKFS-GLDRFH 903


>gi|224116168|ref|XP_002331978.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832102|gb|EEE70579.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1028

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 192/422 (45%), Gaps = 90/422 (21%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL +L LD+T I E+  SI  + GL  L++  CK L  +  +I  LKSLK L+L GC 
Sbjct: 496 MNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCS 555

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS---FRGCN--GPPSSASC 115
           + +N+   + +VESLEE D+SGT+IR  P+SIFL+KNL  LS    R CN    P    C
Sbjct: 556 ELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDGLRACNLRALPEDIGC 615

Query: 116 YLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                   + R++ +    LP S++ L  L KL L DC + E                  
Sbjct: 616 LSSLKSLDLSRNNFVS---LPRSINQLSGLEKLVLEDCTMLE------------------ 654

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLR 234
              + + +P+ +                           + V +NGC SL T+   +KL 
Sbjct: 655 ---SLLEVPSKV---------------------------QTVNLNGCISLKTIPDPIKLS 684

Query: 235 KSSCTIIDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
            S  +    +D  +L    G++ +   ML  +L+ +S P   F IVVPG+EIP WF +Q+
Sbjct: 685 SSQRSEFMCLDCWELYEHNGQDSMGSIMLERYLQGLSNPRPGFRIVVPGNEIPGWFNHQS 744

Query: 292 EGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY-----RYPHPAHVLHCSMD 346
           + SSI+V  PS+       +G+ AC  F     S     F       YP P   L C + 
Sbjct: 745 KESSISVQVPSW------SMGFVACVAFSAYGESPLFCHFKANGRENYPSPM-CLSCKV- 796

Query: 347 EKFGHRGSDHLWLLYLPRQSYYCNVKW-HFESNHFRLSFMD-EREKHCPAGSGTGLKVKR 404
                  SDH+WL YL         +W H   ++  LSF   ER          G+KVK 
Sbjct: 797 -----LFSDHIWLFYLSFDYLKELKEWQHGSFSNIELSFHSYER----------GVKVKN 841

Query: 405 CG 406
           CG
Sbjct: 842 CG 843


>gi|408537076|gb|AFU75191.1| nematode resistance-like protein, partial [Solanum hougasii]
          Length = 307

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/228 (44%), Positives = 142/228 (62%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL LD T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSLSGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L++LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPAASISRLTRLKRLKLHSCGRLESLPELPPSIKGIYANECTSLMSI 290



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T++   P+S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C   +  +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLDVSGCSKLKN-LPDDLGLLVGLEELHCTHTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL++L L  C  L S      + +K       +L  L   + L  S C I D  
Sbjct: 161 SMSLLKNLKRLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL++L  NG
Sbjct: 221 ILSNLGFLPSLEILILNG 238


>gi|224127917|ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1470

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 189/381 (49%), Gaps = 44/381 (11%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            ++EL LD T I+E+P SI+ L  LV+L L+ CK    LPS+I +L+ L+ LNL GC +F 
Sbjct: 831  IKELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEILPSSICTLRKLERLNLSGCLQFR 890

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            +  E +  +  L  L +  T I   PS I  +K L  L    C    +   C++   + L
Sbjct: 891  DFPEVLEPMVCLRYLYLEETRITKLPSPIGNLKGLACLEVGNCK-YLNDIECFVD--LQL 947

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
              R  DL  L            KL+L  C +    +P  +G L SL+ L LS NNF T+P
Sbjct: 948  SERWVDLDYL-----------RKLNLDGCHIS--VVPDSLGCLSSLEVLDLSGNNFSTIP 994

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID- 242
             SIN L  L+ L L +CKRL+SLP+LPP + K+  + C SL   LG+     SS T++  
Sbjct: 995  LSINKLSELQYLGLRNCKRLESLPELPPRLSKLDADNCESL-NYLGS-----SSSTVVKG 1048

Query: 243  ------FVDSLKLLGKNGLAISMLREFL-------EVVSAPSHKFSIVVPGSEIPKWFMY 289
                  F + L L   N +    L++F        ++        S  +PG   P+W  +
Sbjct: 1049 NIFEFIFTNCLSLCRINQILPYALKKFRLYTKRLHQLTDVLEGACSFFLPGGVSPQWLSH 1108

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRV--FHVPKHSTGIRRFYRYPHP---AHVLHCS 344
            Q+ GS++T    S+  N ++ +G++ C V  FH   HS  ++  Y + +    +H L+C 
Sbjct: 1109 QSWGSTVTCQLSSHWAN-SKFLGFSLCAVIAFHSFGHSLQVKCTYHFSNEHGDSHDLYCY 1167

Query: 345  MDEKFGHR--GSDHLWLLYLP 363
            +   +  +   S+H+ + + P
Sbjct: 1168 LHGWYDEKRIDSEHILVGFDP 1188



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 47/242 (19%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + ++P SI+ L  LV L L+GC+ LV LPS INS   L+TLNL GC   +   ET  +
Sbjct: 660 TSLVKVPSSIQHLDRLVDLDLRGCERLVNLPSRINS-SCLETLNLSGCANLKKCPETARK 718

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
              L  L+++ TA+   P SI  +  L  L+ + C              +NL      L 
Sbjct: 719 ---LTYLNLNETAVEELPQSIGELSGLVALNLKNCK-----------LLVNLPENMYLLT 764

Query: 132 ALMLPSLSGLGSLTKL-DLSD-------CGLGEGAIPSDIGNLHSL-------------- 169
           +L+L  +SG  S+++L D S         G     +PS IG+L  L              
Sbjct: 765 SLLLVDISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRKLIYLNLSGCSSITEF 824

Query: 170 -------KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVN 219
                  K LYL       +P+SI+CLF L +L L +CK+ + LP        +E++ ++
Sbjct: 825 PKVSNNIKELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEILPSSICTLRKLERLNLS 884

Query: 220 GC 221
           GC
Sbjct: 885 GC 886



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNL--------VRLPSNINSLKSLK 52
            M CLR L L++T I ++P  I  L GL  L +  CK L        ++L      L  L+
Sbjct: 899  MVCLRYLYLEETRITKLPSPIGNLKGLACLEVGNCKYLNDIECFVDLQLSERWVDLDYLR 958

Query: 53   TLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS 112
             LNL GC     + +++G + SLE LD+SG      P SI  +  L+ L  R C    S 
Sbjct: 959  KLNLDGC-HISVVPDSLGCLSSLEVLDLSGNNFSTIPLSINKLSELQYLGLRNCKRLES- 1016

Query: 113  ASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
                LP    L  R S L A    SL+ LGS
Sbjct: 1017 ----LP---ELPPRLSKLDADNCESLNYLGS 1040



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 8/109 (7%)

Query: 262  EFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV--F 319
            EFLE         S    G   P+WF +Q+ GS++T    S+  N ++ +G++ C +  F
Sbjct: 1282 EFLEEPDVSKRVSSFRYHGDVTPEWFSHQSWGSTVTCQLSSHWAN-SEFLGFSLCAIIAF 1340

Query: 320  HVPKHSTGIRRFYRYPHP---AHVLHCSMDEKFGHR--GSDHLWLLYLP 363
            H  KHS  ++  Y + +    +H L+C + E+   R   SDH+ + + P
Sbjct: 1341 HSFKHSLQVKCTYHFRNEHGDSHDLYCYLHEEIDERRIDSDHVLVGFDP 1389


>gi|51477390|gb|AAU04763.1| MRGH8 [Cucumis melo]
          Length = 1058

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 135/240 (56%), Gaps = 5/240 (2%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L EL LD T I+E+  SI  L+GLV L L+ C NL+ LP+ I SL  LKTL L GC 
Sbjct: 748 MKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCS 807

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K   + E++G + SLE+LD++ T I   P S+ L+ NL+ L  RG     S    +  FP
Sbjct: 808 KLTRIPESLGFIASLEKLDVTNTCINQAPLSLQLLTNLEILDCRGL----SRKFIHSLFP 863

Query: 121 -INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             N    SS LG      LS   S+ KL+LSDC L +G IP ++ +L SL+ L LS N+F
Sbjct: 864 SWNSSSYSSQLGLKFTYCLSSFCSMKKLNLSDCSLKDGDIPDNLQSLPSLEILDLSGNSF 923

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
             LP S+  L NL  L L +CKRLQ LP+LP +V  V    C SL       K   SS T
Sbjct: 924 SFLPKSVEHLVNLRTLYLVNCKRLQELPKLPLSVRSVEARDCVSLKEYYNQEKQMPSSST 983



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 63/225 (28%)

Query: 19  LSIELLSGLVQLTLKGCKNLVRLPS-------------NINSLKSLKTLNLLGCFKFENL 65
           L +EL +  +    KG K L RL +             + + + +L+ L L GC +   L
Sbjct: 635 LELELPNSFIHYLWKGSKRLDRLKTVNLSDSQFISKTPDFSGVPNLERLILSGCVRLTKL 694

Query: 66  LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
            +++G ++ L +LD               +KN K L               +PF I+L  
Sbjct: 695 HQSLGSLKRLIQLD---------------LKNCKALK-------------AIPFSISL-- 724

Query: 126 RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                 +L++ SLS   SL               P+ +GN+ +L  L+L   +   L  S
Sbjct: 725 -----ESLIVLSLSNCSSLKNF------------PNIVGNMKNLTELHLDGTSIQELHPS 767

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           I  L  L  L LE+C  L  LP    +   ++ + ++GC+ L  +
Sbjct: 768 IGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCSKLTRI 812


>gi|449481499|ref|XP_004156201.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 688

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 178/340 (52%), Gaps = 20/340 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL LD+T IK +  SI  L+ LV L LK C +L++LPS I SL SLKTLNL GC 
Sbjct: 161 MNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCS 220

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K ++L E++G + SLE+LDI+ T +   P S  L+  L+ L+ +G     S    +  FP
Sbjct: 221 KLDSLPESLGDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGL----SRKFLHSLFP 276

Query: 121 I-NLMRRSSDLG-ALMLPSLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                R+ S+    L + +    G SL  L+LSDC L +G +P+D+ +L SL+ L+LSKN
Sbjct: 277 TWKFTRKFSNYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSKN 336

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
           +F  LP SI  L NL  L L +C  L SLP+LP +V +V    C SL       K   SS
Sbjct: 337 HFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVREVEARDCVSLKEYYNKEKQIPSS 396

Query: 238 CTIIDFV---------DSLKLLGKNGLAI---SMLREFLEVVSAPSHKFSIVVPGSEIPK 285
              I F+         +S  +      AI   +M++ ++EV++    K+  V+P      
Sbjct: 397 ELGITFIRCPISKEPSESYNIDQPRLSAIHLRTMVQRYIEVLTWQQEKYFFVIPCPNCIG 456

Query: 286 WFMYQNEGSSITV-TRPSYLCNMNQVVGYAACRVFHVPKH 324
            F  +  G SIT    P Y+   N  +G A    F V KH
Sbjct: 457 CFDKKKYGFSITACCEPDYISEENPRIGIALGAAFEVQKH 496



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 26/180 (14%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           L+ L+QL L+ CK L  +P NI SL+SLK L L GC    +  +    +  L EL +  T
Sbjct: 114 LNHLIQLDLRNCKKLTNIPFNI-SLESLKILVLSGCSNLTHFPKISSNMNHLLELHLDET 172

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LG 142
           +I+   SSI  + +L  L+ + C                     +DL  L LPS  G L 
Sbjct: 173 SIKVLHSSIGHLTSLVLLNLKNC---------------------TDL--LKLPSTIGSLT 209

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           SL  L+L+ C   + ++P  +G++ SL+ L ++       P S   L  LE L  +   R
Sbjct: 210 SLKTLNLNGCSKLD-SLPESLGDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGLSR 268



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 75/343 (21%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL L  + I  +  + + +  L  + L   + L + P + + + +L+ L L GC +  
Sbjct: 47  LLELELPNSSIHHLWTASKSMETLKVINLSDSQFLSKTP-DFSGVPNLERLVLSGCVELH 105

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L  ++G +  L +LD               ++N K L+              +PF I+L
Sbjct: 106 QLHHSLGNLNHLIQLD---------------LRNCKKLT-------------NIPFNISL 137

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                   +L +  LSG  +LT              P    N++ L  L+L + +   L 
Sbjct: 138 -------ESLKILVLSGCSNLTHF------------PKISSNMNHLLELHLDETSIKVLH 178

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTLLGAL-------KL 233
           +SI  L +L  L L++C  L  LP       +++ + +NGC+ L +L  +L       KL
Sbjct: 179 SSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGDISSLEKL 238

Query: 234 RKSSCTI------IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
             +S  +         +  L++L   GL+   L          + KFS    G ++  WF
Sbjct: 239 DITSTCVNQAPMSFQLLTKLEILNCQGLSRKFLHSLFPTWKF-TRKFSNYSQGLKVTNWF 297

Query: 288 MYQNEGSSITVTRPSYLCNM------NQVVGYAACRVFHVPKH 324
            +   G S+ +   S  CN+      N +   A+ ++ H+ K+
Sbjct: 298 TF---GCSLRILNLSD-CNLWDGDLPNDLRSLASLQILHLSKN 336


>gi|357507539|ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
 gi|355499073|gb|AES80276.1| TMV resistance protein N [Medicago truncatula]
          Length = 1127

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 169/326 (51%), Gaps = 33/326 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L  L L  T ++ +  S+  L GL  L LK CK+LV LP  I+ L SL+ L++ GC 
Sbjct: 719  MENLSILALQGTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISGCS 778

Query: 61   KFENLLETVGQVESLEELDISGTAI----RCPPSSIFLMKNLKTLSFRGCNGP-PSSASC 115
            K   L + + +++ LEEL  + T+I    R P S       LK LSF GC G    S + 
Sbjct: 779  KLCRLPDGLKEIKCLEELHANDTSIDELYRLPDS-------LKVLSFAGCKGTLAKSMNR 831

Query: 116  YLPFPINLMRRS--SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            ++PF  N MR S  +  G     S   L SL  ++LS C L E +IP     L SL +L 
Sbjct: 832  FIPF--NRMRASQPAPTGFRFPHSAWNLPSLKHINLSYCDLSEESIPHYFLQLTSLVSLD 889

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
            L+ NNFVT+P+SI+ L  LE L L  C++LQ LP+LPP++ ++  + C SL T       
Sbjct: 890  LTGNNFVTIPSSISELSKLELLTLNCCEKLQLLPELPPSIMQLDASNCDSLET------- 942

Query: 234  RKSSCTIIDFVDSLKLLGKNGLAISMLRE---FLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
                    D      L   + + +S+ RE   F+E    P+ +F +++PG EIP WF+ Q
Sbjct: 943  -----PKFDPAKPCSLFA-SPIQLSLPREFKSFMEGRCLPTTRFDMLIPGDEIPSWFVPQ 996

Query: 291  NEGSSITVTRPSYLCNMNQVVGYAAC 316
               S   V  P+     ++ VG+A C
Sbjct: 997  RSVSWEKVHIPNNF-PQDEWVGFALC 1021



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 120/305 (39%), Gaps = 52/305 (17%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSL-KSLKTLNLLGCF 60
           E +  ++L+     E   S E  S   Q+ L    N V LP  ++ L  SLK L   GC 
Sbjct: 534 EKISSVVLNSLQPYEARWSTEAFSMATQIKLLSL-NEVHLPLGLSCLPSSLKVLRWRGC- 591

Query: 61  KFENLLETVGQVESLEE---LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY- 116
                L+T+ Q   L+E   + +S + +      I  M+NLK L+ +           Y 
Sbjct: 592 ----PLKTLAQTNQLDEVVDIKLSHSQLELLWQGINFMENLKYLNLKFSKNLKRLPDFYG 647

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG------------ 164
           +P    L+ +       + PSL     +  ++L DC   E A+P  +             
Sbjct: 648 VPNLEKLILKGCASLTEVHPSLVHHNKVVLVNLEDCKSLE-ALPEKLEMSSLKELILSGC 706

Query: 165 -----------NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
                      ++ +L  L L       L +S+  L  L  L L+DCK L  LP     +
Sbjct: 707 CEFKFLPEFGESMENLSILALQGTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGL 766

Query: 214 EKVRV---NGCASLVTLLGALKLRK------SSCTIID----FVDSLKLLG----KNGLA 256
             +RV   +GC+ L  L   LK  K      ++ T ID      DSLK+L     K  LA
Sbjct: 767 NSLRVLDISGCSKLCRLPDGLKEIKCLEELHANDTSIDELYRLPDSLKVLSFAGCKGTLA 826

Query: 257 ISMLR 261
            SM R
Sbjct: 827 KSMNR 831


>gi|302398863|gb|ADL36726.1| HD domain class transcription factor [Malus x domestica]
          Length = 909

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 130/235 (55%), Gaps = 11/235 (4%)

Query: 1   MECLREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ++CLR L   +   IK +P  +++   L    L GC  + ++P     +K++  L L G 
Sbjct: 678 LKCLRILNFRNCKSIKILPNEVKM-ETLEVFDLSGCSKVKKIPEFGGQMKNVSKLYLGGT 736

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS-CYLP 118
              E  L   G +ESLEELD++G +IR P SSI  MKNL   SF GCNGPP      +LP
Sbjct: 737 AVEELPLSFKGLIESLEELDLTGISIREPLSSIGPMKNLDLSSFHGCNGPPPQPRFSFLP 796

Query: 119 ---FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
              FP    R S     L+L SL    SL KLDLSDC L +GA+P DIG L SLK L L 
Sbjct: 797 SGLFP----RNSLSPVNLVLASLKDFRSLKKLDLSDCNLCDGALPEDIGCLSSLKELNLG 852

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLG 229
            NNFV+LP SI CL  L    L +CKRLQ LP LP N    ++ + C SL  L G
Sbjct: 853 GNNFVSLPTSIGCLSKLSFFNLNNCKRLQQLPDLPLNNRIYLKTDNCTSLQMLPG 907


>gi|408537110|gb|AFU75208.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 140/228 (61%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  +PS+I  LK LKTLN+ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P ASI+ L  L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|82794024|gb|ABB91439.1| MRGH-J [Cucumis melo]
          Length = 1007

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 132/227 (58%), Gaps = 7/227 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L EL LD T I+++  SI  L+ LV L L+ CKNL+ LP+ I  L S+K L L GC 
Sbjct: 737 MKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCS 796

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + + +++G +  LE+LD+SGT+I   P S+ L+ NLK L+ +G     S   C+  FP
Sbjct: 797 KLDQIPDSLGNISCLEKLDVSGTSISHIPLSLRLLTNLKALNCKGL----SRKLCHSLFP 852

Query: 121 INLMRRSSD---LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           +    RS+D    G  ++   S   S+  L+ SDC L +G IP D+  L SL  L LS+N
Sbjct: 853 LWSTPRSNDSHSFGLRLITCFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRN 912

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            F  LP S+  L NL  L L++C RL+SLP+ P ++  V    C SL
Sbjct: 913 LFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSL 959



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 96/190 (50%), Gaps = 27/190 (14%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++E+ LS+ +L  L+ L LK CK+L  + SNI SL+SLK L L GC + EN  E VG ++
Sbjct: 680 LQELHLSVGILKHLIFLDLKDCKSLKSICSNI-SLESLKILILSGCSRLENFPEIVGNMK 738

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L EL + GTAIR   +SI  + +L  L  R C               NL+   + +G L
Sbjct: 739 LLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCK--------------NLLTLPNAIGCL 784

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
                  LG  +KLD          IP  +GN+  L+ L +S  +   +P S+  L NL+
Sbjct: 785 TSIKHLALGGCSKLD---------QIPDSLGNISCLEKLDVSGTSISHIPLSLRLLTNLK 835

Query: 194 KLKLEDCKRL 203
            L   +CK L
Sbjct: 836 AL---NCKGL 842


>gi|399920218|gb|AFP55565.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1024

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 214/490 (43%), Gaps = 110/490 (22%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L+  T++ E+  SI LL  L     + CK++  LPS +N ++ L+T ++ GC K 
Sbjct: 602  LEKLVLEGCTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKL 660

Query: 63   ENLLETVGQV------------------------ESLEELDISGTAIRCPPSSIFLMKNL 98
            + + E VGQ+                        ESL ELD+SG  IR  P S+FL +NL
Sbjct: 661  KIIPEFVGQMKRLSKLYLNGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNL 720

Query: 99   KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
               SF               FP    R+S      +L SL    SL +L L+DC L EG 
Sbjct: 721  VVSSFG-------------LFP----RKSPHPLIPLLASLKHFSSLMQLKLNDCNLCEGD 763

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            IP+DIG+L SL+ L L  NNFV+LPASI+ L  L  + +E+CKRLQ LP+L       R 
Sbjct: 764  IPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINVENCKRLQQLPELSAIGVLSRT 823

Query: 219  NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNG---LAISMLREFLEVVSA---PSH 272
            + C SL      L   + +C     V+ L ++G      L  S+L+ ++E+      P  
Sbjct: 824  DNCTSLQLFPTGL---RQNC-----VNCLSMVGNQDASYLLYSVLKRWIEIQETHRRPLE 875

Query: 273  KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
                V+PGSEIP+WF  Q+ G  +T         ++  VG    ++              
Sbjct: 876  FLWFVIPGSEIPEWFNNQSVGDRVTEKL------LSNCVGVYVKQIV------------- 916

Query: 333  RYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHC 392
                                 SDHL LL L          +    N   ++F+ E  +  
Sbjct: 917  ---------------------SDHLCLLILLS-------PFRKPENCLEVNFVFEITR-- 946

Query: 393  PAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAV----A 448
               +   +KVK+CG    Y+H+ EE      Q    +S +L E   D     M      A
Sbjct: 947  AVANNRCIKVKKCGVRALYVHDREELISKMNQSKSSSSISLYEEAMDEQEGAMVKTTQEA 1006

Query: 449  KANGSGCCDD 458
              +GSG  DD
Sbjct: 1007 ATSGSGGSDD 1016


>gi|296081002|emb|CBI18506.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 214/474 (45%), Gaps = 62/474 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           I E+P SI  L+GL+ L L+ CK L  LPS+I  LKSL+TL L  C K E+  E +  +E
Sbjct: 145 INELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENME 204

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL--- 130
            L++L + GTA++    SI  +  L +L+ R C    +     LP  I  ++    L   
Sbjct: 205 HLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLAT-----LPCSIGNLKSLETLIVS 259

Query: 131 GALMLPSL-SGLGSLTKL-DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           G   L  L   LGSL  L  L   G      PS I  L +L+ L    NNF +LPA I+ 
Sbjct: 260 GCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEIL----NNFFSLPAGISK 315

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL--RKSSCTIIDFV-- 244
           L  L  L L  CK L  +P+LP ++ +V    C+SL T+L    +   +  C  + F   
Sbjct: 316 LSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQPVCRWLVFTLP 375

Query: 245 DSLKLLGKNGLA--ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPS 302
           +   L  +N  +  ++++   +++   P   FSI +PGSEIP W   QN GS +T+  P 
Sbjct: 376 NCFNLDAENPCSNDMAIISPRMQINFLPDFGFSIFLPGSEIPDWISNQNLGSEVTIELPP 435

Query: 303 YLCNMNQVVGYAACRVFHVP-------------KHSTGIRRFYRYPHPAHVLHCSMDEKF 349
           +    N  +G+A C VF                +  +    F    H  H + C  + + 
Sbjct: 436 HWFESN-FLGFAVCCVFAFEDIAPNGCSSQLLCQLQSDESHFRGIGHILHSIDCEGNSE- 493

Query: 350 GHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMD--EREKHCPAGSG-----TGLKV 402
               S H+WL Y PR                R+S+ D   R +H  A  G         V
Sbjct: 494 DRLKSHHMWLAYKPR-------------GRLRISYGDCPNRWRHAKASFGFISCCPSNMV 540

Query: 403 KRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCC 456
           ++CG H  Y  + EE + T    +   +++      D   ++ +V  A+GSG C
Sbjct: 541 RKCGIHLIYAQDHEERNSTMIHHSSSGNFS------DLKSADSSVG-ASGSGLC 587



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 72/102 (70%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L++LLLD T +K++  SIE L+GLV L L+ CKNL  LP +I +LKSL+TL + GC 
Sbjct: 203 MEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCS 262

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
           K + L E +G ++ L +L   GT +R PPSSI L++NL+ L+
Sbjct: 263 KLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILN 304


>gi|359493229|ref|XP_002264909.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/338 (36%), Positives = 170/338 (50%), Gaps = 50/338 (14%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            +D+KE+P+ IE  S L  L L+ CK L  LPS+I   KSL TL+  GC + E+  E +  
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS-----------SASC- 115
            +   ++LD+ GTAI+  PSSI  ++ L+ L+   C    N P S             SC 
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 116  -YLPFPINLMRRSS-------DLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
                 P NL R  S       DL ++   LPSLSGL SL  L L +CGL E  IPS I +
Sbjct: 1227 KLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLRE--IPSGIWH 1284

Query: 166  LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
            L SL+ L L  N F ++P  IN L+NL    L  C+ LQ +P+LP ++E +  + C+SL 
Sbjct: 1285 LSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSLE 1344

Query: 226  TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IP 284
             L     L  SS          K         S ++EF EV    + K  + +PGS  IP
Sbjct: 1345 ILSSPSTLLWSS-----LFKCFK---------SRIQEF-EV----NFKVQMFIPGSNGIP 1385

Query: 285  KWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
             W  +Q  GS IT+  P Y    +  +G+A C + HVP
Sbjct: 1386 GWISHQKNGSKITMRLPRYWYENDDFLGFALCSL-HVP 1422



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 139/292 (47%), Gaps = 32/292 (10%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC  L  LP  I   K L+TL+  GC K +   E  G +  L ELD+SGTAI+  P
Sbjct: 670 LTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLP 729

Query: 90  SSIFL-MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD 148
           SS+F  +K L+ LSFR                      SS L  + +  +  L SL  LD
Sbjct: 730 SSLFEHLKALEILSFR---------------------MSSKLNKIPI-DICCLSSLEVLD 767

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           LS C + EG IPSDI +L SLK L L  N+F ++PA+IN L  L+ L L  C+ LQ +P+
Sbjct: 768 LSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPE 827

Query: 209 LPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVS 268
           LP ++  +  +G     +    L +          +  L    +N +          V +
Sbjct: 828 LPSSLRLLDAHGSNPTSSRASFLPVHSLVNCFNSEIQDLNCSSRNEVWSEN-----SVST 882

Query: 269 APSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
             S    IV+PGS  +P+W M   +   I    P      N+ +G+A C V+
Sbjct: 883 YGSKGICIVLPGSSGVPEWIM---DDQGIATELPQNWNQNNEFLGFALCCVY 931


>gi|298205188|emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 207/496 (41%), Gaps = 94/496 (18%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L +LLLD   IKE+P SIELL+ L +L L  CKNL  LPS+I  LKSL  L+L GC 
Sbjct: 591  MKALSDLLLDGCGIKELPSSIELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCS 650

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              +   E +  ++ LE LDI  + I+  PSSI  +K+L  L    C          LP  
Sbjct: 651  NLDTFPEIMEDMKCLESLDIRSSGIKELPSSIQNLKSLLRLDMSNC-------LVTLPDS 703

Query: 121  INLMRRSSDLGALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
            I  +R  +  G   L        G  S+ +LD S C L EG+IP++I +L+SL+ L LS 
Sbjct: 704  IYNLRSVTLRGCSNLEKFPKNPEGFYSIVQLDFSHCNLMEGSIPTEIWDLNSLEILNLSW 763

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
            N+ V++P+ I+ L  L+ L +  C+ LQ +P+LP ++ K+             AL   K 
Sbjct: 764  NHMVSIPSGISQLCKLDFLDISHCEMLQDIPELPSSLRKI------------DALYCTKL 811

Query: 237  SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSI 296
                         L K     S      E ++    K  I++    IP W ++Q  GS +
Sbjct: 812  EMLSSPSSLLWSSLLKWFNPTSN-----EHLNCKEGKMIIILGNGGIPGWVLHQEIGSQV 866

Query: 297  TVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF--YRYPHPAHVLHCSMDEKFGH--- 351
             +  P      +  +G+A   ++    H T   RF       P  V+    D        
Sbjct: 867  RIEPPLNWYEDDHFLGFAFFTLYRDYAHCTIPSRFSLRLRGDPDEVVGDCNDHNDSRIWN 926

Query: 352  ---------RGSDHLWLLYLPRQS----YYCNVKWHFESNHFRLSFMDEREKHCPAGSGT 398
                       SD LW+   P+ +    Y+    WHF      L+ +D            
Sbjct: 927  WCECNRCYDDASDGLWVTLYPKNAIPNKYHRKQPWHF------LAAVD------------ 968

Query: 399  GLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNL-----NEFHHDFVGSNMAVAKANGS 453
               +KRCG    Y H+             +  +N+     ++  HD  G N A       
Sbjct: 969  ATNIKRCGVQLIYTHD-------------YLHHNVPMLADHQKGHDDAGENQA------- 1008

Query: 454  GCCDDYDEEPQPNRFR 469
                  D+EP P R R
Sbjct: 1009 -----DDQEPHPKRLR 1019



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 13/99 (13%)

Query: 123 LMRRSSDLGALMLPSLSGLGSLTK-----------LDLSDCGLGEGAIPSDIGNLHSLKT 171
           LM+R+  L  L   +LSG   LT+           L L+DC       PS IG+L  L  
Sbjct: 489 LMQRNERLEQLKFLNLSGSRQLTETSFSNMPNLETLILADCTSLNVVDPS-IGDLKKLTV 547

Query: 172 L-YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           L  L   N  +LP+SI  L +LE + L  C  L+  P++
Sbjct: 548 LNLLGCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFPEM 586


>gi|449447737|ref|XP_004141624.1| PREDICTED: uncharacterized protein LOC101204609 [Cucumis sativus]
          Length = 1040

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 123/337 (36%), Positives = 176/337 (52%), Gaps = 20/337 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL LD+T IK +  SI  L+ LV L LK C +L++LPS I SL SLKTLNL GC 
Sbjct: 161 MNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCS 220

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K ++L E++G + SLE+LDI+ T +   P S  L+  L+ L+ +G     S    +  FP
Sbjct: 221 KLDSLPESLGDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGL----SRKFLHSLFP 276

Query: 121 I-NLMRRSSDLG-ALMLPSLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                R+ S+    L + +    G SL  L+LSDC L +G +P+D+ +L SL+ L+LSKN
Sbjct: 277 TWKFTRKFSNYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLHSLASLQILHLSKN 336

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
           +F  LP SI  L NL  L L +C  L SLP+LP +V +V    C SL       K   SS
Sbjct: 337 HFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVREVEARDCVSLKEYYNKEKQIPSS 396

Query: 238 CTIIDFV---------DSLKLLGKNGLAI---SMLREFLEVVSAPSHKFSIVVPGSEIPK 285
              I F+         +S  +   +  AI   +  + ++EV++     +S V+P   +  
Sbjct: 397 ELGITFIRCPISNEPSESYNIDQPHFSAIHVRTTTQRYIEVLTWQQVNYSFVIPYPNLIA 456

Query: 286 WFMYQNEGSSITV-TRPSYLCNMNQVVGYAACRVFHV 321
            F  +  G SIT    P Y+   N  +G A    + V
Sbjct: 457 CFEEKKYGFSITAHCPPDYISEENPRIGIALGAAYEV 493



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 26/180 (14%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           L+ L+QL L+ CK L  +P NI SL+SLK L L GC    +  +    +  L EL +  T
Sbjct: 114 LNHLIQLDLRNCKKLTNIPFNI-SLESLKILVLSGCSNLTHFPKISSNMNHLLELHLDET 172

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LG 142
           +I+   SSI  + +L  L+ + C                     +DL  L LPS  G L 
Sbjct: 173 SIKVLHSSIGHLTSLVLLNLKNC---------------------TDL--LKLPSTIGSLT 209

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           SL  L+L+ C   + ++P  +G++ SL+ L ++       P S   L  LE L  +   R
Sbjct: 210 SLKTLNLNGCSKLD-SLPESLGDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGLSR 268



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 75/343 (21%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL L  + I  +  + + +  L  + L   + L + P + + + +L+ L L GC +  
Sbjct: 47  LLELELPNSSIHHLWTASKSMETLKVINLSDSQFLSKTP-DFSGVPNLERLVLSGCVELH 105

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L  ++G +  L +LD               ++N K L+              +PF I+L
Sbjct: 106 QLHHSLGNLNHLIQLD---------------LRNCKKLT-------------NIPFNISL 137

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                   +L +  LSG  +LT              P    N++ L  L+L + +   L 
Sbjct: 138 -------ESLKILVLSGCSNLTHF------------PKISSNMNHLLELHLDETSIKVLH 178

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTLLGAL-------KL 233
           +SI  L +L  L L++C  L  LP       +++ + +NGC+ L +L  +L       KL
Sbjct: 179 SSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGDISSLEKL 238

Query: 234 RKSSCTI------IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
             +S  +         +  L++L   GL+   L          + KFS    G ++  WF
Sbjct: 239 DITSTCVNQAPMSFQLLTKLEILNCQGLSRKFLHSLFPTWKF-TRKFSNYSQGLKVTNWF 297

Query: 288 MYQNEGSSITVTRPSYLCNM------NQVVGYAACRVFHVPKH 324
            +   G S+ +   S  CN+      N +   A+ ++ H+ K+
Sbjct: 298 TF---GCSLRILNLSD-CNLWDGDLPNDLHSLASLQILHLSKN 336


>gi|255547496|ref|XP_002514805.1| ATP binding protein, putative [Ricinus communis]
 gi|223545856|gb|EEF47359.1| ATP binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 216/491 (43%), Gaps = 106/491 (21%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            LR L  D+   K +P S +    L +L ++ C  + RL   I  LK LK ++L       
Sbjct: 578  LRYLEWDRYPFKFLPSSFQP-DELTELHMR-CSIMERLWKGIKPLKMLKVIDLSYSV--- 632

Query: 64   NLLETVG--QVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA------- 113
            NLL+T+    V +LE L++ G T +     S+ ++  LK        G  +S        
Sbjct: 633  NLLKTMDFKDVPNLESLNLEGCTRLFEVHQSLGILNRLKL----NVGGIATSQLPLAKLW 688

Query: 114  -----SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
                 S +LP+      ++ +  A+ LPSLS L SL  LDLS C L EGA+P+D+     
Sbjct: 689  DFLLPSRFLPW------KNQNPLAVTLPSLSVLRSLKSLDLSYCNLMEGALPNDLSCFPM 742

Query: 169  LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
            LKT  LS N+F ++P+SI+ L  LE  +  DCKRLQ+ P LP ++  + ++GC  L +LL
Sbjct: 743  LKTFNLSGNDFFSIPSSISRLTKLEDFRFADCKRLQAFPNLPSSILYLSMDGCTVLQSLL 802

Query: 229  ---------------------------------------GALKLRKSSCTIIDFVDSLKL 249
                                                    + + + S+ + + FV+ LKL
Sbjct: 803  PRNISRQFKLENLHVEDCKRLQLSPNLSSSILHLSVDGLTSQETQTSNSSSLTFVNCLKL 862

Query: 250  LGKNGLAIS-----------MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
            +       S           +LR   + +  PS + SI + G+EIP WF YQ+ GSS+ +
Sbjct: 863  IEVQSEDTSAFRRLTSYLHYLLRHSSQGLFNPSSQISICLAGNEIPGWFNYQSVGSSLKL 922

Query: 299  TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHP-----------AHVLHCSMDE 347
              P +    N+ +G+A   VF   +  T         H            + ++H S D 
Sbjct: 923  QLPPFWWT-NKWMGFAISIVFESQESQTDTSAILCDLHACIAEDQDLFLGSSIVHISKDS 981

Query: 348  KFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
               +  SD LW  Y+PR S  C   W    NH +++F  +R           L+VK CGF
Sbjct: 982  --SNITSDQLWFNYMPRSSLTCLDMWE-ACNHLKVTFSSDR-----------LRVKHCGF 1027

Query: 408  HPGYMHEVEEF 418
               +  +++E 
Sbjct: 1028 RAIFSRDIDEL 1038


>gi|147769268|emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 149/456 (32%), Positives = 200/456 (43%), Gaps = 102/456 (22%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +E L  + L+ T I+E+P SI  L+ LV L L+ CK L  LP +I  L SL+TL L GC 
Sbjct: 696  LEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCS 755

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K + L + +G+++ L EL + GT I+  PSSI L+ NL+ LS  GC G   S S  L F 
Sbjct: 756  KLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGW-ESKSWNLAFS 814

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDI----------------- 163
                     L  L LP LSGL SL  L+LSDC L EGA+P D+                 
Sbjct: 815  FGSW---PTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFI 871

Query: 164  ---GNLHSLKTLYL-------SKNNFVTLPASI--------------------------- 186
                NL  L  L++       S  +   LP+SI                           
Sbjct: 872  TIPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYG 931

Query: 187  -------NCLFNLEK-------LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----- 227
                   NC   +E        L L  CK LQSLP+LP ++  +    C SL T      
Sbjct: 932  GLRLEFSNCFRLMENEHSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPS 991

Query: 228  ------LGALKLRKSSCTII---DFVDSLK--LLGKNGLAI--SMLREFLE-VVSAPSHK 273
                   G L+L  S+C  +   +  DS+K  LLG   LA     L+ FL   +  P + 
Sbjct: 992  ACTSKRYGGLRLEFSNCFRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDGPHNL 1051

Query: 274  FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR 333
            +  +VPGS IP+WF+ Q+ GSS+TV  P +  N  +++G A C V             +R
Sbjct: 1052 YDAIVPGSRIPEWFVDQSTGSSVTVELPPHWYN-TKLMGMAVCAVIGATGVIDPTIEEWR 1110

Query: 334  YPHPAHVLHCSM-----DEKFGHRG--SDHLWLLYL 362
               P     CS      D+    R    DH W  YL
Sbjct: 1111 ---PQIYFKCSSVIYQGDDAIMSRSMKDDHTWFRYL 1143



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 126/296 (42%), Gaps = 89/296 (30%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV-GQVESLEELDISGTAI 85
           L ++ L GC +LV+L  +I +LK L  LNL GC K E   E V G +E L  + + GTAI
Sbjct: 650 LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 709

Query: 86  RCPPSSIF------------------------LMKNLKTLSFRGCNGPPSSASCYLPFPI 121
           R  PSSI                          + +L+TL+  GC     S    LP  +
Sbjct: 710 RELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGC-----SKLKKLPDDL 764

Query: 122 NLMRRSSDL-----GALMLP-SLSGLGSLTKLDLSDCGLGE----------GAIPS---- 161
             ++   +L     G   +P S++ L +L +L L+ C   E          G+ P+    
Sbjct: 765 GRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSFGSWPTLEPL 824

Query: 162 ---DIGNLHSLKTLYLS-------------------------KNNFVTLPASINCLFNLE 193
               +  L+SLK L LS                         +N+F+T+PA+++ L  L 
Sbjct: 825 RLPRLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPANLSGLSRLH 884

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----------LGALKLRKSSC 238
            L L  CK LQSLP+LP ++  +    C SL T             G L+L  S+C
Sbjct: 885 VLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYGGLRLEFSNC 940


>gi|408537074|gb|AFU75190.1| nematode resistance-like protein, partial [Solanum stoloniferum]
          Length = 307

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 139/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+P S+E  SG+  + L  CK+L  LPS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK L  RGC          L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCTA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL +LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L++LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPAASISHLTRLKRLKLHSCGRLESLPELPPSIKVIHANECTSLMSI 290



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  +P  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILILSGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  TA+   P+S+     +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  L++S C   +  +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLNVSGCSKLKN-LPDDLGLLVGLEELHCTDTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL+ L L  C  L S      + +K       +L  L   ++L  S C I D  
Sbjct: 161 SMSLLKNLKHLYLRGCTALSSQVSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCNISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL++L  NG
Sbjct: 221 ILSNLGFLPSLEILILNG 238


>gi|408537106|gb|AFU75206.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 136/228 (59%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LK LN+ GC 
Sbjct: 71  MNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILNVSGCV 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K ENL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G + S++G L SLK L L  NNF 
Sbjct: 183 VSSSSHGQKSVGVNFQNLSGLCSLIMLDLSDCNITDGGVLSNLGFLSSLKVLILDGNNFF 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ L L  C RL+SLP+LPP++  +  + C SL+++
Sbjct: 243 NIPGASISRLTRLKILALRGCGRLESLPELPPSITGIYAHDCTSLMSI 290


>gi|126571551|gb|ABO21407.1| TMV resistance protein N [Nicotiana tabacum]
          Length = 1141

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 156/311 (50%), Gaps = 29/311 (9%)

Query: 14   IKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            I+E+P SI +  + + +L     KNLV LPS+I  LKSL +L++ GC K E+L E +G +
Sbjct: 724  IRELPSSITQYQTHITKLLSWNMKNLVALPSSICRLKSLVSLSVPGCSKLESLPEEIGDL 783

Query: 73   ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            ++L  LD   T I  PPSSI  +  L  L F G     +       FP            
Sbjct: 784  DNLRVLDARDTLILRPPSSIVRLNKLIILMFGGFKDVVN-----FEFP------------ 826

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
               P   GL SL  LDL+ C L +G +P DIG+L SLK L LS+NNF  LP SI  L  L
Sbjct: 827  ---PVAEGLRSLEHLDLTCCNLIDGGLPEDIGSLSSLKKLDLSRNNFEHLPPSIAQLGAL 883

Query: 193  EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK 252
              L L+DC+RL  LP+LPP + ++RV+ C   +  +  L  ++     +   D+      
Sbjct: 884  RSLDLKDCQRLTQLPELPPELSELRVD-CHMALKFIHDLVTKRKKLGRLKLDDAHNDTIY 942

Query: 253  NGLA------ISMLREFLEVVSAPSHK-FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLC 305
            N  A      IS +R  +    + S + F+  +   +IP WF +Q   SS+ V  P    
Sbjct: 943  NLFAHALFQNISSMRHDISASDSLSLRVFTGQLYLVKIPSWFHHQGWDSSVLVNLPGNWY 1002

Query: 306  NMNQVVGYAAC 316
              ++ +G+A C
Sbjct: 1003 IPDKFLGFAVC 1013


>gi|255563202|ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223538080|gb|EEF39691.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1158

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 167/366 (45%), Gaps = 50/366 (13%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            +R L L++T I+E+PLSIE LS LV L +K C  L  +PS I  LKSL  L L GC K E
Sbjct: 723  IRYLYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLILSGCKKLE 782

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            +  E +     L+ L +  TA+   P +   +K L  L+F  C                 
Sbjct: 783  SFPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDC----------------- 825

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                S LG L   ++  L SL +L    C L    +P+D+  L S+  L LS +NF T+P
Sbjct: 826  ----SKLGKLP-KNMKNLKSLAELRAGGCNLS--TLPADLKYLSSIVELNLSGSNFDTMP 878

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT---- 239
            A IN L  L  + +  CKRLQSLP+LPP +  +    C SLV++ G  +L +  C+    
Sbjct: 879  AGINQLSKLRWINVTGCKRLQSLPELPPRIRYLNARDCRSLVSISGLKQLFELGCSNSLD 938

Query: 240  --IIDFVDSLKLLGKNGLAI-----------SMLREFLEVVSAPSHKFSIVVPGSEIPKW 286
                 F +  KL   N   I           +M R+  +             PG+EIP+W
Sbjct: 939  DETFVFTNCFKLDQDNWADILASAQLKIQHFAMGRKHYDRELYDETFICFTYPGTEIPEW 998

Query: 287  FMYQNEGSSITVTR--PSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCS 344
            F  ++ GSS+T+    P +L   ++ +G++ C V          R    YP       C+
Sbjct: 999  FADKSIGSSVTIQHLPPDWL--NHRFLGFSVCLVVAFDD-----RFLCEYPRGVVACKCN 1051

Query: 345  MDEKFG 350
                +G
Sbjct: 1052 FQNSYG 1057


>gi|408537100|gb|AFU75203.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 138/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  LPS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LSFRGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMKLLKNLKHLSFRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGISSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P ASI+ L  L  L L  C+ L+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASISHLTQLRALALAGCRMLESLPELPPSIKGIYADECTSLMSI 290


>gi|51477387|gb|AAU04760.1| MRGH12 [Cucumis melo]
          Length = 1007

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 132/227 (58%), Gaps = 7/227 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L EL LD T I+++  SI  L+ LV L L+ CKNL+ LP+ I  L S+K L L GC 
Sbjct: 737 MKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCS 796

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + + +++G +  L++LD+SGT+I   P S+ L+ NLK L+ +G     S   C+  FP
Sbjct: 797 KLDQIPDSLGNISCLKKLDVSGTSISHIPLSLRLLTNLKALNCKGL----SRKLCHSLFP 852

Query: 121 INLMRRSSD---LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           +    R+++    G  ++   S   S+  L+ SDC L +G IP D+  L SL  L LS+N
Sbjct: 853 LWSTPRNNNSHSFGLRLITCFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRN 912

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            F  LP S+  L NL  L L++C RL+SLP+ P ++  V    C SL
Sbjct: 913 LFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSL 959



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 96/190 (50%), Gaps = 27/190 (14%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++E+ LS+ +L  L+ L LK CK+L  + SNI SL+SLK L L GC + EN  E VG ++
Sbjct: 680 LQELHLSVGILKHLIFLDLKDCKSLKSICSNI-SLESLKILILSGCSRLENFPEIVGNMK 738

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L EL + GTAIR   +SI  + +L  L  R C               NL+   + +G L
Sbjct: 739 LLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCK--------------NLLTLPNAIGCL 784

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
                  LG  +KLD          IP  +GN+  LK L +S  +   +P S+  L NL+
Sbjct: 785 TSIKHLALGGCSKLD---------QIPDSLGNISCLKKLDVSGTSISHIPLSLRLLTNLK 835

Query: 194 KLKLEDCKRL 203
            L   +CK L
Sbjct: 836 AL---NCKGL 842


>gi|408537092|gb|AFU75199.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 138/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  LPS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P ASI+ L  L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASISRLTQLRALTLAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|408537104|gb|AFU75205.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 138/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  +PS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P ASI+ L  L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|408537112|gb|AFU75209.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 138/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  +PS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P ASI+ L  L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|297744796|emb|CBI38064.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/251 (43%), Positives = 146/251 (58%), Gaps = 11/251 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ LR+LLLD+T ++E+P SI  L+GLV L L  CK LV LP ++  L SL+ L L GC 
Sbjct: 320 MKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCS 379

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L + +G +  L  L+  G+ I+  P SI L+ NL+ LS  GC       S +    
Sbjct: 380 ELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLW---- 435

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 SS    L L SL  L S+  L LSDC L EGA+PSD+ +L SL++L LSKNNF+
Sbjct: 436 ------SSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLESLDLSKNNFI 489

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-LGALKLRKSSCT 239
           T+PAS+N L  L  L L  CK LQS+P+LP  ++KV  + C SL T  L A   RK +  
Sbjct: 490 TIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETFSLSACASRKLNQL 549

Query: 240 IIDFVDSLKLL 250
              F D  +L+
Sbjct: 550 NFTFSDCFRLV 560



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 33/167 (19%)

Query: 74  SLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +LE L + G  + ++  PS I  ++ L  L+  GC    S AS            S  + 
Sbjct: 251 NLERLILEGCTSMVKVHPS-IGALQKLIFLNLEGCKNLKSFAS------------SIHMN 297

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           +L + +LSG   L K             P  + N+ SL+ L L +     LP+SI  L  
Sbjct: 298 SLQILTLSGCSKLKKF------------PEMLENMKSLRQLLLDETALRELPSSIGRLNG 345

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTL---LGALK 232
           L  L L +CK+L SLPQ    +  +++    GC+ L  L   LG+L+
Sbjct: 346 LVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLR 392


>gi|408537096|gb|AFU75201.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 138/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P ASI+ L  L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|408537098|gb|AFU75202.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 135/228 (59%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LK LN+ GC 
Sbjct: 71  MNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILNVSGCV 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K ENL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G + S++G L SLK L L  NNF 
Sbjct: 183 VSSSSHGQKSVGVNFQNLSGLCSLIMLDLSDCNITDGGVLSNLGFLSSLKVLILDGNNFF 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ L L    RL+SLP+LPP++  +  + C SL+++
Sbjct: 243 NIPGASISRLTRLKILALRGRGRLESLPELPPSITGIYAHDCTSLMSI 290


>gi|224085409|ref|XP_002307567.1| predicted protein [Populus trichocarpa]
 gi|222857016|gb|EEE94563.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 217/504 (43%), Gaps = 100/504 (19%)

Query: 1   MECLRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           + CL +L+L D   + E+  SI +L  L+ L  K CK+L  LP +I +L SLK LN+ GC
Sbjct: 90  LPCLEKLILKDCVSLVEVHDSIGILGRLLLLNFKNCKSLKTLPGSICALSSLKKLNVSGC 149

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K E L E +G ++SL  L   GTAI   P +I  ++ LK LSF  C+   S      P 
Sbjct: 150 LKLEGLPEDLGSLKSLVVLLADGTAISTIPETIGNLEKLKILSFHDCHLIFSPRK--FPQ 207

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
            +N+                   SL +LDL  C L +  IP D   L  L+TL L  NNF
Sbjct: 208 TMNIFP----------------ASLQELDLRHCNLSDSMIPHDFRGLFLLQTLKLCGNNF 251

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---------------------KVRV 218
            +LPASI  L  L KL L +CKRL+ +P+L  ++E                     ++++
Sbjct: 252 TSLPASIGNLPKLTKLLLNNCKRLEYIPELQSSLETFHANDCPRLQFINMKFWRGGELKL 311

Query: 219 NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEV----------VS 268
           NGC +L  L G   L      +++     K+LG  GL        +EV          + 
Sbjct: 312 NGCRNLKCLQGFFNLEPLGVDVVE-----KILGTCGLVTEKPFPAVEVHIINNLTRTAII 366

Query: 269 APSHK------FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
           +P         +SI +P  +IP  F +QNEG +I++  P+             C+V    
Sbjct: 367 SPLQALCEKSIYSIFLPVKDIPTRFSHQNEGDTISLQVPAL---------DPGCKV---- 413

Query: 323 KHSTG--IRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYY-CNVK------- 372
              TG  I   Y +       + S +    +R  +  W +Y PR +++ C V+       
Sbjct: 414 ---TGFLISVVYAWEDSLESCYLSPNITVINRTRNFDW-IYDPRVTFFPCEVEQDMMWLS 469

Query: 373 -WHFESN-------HFRLSFMDEREK----HCPAGSGTGLKVKRCGFHPGYMHEVEEFDE 420
            W FE+             F DE E+          G G+ VKRCG H  Y H   +  +
Sbjct: 470 CWLFENEINEKDVVDMSWRFQDEVEEGDQLEVLIDMGFGIVVKRCGIHLLYHHNDLQGSQ 529

Query: 421 TTKQWTRFTSYNLNEFHHDFVGSN 444
           +       +  + +  H  F+ S+
Sbjct: 530 SNDILAAISHASFSRHHGRFMMSS 553


>gi|147799277|emb|CAN74723.1| hypothetical protein VITISV_014048 [Vitis vinifera]
          Length = 1448

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 206/459 (44%), Gaps = 75/459 (16%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+   + +D+ E+P+ IE    L  L L+ CKNL  LPS+I   KSL TL+  GC + E+
Sbjct: 1021 RKRCFEGSDMNEVPI-IENPLELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLES 1079

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASC----- 115
              E +  +ESL +L + GT I+  PSSI  ++ L TLS   C    N P S  +      
Sbjct: 1080 FPEILQDMESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKN 1139

Query: 116  --------YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
                    +  FP NL R  S         D     LPSLSGL SL  L L  C L E  
Sbjct: 1140 LGVRRCPNFNKFPDNLGRLRSLKSLFISHLDSMDFQLPSLSGLCSLKLLMLHACNLRE-- 1197

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            IPS I  L SL  LYL +N+F  +P  I+ L+NL+ L L  CK LQ +P+LP ++  + V
Sbjct: 1198 IPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIPELPSSLMYLDV 1257

Query: 219  NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVV 278
            + C SL  L     L  SS     F   ++     G    ++R F+              
Sbjct: 1258 HNCTSLENLSSQSNLLWSSLFKC-FKSQIQ-----GREFGLVRTFI-------------- 1297

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP--- 335
                IP+W  +Q  G  IT+  P      +  +G+  C ++   +  T  RR + Y    
Sbjct: 1298 -AESIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLYIPLEIETTTRRRFNYKLKF 1356

Query: 336  --HPAHVLHCSMDE-KFGHRGS--DHLWLLYLPR----QSYYCNVKWHFESNHFRLSFMD 386
                A+V + S    +F + G       L+Y P+    + YY N +W   +  F  S   
Sbjct: 1357 DDDSAYVSYQSFQSCEFCYDGDALSQGCLIYYPKCRFPKRYYSN-EWGTLNASFNAS--- 1412

Query: 387  EREKHCPAGSGTG-LKVKRCGFHPGYMHEVEEFDETTKQ 424
                     SGT  +K  RCGFH  Y H+ E+ + T  Q
Sbjct: 1413 --------ESGTEPVKAARCGFHFLYAHDYEQNNLTIVQ 1443



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 145/318 (45%), Gaps = 44/318 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L ELLL  ++IK++    +L   L  + L    +L+R+P + +S+ +L+ L L      E
Sbjct: 603 LVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIP-DFSSVPNLEILTLE-----E 656

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
              E  G +  L  LD+SGTAI   PSSI  +  L+TL    C+                
Sbjct: 657 RFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHK------------ 704

Query: 124 MRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                      +PS +  L SL  LDL  C + EG IPSDI +L SL+ L L + +F ++
Sbjct: 705 -----------IPSHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFGSI 753

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
           P +IN L  LE L L  C  L+ +P+LP  +  +  +G   + +    L L     ++++
Sbjct: 754 PTTINQLSRLEILNLSHCSNLEQIPELPSRLRLLDAHGSNRISSRAPFLPLH----SLVN 809

Query: 243 FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRP 301
                ++L     + S         S       IV+PGS  IP+W M+      I+   P
Sbjct: 810 CFSWARVLKSTSFSDS---------SYHGKGTCIVLPGSAGIPEWIMHWRNRCFISTELP 860

Query: 302 SYLCNMNQVVGYAACRVF 319
                 N+ +G+A C V+
Sbjct: 861 QNWHQNNEFLGFAICCVY 878



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++PS+I  L SLK L+L  C 
Sbjct: 665 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSLKVLDLGHCN 724

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  +  L+ L+   C+ 
Sbjct: 725 IMEGGIPSDICHLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSN 773


>gi|47681363|gb|AAT37497.1| N-like protein [Nicotiana tabacum]
          Length = 941

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 119/214 (55%), Gaps = 23/214 (10%)

Query: 14  IKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           I+E+P SI +  + + +L L+G + LV LPS+I  LKSL +L++ GCFK E+L E VG +
Sbjct: 727 IRELPSSITQYQTHITKLDLRGMEKLVALPSSICRLKSLVSLSVSGCFKLESLPEEVGDL 786

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           E+LEELD S T I  PPSSI  +  LK   F       S    +   P            
Sbjct: 787 ENLEELDASCTLISRPPSSIIRLSKLKIFDF-----GSSKDRVHFELP------------ 829

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
              P + G  SL  L L +C L +G +P D+G+L SLK LYLS NNF  LP SI  L  L
Sbjct: 830 ---PVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLKKLYLSGNNFEHLPRSIAQLGAL 886

Query: 193 EKLKLEDCKRLQSLPQLPP--NVEKVRVNGCASL 224
             L+L +CKRL  LP+     N+E + + GC+ L
Sbjct: 887 RILELRNCKRLTQLPEFTGMLNLEYLDLEGCSYL 920


>gi|451799084|gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 200/463 (43%), Gaps = 81/463 (17%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+     +D+ E+P+ IE    L  L L+ C+NL  LPS+I   KSL TL+  GC + E+
Sbjct: 1085 RKCCFKGSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLES 1143

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS--------- 111
              E +  +ESL +L ++GTAI+  PSSI  ++ L+ L  R C    N P S         
Sbjct: 1144 FPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKT 1203

Query: 112  --SASC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
               + C  +   P NL R  S         D     LPSLSGL SL  L L  C L E  
Sbjct: 1204 LVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQGCNLRE-- 1261

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
             PS+I  L SL TL L  N+F  +P  I+ L+NLE L L  CK LQ +P+LP  +  +  
Sbjct: 1262 FPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDA 1321

Query: 219  NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVV 278
            + C SL  L     L  SS            L K   +    REF + +       + + 
Sbjct: 1322 HHCTSLENLSSRSNLLWSS------------LFKCFKSQIQGREFRKTL------ITFIA 1363

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAAC-------------RVFHVPKHS 325
              + IP+W  +Q  G  IT+  P      +  +G+  C             R F+   + 
Sbjct: 1364 ESNGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLCVPLEIETKKHRCFNCKLNF 1423

Query: 326  TGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPR----QSYYCNVKWHFESNHFR 381
                 ++ Y        C  DE    +G     L+Y P+    + Y+ N +W   +  F 
Sbjct: 1424 DDDSAYFSYQSFQFCEFC-YDEDASSQGC----LIYYPKSRIPKRYHSN-EWRTLNAFFN 1477

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
            + F               +KV RCGFH  Y H+ E+ + T  Q
Sbjct: 1478 VYF-----------GVKPVKVARCGFHFLYAHDYEQNNLTIVQ 1509



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 144/322 (44%), Gaps = 46/322 (14%)

Query: 8   LLDKTDIKEMPLSIELLS--------GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           L DK  + ++  S+ L+          L  LTL+GC NL  LP  I   K L+TL+  GC
Sbjct: 623 LHDKLRVIDLSHSVHLIRIPDFSSVPNLEILTLEGCVNLELLPRGIYKWKHLQTLSCNGC 682

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K E   E  G +  L  LD+SGTAI   PSSI  +  L+TL  + C             
Sbjct: 683 SKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC------------- 729

Query: 120 PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
                     L    +P+ +  L SL +LDL  C + EG IPSDI +L SL+ L L + +
Sbjct: 730 ----------LKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGH 779

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
           F ++P +IN L  LE L L  C  L+ +P+LP  +  +  +G             R SS 
Sbjct: 780 FSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHGSN-----------RTSSR 828

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSIT 297
            +  F+    L+     A  + R      S       IV+P ++ IP+W M + +     
Sbjct: 829 AL--FLPLHSLVNCFSWAQGLKRTSFSDSSYRGKGTCIVLPRTDGIPEWIMDRTKRYFTE 886

Query: 298 VTRPSYLCNMNQVVGYAACRVF 319
              P      N+ +G+A C V+
Sbjct: 887 TELPQNWHQNNEFLGFALCCVY 908



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P++I  L SLK L+L  C 
Sbjct: 695 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCN 754

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  +  L+ L+   CN 
Sbjct: 755 IMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNN 803


>gi|357462269|ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 1743

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 127/230 (55%), Gaps = 29/230 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLP------------------------SNINS 47
            D+K  P  +E+ S L  L L  C N+ RLP                        ++I +
Sbjct: 681 VDLKIFPKKLEMFS-LKMLFLSYCSNIKRLPDFGKNMTCITELNLLNCENLLSLPNSICN 739

Query: 48  LKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           LKSL+ LN+ GC K  NL + + Q+ +LE++D+S TAIR    S+  + NLK LS R C 
Sbjct: 740 LKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCR 799

Query: 108 GPPSSASC--YLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIG 164
            P +++S   +LPF        +   +L LP  LSGL SLT+LDLSDC L + +IP DI 
Sbjct: 800 DPATNSSWNFHLPFGKKFSFFPAQTTSLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDID 859

Query: 165 NLHSLKTLYLSKNNFVTLPAS-INCLFNLEKLKLEDCKRLQSLPQLPPNV 213
            L SL+ L LS NNFV LP   I+ L  L  L+LEDC +LQSLP L P V
Sbjct: 860 CLSSLERLILSGNNFVCLPTHYISNLSKLRYLELEDCPQLQSLPMLQPQV 909


>gi|357474813|ref|XP_003607692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508747|gb|AES89889.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1181

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 205/446 (45%), Gaps = 68/446 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ++ L EL+L  + I ++    + L  L  L L   KNL  +P +     +LK LNL GC 
Sbjct: 701  LDELSELILVGSSITQLWKDKKYLPNLRNLDLSCSKNLATMP-HFAEFPNLKRLNLEGCV 759

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
                +  ++G +  L  L++     + C P+ I  + +LK  +  GC+    ++  +  F
Sbjct: 760  SLVQINSSIGLLRELVFLNLKNCKNLICIPNEISGLTSLKYFTICGCSNTFKNSKAHGYF 819

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                        + +LPSL  +  L+++D+S C L +  IP  +G+L  L+ L L  NNF
Sbjct: 820  -----------SSCLLPSLPSVSCLSEIDISFCNLSQ--IPDALGSLTWLERLNLRGNNF 866

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
            VTLP S+     LE L LE CK+L SLP+LP                L  A+K  K    
Sbjct: 867  VTLP-SLRDHSRLEYLNLEHCKQLTSLPELP----------------LPAAIKQDKHKRA 909

Query: 240  IIDFVDSLKLLGKNGLAISMLREFL-------EVVSAPSHKFSIVVPGSEIPKWFMYQNE 292
             + F+ +   LG+    I+M   ++       +  SA  H+  IV+PG+EIPKWF  +  
Sbjct: 910  GM-FIFNCPELGEREQCINMTLSWMIHFIQGKQDSSASFHQIDIVIPGTEIPKWFNNRRM 968

Query: 293  GSSITVTRPSYLCNMNQVVGYAACRVFHV-------PKHSTG--IRRFYRYPHPAH---- 339
            G SI++  PS +   + ++G A C VF V        ++  G  IR  ++  + A+    
Sbjct: 969  GRSISID-PSPIVYDDNIIGIACCAVFSVELFDPTKTRYEWGPIIRLGFKSSNAANSNYV 1027

Query: 340  VLHCSMDEKFGHRGSDHLWLLYLPRQSYYC------NVKWHFESNHFRLSFMDEREKHCP 393
            V+  ++        S+H+WL+Y  R+ ++       N  W  +      S M+       
Sbjct: 1028 VIPVTLYRHLITVKSNHMWLIYFDRELFFSFLRSIDNTLWELDHIKMEASVMN------- 1080

Query: 394  AGSGTGLKVKRCGFHPGYMHEVEEFD 419
             G G  L+VK CGF   +  + + FD
Sbjct: 1081 -GQGLHLEVKNCGFRWVFKQDQQPFD 1105


>gi|408537108|gb|AFU75207.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 137/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  LPS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS  L+KN K LS RGCN   S  S      
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSTSLLKNPKHLSLRGCNALSSQVS------ 184

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            +       +G +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 185 -STSHGQKSMG-VKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P AS + L  L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASKSRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|297741030|emb|CBI31342.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/223 (43%), Positives = 138/223 (61%), Gaps = 10/223 (4%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ L+L+    ++++  S+  L  L+ L LK C+ L  LPS+   LKSL+T  L GC KF
Sbjct: 43  LKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKF 102

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E  G +E L+EL +   AI   PSS   ++NL+ LSF+GC GP SS    LP    
Sbjct: 103 KEFPENFGSLEMLKELYVDEIAIGVLPSSFSFLRNLQILSFKGCKGP-SSTLWLLP---- 157

Query: 123 LMRRSSD-LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
             RRSS+ +G+++ P LSGL SL +L+LS+C L +    S +G L SL+ LYL  N+FVT
Sbjct: 158 --RRSSNSIGSILQP-LSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGNDFVT 214

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           LP++I+ L NL  L LE+CKRLQ LP+LP ++  +    C SL
Sbjct: 215 LPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSL 257


>gi|224144416|ref|XP_002325283.1| predicted protein [Populus trichocarpa]
 gi|222862158|gb|EEE99664.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 166/325 (51%), Gaps = 24/325 (7%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           + CL  L+L   T + ++  SI  L  LV L L  C +L  LP ++ +LKSL+TLN+  C
Sbjct: 90  LSCLERLILTGCTSLVKVHQSIGNLKSLVLLNLHYCDSLKTLPESMGNLKSLQTLNVTQC 149

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPS--SAS 114
            + E L E++G +ESL EL   GTAI+  P+S   +K L  LSF G N     P   S S
Sbjct: 150 RQLEKLPESLGDIESLTELFTKGTAIKQLPTSARYLKKLTKLSFGGYNKVFYSPDLPSKS 209

Query: 115 CYLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +  F + L  R+      MLP+  +   SL +L+LS  GL E     D+G+L  L+ L 
Sbjct: 210 RFSRFSLWLSPRNCSSSNAMLPAFFNSFSSLKELNLSYAGLSEATSSIDLGSLSFLEDLD 269

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK- 232
           LS N F  LP+ I+ L  L+ L++E C  L S+P+LP +V  + +N C S+  +   L+ 
Sbjct: 270 LSGNKFFNLPSGISLLPKLQCLRVEKCSNLLSIPELPSSVLFLSINDCTSIERVSAPLQH 329

Query: 233 -----LRKSSCTIIDFVDSLKLLGKN----------GLAISMLREFLEVVSAPSHKFSIV 277
                L    C  +  +  ++  G N           L+ +     ++ +    H + I 
Sbjct: 330 ERLPLLNVKGCRNLIEIQGMECAGNNWSILNLNGCSNLSENYKMSLIQGLCKGKH-YDIC 388

Query: 278 VPGSEIPKWFMYQNEGSSITVTRPS 302
           + G EIP+WF ++ EGS+++   PS
Sbjct: 389 LAGGEIPEWFSHRGEGSALSFILPS 413


>gi|408537084|gb|AFU75195.1| nematode resistance-like protein, partial [Solanum berthaultii]
          Length = 307

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/228 (44%), Positives = 142/228 (62%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +NL + +G +  LEZL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 131 NLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSMSLLKNLKXLSLSGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCXISDGGILSNLGFLPSLEJLILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL DC RL+SLP+LPP+++K+  NGC SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 290



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 111/258 (43%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T +   P+S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLGATXLSELPASVENLSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C      +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLDVSGCS-NLKNLPDDLGLLVGLEZLHCTHTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL+ L L  C  L S      + +K       +L  L   + L  S C I D  
Sbjct: 161 SMSLLKNLKXLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCXISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL+JL  NG
Sbjct: 221 ILSNLGFLPSLEJLILNG 238


>gi|224145341|ref|XP_002325608.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862483|gb|EEE99989.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1083

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 183/372 (49%), Gaps = 47/372 (12%)

Query: 1    MECLRELLLDKTDIKEMP-LSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
            ME L EL L KT IKE+P +S + ++ L  L L G   L  LPS+I  L  L++L++ GC
Sbjct: 688  MESLVELNLSKTGIKEIPSISFKHMTSLKILKLDGTP-LKELPSSIQFLTRLQSLDMSGC 746

Query: 60   FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             K E+  +    +ESL EL+++GT ++  PSSI  +  L++L   GC+   S     +P 
Sbjct: 747  SKLESFPQITVPMESLAELNLNGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPEITVP- 805

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                                 + SL +L+LS  G+ E  +P  I ++  LK L L     
Sbjct: 806  ---------------------MESLAELNLSKTGIKE--LPLSIKDMVCLKKLTLEGTPI 842

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTL-----LGALKL 233
              LP SI  +  LE+L L     +++LP QLPP++  +R   C+SL T+     +G L+L
Sbjct: 843  KELPLSIKDMVCLEELTLHGTP-IKALPDQLPPSLRYLRTRDCSSLETVPSIINIGRLQL 901

Query: 234  RKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEG 293
            R       DF +  K + +  L  +M  +       P     +V+PGSEIP+WF  +  G
Sbjct: 902  R------WDFTNCFK-VDQKPLIEAMHLKIQSGEEIPRGGIEMVIPGSEIPEWFGDKGVG 954

Query: 294  SSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY--RYPHPAH--VLHCSMDEKF 349
            SS+T+  PS   N +Q+ G A C VF +P  S  +   Y  +Y +  H       +  K 
Sbjct: 955  SSLTIQLPS---NRHQLKGIAFCLVFLLPPPSQDLYCDYHVKYKNGEHDAASRKVISYKL 1011

Query: 350  GHRGSDHLWLLY 361
            G   SDH+ L Y
Sbjct: 1012 GTCDSDHMILQY 1023



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 35/231 (15%)

Query: 4   LRELLLDKTD-IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR + L K+  + E+P  + +   LV L LK C +L  +PS++  L  L+ +NL  C+  
Sbjct: 482 LRTIDLSKSSYLTELP-DLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNL 540

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +      +V     +D       CP  S    +N+K+L   G      ++   +P  I 
Sbjct: 541 RSFPMLYSKVLRKLSIDQCLDLTTCPTIS----QNMKSLRLWG------TSIKEVPQSIT 590

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                   G L +  L G   +TK             P   G++  L   +LS+     +
Sbjct: 591 --------GKLKVLDLWGCSKMTKF------------PEVSGDIEEL---WLSETAIQEV 627

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
           P+SI  L  L +L++  C +L+SLP++   +E + ++  + ++ + G  KL
Sbjct: 628 PSSIQFLTRLRELEMNGCSKLESLPEITVPMESLDLSQDSVILDMSGCSKL 678


>gi|147792369|emb|CAN74711.1| hypothetical protein VITISV_009242 [Vitis vinifera]
          Length = 1354

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 199/456 (43%), Gaps = 76/456 (16%)

Query: 3    CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            C R+     +D+ E+P+    L  L  L L+ CKNL  LPS+I   KSL  L+  GC + 
Sbjct: 926  CRRKRCFKGSDMNEVPIMENPLE-LDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQL 984

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS------- 111
            E+  E V  +ESL +L + GTAIR  PSSI  ++ L++L    C    N P S       
Sbjct: 985  ESFPEIVQDMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSF 1044

Query: 112  ----SASC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGE 156
                 + C  +   P NL R  S         D     LPSLSGL SL  L L  C L E
Sbjct: 1045 KTLVVSRCPNFNKLPDNLGRLQSLEHLFIGYLDSMNFQLPSLSGLCSLRILMLQACNLRE 1104

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
              IPS+I  L SL TLYL  N+F  +P  I+ L+NL+   L  CK LQ +P+LP  +  +
Sbjct: 1105 --IPSEIYYLSSLVTLYLMGNHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYL 1162

Query: 217  RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
              + C SL  L     L  SS                       +  ++ V   +   + 
Sbjct: 1163 DAHHCTSLENLSSQSSLLWSS------------------LFKCFKSQIQGVEVGAIVQTF 1204

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP------KH-STGIR 329
            +   + IP+W  +Q  G  IT+  P      +  +G+  C + HVP      KH S   +
Sbjct: 1205 IPQSNGIPEWISHQKSGFQITMELPWSWYENDDFLGFVLCSL-HVPFDTDTAKHRSFNCK 1263

Query: 330  RFYRYPHPAHVL---------HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHF 380
              + +   + +L          C  DE   ++G    WL+Y  +     N+   + SN +
Sbjct: 1264 LNFDHDSASFLLDVIRFKQSCECCYDEDESNQG----WLIYYSKS----NIPKKYHSNEW 1315

Query: 381  RLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVE 416
            R +       H     G   KV+RCGFH  Y H+ E
Sbjct: 1316 R-TLKASFYGHSSNRPG---KVERCGFHFLYAHDYE 1347



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 98/191 (51%), Gaps = 22/191 (11%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC NL  LP  I  LK L+TL+  GC K E   E  G +  L  LD+SGTAI   P
Sbjct: 548 LTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSGTAIMDLP 607

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
           SSI  +  L+TL    C       S     PI++                 L SL  LDL
Sbjct: 608 SSISHLNGLQTLLLEDC-------SKLHKIPIHICH---------------LSSLEVLDL 645

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
            +C + EG IPSDI +L SL+ L L   +F  +PA+IN L  L+ L L  C  L+ +P+L
Sbjct: 646 GNCNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIPEL 705

Query: 210 PPNVEKVRVNG 220
           P ++  +  +G
Sbjct: 706 PSSLRLLDAHG 716



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 1/108 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P +I  L SL+ L+L  C 
Sbjct: 590 MGKLRVLDLSGTAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNCN 649

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
             E  + + +  + SL++L++ G    C P++I  +  LK L+   CN
Sbjct: 650 IMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCN 697


>gi|449447549|ref|XP_004141530.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
 gi|449481488|ref|XP_004156198.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1009

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 134/227 (59%), Gaps = 7/227 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ ++EL LD T I+++ +SI  L+ LV L L+ CKNL  LP+ I  L S++ L L GC 
Sbjct: 736 MKLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCS 795

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + + +++G +  L++LD+SGT+I   P ++ L+KNL+ L+  G     S   CY  F 
Sbjct: 796 KLDKIPDSLGNISCLKKLDVSGTSISHIPFTLRLLKNLEVLNCEGL----SRKLCYSLFL 851

Query: 121 INLMRRSSD---LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           +    R+++    G  ++  L+   S+  L+ SDC L +G IP D+  L SL  L LS+N
Sbjct: 852 LWSTPRNNNSHSFGLWLITCLTNFSSVKVLNFSDCKLVDGDIPDDLSCLSSLHFLDLSRN 911

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            F  LP S++ L NL  L L++C RL+SLP+ P ++  V    C SL
Sbjct: 912 LFTNLPHSLSQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSL 958


>gi|297794743|ref|XP_002865256.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311091|gb|EFH41515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 164/345 (47%), Gaps = 38/345 (11%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E +  L LD T IK +P SI+ L  L  L LK C  L  LPSN+  +KSL+ L L GC K
Sbjct: 617 ENIESLYLDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSK 676

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            +   E    +E LE L +  TAI+  P  +  M NLK  +F G     S+    LPF  
Sbjct: 677 LKCFPEIDEDMEHLEILLMDDTAIKQIPIKM-CMSNLKMFTFGGSKFQGSTGYELLPF-- 733

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                            SG   L+ L L+DC L +  +P++   L S+ +L LS+NN   
Sbjct: 734 -----------------SGCSHLSDLYLTDCNLHK--LPNNFSCLSSVHSLCLSRNNLEY 774

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSSC 238
           LP SI  L +L+ L L+ C++L SLP LP N++ +  + CASL T+   +  L L +   
Sbjct: 775 LPESIKILHHLKSLDLKHCRKLNSLPVLPSNLQYLDAHDCASLETVANPMTHLVLAERVQ 834

Query: 239 TIIDFVDSLKL---LGKNGLAISMLRE--FLEVVSAPSHK-------FSIVVPGSEIPKW 286
           +   F D  KL     +N +A + L+           +HK        S+  PGS++P W
Sbjct: 835 STFLFTDCFKLNREAQENIVAHAQLKSQILANACLKRNHKGLVLEPLASVSFPGSDLPLW 894

Query: 287 FMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
           F  Q  G+SI    P + C+ ++  G + C V     +     RF
Sbjct: 895 FRNQRMGTSIDTHLPPHWCD-SKFRGLSLCVVVSFKDYEDQTSRF 938


>gi|359489175|ref|XP_002264704.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1254

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 203/451 (45%), Gaps = 58/451 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L  L+L  T IKE+P SI  L+GL +L+L  CKNL RLPS+I  L+ L  + L GC 
Sbjct: 785  MKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCS 844

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
              E   + +  +E++  L++ GT+++  P SI  +K L+ L    C      PSS     
Sbjct: 845  NLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEELDLTNCENLVTLPSSICNIR 904

Query: 118  PFPINLMRRSSDLG-------ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                 +++  S L         L    + GL SL  L+LS C L  GAIPSD+  L SL+
Sbjct: 905  SLERLVLQNCSKLQELPKNPMTLQCSDMIGLCSLMDLNLSGCNLMGGAIPSDLWCLSSLR 964

Query: 171  TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA 230
             L LS +N   +P+ I+    L  L+L  CK L+S+ +LP ++  +  + C         
Sbjct: 965  RLNLSGSNIRCIPSGIS---QLRILQLNHCKMLESITELPSSLRVLDAHDCT-------- 1013

Query: 231  LKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMY 289
               R  + + +  +    L      AI  L   +E  S+ S   +IV+PGS  IP+W   
Sbjct: 1014 ---RLDTLSSLSSLLQCSLFSCFKSAIQELEHGIE--SSKSIGINIVIPGSRGIPEWISN 1068

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHST----GIR---------RFYRYPH 336
            Q  GS +TV  P   C  N  +G+A C ++ VP        G+          +F R   
Sbjct: 1069 QELGSEVTVELPMNWCEDNDFLGFALCSLY-VPLDDAFEDGGLECRLIAFHGDQFRRVDD 1127

Query: 337  PAHVLHCSMDEKFG----HRGSDH-------LWLLYLPRQSYYCNVKWHFESNHFRLSFM 385
                  C   E  G    H+  D+       LW+ Y P+ +    +K    SN +R  F 
Sbjct: 1128 IWFKSSCKYYENGGVSYLHKCCDNGDVSDCVLWVTYYPQIA----IKKKHRSNQWR-HFK 1182

Query: 386  DEREKHCPAGSGTGLKVKRCGFHPGYMHEVE 416
                     GS    KVK+CG H  Y  + +
Sbjct: 1183 ALFNGLYNCGS-KAFKVKKCGVHLIYAQDFQ 1212



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 43/248 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR++ L+++ IKE+P SIE L                        +SL+ L L  C 
Sbjct: 738 MRHLRKIYLNQSGIKELPTSIEFL------------------------ESLEMLQLANCS 773

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
            FE   E    ++SL  L + GTAI+  PSSI+ +  L+ LS   C      PSS  C L
Sbjct: 774 NFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSI-CRL 832

Query: 118 PFPINL-MRRSSDLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            F   + +   S+L A   ++  +  +G   +L+L    L E  +P  I +L  L+ L L
Sbjct: 833 EFLHGIYLHGCSNLEAFPDIIKDMENIG---RLELMGTSLKE--LPPSIEHLKGLEELDL 887

Query: 175 SK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
           +   N VTLP+SI  + +LE+L L++C +LQ LP+ P  ++      C+ ++ L   + L
Sbjct: 888 TNCENLVTLPSSICNIRSLERLVLQNCSKLQELPKNPMTLQ------CSDMIGLCSLMDL 941

Query: 234 RKSSCTII 241
             S C ++
Sbjct: 942 NLSGCNLM 949



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 48/215 (22%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL L  + IK +    + L  L  + L   + L ++ S  + + +L+ LNL GC  
Sbjct: 622 ENLVELELRYSTIKRLWKGSKGLEKLKFINLSHSEKLTKI-SKFSGMPNLERLNLEGC-- 678

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
                                T++R   SS+ ++K L +L  + C    S          
Sbjct: 679 ---------------------TSLRKVHSSLGVLKKLTSLQLKDCQKLES---------- 707

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                         PS   L SL  LD+S C   E   P   GN+  L+ +YL+++    
Sbjct: 708 -------------FPSSIELESLEVLDISGCSNFE-KFPEIHGNMRHLRKIYLNQSGIKE 753

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
           LP SI  L +LE L+L +C   +  P++  +++ +
Sbjct: 754 LPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSL 788


>gi|317415953|emb|CAR94518.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2041

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 156/335 (46%), Gaps = 47/335 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNI-NSLKSLKTLNLLGC 59
            M+ LR+L LD T I+E+P SI+ L+GL  L L+ CKNL+ LP  I  SL SL+ LN+ GC
Sbjct: 708  MKQLRKLHLDGTAIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGC 767

Query: 60   FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
                 L E +G +E L+EL  S TAI+  P+SI  + +L  L+ R C             
Sbjct: 768  SNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECK------------ 815

Query: 120  PINLMRRSSDLGALMLPSL--SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              NL         L LP +  + L SL  L+LS C      +P ++G+L  LK LY S+ 
Sbjct: 816  --NL---------LTLPDVICTNLTSLQILNLSGCS-NLNELPENLGSLKCLKDLYASRT 863

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
                +P SI+ L  LE+L L+ C  LQSLP LP ++  V V  C     L GA     + 
Sbjct: 864  AISQVPESISQLSQLEELVLDGCSMLQSLPGLPFSIRVVSVQNCP---LLQGA---HSNK 917

Query: 238  CTIIDFVDSLKLLGKNG--------------LAISMLREFLEVVSAPSHKFSIVVPGSEI 283
             T+         LG+ G              L     + F E        F      +EI
Sbjct: 918  ITVWPSAAGFSFLGRQGNNDIGQAFWLPDKHLLWPFYQTFFEGAIQRGEMFEYGYRSNEI 977

Query: 284  PKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            P W   ++  S+IT+  P  L   N+ +  A C V
Sbjct: 978  PAWLSRRSTESTITIPLPHDLDGKNKWIKLALCFV 1012



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 67/167 (40%), Gaps = 31/167 (18%)

Query: 273  KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
            K++   P +EI +WF +Q+ G S+ +  PS LC     +G A C  F V  HST      
Sbjct: 1455 KYNSCFPPNEIVEWFGHQSSGPSVKIPLPSNLCEDTNWIGLALCAYFSVIDHSTTDLDNL 1514

Query: 333  RYPHPAHVLHCSMDEKFGHRGSDH------------------LWLLYLPRQSYYCNVKWH 374
              P  +H L C ++       S H                  +WL Y+PR  +   +K  
Sbjct: 1515 N-PEISHNLTCLLETDESCLESLHGYCTNSQEFEWLYCMGGFIWLSYIPRCWFSNQLK-- 1571

Query: 375  FESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
             E  H   S   +R      GS   L V RCG    Y+ + E   ET
Sbjct: 1572 -ERGHLEASIGSDR------GS---LGVHRCGLRLIYLEDEEGLKET 1608



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 41/223 (18%)

Query: 225  VTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI------VV 278
            +T L   K++   C + D V S +       +  +++  L+ +  PS  F +        
Sbjct: 1822 MTSLSDKKVKNKQCPMGDTVSSSRP------SSYIVKPHLKRLGRPSWDFDLHSIYNSCF 1875

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPA 338
            P S   +WF  Q+  SS T+  P  L   +  +G A C  F V +H T        P  +
Sbjct: 1876 PSSITLEWFGRQSNDSSATILLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAIS 1935

Query: 339  HVLHCSMDEKFGHRGSDH-----------------LWLLYLPRQSYYCNVKWHFESNHFR 381
            H L C+++       S H                 +W+ Y+PR  +   +    E     
Sbjct: 1936 HHLICNLESDRDSLESLHDYCTTNEEFLWLHFGGFVWVSYIPRAWFSDQLN---ECGVLE 1992

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
             S   + E            V++CG    Y H+ EEF +T  +
Sbjct: 1993 ASIASDHE---------AFSVQKCGLRLVYQHDEEEFKQTISR 2026



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 30/165 (18%)

Query: 274  FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR 333
            ++   P S   +WF  Q+ GSSI V  P +L +    +G+A C  F + ++ T       
Sbjct: 1666 YNFCFPSSITLEWFGDQSSGSSIRVPLPPHLYSATNWIGFALCASFSIMENPTADLDNLN 1725

Query: 334  YPHPAHVLHCSMDEKFGHRGSDH-----------------LWLLYLPRQSYYCNVKWHFE 376
             P  +H L C ++   G     H                 +W+ Y+PR  +   +    E
Sbjct: 1726 -PEISHHLICHLESDRGTIEPLHDYCTTNEEFQWLPFGGFIWVSYIPRVWFSDQLN---E 1781

Query: 377  SNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
             +    SF  + E            V  CG    Y H+ EE  +T
Sbjct: 1782 CDILEASFASDHE---------AFIVHECGLRLVYQHDEEEIKQT 1817


>gi|356545124|ref|XP_003540995.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1116

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 199/451 (44%), Gaps = 52/451 (11%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+ LL  L  L LK CKNLV LP+NI  L SL+ LN+ GC K                  
Sbjct: 701  SVGLLRKLAFLNLKNCKNLVSLPNNILGLSSLEYLNISGCPKI----------------- 743

Query: 80   ISGTAIRCPPSSIF-LMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSL 138
             S   +  P +  + ++ N++  + +  +   S    ++PF  +  R S + G  +LPSL
Sbjct: 744  FSNQLLENPINEEYSMIPNIRETAMQSQSTSSSIIKRFIPFHFSYSRGSKNSGGCLLPSL 803

Query: 139  SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
                 L  LDLS C L +  IP  IG++ SL+TL L  N FV+LP++IN L  L  L LE
Sbjct: 804  PSFSCLHDLDLSFCNLSQ--IPDAIGSILSLETLNLGGNKFVSLPSTINKLSKLVHLNLE 861

Query: 199  DCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAIS 258
             CK+L+ LP++P       + G  S       L +   +C  I  ++  +     G+A S
Sbjct: 862  HCKQLRYLPEMPTPTALPVIRGIYSFAHYGRGLII--FNCPKIVDIERCR-----GMAFS 914

Query: 259  MLREFLEV---VSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAA 315
             L + L+V    + P     I+VPG++IP+WF  +  G+SI++  PS +   N  +G A 
Sbjct: 915  WLLQILQVSQESATPIGWIDIIVPGNQIPRWFNNRCVGNSISLD-PSPIMLDNNWIGIAC 973

Query: 316  CRVFHVPKHSTGIRRFYR-----------YPHPAHVLHCS--MDEKFGHRGSDHLWLLYL 362
              VF V    T +   ++           Y      L+    +D         HLWLLYL
Sbjct: 974  SVVFVVFDDPTSLDNDWKSSISIGFETKSYSSRGSPLYIPILLDRNLVTVKLHHLWLLYL 1033

Query: 363  PRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETT 422
             R  ++     +F+       +  +         G  L+V  CG+   +  +++  + T 
Sbjct: 1034 TRGEFFS----YFKIEKMLDLYGIKMHAMVDNSQGLHLEVCSCGYQWVFEEDLQNLNPTI 1089

Query: 423  KQWTRFTSYNLNEFHHDFVGSNMAVAKANGS 453
             +      Y+      DFV     ++   GS
Sbjct: 1090 MR----RGYSNIPVDDDFVNGGSILSLEAGS 1116


>gi|38489219|gb|AAR21295.1| bacterial spot disease resistance protein 4 [Solanum lycopersicum]
          Length = 1146

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 147/311 (47%), Gaps = 44/311 (14%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            +L   T I E+P S++  + L +L L G +NL  LPS+I  LK L  LN+  C   ++L 
Sbjct: 753  ILSANTMITELPSSLQYPTHLTELDLSGMENLEALPSSIVKLKDLVKLNVSYCLTLKSLP 812

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            E +G +E+LEELD S T I  PPSSI  +  LK+L     N       C++  P+N    
Sbjct: 813  EEIGDLENLEELDASRTLISQPPSSIVRLNKLKSLKLMKRNTLTDDV-CFVFPPVN---- 867

Query: 127  SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                        +GL SL  L+L      +G IP DIG L SLK L L  +NF  LP SI
Sbjct: 868  ------------NGLLSLEILELGSSNFEDGRIPEDIGCLSSLKELRLEGDNFNHLPQSI 915

Query: 187  NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT-IIDFVD 245
              L  L  L ++DC+ L SLP+ PP ++ +  +    L+    +L L  SS    I   D
Sbjct: 916  AQLGALRFLYIKDCRSLTSLPEFPPQLDTIFADWSNDLIC--KSLFLNISSFQHNISASD 973

Query: 246  SLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLC 305
            SL            LR F  +             GS IP WF +Q   +S++V  P    
Sbjct: 974  SLS-----------LRVFTSL-------------GSSIPIWFHHQGTDTSVSVNLPENWY 1009

Query: 306  NMNQVVGYAAC 316
              +  +G+A C
Sbjct: 1010 VSDNFLGFAVC 1020


>gi|356515118|ref|XP_003526248.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1010

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 155/316 (49%), Gaps = 36/316 (11%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-FEN-LLETV 69
           T++  +  S+ LL  L  L LK C +LV LPSNI SL SL  LN+ GC K F N LLE  
Sbjct: 663 TNLARIHPSVGLLRKLAFLNLKNCISLVSLPSNILSLSSLGYLNISGCPKVFSNQLLEKP 722

Query: 70  GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRR 126
              E  +  DI  TA++   +S  + K L  L+FR      G  +SA C           
Sbjct: 723 IHEEHSKMPDIRQTAMQFQSTSSSIFKRLINLTFRSSYYSRGYRNSAGC----------- 771

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                  +LPSL     +  LDLS C L +  IP  IG++HSL+TL L  NNFV+LP SI
Sbjct: 772 -------LLPSLPTFFCMRDLDLSFCNLSQ--IPDAIGSMHSLETLNLGGNNFVSLPYSI 822

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
           N L  L  L LE CK+L+  P++P       +    +       L +      I+D    
Sbjct: 823 NQLSKLVHLNLEHCKQLRYFPEMPSPTSLPVIRETYNFAHYPRGLFIFNCP-KIVDIARC 881

Query: 247 LKLLGKNGLAISMLREFLEVVSAPSHK---FSIVVPGSEIPKWFMYQNEGSSITVTRPSY 303
                  G+  + + + L+V      +     IVVPG++IPKWF  Q+ G+SI++  PS 
Sbjct: 882 W------GMTFAWMIQILQVSQESDTRIGWIDIVVPGNQIPKWFNNQSVGTSISLD-PSP 934

Query: 304 LCNMNQVVGYAACRVF 319
           + + N  +G A C VF
Sbjct: 935 IMHGNHWIGIACCVVF 950


>gi|408537090|gb|AFU75198.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 136/228 (59%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  LPS+I  +K LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRVKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KN K LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++P AS + L  L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASKSRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|224062613|ref|XP_002300861.1| predicted protein [Populus trichocarpa]
 gi|222842587|gb|EEE80134.1| predicted protein [Populus trichocarpa]
          Length = 647

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 188/439 (42%), Gaps = 70/439 (15%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI LLS L  L L+ C +L  LP +I +L SLK LN+ GC K E L E +G ++SL  L 
Sbjct: 135 SIGLLSHLQFLNLQDCVDLKNLPGSICALSSLKKLNVSGCSKLEELPEHLGSLQSLVLLL 194

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
              TAI   P +I  +KNL+ LS  GC    S   C                    P+  
Sbjct: 195 ADETAISTLPETIGDLKNLEKLSLHGCRLIFSPRKCP-------------------PTRR 235

Query: 140 GL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           GL  SL +LDL  C L +  IPSD+  L  L+ L L +NNF +LPASI  L  L +L L 
Sbjct: 236 GLPASLLELDLGHCNLTDDMIPSDLQGLPLLQNLKLCRNNFTSLPASIGSLPKLTRLWLN 295

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASLVTL-----LGALKLRKSSCTIIDFVDSL------ 247
           +CK LQ +P+L  +++ +    C SL T+      G   L    C  +  ++        
Sbjct: 296 ECKSLQCIPELQSSLQLLHAKDCLSLETINLKNFWGEGTLELDGCPKLKAIEGYFNLESL 355

Query: 248 ------KLLGKNGL------------AISMLREFLEV--VSAPSHK--FSIVVPGSEIPK 285
                 K LG  GL             I+ L     +  + A S K  +SI +P S+IP 
Sbjct: 356 GIEIVEKYLGTCGLFTEDSLPSINVHVINNLTRAATISPLQALSEKSIYSIFLPMSDIPT 415

Query: 286 WFMYQNEGSSITVTRP--SYLC-----NMNQVVGY----AACRVFHVPKHSTGIRRFYRY 334
           WF +QNEG S+++  P   + C     +++ V  +    A C    +   +   + F+  
Sbjct: 416 WFSHQNEGDSVSLQVPPLDHGCKFSGFSISAVYAWESSSAPCFFCPIIAVTNRTKNFHWN 475

Query: 335 PHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPA 394
             P         E+      D +WL     ++    +     S  FR    +        
Sbjct: 476 YSPKITFFMREVEQ------DLMWLSCWSFENQVEGIDDEDMSWRFRDEMEEGDRLDVWI 529

Query: 395 GSGTGLKVKRCGFHPGYMH 413
             G  + VKRCG H  Y H
Sbjct: 530 DIGFRIAVKRCGIHLLYHH 548


>gi|408537060|gb|AFU75183.1| nematode resistance-like protein, partial [Solanum bulbocastanum]
          Length = 307

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 140/228 (61%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK L TL++ GC 
Sbjct: 71  MNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLXTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELXCTHTAIQXIPSSMSLLKNLKHLSLSGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L++LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPAASISRLTRLKRLKLLGCGRLESLPELPPSIKGIYANECTSLMSI 290



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 110/258 (42%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+   IE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFXIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T++   P+S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C   +  +P D+G L  L+ L  +      +P+
Sbjct: 117 R---------------LKCLXTLDVSGCSKLKN-LPDDLGLLVGLEELXCTHTAIQXIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL+ L L  C  L S      + +K       +L  L   + L  S C I D  
Sbjct: 161 SMSLLKNLKHLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL++L  NG
Sbjct: 221 ILSNLGFLPSLEILILNG 238


>gi|357500727|ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula]
 gi|355495667|gb|AES76870.1| Elongation factor Ts [Medicago truncatula]
          Length = 2436

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 185/393 (47%), Gaps = 55/393 (13%)

Query: 30   LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCP 88
            L L+ CKNLV L  +I  L+ L  LNL GC K   L  ++G +  L  L++     +   
Sbjct: 653  LDLELCKNLVELDPSIGLLRKLVYLNLGGCKKLVELDPSIGLLRKLVCLNVKDCENLVSI 712

Query: 89   PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD 148
            P++IF + +L+ L+  GC+   +++   LP P             +LPSL  L  L  +D
Sbjct: 713  PNNIFDLSSLEYLNMNGCSKVFNNS---LPSPTR--------HTYLLPSLHSLDCLRGVD 761

Query: 149  LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            +S C L +  +P  I +LH L+ L L  NNFVTLP S+  L  L  L LE CK L+SLPQ
Sbjct: 762  ISFCNLSQ--VPDAIEDLHWLERLNLKGNNFVTLP-SLRKLSELVYLNLEHCKLLESLPQ 818

Query: 209  LPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL-----LGK----NGLAISM 259
            LP               T +G    R+      D++  L +     LG+    + +  S 
Sbjct: 819  LPSP-------------TTIG----RERDENDDDWISGLVIFNCSKLGERERCSSMTFSW 861

Query: 260  LREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAACRV 318
            + +F  +++ P     IV+PGSEIP W   Q  G SI +   P+   N NQ   +  C V
Sbjct: 862  MIQF--ILANPQSTSQIVIPGSEIPSWINNQCVGDSIQIDLSPAMHDNNNQSHYFVCCAV 919

Query: 319  F-HVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHF-- 375
            F  VP+ S  +   +       +   S++       S HLW+ Y+PR SY  N   +F  
Sbjct: 920  FTMVPQLSANMLLIFDNSSIMWI-PISINRDLVTTESSHLWIAYIPRDSYPENGNMYFKM 978

Query: 376  ESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFH 408
            E +  +L  ++E E       G G +VK CG+ 
Sbjct: 979  EISIIKLLGIEESE-------GLGFEVKSCGYR 1004



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 13/208 (6%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL+L  +DIK++  + + L  L +L L+  +NL ++  +     +L+ LNL  C    
Sbjct: 1969 LVELILMYSDIKQLWKNKKYLPNLRRLDLRHSRNLEKI-VDFGEFPNLEWLNLELCANLV 2027

Query: 64   NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L  ++G +  L  L++ G   +   P++I  + +L+ L+  GC+   SS+S  LP P  
Sbjct: 2028 ELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSKAFSSSSIMLPTP-- 2085

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
             MR +      +LPS+  L  L K+D+S C L +  +P  I  LHSL+ L L  N+FVTL
Sbjct: 2086 -MRNT-----YLLPSVHSLNCLRKVDISFCHLNQ--VPDSIECLHSLEKLNLGGNDFVTL 2137

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLP 210
            P S+  L  L  L LE CK L+S PQLP
Sbjct: 2138 P-SLRKLSKLVYLNLEHCKFLKSFPQLP 2164


>gi|51477389|gb|AAU04762.1| MRGH21 [Cucumis melo]
          Length = 1020

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/227 (44%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L++T IK +  SI  L+ LV L LK C NL++LPS I SL SLKTLNL GC 
Sbjct: 739 MNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCS 798

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K ++L E++G + SLE+LDI+ T +   P S  L+  L+ L+ +G     S    +  FP
Sbjct: 799 KLDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGL----SRKFLHSLFP 854

Query: 121 I-NLMRRSSDLG-ALMLPSLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
             N  R+ S+    L + +    G SL  L+LSDC L +G +P+D+ +L SL+ L+LSKN
Sbjct: 855 TWNFTRKFSNYSQGLRVTNWFTFGCSLRILNLSDCNLWDGDLPNDLHSLASLQILHLSKN 914

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           +F  LP SI  L NL  L L +C  L SLP+LP +V  V    C SL
Sbjct: 915 HFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVRDVEARDCVSL 961



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 68/331 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L+ + L  +          ++  L +L L GC  L +L  ++ +LK L  L+L  C 
Sbjct: 645 METLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDLRNCK 704

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  N+                       P +I L ++LK L   GC       S    FP
Sbjct: 705 KLTNI-----------------------PFNICL-ESLKILVLSGC-------SSLTHFP 733

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
               + SS++  L+           +L L +  +    + S IG+L SL  L L    N 
Sbjct: 734 ----KISSNMNYLL-----------ELHLEETSI--KVLHSSIGHLTSLVVLNLKNCTNL 776

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
           + LP++I  L +L+ L L  C +L SLP+   N+  +      S       +  +     
Sbjct: 777 LKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGNISSLEKLDITSTCVNQAPMSFQ----- 831

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
               +  L++L   GL+   L       +  + KFS    G  +  WF +   G S+ + 
Sbjct: 832 ---LLTKLEILNCQGLSRKFLHSLFPTWNF-TRKFSNYSQGLRVTNWFTF---GCSLRIL 884

Query: 300 RPSYLCNM------NQVVGYAACRVFHVPKH 324
             S  CN+      N +   A+ ++ H+ K+
Sbjct: 885 NLSD-CNLWDGDLPNDLHSLASLQILHLSKN 914


>gi|359477825|ref|XP_002282820.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1292

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 196/454 (43%), Gaps = 76/454 (16%)

Query: 3    CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            C R+     +D+ E+P+    L  L  L L+ CKNL  LPS+I   KSL  L+  GC + 
Sbjct: 873  CRRKRCFKGSDMNEVPIMENPLE-LDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQL 931

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS------- 111
            E+  E V  +E L +L + GTAIR  PSSI  ++ L++L    C    N P S       
Sbjct: 932  ESFPEIVQDMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSF 991

Query: 112  ----SASC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGE 156
                 + C  +   P NL R  S         D     LPSLSGL SL  L L  C L E
Sbjct: 992  KTLVVSRCPNFNKLPDNLGRLQSLEHLFVGYLDSMNFQLPSLSGLCSLRILMLQACNLRE 1051

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
               PS+I  L SL  LYL  N+F  +P  I+ L+NL+   L  CK LQ +P+LP  +  +
Sbjct: 1052 --FPSEIYYLSSLVMLYLGGNHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYL 1109

Query: 217  RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
              + C SL  L     L  SS                      L+  ++ V   +   + 
Sbjct: 1110 DAHHCTSLENLSSQSSLLWSS------------------LFKCLKSQIQGVEVGAIVQTF 1151

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP------KH-STGIR 329
            +   + IP+W  +Q  G  IT+  P      +  +G+  C + HVP      KH S   +
Sbjct: 1152 IPESNGIPEWISHQKSGFQITMELPWSWYENDDFLGFVLCSL-HVPLDTETAKHRSFNCK 1210

Query: 330  RFYRYPHPAHVL---------HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHF 380
              + +   + +L          C  DE   ++G    WL+Y  +     N+   + SN +
Sbjct: 1211 LNFDHDSASFLLDVIRFKQSCECCYDEDESNQG----WLIYYSKS----NIPKKYHSNEW 1262

Query: 381  RLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE 414
            R +       H     G   KV+RCGFH  Y H+
Sbjct: 1263 R-TLKASFYGHSSNKPG---KVERCGFHFLYAHD 1292


>gi|147856100|emb|CAN82453.1| hypothetical protein VITISV_003327 [Vitis vinifera]
          Length = 762

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 221/509 (43%), Gaps = 123/509 (24%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           MECL++L LD T IKE+P SI+ LS LV+   + CKNL  LP +I  LK L+ L    C 
Sbjct: 190 MECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCS 249

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSI-------FL-----------------MK 96
           K  +  E +  + +L EL + GTAI+  PSSI       FL                 +K
Sbjct: 250 KLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLK 309

Query: 97  NLKTLSFRGCNGPPSSASCYLPFPINLMR-----RSSDLGALM--LPSLSGLGSLTKLDL 149
           +LKTL   GC     S    LP  +  ++      +  LG++   LPS SGL SL  L L
Sbjct: 310 SLKTLHVYGC-----SKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLCSLRILHL 364

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLS-------------------------KNNFVTLPA 184
           +   L + +I  DI  L+SL+ L L+                         +N+   +PA
Sbjct: 365 NGLNLMQWSIQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLSRNHISKIPA 424

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
            I+ L  L+ L    C+    +P+LP ++  + V+ C  L+TL     L         F 
Sbjct: 425 GISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITLSNPSSL---------FW 475

Query: 245 DSLKLLGKNGL-AISMLREFLEVVSAPSHKF-----------------SIVVP-GSEIPK 285
            SL    K+ + A ++   F++ +   +H +                 SI++P  S IP+
Sbjct: 476 ASLFKCFKSAIQAWNLHATFVQDLECGNHCYDPSPEAWPDFCYFGQGISILIPRSSGIPE 535

Query: 286 WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHC-- 343
           W  +Q  GS +T   P Y      ++G+A   V H+P  +  +        P   L C  
Sbjct: 536 WIRHQKNGSRVTTELPRYWYKNKDLLGFALFSV-HIPLDNESVDISEDEDLPCCSLKCEL 594

Query: 344 -------------SMD---EKFGHRG-SDHLWLLYLPRQSYYCNVKWHFESNHFR---LS 383
                        S+D   E + + G S  +W+LY P+ +    +K  + SN +R    S
Sbjct: 595 TFRGDQFAFLDDLSLDSWCECYKNDGASGQVWVLYYPKVA----IKEKYHSNKWRRLKAS 650

Query: 384 FMDEREKHCPAGSGTGLKVKRCGFHPGYM 412
           F      HC   +GT +KV++CG    Y+
Sbjct: 651 F------HCYL-NGTPVKVEKCGMQLIYV 672


>gi|105922786|gb|ABF81437.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1289

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 137/290 (47%), Gaps = 90/290 (31%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+CL  L LD T I ++  S+  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 842  MKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 901

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            + + + E +G+VESLEE D                 NLK LS  G               
Sbjct: 902  ELKYIPEKLGEVESLEEFD-----------------NLKVLSLDG--------------- 929

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                +R      +M PSLSGL SL  L L  C L EGA+P DIG L SL++L LS+NNFV
Sbjct: 930  ---FKR-----IVMPPSLSGLCSLEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNFV 981

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            +LP SIN LF LE L LEDC  L+SLP++P  V+                          
Sbjct: 982  SLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQ-------------------------- 1015

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
                         GL            S P   F I +PG+EIP WF +Q
Sbjct: 1016 ------------TGL------------SNPRPGFGIAIPGNEIPGWFNHQ 1041


>gi|408537070|gb|AFU75188.1| nematode resistance-like protein, partial [Solanum demissum]
          Length = 307

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/228 (44%), Positives = 139/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG   + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGXGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LE L  + TAI+  PSS+ L+KNLK LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEXLHCTHTAIQXIPSSMSLLKNLKXLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCXISDGGILSNLGFLPSLEJLILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPDASISRLTRLKXLKLHXCXRLESLPELPPSIKXIXANXCTSLMSI 290



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 111/258 (43%), Gaps = 32/258 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  T++   P+S+  +     ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLGATSLSELPASVENLSGXGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C   +  +P D+G L  L+ L+ +      +P+
Sbjct: 117 R---------------LKCLKTLDVSGCSKLKN-LPDDLGLLVGLEXLHCTHTAIQXIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID-- 242
           S++ L NL+ L L  C  L S      + +K       +L  L   + L  S C I D  
Sbjct: 161 SMSLLKNLKXLSLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCXISDGG 220

Query: 243 ------FVDSLKLLGKNG 254
                 F+ SL+JL  NG
Sbjct: 221 ILSNLGFLPSLEJLILNG 238


>gi|255544956|ref|XP_002513539.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223547447|gb|EEF48942.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1403

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 216/483 (44%), Gaps = 87/483 (18%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L +L +   DI+E+P S+  LS LV+  L+    L  LPS+I  L SL  LNL    
Sbjct: 870  LSSLVKLNIAVVDIEELPSSLGQLSSLVEFNLEK-STLTALPSSIGCLTSLVKLNL-AVT 927

Query: 61   KFENLLETVGQVESLEELDISGTAIRCP-----PSSIFLMKNLKTLSFRGCNGPPSSASC 115
            + + L  ++G + SL EL++S    +CP     P SI  +K L+ L   G     S    
Sbjct: 928  EIKELPPSIGCLSSLVELNLS----QCPMLGSLPFSIGELKCLEKLYLCGLRRLRS---- 979

Query: 116  YLPFPINLMRRSSDL------GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSL 169
             +P  I  ++R  D+          LPSLSG  SL  L LS  G+ +  +P  +G L SL
Sbjct: 980  -IPSSIRELKRLQDVYLNHCTKLSKLPSLSGCSSLRDLVLSYSGIVK--VPGSLGYLSSL 1036

Query: 170  KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLG 229
            + L L  NNF+ +PA+I  L  LE L +  CKRL++LP+LP  +  +  + C SL T+  
Sbjct: 1037 QVLLLKGNNFMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVLVAHNCTSLKTVSS 1096

Query: 230  ALKLRKSS---------------CTIID------FVDSLKLLGKNGLA---ISMLREFLE 265
             L   + S               C  ++       V+S  LL    LA   + +L  + E
Sbjct: 1097 PLIQFQESQEQSPDDKYGFTFANCVSLEKNARSNIVES-ALLKTQHLATAVLELLTSYEE 1155

Query: 266  VVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHS 325
            ++ +P     +  PGSEIP+ F YQN G+S+T   PS   N N++VG+  C V  +    
Sbjct: 1156 ILVSP----VVCFPGSEIPECFRYQNTGASVTTLLPSKWHN-NKLVGFTFCAVIELEN-- 1208

Query: 326  TGIRRFYRYPHPAHVLHCS-------------MDEKFGHRG------SDHLWL-----LY 361
                   R+        C                ++ G  G      +DH++L     +Y
Sbjct: 1209 -------RHYQDGFTFQCDCRIENEYGDSLEFTSKEIGEWGNQFEFETDHVFLWNTSCIY 1261

Query: 362  LPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
            +  +  Y  ++ +  +  F  +   E E           KVK  GF+P Y  + +E+D +
Sbjct: 1262 ILTEERYEQLRKNSCTAIFEFACYTEDEYKVMLPGANSFKVKNSGFNPVYAKDEKEWDLS 1321

Query: 422  TKQ 424
              Q
Sbjct: 1322 IDQ 1324



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 114/236 (48%), Gaps = 31/236 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +++L+  T + E+P SI+ L  LV L+L  CK L  LPS I  LK LKTLNL  C   
Sbjct: 669 LEKIILNNCTSLLEIPSSIQCLRKLVCLSLSNCKELQSLPSLI-PLKYLKTLNLSSCSNL 727

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---------------- 106
           +   E  G++   EEL + GT +   PSS+  +  L+ LS   C                
Sbjct: 728 KKFPEISGEI---EELHLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSIHLNSLD 784

Query: 107 NGPPSSASCYLPFP-----INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPS 161
           N   S  S    FP     I  +         +  S+  L SLTKL+L D  + E  +PS
Sbjct: 785 NLDLSWCSSLKNFPDVVGNIKYLNVGHTAIEELPSSIGSLVSLTKLNLKDTEIKE--LPS 842

Query: 162 DIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE--DCKRL-QSLPQLPPNVE 214
            IGNL SL  L L +++   LP+SI CL +L KL +   D + L  SL QL   VE
Sbjct: 843 SIGNLSSLVELNLKESSIKELPSSIGCLSSLVKLNIAVVDIEELPSSLGQLSSLVE 898



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 139 SGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLK 196
           +G+  L KL L D    E  +   D+ +  +L+ + L+   + + +P+SI CL  L  L 
Sbjct: 638 TGVKHLQKLKLLDLHDSELLVTLPDLSSASNLEKIILNNCTSLLEIPSSIQCLRKLVCLS 697

Query: 197 LEDCKRLQSLPQLPP--NVEKVRVNGCASL 224
           L +CK LQSLP L P   ++ + ++ C++L
Sbjct: 698 LSNCKELQSLPSLIPLKYLKTLNLSSCSNL 727


>gi|296081086|emb|CBI18280.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 217/503 (43%), Gaps = 95/503 (18%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           C +    + +D+KE+P+ IE    L  L L+GCK L  LPS+I   KSL TL   GC + 
Sbjct: 223 CRQRGCFEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQL 281

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSA----- 113
           E+  E +  +E L++LD+ G+AI+  PSSI  ++ L+ L+   C    N P S       
Sbjct: 282 ESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSL 341

Query: 114 ------SC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGE 156
                 SC      P NL R  S         D     LPSLSGL SL  L L +CGL E
Sbjct: 342 KTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINCGLRE 401

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
             IPS I +L SL+ L L  N F + P  I+ L  L  L L  CK LQ +P+ P N+  +
Sbjct: 402 --IPSGICHLTSLQCLVLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITL 459

Query: 217 RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
             + C SL      L        I  FV  +KLL                        + 
Sbjct: 460 VAHQCTSLKISSSLLWSPFFKSGIQKFVPGVKLLD-----------------------TF 496

Query: 277 VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---------KHSTG 327
           +   + IP+W  +Q +GS IT+T P      +  +G+A C + HVP         +    
Sbjct: 497 IPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNF 555

Query: 328 IRRFYRYPHPAHVL-------HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHF 380
           I +     +P+ V+       HC +        S+ LWL+ + + S   N+   + SN +
Sbjct: 556 ICKLNFNNNPSLVVRDIQSRRHCQICRDGDE--SNQLWLIKIAK-SMIPNI---YHSNKY 609

Query: 381 RL---SFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFH 437
           R    SF ++ +          +KV+RCGF   Y  +  +   T  Q +  +       H
Sbjct: 610 RTLNASFKNDFDT-------KSVKVERCGFQLLYAQDCGQNHLTIVQGSSSS-------H 655

Query: 438 HDFVGSNMAVAKANGSGCCDDYD 460
            D  G   AV   N    CD+ +
Sbjct: 656 GDLGGHRSAVQDTND---CDNQE 675


>gi|408537082|gb|AFU75194.1| nematode resistance-like protein, partial [Solanum stoloniferum]
          Length = 307

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 137/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+P S+E  SG+  + L  CK+L  LPS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK L  RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKAIYANECTSLMSI 290



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 24/238 (10%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  +P  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILILSGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  TA+   P+S+     +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  L++S C   +  +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLNVSGCSKLKN-LPDDLGLLVGLEELHCTDTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
           S++ L NL+ L L  C  L S      + +K       +L  L   + L  S C I D
Sbjct: 161 SMSLLKNLKHLYLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISD 218


>gi|408537094|gb|AFU75200.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 134/228 (58%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  T + E+  S+E LSG+  + L  CK+L  +PS+I  LK LKTLN+ GC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +G +  LEEL  + TAI+  PSS+ L+KN K LS RGCN         L   
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSLRGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 181 TLPASINCL-FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           ++PA+       L  L L  C+RL+SLP+LPP+++ +  + C SL+++
Sbjct: 243 SIPAASKSRPTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290


>gi|147802252|emb|CAN68265.1| hypothetical protein VITISV_020931 [Vitis vinifera]
          Length = 1441

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 166/352 (47%), Gaps = 35/352 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L +L +++T I E+PLSI  L+ L  L L+ CKNL  LPS+I  LKSLK L+L  C 
Sbjct: 945  MGSLLDLEIEETAITELPLSIGHLTRLNSLNLENCKNLRSLPSSICRLKSLKHLSLNCCS 1004

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYL 117
              E   E +  +E L  L++ GTAI   PSSI  +++L+ L    C      P+S     
Sbjct: 1005 NLEAFPEILEDMEHLRSLELRGTAITGLPSSIEHLRSLQWLKLINCYNLEALPNSIGNLT 1064

Query: 118  PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 ++R  S L  L     S    LT LDL  C L EG IP DI  L SL+ L +S+N
Sbjct: 1065 CLTTLVVRNCSKLHNLPDNLRSLQCCLTTLDLGGCNLMEGGIPRDIWGLSSLEFLDVSEN 1124

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
            +   +P  I  L  L  L++  C  L+ +P LP ++ ++  +GC  L TL   + +  SS
Sbjct: 1125 HIRCIPIGIIQLLKLTTLRMNHCLMLEDIPDLPSSLRRIEAHGCRCLETLSSPIHVLWSS 1184

Query: 238  C-----TIIDFVDSLKLLGKNGLAISMLREFLEVV----------------------SAP 270
                  ++I   DS  +  +N    S  ++ +++                         P
Sbjct: 1185 LLNCFKSLIQAHDSHDV--QNEEEDSHKQQDIDLALPTSSGNLDEEEDLYGGNSDEEDGP 1242

Query: 271  SHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHV 321
              +  + +PGS  IP+W  +QN+G  + +  P      N  +G+A    FH+
Sbjct: 1243 LGQIDVFIPGSSGIPEWVSHQNKGCEVRIELPMNWYEDNDFLGFAL--FFHL 1292



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 108/236 (45%), Gaps = 47/236 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
           M+ L+EL L K+ I+E+P SI  L+ L  L L  C N  +                    
Sbjct: 734 MKHLKELYLQKSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTG 793

Query: 41  ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
              LPS+I  L SL+ LBL  C  FE      G ++ L EL ++GT I+  PSSI  + +
Sbjct: 794 IKELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTS 853

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+ L+   C       S +  FP        D+ A M         L KL LS+ G+ E 
Sbjct: 854 LEILNLSKC-------SKFEKFP--------DIFANM-------EHLRKLYLSNSGIKE- 890

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
            +PS+IGNL  LK L L K     LP SI  L  L+ L L  C   +  P++  N+
Sbjct: 891 -LPSNIGNLKHLKELSLDKTFIKELPKSIWSLEALQTLSLRGCSNFEKFPEIQRNM 945



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 117/254 (46%), Gaps = 51/254 (20%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
            M+ LREL L+ T IKE+P SI  L+ L  L L  C N  +                    
Sbjct: 781  MKFLRELRLNGTGIKELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTR 840

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LPS+I SL SL+ LNL  C KFE   +    +E L +L +S + I+  PS+I  +K+
Sbjct: 841  IKELPSSIGSLTSLEILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKH 900

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-------------LGSL 144
            LK LS                F   L +    L AL   SL G             +GSL
Sbjct: 901  LKELSLDKT------------FIKELPKSIWSLEALQTLSLRGCSNFEKFPEIQRNMGSL 948

Query: 145  TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRL 203
              L++ +  + E  +P  IG+L  L +L L    N  +LP+SI  L +L+ L L  C  L
Sbjct: 949  LDLEIEETAITE--LPLSIGHLTRLNSLNLENCKNLRSLPSSICRLKSLKHLSLNCCSNL 1006

Query: 204  QSLPQLPPNVEKVR 217
            ++ P++  ++E +R
Sbjct: 1007 EAFPEILEDMEHLR 1020



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 22/232 (9%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++++  SI  +  L  L L GC+ L  LPS++   +SL+ L+L GC  F N  E    ++
Sbjct: 677 LRKLHSSIGDVKMLTYLNLGGCEKLQSLPSSM-KFESLEVLHLNGCRNFTNFPEVHENMK 735

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-----INLMR--R 126
            L+EL +  +AI   PSSI  + +L+ L    C       S +  FP     +  +R  R
Sbjct: 736 HLKELYLQKSAIEELPSSIGSLTSLEILDLSEC-------SNFKKFPEIHGNMKFLRELR 788

Query: 127 SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            +  G   LPS  G L SL  LBLS+C   E   P   GN+  L+ L+L+      LP+S
Sbjct: 789 LNGTGIKELPSSIGDLTSLEILBLSECSNFE-KFPGIHGNMKFLRELHLNGTRIKELPSS 847

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           I  L +LE L L  C + +  P +  N+E +R      +G   L + +G LK
Sbjct: 848 IGSLTSLEILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLK 899



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 87/224 (38%), Gaps = 51/224 (22%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL L K+ IK++    + L  L  + L   K L ++P   + +  L+ LNL GC  
Sbjct: 618 ENLVELHLRKSTIKQLWKRSKGLEKLKVIDLSYSKVLTKMPK-FSRMPKLEILNLEGCIS 676

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G V                       K L  L+  GC    S          
Sbjct: 677 LRKLHSSIGDV-----------------------KMLTYLNLGGCEKLQS---------- 703

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                        LPS     SL  L L+ C       P    N+  LK LYL K+    
Sbjct: 704 -------------LPSSMKFESLEVLHLNGCR-NFTNFPEVHENMKHLKELYLQKSAIEE 749

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCA 222
           LP+SI  L +LE L L +C   +  P++  N++   ++R+NG  
Sbjct: 750 LPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTG 793


>gi|359493208|ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 229/543 (42%), Gaps = 103/543 (18%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            MECL++L LD T IKE+P SI+ LS LV+   + CKNL  LP +I  LK L+ L    C 
Sbjct: 1133 MECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCS 1192

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSI-------FL-----------------MK 96
            K  +  E +  + +L EL + GTAI+  PSSI       FL                 +K
Sbjct: 1193 KLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLK 1252

Query: 97   NLKTLSFRGCNGPPSSASCYLPFPINLMR-----RSSDLGALM--LPSLSGLGSLTKLDL 149
            +LKTL   GC     S    LP  +  ++      +  LG++   LPS SGL SL  L L
Sbjct: 1253 SLKTLHVYGC-----SKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLCSLRILHL 1307

Query: 150  SDCGLGEGAIPSDIGNLHSLKTLYLS-------------------------KNNFVTLPA 184
            +   L + +I  DI  L+SL+ L L+                         +N+   +PA
Sbjct: 1308 NGLNLMQWSIQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLSRNHISKIPA 1367

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
             I+ L  L+ L    C+    +P+LP ++  + V+ C  L+TL     L  +S     F 
Sbjct: 1368 GISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITLSNPSSLFWASLFKC-FK 1426

Query: 245  DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP-GSEIPKWFMYQNEGSSITVTRPSY 303
             +++ L           E            SI++P  S IP+W  +Q  GS +T   P Y
Sbjct: 1427 SAIQDLECGNHCYDPSPEAWPDFCYFGQGISILIPRSSGIPEWIRHQKNGSRVTTELPRY 1486

Query: 304  LCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHC---------------SMD-- 346
                  ++G+A   V H+P  +  +        P   L C               S+D  
Sbjct: 1487 WYKNKDLLGFALFSV-HIPLDNESVDISEDEDLPCCSLKCELTFRGDQFAFLDDLSLDSW 1545

Query: 347  -EKFGHRG-SDHLWLLYLPRQSYYCNVKWHFESNHFR---LSFMDEREKHCPAGSGTGLK 401
             E + + G S  +W+LY P+ +    +K  + SN +R    SF      HC   +GT +K
Sbjct: 1546 CECYKNDGASGQVWVLYYPKVA----IKEKYHSNKWRRLKASF------HCYL-NGTPVK 1594

Query: 402  VKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCDDYDE 461
            V++CG    Y+ + + +   TK     +  NL +       S +     N    CDD   
Sbjct: 1595 VEKCGMQLIYV-DNDVYSRPTKIQHSDSQENLGDQR-----STVEDVNVNDRRSCDDAQN 1648

Query: 462  EPQ 464
              Q
Sbjct: 1649 TTQ 1651



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 149/314 (47%), Gaps = 35/314 (11%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC NL  LP +I  L+ LKTL   GC    +  E +G +E L +LD+  TAI   P
Sbjct: 669 LTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRSFPEIMGDMEKLRKLDLDNTAIVKLP 728

Query: 90  SSIFLMKNLKTLSFRGCNG----PPS----SASCYLPFPI--NLMRRSSDLGAL------ 133
           SSI  +K L+ L    C      P S    ++  +L F     L +   DL +L      
Sbjct: 729 SSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLKSLKCLQKL 788

Query: 134 -------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                   LPS+SGL SL  L+LS+C L +G IPS++  L SLK L LS N+F ++PASI
Sbjct: 789 YLQDLNCQLPSVSGLCSLKVLNLSECNLMDGEIPSEVCQLSSLKELDLSWNHFSSIPASI 848

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
           + L  L+ L L  C+ L  +P+LP  ++ +  +  +       +  L  S     DFV  
Sbjct: 849 SQLSKLKALGLSHCRNLLQIPELPSTLQFLDAHN-SHFTLSSPSSFLPSSFSEFQDFVCG 907

Query: 247 LKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPG-SEIPKWFMYQNEGSSITVTRPSYLC 305
                   L +     + E         SI  PG S IP+W M +N G+ +T+  P    
Sbjct: 908 SSF----QLCVCYSYSYFE------EGVSIFFPGISGIPEWIMGENMGNHVTIDLPQDWF 957

Query: 306 NMNQVVGYAACRVF 319
                +G+A C  +
Sbjct: 958 EDKDFLGFALCSAY 971



 Score = 41.6 bits (96), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 87/234 (37%), Gaps = 75/234 (32%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL L  ++IK++    EL   L  + L   K+L ++P N + + +L+ L L GC  
Sbjct: 619 ENLVELNLRCSNIKQL-WETELFKKLKVINLSHSKHLNKIP-NPSCVPNLEILTLEGCIN 676

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            E+L                       P SI+ ++ LKTL   GC    S          
Sbjct: 677 LESL-----------------------PRSIYKLRRLKTLCCGGCKNLRS---------- 703

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                                                 P  +G++  L+ L L     V 
Sbjct: 704 -------------------------------------FPEIMGDMEKLRKLDLDNTAIVK 726

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLLGALK 232
           LP+SI  L  LE L L +CK L ++PQ   N+  ++    + C+ L  L   LK
Sbjct: 727 LPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLK 780


>gi|105923235|gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 165/343 (48%), Gaps = 22/343 (6%)

Query: 3    CLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            CL  ++L+  T + E+  SI  L  L  L L+GCK+L  LP +I  LK L++LN+  C  
Sbjct: 734  CLERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCKSLKNLPESICYLKCLESLNISRCIN 793

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             E L + +G +E+L  L   GTAI   PSSI  +KNL  LS  G     SS S +     
Sbjct: 794  LEKLPDQLGDMEALTMLLADGTAIERLPSSIGHLKNLSNLSLGGFKYDLSSVSWFSHILP 853

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
             L  R S+  AL LP+ +GL SL +LDLS CGL +G   +D+G L SL+ L  ++N    
Sbjct: 854  WLSPRISNPRAL-LPTFTGLNSLRRLDLSYCGLSDG---TDLGGLSSLQELNFTRNKLNN 909

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK----LRKSS 237
            LP  I+ L  L+ L L  C  L S+  LP  +  + V  C S+  L    K    +   +
Sbjct: 910  LPNGIDRLPELQVLCLYHCADLLSISDLPSTLHSLMVYHCTSIERLSIHSKNVPDMYLVN 969

Query: 238  CTIIDFVDSLKLLGKNGLAI-----SMLREFLEVVSA--PSHKFSIVVPGSEIPKWFMYQ 290
            C  +  +  L  +G   L        +   F  ++ A        I +  SEIP WF ++
Sbjct: 970  CQQLSDIQGLGSVGNKPLIYVDNCSKLANNFKSLLQASFKGEHLDICLRDSEIPDWFSHR 1029

Query: 291  NEGSSITVTRPSYLCNMNQVVGYAAC----RVFHVPKHSTGIR 329
             +GSSI+   P     +  ++ +  C    R   +P  S  IR
Sbjct: 1030 GDGSSISFYVPD--SEIQGLIVWIVCGASERRLPLPYASATIR 1070


>gi|359493225|ref|XP_002264620.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1448

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 221/507 (43%), Gaps = 103/507 (20%)

Query: 3    CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            C +    + +D+KE+P+ IE    L  L L+GCK L  LPS+I   KSL TL   GC + 
Sbjct: 977  CRQRGCFEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQL 1035

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS------- 111
            E+  E +  +E L++LD+ G+AI+  PSSI  ++ L+ L+   C    N P S       
Sbjct: 1036 ESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSL 1095

Query: 112  ----SASC--YLPFPINLMRRSS-------DLGAL--MLPSLSGLGSLTKLDLSDCGLGE 156
                  SC      P NL R  S       D  ++   LPSLSGL SL  L L +CGL E
Sbjct: 1096 KTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINCGLRE 1155

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
              IPS I +L SL+ L L  N F + P  I+ L  L  L L  CK LQ +P+ P N+  +
Sbjct: 1156 --IPSGICHLTSLQCLVLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITL 1213

Query: 217  RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
              + C SL      L        I  FV  +KLL                        + 
Sbjct: 1214 VAHQCTSLKISSSLLWSPFFKSGIQKFVPGVKLLD-----------------------TF 1250

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---------KHSTG 327
            +   + IP+W  +Q +GS IT+T P      +  +G+A C + HVP         +    
Sbjct: 1251 IPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNF 1309

Query: 328  IRRFYRYPHPAHVL-------HCSM----DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE 376
            I +     +P+ V+       HC +    DE      S+ LWL+ + + S   N+   + 
Sbjct: 1310 ICKLNFNNNPSLVVRDIQSRRHCQICRDGDE------SNQLWLIKIAK-SMIPNI---YH 1359

Query: 377  SNHFRL---SFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNL 433
            SN +R    SF ++ +          +KV+RCGF   Y  +  +   T  Q +  +    
Sbjct: 1360 SNKYRTLNASFKNDFDT-------KSVKVERCGFQLLYAQDCGQNHLTIVQGSSSS---- 1408

Query: 434  NEFHHDFVGSNMAVAKANGSGCCDDYD 460
               H D  G   AV   N    CD+ +
Sbjct: 1409 ---HGDLGGHRSAVQDTND---CDNQE 1429



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTLKGC  L  LP  I   K L+TL+   C K +   E  G +  L ELD+SGTAI   P
Sbjct: 669 LTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELP 728

Query: 90  SSIFL--MKNLKTLSFRGCN 107
           SS     +K LK LSFRGC+
Sbjct: 729 SSSSFGHLKALKILSFRGCS 748


>gi|408537062|gb|AFU75184.1| nematode resistance-like protein, partial [Solanum boliviense]
          Length = 307

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 137/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+  S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +NL + +G +  LEEL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 131 NLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSLSGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKAIYANECTSLMSI 290



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 24/238 (10%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R +L + T + E+  SIE L  LV L LK C+NL  LP  I  L+ L+ L L GC K   
Sbjct: 5   RLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRT 63

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E   ++  L EL +  TA+    +S+  +  +  ++   C    S        P ++ 
Sbjct: 64  FPEIEEKMNCLAELYLGATALSELSASVENLSGVGVINLSYCKHLES-------LPSSIF 116

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           R               L  L  LD+S C      +P D+G L  L+ L+ +     T+P+
Sbjct: 117 R---------------LKCLKTLDVSGCS-NLKNLPDDLGLLVGLEELHCTHTAIQTIPS 160

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
           S++ L NL++L L  C  L S      + +K       +L  L   + L  S C I D
Sbjct: 161 SMSLLKNLKRLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISD 218


>gi|317415948|emb|CAR94514.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2048

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNI-NSLKSLKTLNLLGC 59
            M+ LR+L LD T I+E+P SI+ L+GL+ L L+ CKNL+ LP  I  SL SL+ LN+ GC
Sbjct: 708  MKQLRKLHLDGTAIEELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGC 767

Query: 60   FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
                 L E +G +E L+EL  S TAI+  P+SI  + +L  L+ R C             
Sbjct: 768  SNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECK------------ 815

Query: 120  PINLMRRSSDLGALMLPSL--SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              NL         L LP +  + L SL  L+LS C      +P ++G+L  L+ LY S  
Sbjct: 816  --NL---------LTLPDVICTNLTSLQILNLSGCS-NLNELPENLGSLECLQELYASGT 863

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA----LKL 233
                +P SI+ L  L +L L+ C +LQSLP+LP ++  V V+ C     L GA    + +
Sbjct: 864  AISQIPESISQLSQLGELVLDGCSKLQSLPRLPFSIRAVSVHNCP---LLQGAHSNKITV 920

Query: 234  RKSSCTIIDFVDSLK--------LLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
              S+     F++  +         L    L     + F E       +F      +EIP 
Sbjct: 921  WPSAAAGFSFLNRQRHDDIAQAFWLPDKHLLWPFYQTFFEDAIRRDERFEYGYRSNEIPA 980

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            W   ++  S+IT+  P  +   ++ +  A C +
Sbjct: 981  WLSRRSTESTITIPLPHDVDGKSKWIKLALCFI 1013



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 69/168 (41%), Gaps = 33/168 (19%)

Query: 273  KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
            K++   P +EI +WF +Q+ G S+ +  PS LC     +G A C  F V  HST I    
Sbjct: 1456 KYNSCFPPNEIVEWFGHQSSGPSVKIPLPSNLCEDTNWIGLALCAYFSVLDHST-IDLEN 1514

Query: 333  RYPHPAHVLHC------------------SMDEKFGHRGSDHLWLLYLPRQSYYCNVKWH 374
              P  +H L C                  S + K+ +R    +WL Y+PR  +   +K  
Sbjct: 1515 LNPEISHNLTCLLETDESCLESLHGYSTNSQEFKWLYRMGGFIWLSYIPRCWFSDQLK-- 1572

Query: 375  FESNHFRLSFMDEREKHCPAGSGTG-LKVKRCGFHPGYMHEVEEFDET 421
             E  H   S           GS  G L V RCG    Y+ + E   ET
Sbjct: 1573 -ERGHLEASI----------GSDHGSLGVHRCGLRLIYLEDEEGLKET 1609



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 29/163 (17%)

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPA 338
            P S   +WF +Q+  SS T++ P  L   +  +G A C  F V +H T        P  +
Sbjct: 1883 PSSITLEWFGHQSNDSSATISLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAIS 1942

Query: 339  HVLHCSMDEKFGHRGSDH-----------------LWLLYLPRQSYYCNVKWHFESNHFR 381
            H L C+++       S H                 +W+ Y+PR  +   +    E     
Sbjct: 1943 HHLICNLESDRDSLESLHDYCTTKEEFLWLHLGGFVWVSYIPRAWFSDQLN---ECGVLE 1999

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
             S   + E            V++CG    Y H+ EEF +T  +
Sbjct: 2000 ASIASDHE---------AFSVQKCGLRLVYQHDEEEFKQTISR 2033



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 57/160 (35%), Gaps = 30/160 (18%)

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPA 338
            P S   +WF  Q+ GSSI V  P +L      +G A C  F +  + T        P  +
Sbjct: 1675 PSSITLEWFGDQSSGSSIRVPLPPHLYRATNWIGLALCTSFSIVDNPTADLDNLN-PEIS 1733

Query: 339  HVLHCSMDEKFGHRGSDH-----------------LWLLYLPRQSYYCNVKWHFESNHFR 381
            H L C ++   G     H                 +W+ Y+PR  +   +    E +   
Sbjct: 1734 HHLICHLESDRGTIEPLHDYCTTNEEFQWLPFGGFIWVSYIPRAWFSDQLN---ECDVLE 1790

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
             SF  + E            V  CG    Y H+ EE  +T
Sbjct: 1791 ASFASDHE---------AFTVHECGLRLVYQHDEEEIKQT 1821


>gi|227438275|gb|ACP30627.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1226

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 165/348 (47%), Gaps = 44/348 (12%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            E +  L LD T +K +P SIE L  L  L LK C  L+ LP+ +  LKSLK L L GC K
Sbjct: 726  ENIESLYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSK 785

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             E+  +    +ESLE L +  TAI+  P  +  M NLK  SF G                
Sbjct: 786  LESFPDINEDMESLEILLMDDTAIKQTPRKMD-MSNLKLFSFGG---------------- 828

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                +  DL  L L   SG   L+ + L+DC L +  +P     L  L+TL LS+NN   
Sbjct: 829  ---SKVHDLTCLELLPFSGCSRLSDMYLTDCNLYK--LPDSFSCLSLLQTLCLSRNNIKN 883

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL----RKSS 237
            LP SI  L +L+ L L+ C++L SLP LP N++ +  +GC SL T+   + L     ++ 
Sbjct: 884  LPGSIKKLHHLKSLYLKHCQQLVSLPVLPSNLQYLDAHGCISLETVAKPMTLLVVAERNQ 943

Query: 238  CTIIDFVDSLKLLGKNGLAI--------------SMLREFLEVVSAPSHKFSIVVPGSEI 283
             T + F D  KL      +I              S+ R    +VS P    S   PG+++
Sbjct: 944  STFV-FTDCFKLNRDAQESIVAHTQLKSQILGNGSLQRNHKGLVSEPLASASF--PGNDL 1000

Query: 284  PKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
            P WF +Q  GSS+    P + C+ ++ +G + C V     +     RF
Sbjct: 1001 PLWFRHQRMGSSMETHLPPHWCD-DKFIGLSLCVVVSFKDYVDKTNRF 1047


>gi|51477388|gb|AAU04761.1| MRGH13 [Cucumis melo]
          Length = 1024

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/247 (41%), Positives = 141/247 (57%), Gaps = 7/247 (2%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L++T IK +  SI  L+ LV L LK C NL++LPS I SL SLKTLNL GC 
Sbjct: 739 MNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCS 798

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + ++L E++G + SLE+LDI+ T +   P S  L+  L+ L+ +G     S    +  FP
Sbjct: 799 ELDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGL----SRKFLHSLFP 854

Query: 121 I-NLMRRSSDLG-ALMLPSLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
             N  R+ +     L + +    G SL  L+LSDC L +G +P+D+ +L SL+ L+LSKN
Sbjct: 855 TWNFTRKFTIYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSKN 914

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
           +F  LP SI  L NL  L L +C  L SLP+LP +V +V    C SL       K   SS
Sbjct: 915 HFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVREVDAKDCVSLKEYYNKEKQIPSS 974

Query: 238 CTIIDFV 244
              I F+
Sbjct: 975 EMGITFI 981



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 68/331 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L+ + L  +          ++  L +L L GC  L +L  ++ +LK L  L+L  C 
Sbjct: 645 METLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDLRNCK 704

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  N+                       P +I L ++LK L   GC       S    FP
Sbjct: 705 KLTNI-----------------------PFNICL-ESLKILVLSGC-------SSLTHFP 733

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
               + SS++  L+           +L L +  +    + S IG+L SL  L L    N 
Sbjct: 734 ----KISSNMNYLL-----------ELHLEETSI--KVLHSSIGHLTSLVVLNLKNCTNL 776

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
           + LP++I  L +L+ L L  C  L SLP+   N+  +      S       +  +     
Sbjct: 777 LKLPSTIGSLTSLKTLNLNGCSELDSLPESLGNISSLEKLDITSTCVNQAPMSFQ----- 831

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
               +  L++L   GL+   L       +  + KF+I   G ++  WF +   G S+ + 
Sbjct: 832 ---LLTKLEILNCQGLSRKFLHSLFPTWNF-TRKFTIYSQGLKVTNWFTF---GCSLRIL 884

Query: 300 RPSYLCNM------NQVVGYAACRVFHVPKH 324
             S  CN+      N +   A+ ++ H+ K+
Sbjct: 885 NLSD-CNLWDGDLPNDLRSLASLQILHLSKN 914


>gi|163914239|dbj|BAF95889.1| N-like protein [Nicotiana tabacum]
          Length = 1169

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 154/318 (48%), Gaps = 32/318 (10%)

Query: 11   KTDIKEMPLS-IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
            ++ I+E+P S     + +  L L   +NLV  PS+I  L SL  L + GC K E+L E +
Sbjct: 730  RSGIRELPSSSFHYQTRITWLDLSDMENLVVFPSSICRLISLVQLFVSGCSKLESLPEEI 789

Query: 70   GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
            G +++LE L  S T I  PPSSI  +  L +LSFR C+G       +  FP         
Sbjct: 790  GDLDNLEVLYASDTLISRPPSSIVRLNKLNSLSFR-CSG---DNGVHFEFP--------- 836

Query: 130  LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
                  P   GL SL  LDLS C L +G +P DIG+L SLK L L  NNF  LP SI  L
Sbjct: 837  ------PVAEGLLSLKNLDLSYCNLIDGGLPEDIGSLSSLKELDLRGNNFEHLPRSIAQL 890

Query: 190  FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF------ 243
              L  L L  C+ L  LP+L   + ++ V+ C   +  +  L  ++     + F      
Sbjct: 891  GALRSLGLSFCQTLIQLPELSHELNELHVD-CHMALKFINDLVTKRKKLQRVVFPPLYDD 949

Query: 244  --VDSLKLLGKNGL--AISMLREFLEVV-SAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
               DS+  L  + L   IS LR  + V  S   + F+I     +IP WF ++   SS++V
Sbjct: 950  AHNDSIYNLFAHALFQNISSLRHDISVSDSLFENVFTIWHYWKKIPSWFHHKGTDSSVSV 1009

Query: 299  TRPSYLCNMNQVVGYAAC 316
              P      ++ +G+A C
Sbjct: 1010 DLPENWYIPDKFLGFAVC 1027


>gi|147821213|emb|CAN66451.1| hypothetical protein VITISV_004611 [Vitis vinifera]
          Length = 616

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 172/345 (49%), Gaps = 38/345 (11%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L QL L+GC +L  +  ++  L  LK L+L  C   ++L   +  ++SLE  D+SG    
Sbjct: 206 LEQLVLEGCISLREVHPSLVVLNKLKFLSLKNCIMLKSLPSNIYNLKSLETFDVSGC--- 262

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
              S    +K LK L      G PS++        +LM RSS+    MLP    L SLTK
Sbjct: 263 ---SDCVNLKWLKEL--YADKGTPSAS--------HLMPRSSNSICFMLPPFPVLCSLTK 309

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           L+L++C + +GA   ++G L SLK+L LS N FVTLP+SIN L  L+ L LE+CKRL++L
Sbjct: 310 LNLTNCFISDGANLGNLGFLSSLKSLNLSGNLFVTLPSSINQLSQLKWLGLENCKRLKTL 369

Query: 207 PQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEV 266
            +LP ++E++  + C SL TL    KL+          D L L      +  +     E+
Sbjct: 370 RELPSSIEEINAHNCTSLTTLSSGFKLKG---------DPL-LPPLEPASPELETSIPEL 419

Query: 267 VSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---- 322
           + A    FS+V+PG  IP W   Q+  S I +  P    N N V+ +A   V++ P    
Sbjct: 420 LKA---AFSLVIPGRRIPDWIRNQDCSSKIELELPPSWFNSN-VLAFAFAVVYNFPLPLS 475

Query: 323 KHSTGIR----RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLP 363
             S+G       FY +    H          G   SDHLWLL +P
Sbjct: 476 HRSSGWVSADCNFYSHHSSWHYAVYPQTTLRGGLESDHLWLLCVP 520


>gi|225460105|ref|XP_002275120.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1915

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 168/335 (50%), Gaps = 32/335 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +E LREL L+ T I+E+P SI+ L GL  L L  C NLV LP  I  LKSL  L+  GC 
Sbjct: 1384 LENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGCS 1443

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCY 116
            + ++  E +  +E+L EL + GTAI+  P+SI  +  L+ L    C    N P S   C 
Sbjct: 1444 QLKSFPEILENIENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPES--ICN 1501

Query: 117  LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL-----SDCGLGEGAIPSDIGNLHSLKT 171
            L F  NL   + +L + +      LGSL +L+L     SD     GAI SD   + S K 
Sbjct: 1502 LRFLKNL---NVNLCSKLEKFPQNLGSLQRLELLGAAGSDSNRVLGAIQSDDCRMSSWKA 1558

Query: 172  LYLSKNNFVTLPASINC-LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA 230
            L LS N F ++       L  L  L L  C++L  +P+LPP++  + V+ C  L TL   
Sbjct: 1559 LNLSINYFSSIIPISIIQLSKLRVLDLSHCQKLLQIPELPPSLRILDVHACPCLETL--- 1615

Query: 231  LKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMY 289
                 S  +++ F  SL    K     S + EF E  S  S +  IV+PG+  IP+W   
Sbjct: 1616 ----SSPSSLLGF--SLFRCFK-----SAIEEF-ECGSYWSKEIQIVIPGNNGIPEWISQ 1663

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKH 324
            + +GS IT+  P    + N  +G A   V+ VP H
Sbjct: 1664 RKKGSEITIELPMDWYHNNDFLGVALYSVY-VPLH 1697



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LRE+ L  T I E+P SIE L+GL    L GC NLV LP +I +L SL+TL L  C 
Sbjct: 667 MSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSLQTLYLDSCS 726

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC-NGPPSSASCYLPF 119
           K +   E    + +LE L++  TAI    SS+  +K LK L    C N      S +   
Sbjct: 727 KLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVNLPESIFNIS 786

Query: 120 PINLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-N 177
            +  +  S  L     P + + +G+L +LDLS   + E  +P  IG L +LK L LS  +
Sbjct: 787 SLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTAIEE--LPYSIGYLKALKDLDLSYCH 844

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           N V LP SI  L +LEKL++ +C +LQ L
Sbjct: 845 NLVNLPESICNLSSLEKLRVRNCPKLQRL 873



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 200/518 (38%), Gaps = 128/518 (24%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSL--------- 51
            M  L  L L  T I+E+P SI  L  L  L L  C NLV LP +I +L SL         
Sbjct: 809  MGNLERLDLSFTAIEELPYSIGYLKALKDLDLSYCHNLVNLPESICNLSSLEKLRVRNCP 868

Query: 52   ----------------KTLNLLGCFKFENLLETVGQVESLEEL----------------- 78
                            ++LN   C   + ++ + G+  SLE L                 
Sbjct: 869  KLQRLEVNLEDGSHILRSLNTTCCIIKQGVIWSNGRFSSLETLHLRCSQMEGEILNHHIW 928

Query: 79   -------------DISGTAIRCP---PSSIFLMK----NLKTLSFRG-CNGPPSSASCY- 116
                         D++G  I      PSS+  +     NL  +  +G  N  P S     
Sbjct: 929  SLSSLVELCIRNSDLTGRGILSDSFYPSSLVGLSVGNFNLMEVGDKGESNDSPLSVGIQG 988

Query: 117  -------LPFPINLMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
                   L   + L   + +L  + +L  +  L SL KL L++C L EG I + I +L S
Sbjct: 989  ILNDIWNLSSLVKLSLNNCNLMEVGILSDIWNLSSLVKLSLNNCNLKEGEILNRICHLPS 1048

Query: 169  LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL- 227
            L+ L L  N+F ++PA I  L NL  L L  CK+LQ +P+LP ++  + ++ C  L  + 
Sbjct: 1049 LEELSLDGNHFSSIPAGIRLLSNLRALNLRHCKKLQEIPELPSSLRDLYLSHCKKLRAIP 1108

Query: 228  ---LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK---FSIVVPGS 281
                  L L   S   I  + +  LL  N L   + +E    + A   +     IV+P S
Sbjct: 1109 ELPSNLLLLDMHSSDGISSLSNHSLL--NCLKSKLYQELQISLGASEFRDMAMEIVIPRS 1166

Query: 282  E-IPKWFMYQNEGS-SITVTRPSYLCNMNQVVGYAACRVF-HVPK--------------- 323
              I +    Q+ GS  + +  P      N ++G+A C V+  VP                
Sbjct: 1167 SGILEGTRNQSMGSHQVRIELPQNWYENNDLLGFALCCVYVWVPDEFNPRCEPLSCLDCK 1226

Query: 324  -------HSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSY---YCNVKW 373
                    S  + +F          HCS D+      SD +W++Y P+ +    Y + +W
Sbjct: 1227 LAISGNCQSKDVDKF----QIESECHCSDDDDDHGSASDLVWVIYYPKDAIKKQYLSNQW 1282

Query: 374  HFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGY 411
                 HF  SF               L+ K CG HP Y
Sbjct: 1283 ----THFTASF-----------KSVTLEAKECGIHPIY 1305



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 24/222 (10%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL L ++ IK++    E+ + L  + L   K LV +P + +S+ +L+ LNL GC   E
Sbjct: 600 LVELDLVRSGIKKLWKGDEIFNSLKVINLGYSKYLVEIP-DFSSVPNLEILNLEGCTSLE 658

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-N 122
           +  +    +  L E+++SGTAI   PSSI  +  L+  +  GC    S     LP  I N
Sbjct: 659 SFPKIKENMSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVS-----LPRSICN 713

Query: 123 LMRRSSDLGALMLPSLSGL----------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
           L    S L  L L S S L          G+L +L+L    + E  + S +G+L +LK L
Sbjct: 714 L----SSLQTLYLDSCSKLKGFPEMKDNMGNLERLNLRFTAIEE--LSSSVGHLKALKHL 767

Query: 173 YLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
            LS   N V LP SI  + +LE L    C +++  P++  N+
Sbjct: 768 DLSFCKNLVNLPESIFNISSLETLNGSMCLKIKDFPEIKNNM 809


>gi|255579570|ref|XP_002530627.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223529837|gb|EEF31770.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1116

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 210/491 (42%), Gaps = 98/491 (19%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            LR L  D+   K  P + +  + L++L ++ C N+  +   I  LK LK ++L       
Sbjct: 577  LRYLEWDRYPFKSFPSTFQP-NELIELHMR-CSNIKHMWKGIKPLKMLKVIDLSYSV--- 631

Query: 64   NLLETVG--QVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            NL++T+    V +LEEL++ G T +     SI +++  +          PS+       P
Sbjct: 632  NLIKTMDFKDVPNLEELNLEGCTRLLEVHQSIGVLREWEI----APRQLPSTKLWDFLLP 687

Query: 121  IN------LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                    L +++ +  A+ LP+L  L SL  L+LS C L +GA+PSD+     LKT  L
Sbjct: 688  WQKFPQRFLTQKNPNPMAMALPALFSLKSLRSLNLSYCNLTDGALPSDLSCFPLLKTFNL 747

Query: 175  SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL------ 228
            S NNFV++P+SI+ L  LE  +  +CKRLQS P LP ++  + + GC++L TLL      
Sbjct: 748  SGNNFVSIPSSISRLSKLEDFQFSNCKRLQSFPNLPSSILFLSMEGCSALETLLPKSNSS 807

Query: 229  -----------------------GALKL--------------------RKSSCTIIDFVD 245
                                     LK+                    + S  T I+ + 
Sbjct: 808  QFELFNICAEGCKRLQLLPDLSSSILKISVEGFSSKETSPNLFVTHSSKPSMLTFINILK 867

Query: 246  SLKLLGKNGLAISMLREFLEVVSA----------PSHKFSIVVPGSEIPKWFMYQNEGSS 295
            S+++  +N   ++ +  +L  +            PS + S+ + GSEIP WF YQ+ GSS
Sbjct: 868  SVEVQSENIPLVARMSGYLHYLLRHRHSSLGFFNPSTQVSVCLAGSEIPGWFNYQSPGSS 927

Query: 296  ITVTRPSYLCNMNQVVGYAACRVFH----VPKHSTGIRRFYRYPHPAHVLHCSMD----E 347
            + +  P Y    N+ +G+  C VF     +   ST     +    P   L          
Sbjct: 928  LEMQLPPYWWT-NKWMGFTFCIVFEFREPIADTSTIFCDLHARIAPDQDLFLGRSSVQIS 986

Query: 348  KFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
            K      D LW+ Y+PR    C  KW  ES+  +++F               L  K CG 
Sbjct: 987  KELDTTLDQLWVNYIPRSCLTCLDKWE-ESDCLKMTFF-----------SNELSFKYCGI 1034

Query: 408  HPGYMHEVEEF 418
               Y  + +E 
Sbjct: 1035 RKMYSRDADEL 1045


>gi|147865361|emb|CAN84090.1| hypothetical protein VITISV_003077 [Vitis vinifera]
          Length = 1002

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/154 (50%), Positives = 95/154 (61%), Gaps = 8/154 (5%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L+LK CK L RLPS I + KSL+TL L GC KFE   E  G +E L+EL   GT +R  P
Sbjct: 700 LSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALP 759

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
            S F M+NLK LSFRGC GP S++  +        +RSS+     +PS S L  L KLDL
Sbjct: 760 PSNFSMRNLKKLSFRGC-GPASASWLW-------XKRSSNSICFTVPSSSNLCYLKKLDL 811

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           SDC + +GA    +G L SL+ L LS NNFVTLP
Sbjct: 812 SDCNISDGANLGSLGFLSSLEDLNLSGNNFVTLP 845



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 145/396 (36%), Gaps = 85/396 (21%)

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           + L + +  ++SL+ +D+S +           + NL+ L   GC   P            
Sbjct: 638 KKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNLERLVLEGCINLPE----------- 686

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
                      + PSL  L  L  L L DC +    +PS I N  SL+TL LS  + F  
Sbjct: 687 -----------VHPSLGDLKKLNFLSLKDCKMLR-RLPSRIWNFKSLRTLILSGCSKFEE 734

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPN-----VEKVRVNGCA-------------- 222
            P +   L  L++L  ED   +++LP  P N     ++K+   GC               
Sbjct: 735 FPENFGNLEMLKELH-EDGTVVRALP--PSNFSMRNLKKLSFRGCGPASASWLWXKRSSN 791

Query: 223 -------SLVTLLGALKLRKSSCTIID--------FVDSLKLLGKNGLAISMLREFLEVV 267
                  S   L    KL  S C I D        F+ SL+ L  +G     L   +  +
Sbjct: 792 SICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSSLEDLNLSGNNFVTLPN-MSGL 850

Query: 268 SAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---KH 324
           S      + V+PGS IP W  YQ+  + I    P  L      +G+A   VF       H
Sbjct: 851 SHLDSDVAFVIPGSRIPDWIRYQSSENVIEADLP--LNWSTNCLGFALALVFSSQPPVSH 908

Query: 325 STGIRRFYRYP------HPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESN 378
                 F  +             H   D        DH+ L Y+P Q    ++  H +  
Sbjct: 909 WLWAEVFLDFGTCCCSIETQCFFHLEGDNCVLAHEVDHVLLXYVPVQP---SLSPH-QVI 964

Query: 379 HFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE 414
           H + +F           S TG ++KRCG    Y++E
Sbjct: 965 HIKATF--------AITSETGYEIKRCGLGLVYVNE 992


>gi|296081088|emb|CBI18282.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 216/507 (42%), Gaps = 103/507 (20%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           C +    + +D+KE+P+ IE    L  L L+GCK L  LPS+I   KSL TL   GC + 
Sbjct: 239 CRQRGCFEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQL 297

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSA----- 113
           E+  E +  +E L++LD+ G+AI+  PSSI  ++ L+ L+   C    N P S       
Sbjct: 298 ESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSL 357

Query: 114 ------SC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGE 156
                 SC      P NL R  S         D      PSLSGL SL  L L +CGL E
Sbjct: 358 KTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINCGLRE 417

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
             IPS I +L SL+ L L  N F ++P  I+ L  L  L L  CK LQ +P+ P N+  +
Sbjct: 418 --IPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTL 475

Query: 217 RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
             + C SL      L        I  FV   K+L                        + 
Sbjct: 476 VAHQCTSLKISSSLLWSPFFKSGIQKFVPRGKVLD-----------------------TF 512

Query: 277 VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---------KHSTG 327
           +   + IP+W  +Q +GS IT+T P      +  +G+A C + HVP         +    
Sbjct: 513 IPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNF 571

Query: 328 IRRFYRYPHPAHVL-------HCSM----DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE 376
           I +     +P+ V+       HC      DE      S+ LWL+ + + S   N+   + 
Sbjct: 572 ICKLNFNNNPSLVVRDIQSRRHCQSCRDGDE------SNQLWLIKIAK-SMIPNI---YH 621

Query: 377 SNHFRL---SFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNL 433
           SN +R    SF ++ +          +KV+RCGF   Y  +      T  Q +  +    
Sbjct: 622 SNKYRTLNASFKNDFDT-------KSVKVERCGFQLLYAQDYGHNHLTIVQGSSSS---- 670

Query: 434 NEFHHDFVGSNMAVAKANGSGCCDDYD 460
              H D  G   AV   N    CD+ +
Sbjct: 671 ---HGDLGGHRSAVQDTND---CDNQE 691


>gi|359495250|ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 195/475 (41%), Gaps = 98/475 (20%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  LR L L  T IK +P SI   +GL  LTL+ C+NL  LP +I  LKSLK L ++GC 
Sbjct: 964  MGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLP-DICGLKSLKGLFIIGCS 1022

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
              E   E    +E L+ L +  T I   PSSI  ++ L +L    C      P S     
Sbjct: 1023 NLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNLVALPISIGSLT 1082

Query: 118  PFPINLMRRSSDLGALMLPSLSGLGS-LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
               I  +R  + L  L   +L GL   L KLDL  C L EG IPSD+  L SL++LY+S+
Sbjct: 1083 CLTILRVRNCTKLHNLP-DNLRGLRRRLIKLDLGGCNLMEGEIPSDLWCLSSLESLYVSE 1141

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
            N+   +PA I  LF L+ L +  C  L+ + +LP ++  +   GC  L T   +      
Sbjct: 1142 NHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYMEARGCPCLETETFS------ 1195

Query: 237  SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAP---SHKFSIVVPGSE-IPKWFMYQNE 292
                            + L  S+L+ F   + +      +F  V+PGS  IP+W  +Q  
Sbjct: 1196 ----------------SPLWSSLLKYFKSAIQSTFFGPRRF--VIPGSSGIPEWVSHQRI 1237

Query: 293  GSSITVTRPSYLCNMNQVVGYAACRVFHVP-----------------------KHSTGIR 329
            G  + +  P      N  +G+      HVP                         S  + 
Sbjct: 1238 GCEVRIELPMNWYEDNNFLGFVLF-FHHVPLDNDECETTEGSTAHCELTISHGDQSERLN 1296

Query: 330  RFYRYPHP--------AHVLHCS-----------MDEKFGHRGSD-HLWLLYLPR---QS 366
              + YP          ++V   S            D  +    SD  +W+ Y P+   + 
Sbjct: 1297 NIWFYPESKTCYSYDLSYVFDISNDFDSLNEDNCFDVHYSGSTSDPAIWVTYFPQIKIRG 1356

Query: 367  YYCNVKWHFESNHFRLSFMDEREKHCPAGSGT-------GLKVKRCGFHPGYMHE 414
             Y +  W    N+F+  F      H P GSG+         KVK CG H  Y  +
Sbjct: 1357 TYRSSWW----NNFKARF------HTPIGSGSFKCGDNACFKVKSCGIHLLYAQD 1401



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 27/243 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK----------NLVR---------- 40
           M+CL+ L LD+T IKE+P SI  L+ L  L+L+ C           N+ R          
Sbjct: 729 MKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESG 788

Query: 41  ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
              LP +I  L+ L  L+L  C KFE   E  G ++ L+ L +  TAI+  P+SI  + +
Sbjct: 789 IKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTS 848

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
           L+ LS R C+     +  +       +    + G   LP S+  L SL +LDLS+C   E
Sbjct: 849 LEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFE 908

Query: 157 GAIPSDIG-NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
               S+I  N+  L+ LYL       LP SI CL +LE L L+ C  L+ LP++  ++  
Sbjct: 909 KF--SEIQWNMKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLERLPEIQKDMGN 966

Query: 216 VRV 218
           +R 
Sbjct: 967 LRA 969



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 3/206 (1%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K++P  +  +  L +L L G   +  LP +I  L+SL+ L+L  C KFE   E  G ++
Sbjct: 672 LKKIPKILGNMGHLKKLCLNG-SGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNMK 730

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L+ L +  TAI+  P+SI  + +L+ LS R C+     +  +      L+    + G  
Sbjct: 731 CLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESGIK 790

Query: 134 MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP S+  L  L +LDLS C   E   P   GN+  LK L L +     LP SI  + +L
Sbjct: 791 ELPGSIGCLEFLLQLDLSYCSKFE-KFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTSL 849

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRV 218
           E L L  C + +    +  N+  +++
Sbjct: 850 EILSLRKCSKFEKFSDVFTNMRHLQI 875



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 41/226 (18%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------FKFENLL-------- 66
           +  L +L L+GC +L  L S+I  LK L  LNL GC          KFE+L         
Sbjct: 611 MPNLERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCR 670

Query: 67  ------ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                 + +G +  L++L ++G+ I+  P SI  +++L+ L    C       S +  FP
Sbjct: 671 KLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNC-------SKFEKFP 723

Query: 121 ------INLMRRSSDLGALM-LP-SLSGLGSLTKLDLSDCGLGEGAIPSDI-GNLHSLKT 171
                   L R S D  A+  LP S+  L SL  L L  C   E    SD+  N+  L  
Sbjct: 724 EIRGNMKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKF--SDVFTNMRRLLI 781

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           L L ++    LP SI CL  L +L L  C + +  P++  N+++++
Sbjct: 782 LNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLK 827



 Score = 41.6 bits (96), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME ++ + LD +  KE+  S E+ +            L  LPS+    + L  +NL    
Sbjct: 531 MENIQTISLDLSRSKEIQFSTEVCT------------LRSLPSSFCG-EQLIEINLKSS- 576

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             + L +   ++E L+ +D+S +           M NL+ L+  GC     ++ C L   
Sbjct: 577 NIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGC-----TSLCELHSS 631

Query: 121 INLMRRSSDL---GALML---PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  +++ + L   G   L   P+     SL  L L+ C   +  IP  +GN+  LK L L
Sbjct: 632 IGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCRKLK-KIPKILGNMGHLKKLCL 690

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           + +    LP SI  L +LE L L +C + +  P++  N++
Sbjct: 691 NGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNMK 730


>gi|449482311|ref|XP_004156244.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1676

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 201/474 (42%), Gaps = 95/474 (20%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L D T +  +  SI     L+ L+LK C NL  LPS+IN +K L+ L L GC K + + E
Sbjct: 1201 LEDCTSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHIN-IKVLEVLILSGCSKVKKVPE 1259

Query: 68   TVGQVESLEELDISGTAIRCPPSSI-----------------------FLMKNLKTLSFR 104
              G    L +L + GT+I   PSSI                         M +L++L   
Sbjct: 1260 FSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAIEMTSLQSLDVS 1319

Query: 105  GCN--GPPSSASCYLPF-PINLM-----RRSSD-----------------LGALMLPSLS 139
            GC+  G        +    +N+      RR+ D                  G   +PSL+
Sbjct: 1320 GCSKLGSRKGKGDNVELGEVNVRETTRRRRNDDCNNIFKEIFLWLCNTPATGIFGIPSLA 1379

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            GL SLTKL+L DC L    IP  I  + SL  L LS NNF  LP SI+ L NL++L++  
Sbjct: 1380 GLYSLTKLNLKDCNLE--VIPQGIECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQ 1437

Query: 200  CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK----NGL 255
            CK+L   P+LPP +  +    C SL   +   K           VD+L ++ +    N  
Sbjct: 1438 CKKLVHFPKLPPRILFLTSKDCISLKDFIDISK-----------VDNLYIMKEVNLLNCY 1486

Query: 256  AISMLREFLEVVSAPSHK-------FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMN 308
             ++  ++F  ++ +   K       F+I++PGSEIP WF  +  GSS+ +       N N
Sbjct: 1487 QMANNKDFHRLIISSMQKMFFRKGTFNIMIPGSEIPDWFTTRKMGSSVCMEWDPDAPNTN 1546

Query: 309  QVVGYAACRV--------------FHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGS 354
             ++ +A C V              F +    TG  R          L        G +  
Sbjct: 1547 -MIRFALCVVIGLSDKSDVCNVSSFTIIASVTGKDRNDTNLKNGDDLLVDAFLVSGMKKL 1605

Query: 355  DHLWLLYLPRQSYYCNVKWHFESNHFR--LSFMDEREKHCPAGSGTGLKVKRCG 406
            DH+W+  LPR         +++   FR  L   + R+   P      ++VK+CG
Sbjct: 1606 DHIWMFVLPRTGTLLRKISNYKEIKFRFLLQAANYRQSITP-----NVEVKKCG 1654


>gi|225460157|ref|XP_002276248.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1253

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 224/476 (47%), Gaps = 71/476 (14%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L     ++++  SI +L+ L  L L+ CK L  L  +I  L SL+TL + GC K 
Sbjct: 652  LEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKL 711

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +   E +G++E L+EL    TA+   PSS+  +KNL+T SF+G  GP        P P +
Sbjct: 712  KKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRKGPS-------PAPSS 764

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
            ++R  SD    +LP +SGL SL KL+LSD  + +GA  SD+G L SLK L L+ NNF TL
Sbjct: 765  MLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGARLSDLGLLSSLKILILNGNNFDTL 824

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
            P  I+ LF L  L+ ++C+RLQ+LP+LP ++  +  + C SL                 +
Sbjct: 825  PGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSL-----------------E 867

Query: 243  FVDSLKLLGKNGLAISMLREFLEVVSAPSHK--------FSIVVPGSEIPKWFMYQNEGS 294
             V +  L   + L I+ L+E     S   H         F++V PGS IP W  YQ+ G 
Sbjct: 868  AVSNQSLF--SSLMIAKLKEHPRRTSQLEHDSEGQLSAAFTVVAPGSGIPDWISYQSSGR 925

Query: 295  SITVTRPSYLCNMNQVVGYAACRVFH---------VPKHSTGIRRFYRYPHPAHVLHCSM 345
             +TV  P         + +A+C V           + +  T    FY         +   
Sbjct: 926  EVTVKLPPNWFT-TYFLAFASCVVTSPSVLPYADSINELCTKCTVFYSTSSCVSSSYDVF 984

Query: 346  DEKF--GHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
                  G   SDH+WL Y+    +  ++  H E  H + SF            GT   +K
Sbjct: 985  PRSHAEGRMESDHVWLRYV---RFPISINCH-EVTHIKFSF--------EMILGTSSAIK 1032

Query: 404  RCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAV--AKANGSGCCD 457
            RCG    Y ++ E ++             + +F+  F   N+ +   + +GSGC +
Sbjct: 1033 RCGVGLVYGNDDENYNNP----------GMIQFNSIFSPPNLEIHDGEPSGSGCSN 1078


>gi|297741031|emb|CBI31343.3| unnamed protein product [Vitis vinifera]
          Length = 1239

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 224/476 (47%), Gaps = 71/476 (14%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L +L+L     ++++  SI +L+ L  L L+ CK L  L  +I  L SL+TL + GC K 
Sbjct: 652  LEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKL 711

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +   E +G++E L+EL    TA+   PSS+  +KNL+T SF+G  GP        P P +
Sbjct: 712  KKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRKGPS-------PAPSS 764

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
            ++R  SD    +LP +SGL SL KL+LSD  + +GA  SD+G L SLK L L+ NNF TL
Sbjct: 765  MLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGARLSDLGLLSSLKILILNGNNFDTL 824

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
            P  I+ LF L  L+ ++C+RLQ+LP+LP ++  +  + C SL                 +
Sbjct: 825  PGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSL-----------------E 867

Query: 243  FVDSLKLLGKNGLAISMLREFLEVVSAPSHK--------FSIVVPGSEIPKWFMYQNEGS 294
             V +  L   + L I+ L+E     S   H         F++V PGS IP W  YQ+ G 
Sbjct: 868  AVSNQSLF--SSLMIAKLKEHPRRTSQLEHDSEGQLSAAFTVVAPGSGIPDWISYQSSGR 925

Query: 295  SITVTRPSYLCNMNQVVGYAACRVFH---------VPKHSTGIRRFYRYPHPAHVLHCSM 345
             +TV  P         + +A+C V           + +  T    FY         +   
Sbjct: 926  EVTVKLPPNWFT-TYFLAFASCVVTSPSVLPYADSINELCTKCTVFYSTSSCVSSSYDVF 984

Query: 346  DEKF--GHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
                  G   SDH+WL Y+    +  ++  H E  H + SF            GT   +K
Sbjct: 985  PRSHAEGRMESDHVWLRYV---RFPISINCH-EVTHIKFSF--------EMILGTSSAIK 1032

Query: 404  RCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAV--AKANGSGCCD 457
            RCG    Y ++ E ++             + +F+  F   N+ +   + +GSGC +
Sbjct: 1033 RCGVGLVYGNDDENYNNP----------GMIQFNSIFSPPNLEIHDGEPSGSGCSN 1078


>gi|147859739|emb|CAN78885.1| hypothetical protein VITISV_037610 [Vitis vinifera]
          Length = 785

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 179/449 (39%), Gaps = 67/449 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME +  L LD T IK +P SI  L+ L  L ++ CKNL  LP+NI  LKSL+ ++L GC 
Sbjct: 322 MESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCS 381

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
           K E  LE    +E LE L +  TAI   P SI  ++ LK+L    C      P S     
Sbjct: 382 KLEAFLEIREDMEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKLVSLPDSIGNLT 441

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +R  S L  L     S    L  LDL  C L EG IP D+  L SL+ L +S N
Sbjct: 442 CLRSLFVRNCSKLHNLPDNLRSLKCCLRVLDLGGCNLMEGEIPHDLWCLSSLEYLDISDN 501

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
               +P  I+ L  L  L +  C  L+ + +LP +   +  +GC  L T           
Sbjct: 502 YIRCIPVGISQLSKLRTLLMNHCPMLEEITELPSSRTWMEAHGCPCLET----------- 550

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSI 296
                         +   ++          S    KF+IV+PGS  IP+W  +Q  G  +
Sbjct: 551 --------------ETSSSLLWSSLLKRFKSPIQWKFNIVIPGSSGIPEWVSHQRMGCEV 596

Query: 297 TVTRPSYLCNMNQVVGYAACRVFHVP-----------------------KHSTGIRR--- 330
            +  P      N ++G+      HVP                        H     +   
Sbjct: 597 KIKLPMNWYEDNNLLGFVL-FFHHVPHDDDECETTMYSTMFIPQCILTISHGDQYEQLDN 655

Query: 331 --FYRYPHPAHVLHCSMDEKFGHRG--SD-HLWLLYLPR---QSYYCNVKWHFESNHFRL 382
             FY       V   S D  +   G  SD  LW+ Y P+    S Y + KW++   HF  
Sbjct: 656 ICFYHRCKRYWVSGLSYDSMYYDNGGTSDPALWVTYFPQIAIPSKYRSRKWNYFKAHFET 715

Query: 383 SFMDEREKHCPAGSGTGLKVKRCGFHPGY 411
             MD     C  G     KVK CG H  Y
Sbjct: 716 P-MDRGSFRC--GDNASFKVKSCGIHLIY 741



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 29/231 (12%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LPS+I  L+SLK LNL  C  FE  LE  G ++ L EL +  TAI+  P++I  ++ L+ 
Sbjct: 244 LPSSIGYLESLKILNLSYCSNFEKFLEIQGSMKHLRELSLKETAIKELPNNIGRLEALEI 303

Query: 101 LSFRGCNGPPS------------------SASCYLPFPINLMRRSSDL------GALMLP 136
           LSF GC+                      +A   LP  I+ + R   L          LP
Sbjct: 304 LSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLP 363

Query: 137 -SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
            ++ GL SL  + L+ C   E  +     ++  L+ L+L +     LP SI  L  L+ L
Sbjct: 364 NNICGLKSLRGISLNGCSKLEAFLEIR-EDMEQLERLFLLETAITELPPSIEHLRGLKSL 422

Query: 196 KLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLLGALKLRKSSCTIIDF 243
           +L +C++L SLP    N+  +R   V  C+ L  L   L+  K    ++D 
Sbjct: 423 ELINCEKLVSLPDSIGNLTCLRSLFVRNCSKLHNLPDNLRSLKCCLRVLDL 473



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 105/237 (44%), Gaps = 37/237 (15%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------FKF------------ 62
           +  L +  L+GC       S+I  LK L  LNL GC          KF            
Sbjct: 156 MPNLERPNLEGCTRWCEFHSSIGDLKRLTYLNLGGCEHLQSFPISMKFESLKVLYLNGCQ 215

Query: 63  --ENLLETVGQVESL-EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             EN  E  G ++ L E+L +  + I+  PSSI  +++LK L+   C    S+   +L  
Sbjct: 216 NLENFPEIHGSMKHLKEQLRLDESRIKELPSSIGYLESLKILNLSYC----SNFEKFLEI 271

Query: 120 PINL--MRRSS--DLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
             ++  +R  S  +     LP+  G L +L  L  S C   E   P    N+ S+ +L L
Sbjct: 272 QGSMKHLRELSLKETAIKELPNNIGRLEALEILSFSGCSNFE-KFPEIQKNMESICSLSL 330

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLL 228
                  LP SI+ L  L+ L++E+CK L+ LP     ++ +R   +NGC+ L   L
Sbjct: 331 DYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCSKLEAFL 387


>gi|359493227|ref|XP_002264747.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1536

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 218/507 (42%), Gaps = 103/507 (20%)

Query: 3    CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            C +    + +D+KE+P+ IE    L  L L+GCK L  LPS+I   KSL TL   GC + 
Sbjct: 1065 CRQRGCFEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQL 1123

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSS------ 112
            E+  E +  +E L++LD+ G+AI+  PSSI  ++ L+ L+   C    N P S       
Sbjct: 1124 ESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSL 1183

Query: 113  -----ASC--YLPFPINLMRRSS-------DLGAL--MLPSLSGLGSLTKLDLSDCGLGE 156
                  SC      P NL R  S       D  ++    PSLSGL SL  L L +CGL E
Sbjct: 1184 KTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINCGLRE 1243

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
              IPS I +L SL+ L L  N F ++P  I+ L  L  L L  CK LQ +P+ P N+  +
Sbjct: 1244 --IPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTL 1301

Query: 217  RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
              + C SL      L        I  FV   K+L                        + 
Sbjct: 1302 VAHQCTSLKISSSLLWSPFFKSGIQKFVPRGKVLD-----------------------TF 1338

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---------KHSTG 327
            +   + IP+W  +Q +GS IT+T P      +  +G+A C + HVP         +    
Sbjct: 1339 IPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNF 1397

Query: 328  IRRFYRYPHPAHVL-------HCSM----DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE 376
            I +     +P+ V+       HC      DE      S+ LWL+ + + S   N+   + 
Sbjct: 1398 ICKLNFNNNPSLVVRDIQSRRHCQSCRDGDE------SNQLWLIKIAK-SMIPNI---YH 1447

Query: 377  SNHFRL---SFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNL 433
            SN +R    SF ++ +          +KV+RCGF   Y  +      T  Q +  +    
Sbjct: 1448 SNKYRTLNASFKNDFDT-------KSVKVERCGFQLLYAQDYGHNHLTIVQGSSSS---- 1496

Query: 434  NEFHHDFVGSNMAVAKANGSGCCDDYD 460
               H D  G   AV   N    CD+ +
Sbjct: 1497 ---HGDLGGHRSAVQDTND---CDNQE 1517



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 187/444 (42%), Gaps = 71/444 (15%)

Query: 30   LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
            LTLKGC  L  LP  I   K L+TL+   C K +   E  G +  L ELD+SGTAI   P
Sbjct: 643  LTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELP 702

Query: 90   SSIFL--MKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
            SS     +K LK LSFRGC   N  P+   C                         L SL
Sbjct: 703  SSSSFGHLKALKILSFRGCSKLNKIPTDVCC-------------------------LSSL 737

Query: 145  TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
              LDLS C + EG IPSDI  L SLK L L  N+F ++PA+IN L  L+ L L  C+ L+
Sbjct: 738  EVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINRLSRLQVLNLSHCQNLE 797

Query: 205  SLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
             +P+LP ++  +  +G            L  S+ + + F   +         ++   +  
Sbjct: 798  HIPELPSSLRLLDAHG----------PNLTLSTASFLPFHSLVNCFNSEIQDLNQCSQNC 847

Query: 265  EVVSAPSHKFSIVVPG-SEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP- 322
               +   +   IV+PG S +P+W M +       +  P      N+ +G+A C V+ VP 
Sbjct: 848  NDSAYHGNGICIVLPGHSGVPEWMMGRR-----AIELPQNWHQDNEFLGFAICCVY-VPL 901

Query: 323  -KHSTGIRR----FYRYPHPAHVLHCSMDEKFGHRGSDHLWL--LYLPRQSYYCNVKWHF 375
               S  I             AH      D++  +  +  L+   +YLP     C ++++ 
Sbjct: 902  DDESEDISENESDHKSQDESAHTSENETDDESKNESAAELFSEDVYLPSCCLKCALRFYG 961

Query: 376  ESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNE 435
            +++  R + + + E HC         V R  +   Y  E        K+W     Y  ++
Sbjct: 962  DND--RSTDIHKFESHCLCYGQGNDSVSRQTWVILYSKEA------LKEW-----YLADD 1008

Query: 436  FHH---DFVGSNMAVAKANGSGCC 456
             HH    F GS     KA   G C
Sbjct: 1009 GHHLSPTFGGSYNTFKKAFKEGKC 1032



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 3/111 (2%)

Query: 1   MECLRELLLDKTDIKEMPLSIEL--LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG 58
           M  LREL L  T I+E+P S     L  L  L+ +GC  L ++P+++  L SL+ L+L  
Sbjct: 685 MRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSY 744

Query: 59  CFKFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
           C   E  + + + ++ SL+EL++     R  P++I  +  L+ L+   C  
Sbjct: 745 CNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINRLSRLQVLNLSHCQN 795


>gi|296089464|emb|CBI39283.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 178/449 (39%), Gaps = 67/449 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME +  L LD T IK +P SI  L+ L  L ++ CKNL  LP+NI  LKSL+ ++L GC 
Sbjct: 155 MESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCS 214

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
           K E  LE    +E LE L +  TAI   P SI  ++ LK+L    C      P S     
Sbjct: 215 KLEAFLEIREDMEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKLVSLPDSIGNLT 274

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +R  S L  L     S    L  LDL  C L EG IP D+  L SL+ L +S N
Sbjct: 275 CLRSLFVRNCSKLHNLPDNLRSLKCCLRVLDLGGCNLMEGEIPHDLWCLSSLEYLDISDN 334

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
               +P  I+ L  L  L +  C  L+ + +LP +   +  +GC  L T           
Sbjct: 335 YIRCIPVGISQLSKLRTLLMNHCPMLEEITELPSSRTWMEAHGCPCLET----------- 383

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSI 296
                         +   ++          S    KF+IV+PGS  IP+W  +Q  G  +
Sbjct: 384 --------------ETSSSLLWSSLLKRFKSPIQWKFNIVIPGSSGIPEWVSHQRMGCEV 429

Query: 297 TVTRPSYLCNMNQVVGYAACRVFHVP-----------------------KHSTGIRR--- 330
            +  P      N ++G+      HVP                        H     +   
Sbjct: 430 KIKLPMNWYEDNNLLGFVL-FFHHVPHDDDECETTMYSTMFIPQCILTISHGDQYEQLDN 488

Query: 331 --FYRYPHPAHVLHCSMDEKF---GHRGSDHLWLLYLPR---QSYYCNVKWHFESNHFRL 382
             FY       V   S D  +   G      LW+ Y P+    S Y + KW++   HF  
Sbjct: 489 ICFYHRCKRYWVSGLSYDSMYYDNGDTSDPALWVTYFPQIAIPSKYRSRKWNYFKAHFE- 547

Query: 383 SFMDEREKHCPAGSGTGLKVKRCGFHPGY 411
           + MD     C  G     KVK CG H  Y
Sbjct: 548 TPMDRGSFRC--GDNASFKVKSCGIHLIY 574



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 29/232 (12%)

Query: 40  RLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
            LPS+I  L+SLK LNL  C  FE  LE  G ++ L EL +  TAI+  P++I  ++ L+
Sbjct: 76  ELPSSIGYLESLKILNLSYCSNFEKFLEIQGSMKHLRELSLKETAIKELPNNIGRLEALE 135

Query: 100 TLSFRGCNGPPS------------------SASCYLPFPINLMRRSSDL------GALML 135
            LSF GC+                      +A   LP  I+ + R   L          L
Sbjct: 136 ILSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCL 195

Query: 136 P-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           P ++ GL SL  + L+ C   E  +     ++  L+ L+L +     LP SI  L  L+ 
Sbjct: 196 PNNICGLKSLRGISLNGCSKLEAFLEIR-EDMEQLERLFLLETAITELPPSIEHLRGLKS 254

Query: 195 LKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLLGALKLRKSSCTIIDF 243
           L+L +C++L SLP    N+  +R   V  C+ L  L   L+  K    ++D 
Sbjct: 255 LELINCEKLVSLPDSIGNLTCLRSLFVRNCSKLHNLPDNLRSLKCCLRVLDL 306



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 13/195 (6%)

Query: 42  PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
           P  I SL SLK L+L  C KFE   E    +  L EL +  + I+  PSSI  +++LK L
Sbjct: 31  PIYIRSLTSLKILSLRECSKFEKFSEMFTNMGLLTELRLDESRIKELPSSIGYLESLKIL 90

Query: 102 SFRGCNGPPSSASCYLPFPINL--MRRSS--DLGALMLPSLSG-LGSLTKLDLSDCGLGE 156
           +   C    S+   +L    ++  +R  S  +     LP+  G L +L  L  S C   E
Sbjct: 91  NLSYC----SNFEKFLEIQGSMKHLRELSLKETAIKELPNNIGRLEALEILSFSGCSNFE 146

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
              P    N+ S+ +L L       LP SI+ L  L+ L++E+CK L+ LP     ++ +
Sbjct: 147 -KFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSL 205

Query: 217 R---VNGCASLVTLL 228
           R   +NGC+ L   L
Sbjct: 206 RGISLNGCSKLEAFL 220


>gi|357507449|ref|XP_003624013.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355499028|gb|AES80231.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 520

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 148/288 (51%), Gaps = 30/288 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L L+   I+ +P S+  L GL  L LK CK+LV LP  I+ L SL  LN+ GC 
Sbjct: 158 MENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTIHRLNSLIILNISGCS 217

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + + +++ L+EL  + TAI   PSSIF + NLK++   G       AS    FP
Sbjct: 218 RLCRLPDGLKEIKCLKELHANDTAIDELPSSIFYLDNLKSIIIFG----SQQASTGFRFP 273

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                           SL  L SL  ++LS C L E +IP  + +L SLK+L L+ NNFV
Sbjct: 274 T---------------SLWNLPSLRYINLSYCNLSEESIPDYLRHLSSLKSLDLTGNNFV 318

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS-CT 239
            +P++I+ L  L  L L  C++LQ LP++  ++ ++  + C SL T     K   +  C+
Sbjct: 319 YIPSTISKLPKLHFLYLNCCQKLQLLPEISSSMTELDASNCDSLET----TKFNPAKPCS 374

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
           +      L  + K       +  F+E +  PS +F +++PG E P  +
Sbjct: 375 VFASPRQLSYVEKK------INSFIEGLCLPSARFDMLIPGKETPSCY 416


>gi|408537066|gb|AFU75186.1| nematode resistance-like protein, partial [Solanum chacoense]
          Length = 307

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 140/228 (61%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELXLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K +NL + +  +  LEEL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 131 KLKNLPDDLXLLVGLEELHCTHTAIQTIPSSMSLLKNLKXLSLXGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G I S++G L SL+ L L+ NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L++LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPXASISXLTRLKRLKLHSCGRLESLPELPPSIKGIYANECTSLMSI 290


>gi|147799119|emb|CAN61627.1| hypothetical protein VITISV_024719 [Vitis vinifera]
          Length = 1520

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 217/507 (42%), Gaps = 103/507 (20%)

Query: 3    CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            C +    + +D+KE+P+ IE    L  L L+GCK L  LPS+I   KSL TL   GC + 
Sbjct: 1049 CRQRGCFEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQL 1107

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSS------ 112
            E+  E +  +E L++LD+ G+AI+  PSSI  ++ L+ L+   C    N P S       
Sbjct: 1108 ESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSL 1167

Query: 113  -----ASC--YLPFPINLMRRSS-------DLGAL--MLPSLSGLGSLTKLDLSDCGLGE 156
                  SC      P NL R  S       D  ++    PSLSGL SL  L L +CGL E
Sbjct: 1168 KTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNCQXPSLSGLCSLRILRLINCGLRE 1227

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
              IPS I +L SL+ L L  N F ++P  I+ L  L  L L  CK LQ +P+ P N+  +
Sbjct: 1228 --IPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLXTL 1285

Query: 217  RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
              + C SL      L        I  FV   K L                        + 
Sbjct: 1286 VAHQCTSLKISSSLLWSPFFKSGIQKFVPXXKXLD-----------------------TF 1322

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP---------KHSTG 327
            +   + IP+W  +Q +GS IT+T P      +  +G+A C + HVP         +    
Sbjct: 1323 IPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNF 1381

Query: 328  IRRFYRYPHPAHVL-------HCSM----DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE 376
            I +     +P+ V+       HC      DE      S+ LWL+ + + S   N+   + 
Sbjct: 1382 ICKLNFNNNPSLVVRDIQSRRHCQXCRDGDE------SNQLWLIKIAK-SMIPNI---YH 1431

Query: 377  SNHFRL---SFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNL 433
            SN +R    SF ++ +          +KV+RCGF   Y  +      T  Q +  +    
Sbjct: 1432 SNKYRTLNASFKNDFDT-------KSVKVERCGFQLLYAQDXGXNHLTIVQGSSSS---- 1480

Query: 434  NEFHHDFVGSNMAVAKANGSGCCDDYD 460
               H D  G   AV   N    CD+ +
Sbjct: 1481 ---HGDLGGHRSAVQDTND---CDNQE 1501



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 95/205 (46%), Gaps = 31/205 (15%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTLKGC  L  LP  I   K L+TL+   C K +   E  G +  L ELD+SGTAI   P
Sbjct: 669 LTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELP 728

Query: 90  SSIFL--MKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
           SS     +K LK LSFRGC   N  P+   C                         L SL
Sbjct: 729 SSSSFGHLKALKILSFRGCSKLNKIPTDVCC-------------------------LSSL 763

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
             LDLS C + EG IPSDI  L SL  L L  N+F ++PA+IN L  L+ L L     +Q
Sbjct: 764 EVLDLSYCNIMEGGIPSDICRLSSLXELNLKSNDFRSIPATINRLSRLQTLDLHGA-FVQ 822

Query: 205 SLPQLPPNVEKVRVNGCASLVTLLG 229
            L Q   N      +G    + L G
Sbjct: 823 DLNQCSQNCNDSAYHGNGICIVLPG 847



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 1   MECLRELLLDKTDIKEMPLSIEL--LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG 58
           M  LREL L  T I+E+P S     L  L  L+ +GC  L ++P+++  L SL+ L+L  
Sbjct: 711 MRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSY 770

Query: 59  CFKFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG 105
           C   E  + + + ++ SL EL++     R  P++I  +  L+TL   G
Sbjct: 771 CNIMEGGIPSDICRLSSLXELNLKSNDFRSIPATINRLSRLQTLDLHG 818


>gi|225464430|ref|XP_002264399.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1673

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 162/326 (49%), Gaps = 33/326 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LR+L L++T I+E+P SI+ L GL  L+++ C NLV LP +I +L SLK L +  C 
Sbjct: 1202 MENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVDCCP 1261

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFR-GCNGPPSSASCYLPF 119
            K   L E +G + SLEEL                     T S+  GC  P  S  C L  
Sbjct: 1262 KLYKLPENLGSLRSLEEL-------------------YATHSYSIGCQLPSLSGLCSLRI 1302

Query: 120  PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
               L  ++S+L    +P+ +  L SL  L+LS+  L EG IP +I NL SL+ L L  N+
Sbjct: 1303 ---LDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNH 1359

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            F ++P  I+ L  L  L L  C+ L  +P+   +++ + V+ C SL TL     L + SC
Sbjct: 1360 FSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLLQ-SC 1418

Query: 239  TIIDFVDSLKLLG-KNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSI 296
             +  F   ++ L  +N + I        V    +   SI +P S  IP+W  YQ EGS +
Sbjct: 1419 LLKCFKSLIQDLELENDIPIEP-----HVAPYLNGGISIAIPRSSGIPEWIRYQKEGSKV 1473

Query: 297  TVTRPSYLCNMNQVVGYAACRVFHVP 322
                P      +  +G+A   + HVP
Sbjct: 1474 AKKLPRNWYKNDDFLGFALFSI-HVP 1498



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 146/318 (45%), Gaps = 56/318 (17%)

Query: 1   MECLRELLLDKTDIKEMPLS-IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M+ LREL L +TD+KE+P S  + L GL  L L GC+NL+ +P +I +++SLK L+   C
Sbjct: 702 MKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYC 761

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K + L E +  +  LE L ++   +RC    +  + +LK LS                 
Sbjct: 762 PKLDKLPEDLESLPCLESLSLN--FLRCELPCLSGLSSLKELSL---------------- 803

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                   S++   ++P+ +GL SL  L L+   +  G I S+I  L SL+ L L  N+F
Sbjct: 804 ------DQSNITGEVIPNDNGLSSLKSLSLNYNRMERG-ILSNIFCLSSLEELKLRGNHF 856

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
            T+PA I+ L  L  L L  CK+L  +P+LP ++  +  +G  S VTL            
Sbjct: 857 STIPAGISKLPRLRSLNLSHCKKLLQIPELPSSLRALDTHG--SPVTLSSG--------- 905

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVV--PG-SEIPKWFMYQNEGSSI 296
                             S+L+ F   +      F+ VV  PG S IPKW     +GS  
Sbjct: 906 ----------------PWSLLKCFKSAIQETDCNFTKVVFIPGDSGIPKWINGFQKGSYA 949

Query: 297 TVTRPSYLCNMNQVVGYA 314
               P      N  +G++
Sbjct: 950 ERMLPQNWYQDNMFLGFS 967


>gi|224127754|ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1125

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 179/418 (42%), Gaps = 80/418 (19%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            ++ L L  T I+E+P SIE L+ LV+L +  CK L  +PS+I  LKSL+ L L GC K E
Sbjct: 754  IKYLYLQGTAIEEVPSSIEFLTALVRLYMTNCKQLSSIPSSICKLKSLEVLGLSGCSKLE 813

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            N  E +  +ESL  L++  TAI+  PSSI  +K L  L   G       +S         
Sbjct: 814  NFPEIMEPMESLRRLELDATAIKELPSSIKYLKFLTQLKL-GVTAIEELSS--------- 863

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                         S++ L SLT LDL    + E  +PS I +L  LK L LS        
Sbjct: 864  -------------SIAQLKSLTHLDLGGTAIKE--LPSSIEHLKCLKHLDLSGTG----- 903

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
                               ++ LP+LP ++  + VN C SL T L    LR  +   ++F
Sbjct: 904  -------------------IKELPELPSSLTALDVNDCKSLQT-LSRFNLR--NFQELNF 941

Query: 244  VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSY 303
             +  KL  K  +A    +  ++        F IV+P SEIP WF  QN GSS+T   P  
Sbjct: 942  ANCFKLDQKKLMADVQCK--IQSGEIKGEIFQIVLPKSEIPPWFRGQNMGSSVTKKLP-- 997

Query: 304  LCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLY-- 361
              N +Q+ G A C VF  P                    C  D K  +   DH+ LL+  
Sbjct: 998  -LNCHQIKGIAFCIVFASPTPLLS---------DCANFSCKCDAKSDNGEHDHVNLLWYD 1047

Query: 362  LPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGL-----------KVKRCGFH 408
            L  Q      K   +S+H  L +   R       SG+ +           K+KRCG +
Sbjct: 1048 LDPQPKAAVFKLD-DSDHMLLWYESTRTGLTSEYSGSEVTFEFYDKIEHSKIKRCGVY 1104


>gi|255569048|ref|XP_002525493.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223535172|gb|EEF36851.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1084

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 152/310 (49%), Gaps = 29/310 (9%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +++L LD T I+E+P SI+    LV+L+L+ CK  +RLP  I   K L+ LNL GC  F 
Sbjct: 625 IKKLFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRTIWKFKLLQKLNLSGCSTFV 684

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           +  E +  + SL+ L + GT I   PS +  +  L +L  R C               NL
Sbjct: 685 SFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCK--------------NL 730

Query: 124 MRRSSDLGALMLPS---LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 +   ++ S   + G+  L KL+LS C L E  +P  I  L SL++L LS+N F 
Sbjct: 731 YGLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLLE--VPYCIDCLPSLESLDLSRNLFE 788

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            +P SIN LF L+ L L DCK+L SLP LPP + K+  + C SL +   +L         
Sbjct: 789 EIPVSINKLFELQYLGLRDCKKLISLPDLPPRLTKLDAHKCCSLKS--ASLDPTGIEGNN 846

Query: 241 IDFV----DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE---IPKWF-MYQNE 292
            +F      SL L  +  +    L +F        H+ S ++ G     IP W   + ++
Sbjct: 847 FEFFFTNCHSLDLDERRKIIAYALTKFQVYSERLHHQMSYLLAGESSLWIPSWVRRFHHK 906

Query: 293 GSSITVTRPS 302
           G+S TV  PS
Sbjct: 907 GASTTVQLPS 916



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNL-----------VRLPSNINSLK 49
           M  L+ L LD T I  +P  +  L GL+ L L+ CKNL           V+ P+ +  ++
Sbjct: 693 MGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLYGLQEVISGRVVKSPATVGGIQ 752

Query: 50  SLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            L+ LNL GC   E +   +  + SLE LD+S       P SI  +  L+ L  R C
Sbjct: 753 YLRKLNLSGCCLLE-VPYCIDCLPSLESLDLSRNLFEEIPVSINKLFELQYLGLRDC 808


>gi|359493572|ref|XP_002270741.2| PREDICTED: uncharacterized protein LOC100261885 [Vitis vinifera]
          Length = 2338

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 200/442 (45%), Gaps = 79/442 (17%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LREL L++T IKE+P SIE L+ L  L L+GCK LV LP +I +L  L+ L++  C 
Sbjct: 1151 MENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLDVSYCS 1210

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K   L + +G+++SL+ L   G  +  C   S+  + +LK L   G              
Sbjct: 1211 KLHKLPQNLGRLQSLKHLCACGLNSTCCQLVSLLGLCSLKNLILPG-------------- 1256

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                   S  +  ++L  +  L SL  LDLS C + EG IP++I +L SL+ L+LS N F
Sbjct: 1257 -------SKLMQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSSLQHLHLSGNLF 1309

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC- 238
             ++P+ +N L  L  L L  C+ L+ +P LP ++  + V+ C  L T  G L     +C 
Sbjct: 1310 RSIPSGVNQLSMLRILNLGHCQELRQIPALPSSLRVLDVHECPWLETSSGLLWSSLFNCF 1369

Query: 239  --TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPKWFMYQNEGSS 295
               I DF    ++  ++ L                 + ++++ GS  IPKW  +  +G+ 
Sbjct: 1370 KSLIQDF--ECRIYPRDSLFA---------------RVNLIISGSCGIPKWISHHKKGAK 1412

Query: 296  ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSM-----DEKF- 349
            +    P      N ++G+    ++    + +         + A  L CS+     + +F 
Sbjct: 1413 VVAKLPENWYKNNDLLGFVLYSLYDPLDNESE----ETLENDAAYLKCSLTLRAHESQFV 1468

Query: 350  -------GHRGSD---HLWLLYLPR----QSYYCNVKWHFESNHFRLSFMDEREKHCPAG 395
                     R  D    +W++Y  +    + Y+ N KW   +  F           C   
Sbjct: 1469 DELQFYPSFRCYDVVPKMWMIYYAKVVIEKKYHSN-KWRQLTASF-----------CGFS 1516

Query: 396  SGTGLKVKRCGFHPGYMHEVEE 417
             G  +KV+ CG H  Y H+ E+
Sbjct: 1517 HGKAMKVEECGIHLIYAHDHEK 1538



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 178/428 (41%), Gaps = 56/428 (13%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+L L    I  +P  IE  S    L L+ CKNL  LP++I   KSLK+L    C + + 
Sbjct: 1876 RKLCLKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQY 1933

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
              E +  +E+L EL ++ TAI+  PSSI  +  L+ L+   C          L F    +
Sbjct: 1934 FPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCEN-------LLLFKTPQI 1986

Query: 125  RRSSDLGALMLPSLSGLGSLTKLDLSD-CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                   A +  S         L ++   G+ EG IP++I +L SL+ L L+ N F ++P
Sbjct: 1987 ATKPREAAKLEASPCLWLKFNMLPIAFFVGIDEGGIPTEICHLSSLRQLLLTGNLFRSIP 2046

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
            + +N L  L  L L  C+ L+ +P LP ++  + V+ C  L T  G L     +C     
Sbjct: 2047 SGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHECTRLETSSGLLWSSLFNC----- 2101

Query: 244  VDSLKLLGKNGLAISMLREFLEVVSAPSHKFS---IVVPGS-EIPKWFMYQNEGSSITVT 299
                          S++++F   +    ++F+   +++ GS  IPKW  +  +G+ +   
Sbjct: 2102 ------------FKSLIQDFECRIYPRENRFARVHLIISGSCGIPKWISHHKKGAKVVAE 2149

Query: 300  RPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGS--DHL 357
             P      N ++G+    ++  P  +        Y   A  L C +  +  H     D L
Sbjct: 2150 LPENWYKNNDLLGFVLYSLYD-PLDNESEETLENY---ATSLKCGLTLR-AHESQFVDEL 2204

Query: 358  WLLYLPRQSYYC----------NVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
                    S  C          N  W  E    + SF         +  GT ++VK  GF
Sbjct: 2205 RCRICGESSQMCVTCYPKVAINNQYWSNEWRRLKASFR--------SFDGTPVEVKEWGF 2256

Query: 408  HPGYMHEV 415
            H  Y  +V
Sbjct: 2257 HLIYTGDV 2264



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+L L  + I E+P +IE       L L+ CKNL RLPS+I  LKSL TLN  GC +  +
Sbjct: 1560 RKLCLKGSAINELP-TIECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRS 1618

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-----PPSSASCYLP 118
              E +  VE+L  L + GTAI+  P+SI  ++ L+ L+   C         SS   +LP
Sbjct: 1619 FPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLDLKHEKSSNGVFLP 1677



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 1/105 (0%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL LD+T IKE+P SIELL GL  L L  CKNL  LP++I +L+ L  L+L GC K +
Sbjct: 669 LEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLD 728

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
            L E + ++  L EL+    A       +  +    +  F G NG
Sbjct: 729 RLPEDLERMPCL-ELNWDLIATYAFSGELPQISKSASYEFDGANG 772



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 66/152 (43%), Gaps = 20/152 (13%)

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCA------SLVTLL 228
            N   LP+SI  L +L  L    C RL+S P++  +VE +R   ++G A      S+  L 
Sbjct: 1591 NLERLPSSICELKSLTTLNCSGCSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLR 1650

Query: 229  GALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWF 287
            G   L  + CT +D          NG+       FL           IVVPGS  IPKW 
Sbjct: 1651 GLQCLNLADCTNLDLKHEK---SSNGV-------FLPNSDYIGDGICIVVPGSSGIPKWI 1700

Query: 288  MYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
              Q EG  IT+  P      +  +G A C V+
Sbjct: 1701 RNQREGYRITMELPQNCYENDDFLGIAICCVY 1732



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 48/348 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L+L  ++IK +      L  L ++ L   + L+ LP N +++ +L+ L L GC    
Sbjct: 604 LVSLILGNSNIKLLWKGNMCLRNLRRINLSDSQQLIELP-NFSNVPNLEELILSGC---- 658

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFP 120
            ++     +  LEEL +  TAI+  PSSI L++ L+ L+   C    G P+S  C L F 
Sbjct: 659 -IILLKSNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSI-CNLRFL 716

Query: 121 I--------NLMRRSSDLGAL--------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG 164
           +         L R   DL  +        ++ + +  G L ++  S     +GA  + +G
Sbjct: 717 VVLSLEGCSKLDRLPEDLERMPCLELNWDLIATYAFSGELPQISKSASYEFDGA--NGVG 774

Query: 165 NLHSLKTLYLSKNNFVTLPASINCLFNL-EKLKLEDCKRLQSLPQLPPNVEKVRVNGCAS 223
           N+ S + L  + +    +      L  L  +      K    +  L   V +   +   +
Sbjct: 775 NMVSREELLPASSQVFPVANRSPGLLELGNREPGTQSKSFDRISLLQIGVHRPLPDSKVT 834

Query: 224 LVTL-LGALKLRKSSCTIIDF--VDSLK--------LLGKNGLAISMLREFLEVVSAPSH 272
             T+ +   + R    TI ++  VDS+K            NG+       FL      S 
Sbjct: 835 RKTVKIPFDRFRPKVITIEEWNTVDSIKPDEIDLKHEKSSNGV-------FLPNSDYISD 887

Query: 273 KFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
              IVVPGS  IPKW   Q EG  IT+  P      +  +G A C V+
Sbjct: 888 GICIVVPGSSGIPKWIRNQTEGYHITMGLPQNCYENDDFLGIAICSVY 935



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 17/124 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRL--------PSNINSLKSLK 52
            ME LREL L++T IKE+P SIE L+ L  L L  C+NL+          P     L++  
Sbjct: 1941 MENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLLLFKTPQIATKPREAAKLEASP 2000

Query: 53   TL----NLLGCFKFENLLE-----TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
             L    N+L    F  + E      +  + SL +L ++G   R  PS +  +  L+ L  
Sbjct: 2001 CLWLKFNMLPIAFFVGIDEGGIPTEICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRLLDL 2060

Query: 104  RGCN 107
              C 
Sbjct: 2061 GHCQ 2064


>gi|356553715|ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1127

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 188/370 (50%), Gaps = 45/370 (12%)

Query: 1    MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
            M+ L EL+L   + +K++P   + +  L  + L+ CKNL+ LP +I +LKSL+ L++ GC
Sbjct: 699  MDSLEELILSGCSKVKKLPNFGKNMQHLSLVNLEKCKNLLWLPKSIWNLKSLRKLSICGC 758

Query: 60   FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             KF  L  ++ +  SLEELD+SGT IR   SS   ++NLK LSF G N   S++   L  
Sbjct: 759  SKFSTLPNSMNENGSLEELDVSGTPIREITSSKVCLENLKELSFGGRNELASNSLWNLHQ 818

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             I++ RR      L+LP+LS L SL  L+LS C L + +IP  +G+L SL  L LS NNF
Sbjct: 819  RISMHRRQQVPKELILPTLSRLTSLKFLNLSYCDLNDESIPDSLGSLLSLLGLNLSGNNF 878

Query: 180  VTLPAS-INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---------VNGCASLVTLLG 229
            V+ P   I+ L  L+ L L DC RL+SLP LPP+ + +          +N  A ++  + 
Sbjct: 879  VSPPTRCISNLHTLQSLTLIDCPRLESLPMLPPSAQCLGTTNSTQMKPLNSDAYMLWKIY 938

Query: 230  ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK----FSIVVPGSEIPK 285
             L + ++       + +L L   N         +   V A   +    F  ++PG EI K
Sbjct: 939  ELHMNQTYFLYTHSLPTLPLTHPN---------YFHKVCAYQMEDRPHFLFIIPGREIQK 989

Query: 286  W----FM-------YQNEGS----SITVTRPSYLCNMNQVVGYAACRVFHVP--KHSTGI 328
            W    F+       Y   GS    SI V  P+YL +    +G A C     P  +HS+  
Sbjct: 990  WNEVFFLIDPSHHPYNRLGSDSVASIIVDVPNYLVSSGW-LGIAICLALEPPNMQHSSP- 1047

Query: 329  RRFYRYPHPA 338
               +  PHP 
Sbjct: 1048 --SHVSPHPV 1055


>gi|147812101|emb|CAN61526.1| hypothetical protein VITISV_036339 [Vitis vinifera]
          Length = 2047

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 162/326 (49%), Gaps = 33/326 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LR+L L++T I+E+P SI+ L GL  L+++ C NLV LP +I +L SLK L +  C 
Sbjct: 1144 MENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVDCCP 1203

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFR-GCNGPPSSASCYLPF 119
            K   L E +G + SLEEL                     T S+  GC  P  S  C L  
Sbjct: 1204 KLYKLPENLGSLRSLEEL-------------------YATHSYSIGCQLPSLSGLCSLRI 1244

Query: 120  PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
               L  ++S+L    +P+ +  L SL  L+LS+  L EG IP +I NL SL+ L L  N+
Sbjct: 1245 ---LDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNH 1301

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            F ++P  I+ L  L  L L  C+ L  +P+   +++ + V+ C SL TL     L + SC
Sbjct: 1302 FSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLLQ-SC 1360

Query: 239  TIIDFVDSLKLLG-KNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSI 296
             +  F   ++ L  +N + I        V    +   SI +P S  IP+W  YQ EGS +
Sbjct: 1361 LLKCFKSLIQDLELENDIPIEP-----HVAPYLNGGISIAIPRSSGIPEWIRYQKEGSKV 1415

Query: 297  TVTRPSYLCNMNQVVGYAACRVFHVP 322
                P      +  +G+A   + HVP
Sbjct: 1416 AKKLPRNWYKNDDFLGFALFSI-HVP 1440



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 122/300 (40%), Gaps = 65/300 (21%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR-CP 88
           L L+GC NL+ LPS+I  LK L+TL    C K  +  E   ++++L EL +S T ++  P
Sbjct: 660 LILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELP 719

Query: 89  PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD 148
            SS   +K L  L   GC         ++P  I  MR    L     P L  L       
Sbjct: 720 SSSTKHLKGLTDLDLTGCRN-----LIHVPKSICAMRSLKALSFSYCPKLDKL------- 767

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLS-----------KNNFVTLPASINCLFNLEKLKL 197
                      P D+ +L  L++L L+            N+F T+PA I+ L  L  L L
Sbjct: 768 -----------PEDLESLPCLESLSLNFLRCELPCXVRGNHFSTIPAGISKLPRLRSLNL 816

Query: 198 EDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAI 257
             CK+L  +P+LP ++  +  +G  S VTL                              
Sbjct: 817 SHCKKLLQIPELPSSLRALDTHG--SPVTLSSG-------------------------PW 849

Query: 258 SMLREFLEVVSAPSHKFSIVV--PG-SEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYA 314
           S+L+ F   +      F+ VV  PG S IPKW     +GS      P      N  +G++
Sbjct: 850 SLLKCFKSAIQETDCNFTKVVFIPGDSGIPKWINGFQKGSYAERMLPQNWYQDNMFLGFS 909



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 12/118 (10%)

Query: 1   MECLRELLLDKTDIKEMPLS-IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M+ LREL L +TD+KE+P S  + L GL  L L GC+NL+ +P +I +++SLK L+   C
Sbjct: 702 MKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYC 761

Query: 60  FKFENLLETVGQVESLEELD-----------ISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            K + L E +  +  LE L            + G      P+ I  +  L++L+   C
Sbjct: 762 PKLDKLPEDLESLPCLESLSLNFLRCELPCXVRGNHFSTIPAGISKLPRLRSLNLSHC 819


>gi|359493556|ref|XP_003634626.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1148

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 39/312 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+E+ LD T IKE+P SI+ L+ +  L++  CKN+  L S+I SLKSL+ L L GC   E
Sbjct: 725 LKEIRLDGTPIKELPFSIDDLTLVKILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCSNLE 784

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
              E    + SLE L +S TAI+  P +I  +K L+ L   GC       S    FP   
Sbjct: 785 TFPEITEDMASLELLSLSETAIKELPPTIQHLKQLRLLFVGGC-------SRLEKFP--- 834

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                     +L SL    SL  LDLS+  L +GAIP++I  L  L+ L L +NNF  +P
Sbjct: 835 ---------KILESLK--DSLINLDLSNRNLMDGAIPNEIWCLSLLEILNLRRNNFRHIP 883

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
           A+I  L  L  LK+  CK LQ  P++P +++ +  + C SL T   +    K   +++ +
Sbjct: 884 AAITQLRKLTLLKISHCKMLQGFPEVPLSLKHIEAHDCTSLET--LSSPSSKLWSSLLQW 941

Query: 244 VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPS 302
             S K              F +  + P     I++PGS  IP W ++Q     + +  P 
Sbjct: 942 FKSAK--------------FQDHEAQPKCA-GIMIPGSSGIPGWVLHQEMEREVRIELPM 986

Query: 303 YLCNMNQVVGYA 314
             C  N  +G+ 
Sbjct: 987 NWCKDNHFLGFV 998


>gi|357474671|ref|XP_003607620.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508675|gb|AES89817.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1381

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 209/465 (44%), Gaps = 77/465 (16%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL++  + +K++    + L  L  L L   KNL ++P +   + +L+ LNL GC K  
Sbjct: 920  LVELIMRHSSVKQLWKDKKYLPNLKILDLSHSKNLRKVP-DFGEMPNLEELNLKGCIKLV 978

Query: 64   NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC----NGP--------- 109
             +  ++G +  L  + +     +   P++I  + +LK L+  GC    N P         
Sbjct: 979  QIDPSIGVLRKLVFMKLKDCKNLVSIPNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDSS 1038

Query: 110  ------PSSASCYLPFPINLMRRSSD-LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                   S+ S      I L     + L + +LPS   +  L+++D+S CGL    +P  
Sbjct: 1039 DILFHSQSTTSSLKWTTIGLHSLYHEVLTSCLLPSFLSIYCLSEVDISFCGL--SYLPDA 1096

Query: 163  IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
            IG L  L+ L +  NNFVTLP S+  L  L  L LE CK L+SLPQLP            
Sbjct: 1097 IGCLLRLERLNIGGNNFVTLP-SLRELSKLVYLNLEHCKLLESLPQLP------------ 1143

Query: 223  SLVTLLGALKLRKSSCTIIDFVDSLKLLGK----NGLAISMLREFLEVVSAPS-----HK 273
               T    +   K +  ++ F  +   LG+    N +A S + + ++    PS       
Sbjct: 1144 -FPTAFEHMTTYKRTVGLVIF--NCPKLGESEDCNSMAFSWMIQLIQARQQPSTFSYEDI 1200

Query: 274  FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNM-NQVVGYAACRVFHV----PKHSTGI 328
              IV+PGSEIP WF  Q+EG SI +     + N  N  +G A C VF V    P  +T  
Sbjct: 1201 IKIVIPGSEIPIWFNNQSEGDSIRMDLSQIMDNNDNDFIGIACCAVFSVAPVDPTTTTCA 1260

Query: 329  RR---FYRYPHP-AHVLHCSMDEKFGHRG-----SDHLWLLYLPRQSYYCNVKW------ 373
            RR     R+ +  +H+    +      R      S+H+ L+Y P++S +  +KW      
Sbjct: 1261 RRPKIELRFSNSNSHLFSFIIIPVILERDHIVVKSNHMCLMYFPQKSLFDILKWIDGTLT 1320

Query: 374  HFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEF 418
            H +  + + S M         G G  L+V+ CG+H  Y  +++E 
Sbjct: 1321 HLDDINMKASIM--------KGQGLDLEVQNCGYHWVYKPDLQEL 1357


>gi|297734815|emb|CBI17049.3| unnamed protein product [Vitis vinifera]
          Length = 1651

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 199/438 (45%), Gaps = 71/438 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME LREL L++T IKE+P SIE L+ L  L L+GCK LV LP +I +L  L+ L++  C 
Sbjct: 339 MENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLDVSYCS 398

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K   L + +G+++SL+ L   G  +  C   S+  + +LK L   G              
Sbjct: 399 KLHKLPQNLGRLQSLKHLCACGLNSTCCQLVSLLGLCSLKNLILPG-------------- 444

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                  S  +  ++L  +  L SL  LDLS C + EG IP++I +L SL+ L+LS N F
Sbjct: 445 -------SKLMQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSSLQHLHLSGNLF 497

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC- 238
            ++P+ +N L  L  L L  C+ L+ +P LP ++  + V+ C  L T  G L     +C 
Sbjct: 498 RSIPSGVNQLSMLRILNLGHCQELRQIPALPSSLRVLDVHECPWLETSSGLLWSSLFNCF 557

Query: 239 --TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPKWFMYQNEGSS 295
              I DF    ++  ++ L                 + ++++ GS  IPKW  +  +G+ 
Sbjct: 558 KSLIQDF--ECRIYPRDSLFA---------------RVNLIISGSCGIPKWISHHKKGAK 600

Query: 296 ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSM-----DEKF- 349
           +    P      N ++G+    ++    + +         + A  L CS+     + +F 
Sbjct: 601 VVAKLPENWYKNNDLLGFVLYSLYDPLDNESE----ETLENDAAYLKCSLTLRAHESQFV 656

Query: 350 -------GHRGSD---HLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTG 399
                    R  D    +W++Y  +      ++  + SN +R          C    G  
Sbjct: 657 DELQFYPSFRCYDVVPKMWMIYYAKVV----IEKKYHSNKWR----QLTASFCGFSHGKA 708

Query: 400 LKVKRCGFHPGYMHEVEE 417
           +KV+ CG H  Y H+ E+
Sbjct: 709 MKVEECGIHLIYAHDHEK 726



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 196/447 (43%), Gaps = 88/447 (19%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LREL L++T IKE+P SIE L+ L  L L  C+NLV LP +I +L  L+ LN+  C 
Sbjct: 1249 MENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLVTLPESICNLCFLEVLNVSYCS 1308

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K   L + +G+++SL+ L   G  +  C   S+  + +LK L   G              
Sbjct: 1309 KLHKLPQNLGRLQSLKHLRACGLNSTCCQLLSLSGLCSLKNLILTG-------------- 1354

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                   S  +   +L  +  L SL  LDLS C + EG IP++I +L SL+ L L+ N F
Sbjct: 1355 -------SKLIQGEILSDICCLYSLEVLDLSFCSIDEGGIPTEICHLSSLRQLLLTGNLF 1407

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
             ++P+ +N L  L  L L  C+ L+ +P LP ++  + V+ C  L T  G L     +C 
Sbjct: 1408 RSIPSGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHECTRLETSSGLLWSSLFNC- 1466

Query: 240  IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS---IVVPGS-EIPKWFMYQNEGSS 295
                              S++++F   +    ++F+   +++ GS  IPKW  +  +G+ 
Sbjct: 1467 ----------------FKSLIQDFECRIYPRENRFARVHLIISGSCGIPKWISHHKKGAK 1510

Query: 296  ITVTRPSYLCNMNQVVGYAACRVFH---------VPKHSTGIR----------------R 330
            +    P      N ++G+    ++          +  ++T ++                R
Sbjct: 1511 VVAELPENWYKNNDLLGFVLYSLYDPLDNESEETLENYATSLKCGLTLRAHESQFVDELR 1570

Query: 331  FYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREK 390
            FY   H   V+              ++W++Y P+       K+H     +R         
Sbjct: 1571 FYPTFHCYDVV-------------PNMWMIYYPKVEIE---KYHSNKRRWR----QLTAS 1610

Query: 391  HCPAGSGTGLKVKRCGFHPGYMHEVEE 417
             C    G  +KV+ CG H  Y H+ E+
Sbjct: 1611 FCGFLCGKAMKVEECGIHLIYAHDHEK 1637



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 147/327 (44%), Gaps = 46/327 (14%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+L L  + I E+P +IE       L L+ CKNL RLPS+I  LKSL TLN  GC +  +
Sbjct: 748  RKLCLKGSAINELP-TIECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRS 806

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
              E +  VE+L  L + GTAI+  P+SI  ++ L+ L+   C    S     LP      
Sbjct: 807  FPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLVS-----LP------ 855

Query: 125  RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY-----LSKNNF 179
                        ++  L SL  LD+S C   E   P ++ +L  L+ L+     LS + F
Sbjct: 856  -----------ETICNLSSLKILDVSFCTKLE-EFPKNLRSLQCLECLHASGLNLSMDCF 903

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT------LLGALKL 233
             ++ A I  L  L  ++L  C+    +P+L P++  + V+ C  L T      LLG    
Sbjct: 904  SSILAGIIQLSKLRVVELSHCQGPLQVPELTPSLRVLDVHSCTCLETLSSPSSLLGVSLF 963

Query: 234  RKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNE 292
            +    TI D          NG+       FL           IVVPGS  IPKW   Q E
Sbjct: 964  KCFKSTIEDLKHE---KSSNGV-------FLPNSDYIGDGICIVVPGSSGIPKWIRNQRE 1013

Query: 293  GSSITVTRPSYLCNMNQVVGYAACRVF 319
            G  IT+  P      +  +G A C V+
Sbjct: 1014 GYRITMELPQNCYENDDFLGIAICCVY 1040



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 5/114 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E LR L LD T IKE+P SI+ L GL  L L  C NLV LP  I +L SLK L++  C 
Sbjct: 814 VENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLVSLPETICNLSSLKILDVSFCT 873

Query: 61  KFENLLETVGQVESLEELDISG--TAIRCPPS---SIFLMKNLKTLSFRGCNGP 109
           K E   + +  ++ LE L  SG   ++ C  S    I  +  L+ +    C GP
Sbjct: 874 KLEEFPKNLRSLQCLECLHASGLNLSMDCFSSILAGIIQLSKLRVVELSHCQGP 927


>gi|147767848|emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]
          Length = 2019

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 35/332 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LREL LD T I ++P SI+ L GL  LTL  C +L  +P +I +L SLK L+   C 
Sbjct: 694  MENLRELYLDDTAIVKLPSSIKHLKGLEYLTLVKCDDLKTVPQSICNLTSLKLLDFSSCS 753

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
            K E L E +  ++ LE L +   A+ C   S+  + +L+ L     N   G   S +   
Sbjct: 754  KLEKLPEDLKSLKCLETLSLH--AVNCQLPSLSGLCSLRKLYLGRSNLTQGVIQSNNLLN 811

Query: 118  PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
               +  + R++ +   +L  +  L SL +L+L +C L +G IPS++  L SL+ L LS N
Sbjct: 812  SLKVLDLSRNNVIDKGILIRICHLSSLEELNLKNCNLMDGEIPSEVCQLSSLEILDLSWN 871

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG--CASLVTLLGALKLRK 235
            +F ++PASI+ L  L+ L L  CK LQ +P+LP  +  +  +   CA             
Sbjct: 872  HFNSIPASISQLSKLKALGLSHCKMLQQIPELPSTLRLLDAHNSHCALSSPSSFLSSSFS 931

Query: 236  -------SSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPG-SEIPKWF 287
                   SS + +   DS    G+                       IV+PG S IP+W 
Sbjct: 932  KFQDFECSSSSQVYLCDSPYYFGEG--------------------VCIVIPGISGIPEWI 971

Query: 288  MYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            M QN G+ +T+  P         +G+A C  +
Sbjct: 972  MDQNMGNHVTIDLPQDWYADKDFLGFALCSAY 1003



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 54/211 (25%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           LV+L L+ C N+ +L       K+LK +NL        +   +G V +LE L + G  + 
Sbjct: 602 LVELNLR-CSNIKQLWKTETLHKNLKVINLSYSEHLNKIPNPLG-VPNLEILTLEGWCVN 659

Query: 87  CP--PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
               P SI+ ++ LKTL   GC                              SLS     
Sbjct: 660 LESLPRSIYKLRCLKTLCCSGC-----------------------------VSLS----- 685

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
                        + P  +GN+ +L+ LYL     V LP+SI  L  LE L L  C  L+
Sbjct: 686 -------------SFPEIMGNMENLRELYLDDTAIVKLPSSIKHLKGLEYLTLVKCDDLK 732

Query: 205 SLPQLPPNVEKVRV---NGCASLVTLLGALK 232
           ++PQ   N+  +++   + C+ L  L   LK
Sbjct: 733 TVPQSICNLTSLKLLDFSSCSKLEKLPEDLK 763


>gi|357474825|ref|XP_003607698.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508753|gb|AES89895.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1165

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 220/466 (47%), Gaps = 65/466 (13%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL+L+ + IK++    + L  L  L L+  K+L+++P +   + +L+ LNL GC K E
Sbjct: 611  LVELILEDSSIKQLWEGTKYLPNLRTLELRNSKSLIKVP-DFGEIPNLERLNLKGCVKLE 669

Query: 64   NLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPS----------- 111
             +  ++  +  L  L++     +   P+ +F + +L+ L+  GC    +           
Sbjct: 670  QIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTSLEYLNLSGCYKAFNTSLHLKNYIDS 729

Query: 112  -----------SASCYLPFPINLM--RRSSDLG----ALMLPSLSGLGSLTKLDLSDCGL 154
                       S   ++  P+  M  + + D+G    + +LPSL  L  L KLD+S C L
Sbjct: 730  SESASHSQSKFSIFDWITLPLQSMFPKENLDMGLAIPSCLLPSLPSLSCLRKLDISYCSL 789

Query: 155  GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP--PN 212
             +  IP  IG L  L+ L L  NNFVTLP S   L  L  L LE+C +L+  P+LP   +
Sbjct: 790  SQ--IPDAIGCLLWLERLNLGGNNFVTLP-SFRELSKLAYLNLENCMQLKYFPELPSASS 846

Query: 213  VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPS- 271
            +E    +  +           R++   I +  +  ++   + LA S + +FL+     S 
Sbjct: 847  IEHEHSHMFSD------TSYWRRAGLCIFNCPELGEMEKCSDLAFSWMIQFLQANQLESS 900

Query: 272  ----HKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFH-VPKHST 326
                 + +IV+PG+E+P+WF  QN  SSI++     + + + V+ +A C VF   P  ST
Sbjct: 901  SVFFREINIVIPGTEMPRWFNNQNMESSISIDISPIMHHDSDVIAFACCVVFSAAPYPST 960

Query: 327  GIRRFYRYPHPAHVLHCSMD-EKF----GHRG-----SDHLWLLYLPRQSYYCNVKWHFE 376
             ++  YR P   H+   S D E F     H       S+H+WL Y  R+S + ++    +
Sbjct: 961  NMKTNYRKP-VIHLCFSSGDLEVFLGIPAHTNLNMLKSNHIWLAYFTRES-FIDLMSDID 1018

Query: 377  SNHFRLSFMDER-EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
            S     +  D R E     G G  ++VK CG+   Y H+++  + T
Sbjct: 1019 S-----TLGDIRMEVLIVDGEGLDVEVKNCGYRWVYKHDLQHLNFT 1059


>gi|105922867|gb|ABF81441.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
 gi|105922933|gb|ABF81445.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1378

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 143/299 (47%), Gaps = 60/299 (20%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL +L LD+T I E+  SI  + GL  L++  CK L  +  +I  LKSLK L+L GC 
Sbjct: 780  MNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCS 839

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS---FRGCN--GPPSSASC 115
            + +N+   + +VESLEE D+SGT+IR  P+SIFL+KNL  LS    R CN    P    C
Sbjct: 840  ELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDGLRACNLRALPEDIGC 899

Query: 116  YLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                    + R++ +    LP S++ L  L KL L DC + E                  
Sbjct: 900  LSSLKSLDLSRNNFVS---LPRSINQLSGLEKLVLEDCTMLE------------------ 938

Query: 175  SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLR 234
               + + +P+ +                           + V +NGC SL T+   +KL 
Sbjct: 939  ---SLLEVPSKV---------------------------QTVNLNGCISLKTIPDPIKLS 968

Query: 235  KSSCTIIDFVDSLKLL---GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
             S  +    +D  +L    G++ +   ML  +L+ +S P   F IVVPG+EIP WF +Q
Sbjct: 969  SSQRSEFMCLDCWELYEHNGQDSMGSIMLERYLQGLSNPRPGFRIVVPGNEIPGWFNHQ 1027


>gi|298205195|emb|CBI17254.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 130/237 (54%), Gaps = 18/237 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME ++E L  +T IKE+P S+E L  +  L L  CKNL  L S+I   KS + L L GC 
Sbjct: 1   MEDMKEFLDLRTGIKELPSSMEHLLNINSLFLSDCKNLRSLLSSIRRFKSFRRLFLNGCS 60

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              N  E +  ++ LE L + GTAI+  PSSI  +K+L+ L    C    +     +P  
Sbjct: 61  SLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVT-----IPDS 115

Query: 121 INLMRRSSDLGALMLP----------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           IN +R    L  L+LP          +L GL +L +LDLS C L EG+IP+DI  L+SL 
Sbjct: 116 INDLR---CLRRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLC 172

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           TL LS N+ V++P+ I  L  L  L +  CK LQ +P+L  ++ ++  +GC  L  L
Sbjct: 173 TLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAHGCTKLEML 229


>gi|227438287|gb|ACP30633.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 160/351 (45%), Gaps = 48/351 (13%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            E +  LLLD T IK +P SIE  S L  L LK CK L  L SN+  LK L+ L L GC +
Sbjct: 724  ESIEVLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKLKCLQELILSGCSQ 783

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             E   E    +ESLE L +  T+I   P+   L  N+KT S  G N   S    +L  P+
Sbjct: 784  LEVFPEIKEDMESLEILLLDDTSITEMPNMKHL-SNIKTFSLCGTNCEVSVRVLFLSPPL 842

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN-LHSLKTLYLSKNNFV 180
                              G   LT L LS C L    IP+  GN L SL++L LS N+  
Sbjct: 843  ------------------GCSRLTDLYLSRCSLYR--IPNISGNGLSSLQSLCLSGNSIE 882

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSS 237
             LP S N L NL+   L+ CK L+SLP LP N++ +  + C SL TL   L  L +R+  
Sbjct: 883  NLPESFNQLHNLKWFDLKYCKNLKSLPVLPQNLQYLDAHECESLETLANPLTPLTVRERI 942

Query: 238  CTIIDFVDSLKL-----------------LGKNGLAISMLREFLEVVSAPSHKFSIVVPG 280
             ++  F +  KL                 L  N       R F+     P     +  P 
Sbjct: 943  HSMFMFSNCYKLNQDAQESLVGHARIKSQLMANASVKRYYRGFI-----PEPLVGVCFPA 997

Query: 281  SEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
            +EIP WF YQ  G S+ ++ P + C+ N  VG A   V    ++    +RF
Sbjct: 998  TEIPSWFFYQRLGRSLDISLPPHWCDTN-FVGLAFSVVVSFKEYEDCAKRF 1047


>gi|147799796|emb|CAN70507.1| hypothetical protein VITISV_024109 [Vitis vinifera]
          Length = 1350

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 196/473 (41%), Gaps = 97/473 (20%)

Query: 1    MECLRELLLDK------TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL 54
            M C R+  L +      +D+ E+P+ IE  S L  L L+ C+NL  LPS+I   KSL TL
Sbjct: 917  MACQRDGTLRRKCCFKGSDMNEVPI-IENPSELDSLCLQDCRNLTSLPSSIFGFKSLATL 975

Query: 55   NLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPP 110
            +  GC + E+  E +  +ESL +L ++GTAI+  PSSI  ++ L+ L  R C    N P 
Sbjct: 976  SCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPE 1035

Query: 111  S-----------SASC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLD 148
            S            + C  +   P NL R  S         D     LPSLSGL SL  L 
Sbjct: 1036 SICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLK 1095

Query: 149  LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            L DC L E   P      H  +           +P  I+ L+NL+ L L  CK LQ +P+
Sbjct: 1096 LQDCNLREFP-PVKSITYHQCR-----------IPDGISQLYNLKDLDLGHCKMLQHIPE 1143

Query: 209  LPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVS 268
            LP  +  +  + C SL  L     L  SS            L K   +    REF + + 
Sbjct: 1144 LPSRLRCLDAHHCTSLENLSSRSNLLWSS------------LFKCFKSRIQGREFRKTL- 1190

Query: 269  APSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI 328
                  + +     IP+W  +Q  G  IT+  P      +  +G+  C + HVP  +   
Sbjct: 1191 -----ITFIAESYGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSL-HVPLDTETA 1244

Query: 329  RR--------------FYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSY---YCNV 371
            +               ++ Y        C  DE    +G     L+Y P+ S    Y + 
Sbjct: 1245 KHRSFNCKLNFDHDSAYFSYQSHQFCEFC-YDEDASSQGC----LIYYPKSSIPKRYHSN 1299

Query: 372  KWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
            +W   +  F + F               +KV RCGFH  Y H+ E+ + T  Q
Sbjct: 1300 EWRTLNASFNVYF-----------GVKPVKVARCGFHFLYAHDYEQNNLTIVQ 1341



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 141/318 (44%), Gaps = 40/318 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL L  ++IK++    +L   L  + L    +L R+P + +S+ +L+ L L GC    
Sbjct: 471 LVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIP-DFSSVPNLEILTLKGCTT-R 528

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           +  ++ G +     LD+SGTAI   PSSI  +  L+TL  + C                 
Sbjct: 529 DFQKSKGDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC----------------- 571

Query: 124 MRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                 L    +P+ +  L SL  LDL  C + EG IPSDI +L SL+ L L + +F ++
Sbjct: 572 ------LKLHQVPNHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 625

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
           P +IN L  LE L L  C  L+ +P+LP  +  +  +G     +    L L         
Sbjct: 626 PTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRAPFLPLH-------- 677

Query: 243 FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRP 301
                 L+     A    R      S  +    IV+P ++ IP+W MY++         P
Sbjct: 678 -----SLVNCFSWAQDSKRTSFSDSSYHAKGTCIVLPRTDGIPEWIMYRSTIYFTKTKLP 732

Query: 302 SYLCNMNQVVGYAACRVF 319
                 N+ +G+A C V+
Sbjct: 733 QNWHQNNEFLGFAICCVY 750


>gi|449447743|ref|XP_004141627.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1127

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 190/448 (42%), Gaps = 95/448 (21%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L D T +  +  SI     L+ L+LK C NL  LPS+IN +K L+ L L GC K + + E
Sbjct: 685  LEDCTSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHIN-IKVLEVLILSGCSKVKKVPE 743

Query: 68   TVGQVESLEELDISGTAIRCPPSSI-----------------------FLMKNLKTLSFR 104
              G    L +L + GT+I   PSSI                         M +L++L   
Sbjct: 744  FSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAIEMTSLQSLDVS 803

Query: 105  GCN--GPPSSASCYLPF-PINLM-----RRSSD-----------------LGALMLPSLS 139
            GC+  G        +    +N+      RR+ D                  G   +PSL+
Sbjct: 804  GCSKLGSRKGKGDNVELGEVNVRETTRRRRNDDCNNIFKEIFLWLCNTPATGIFGIPSLA 863

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            GL SLTKL+L DC L    IP  I  + SL  L LS NNF  LP SI+ L NL++L++  
Sbjct: 864  GLYSLTKLNLKDCNLE--VIPQGIECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQ 921

Query: 200  CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK----NGL 255
            CK+L   P+LPP +  +    C SL   +   K           VD+L ++ +    N  
Sbjct: 922  CKKLVHFPKLPPRILFLTSKDCISLKDFIDISK-----------VDNLYIMKEVNLLNCY 970

Query: 256  AISMLREFLEVVSAPSHK-------FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMN 308
             ++  ++F  ++ +   K       F+I++PGSEIP WF  +  GSS+ +       N N
Sbjct: 971  QMANNKDFHRLIISSMQKMFFRKGTFNIMIPGSEIPDWFTTRKMGSSVCMEWDPDAPNTN 1030

Query: 309  QVVGYAACRV--------------FHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGS 354
             ++ +A C V              F +    TG  R          L        G +  
Sbjct: 1031 -MIRFALCVVIGLSDKSDVCNVSSFTIIASVTGKDRNDTNLKNGDDLLVDGFLVSGMKKL 1089

Query: 355  DHLWLLYLPRQ-------SYYCNVKWHF 375
            DH+W+  LPR        S Y  +K+ F
Sbjct: 1090 DHIWMFVLPRTGTLLRKISNYKEIKFRF 1117


>gi|255547494|ref|XP_002514804.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223545855|gb|EEF47358.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1082

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 198/465 (42%), Gaps = 117/465 (25%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNL---LGCFKFENLLETVGQVESLEELDISGT 83
            LV+L L    N+ +L   +  LK LK ++L   +   K  +  + +  ++ LE+LDI G 
Sbjct: 599  LVELHLPS-SNIQQLWKGMKPLKMLKVIDLSYSVNLIKTMDFRDGLWDMKCLEKLDIGGI 657

Query: 84   AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMRRSSDLGALMLPSLSGLG 142
            A +   S+       K   F          S  LP   +NLM          LPS+S L 
Sbjct: 658  AGKQLAST-------KAWDFL-------LPSWLLPRKTLNLMD--------FLPSISVLC 695

Query: 143  SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
            +L  L+LS C L EG +P+D+    SL++L LS N+FV++P SI+ L  LE L+   CK+
Sbjct: 696  TLRSLNLSYCNLAEGTLPNDLSCFPSLQSLNLSGNDFVSVPTSISKLSKLEDLRFAHCKK 755

Query: 203  LQSLPQLPPNVEKVRVNGCASLVTLLGALKLR---------------------------- 234
            LQSLP LP  +  +  +GC+SL T L  +  +                            
Sbjct: 756  LQSLPNLPSGILYLSTDGCSSLGTSLPKIITKHCQLENLCFANCERLQSLPDLSSSIVNI 815

Query: 235  ---------------------KSSCTIIDFVDSLKLLGKNGLAISMLREFL--------E 265
                                  S+ T ++ +  +++ GKN  A + L  +L        +
Sbjct: 816  SMEGLTAQENFSNPLEKDDPKASALTFLNRMQLVEIQGKNCSAFARLTSYLHYLLRHSSQ 875

Query: 266  VVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHV---- 321
             +  PS   S+ + GSEIP+WF YQ  GSSI +  P +    ++ +G+A C  F V    
Sbjct: 876  GLFNPSSHVSMCLGGSEIPEWFNYQGIGSSIELQLPQHWFT-DRWMGFAICVDFEVHDEL 934

Query: 322  --PKHSTGIRRFYRYPHPAHVLHC---------SMDEKFGHRGSDHLWLLYLPRQSYYCN 370
               +  T     + +  P  +L           +M+ K     S+ LW  ++PR S  C 
Sbjct: 935  PLSETCTLFCDLHAWVMPDQLLFLGRPSMQISGTMNIK-----SEQLWFNFMPRSSLNC- 988

Query: 371  VKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEV 415
            V W     + + SF              GLKVK CGF   Y H++
Sbjct: 989  VDWWESCGNLKASFF-----------SNGLKVKSCGFRIIYDHDI 1022


>gi|297734813|emb|CBI17047.3| unnamed protein product [Vitis vinifera]
          Length = 2101

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 190/429 (44%), Gaps = 54/429 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LR+L L+ T IKE+P SIE L+ L  L L+ CKNLV LP +I +L+ L+ LN+  C 
Sbjct: 1353 MENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCS 1412

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K   L + +G+++SL+ L   G   RC                                 
Sbjct: 1413 KLHKLPQNLGRLQSLKCLRARGLNSRCCQLLSLSGLCSLK-------------------E 1453

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            ++L+  S  +  ++L  +  L SL  +DL  CG+ EG IP++I  L SL+ L+L  N F 
Sbjct: 1454 LDLI-YSKLMQGVVLSDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLFGNLFR 1512

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            ++PA IN L  L  L L +C+ L+ +P LP ++  + ++ C  L T  G L       ++
Sbjct: 1513 SIPAGINQLSRLRLLVLGNCQELRQIPALPSSLRVLDIHLCKRLETSSGLL-----WSSL 1567

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPKWFMYQNEGSSITVT 299
             +   SL         I  L   +  +  P  + ++++  S  IP W  +  +G+ +   
Sbjct: 1568 FNCFKSL---------IQDLECKIYPLEKPFARVNLIISESCGIPDWISHHKKGAEVVAK 1618

Query: 300  RPSYLCNMNQVVGYAACRVFHVPKHST-----GIRRFYRYPHPAHVLHCSMDEKFGHRGS 354
             P      + ++G+    V++   + +         ++ Y            +K     S
Sbjct: 1619 LPQNWYKNDDLLGFVLYCVYYPLDNESEETLENGATYFEYGLTLRGHEIQFVDKLQFYPS 1678

Query: 355  DH------LWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFH 408
             H      +W++Y P+      ++  + SN +R          C    G  +KV+ CG H
Sbjct: 1679 FHVYVVPCMWMIYYPKHE----IEEKYHSNKWR----QLTASFCGYLRGKAVKVEECGIH 1730

Query: 409  PGYMHEVEE 417
              Y H+ E+
Sbjct: 1731 LIYAHDHEQ 1739



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 189/429 (44%), Gaps = 54/429 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME LR+L L+ T IKE+P SIE L+ L  L L  CKNLV LP +I +L+ L+ LN+  C 
Sbjct: 437 MENLRQLHLNGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCS 496

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K   L + +G+++SL+ L   G   RC                                 
Sbjct: 497 KLHKLPQNLGRLQSLKRLRARGLNSRCCQLLSLSGLCSLK-------------------E 537

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++L+  S  +  ++L  +  L S+  LDLS CG+ EG IP++I  L SL+ L L  N F 
Sbjct: 538 LDLIY-SKLMQGVVLSDICCLYSVEVLDLSFCGIDEGGIPTEICQLSSLQELLLIGNLFR 596

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           ++PA IN L  L  L L +C+ L+ +P LP ++  + V  C  L T  G L       ++
Sbjct: 597 SIPAGINQLSRLRLLVLSNCQELRQIPVLPSSLRVLDVQSCKRLETSSGLL-----WSSL 651

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPKWFMYQNEGSSITVT 299
            +   SL         I  L   +  +  P  + ++++  S  IP W  +  +G+ +   
Sbjct: 652 FNCFKSL---------IQDLECKIYPLEKPFARVNLIISESCGIPNWISHHKKGAEVVAK 702

Query: 300 RPSYLCNMNQVVGYAACRVFHVPKHST-----GIRRFYRYPHPAHVLHCSMDEKFGHRGS 354
            P      + ++G+    V++   + +         ++ Y            +K     S
Sbjct: 703 LPQNWYKNDDLLGFVLYSVYYPLDNESEETLENDATYFEYGLTLRGHEIQFVDKLQFYPS 762

Query: 355 ------DHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFH 408
                  ++W++Y P+  Y    K+H  SN +R          C    G  +KV+ CG H
Sbjct: 763 FYGNVVPYMWMIYYPK--YEIGEKYH--SNKWR----QLTASFCGYLRGKAVKVEECGIH 814

Query: 409 PGYMHEVEE 417
             Y H+ E+
Sbjct: 815 LIYAHDHEQ 823



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 151/331 (45%), Gaps = 46/331 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ++ L +L L    I E+P +IE    L +L L+ CKNL  LPS+I  LKSL TL   GC 
Sbjct: 841  VQSLWKLCLKGNAINELP-TIECPHKLNRLCLRECKNLELLPSSICELKSLTTLFCSGCS 899

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +  +  E +  VE++ EL + GTAI   P+SI  ++ L+ L+   C+   S     LP  
Sbjct: 900  RLRSFPEILEDVENIRELHLDGTAIEELPASIQYLRGLQHLNLADCSNLVS-----LP-- 952

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY-----LS 175
                            ++  L +L  L++S C   E   P ++ +L  L+ LY     LS
Sbjct: 953  ---------------EAICKLKTLKILNVSFCTKLE-RFPENLRSLQCLEGLYASGLNLS 996

Query: 176  KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT------LLG 229
            K+ F ++ A I  L  L  L+L  C+ L  +P+LPP++  + V+ C  L        LLG
Sbjct: 997  KDCFSSILAGIIQLSKLRVLELSHCQGLLQVPELPPSLRVLDVHSCTCLEVLSSPSCLLG 1056

Query: 230  ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPKWFM 288
                +    TI D               S    FL       +   IVVPGS  IPKW  
Sbjct: 1057 VSLFKCFKSTIEDL----------KYKSSSNEVFLRDSDFIGNGVCIVVPGSCGIPKWIR 1106

Query: 289  YQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
             Q EG+ IT+  P      N  +G A C V+
Sbjct: 1107 NQREGNHITMDLPQNCYENNDFLGIAICCVY 1137



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 136/348 (39%), Gaps = 42/348 (12%)

Query: 133  LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY-----LSKNNFVTLPASI 186
            L LP +   L +L  L++S C   E   P ++ +L  L+ LY     LSK+ F ++ A I
Sbjct: 1765 LNLPEAFCNLKTLKILNVSFCTKLE-RFPENLRSLQCLEGLYASGLNLSKDCFSSILAGI 1823

Query: 187  NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
              L  L  L+L  C+ L  +P+ PP++  + V+ C  L TL        SS         
Sbjct: 1824 IQLSKLRVLELSHCQGLLQVPEFPPSLRVLDVHSCTCLETLSSP-----SSQLGFSLFKC 1878

Query: 247  LKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLC 305
             K         SM+ EF E  S  +    +V+ G++ IP+W     +GS IT+   + L 
Sbjct: 1879 FK---------SMIEEF-ECGSYWNKAIRVVISGNDGIPEWISQPKKGSQITIELSTDLY 1928

Query: 306  NMNQVVGYAACRVFHVPKHSTGIR-RFYRYPHPAHVLHCSMDEKFGHR---GSDHLWLLY 361
              +  +G+A   VF +P     +          +   H      +  R    S  + + Y
Sbjct: 1929 RKDGFLGFALYSVF-IPMACGWLNCELNICGDQSECCHVDDVRSYCCRICGESSQMCVTY 1987

Query: 362  LPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEV--EEFD 419
             P+     N  W  E    + SF         +  GT ++VK CGFH  Y  +V      
Sbjct: 1988 YPK-VVIGNQYWSNEWRRLKASFH--------SLDGTPVEVKECGFHLIYTPDVINRNIP 2038

Query: 420  ETTKQWTRFTSYNLNEF---HHDFVGSNMAVAKANGSGCCDDYDEEPQ 464
            E T    R +  N       H   +  N      +     +D +  PQ
Sbjct: 2039 EDTSSDARRSCDNTEATRRDHQTMIEYNDEQRSCDTRSAAEDTNSNPQ 2086


>gi|225460287|ref|XP_002279207.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1554

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 119/228 (52%), Gaps = 34/228 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LREL LD T +KE+P SI+ L GL  L L+ CKNL+ +P NI +L+SL+TL + GC 
Sbjct: 1136 MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 1195

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K   L + +G +  L  L                           C     S SC LP  
Sbjct: 1196 KLNKLPKNLGSLTQLRLL---------------------------CAARLDSMSCQLPSF 1228

Query: 121  INL-------MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
             +L       + RS+ +   +   +S L SL ++DLS C L EG IPS+I  L SL+ LY
Sbjct: 1229 SDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALY 1288

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
            L  N+F ++P+ I  L  L+ L L  C+ LQ +P+LP ++  +  +GC
Sbjct: 1289 LKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLDAHGC 1336



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 154/337 (45%), Gaps = 37/337 (10%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E P S  ++  L  LTL+GC +L RLP +I+ L+ L+TL+   C K E   E    +++L
Sbjct: 658 EFP-SFSMMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNL 716

Query: 76  EELDISGTAI-RCPPSSIFLMKNLKTLSFRGCNG----PPS-----------SASCYLPF 119
           ++LD+ GTAI + P SSI  ++ L+ L+   C      P +           + SC  P 
Sbjct: 717 KKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICLSSLRVLHLNGSCITPR 776

Query: 120 PIN----------LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSL 169
            I           L     ++    L  +  L SL +LDLS+C L +  IP DI  L SL
Sbjct: 777 VIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSL 836

Query: 170 KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLG 229
           + L LS  N   +PASI+ L  L+ L L  CK+LQ   +LP +V  +  +     ++   
Sbjct: 837 QALDLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFLDGHDSFKSLSWQR 896

Query: 230 ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMY 289
            L     +C   +  D     G + +       F           SIV+P   +P W  Y
Sbjct: 897 WLWGFLFNCFKSEIQDVECRGGWHDIQFGQSGFF-------GKGISIVIP--RMPHWISY 947

Query: 290 QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHST 326
           QN G+ I +  P      N  +G+A C V+ VP  +T
Sbjct: 948 QNVGNEIKIELPMDWYEDNDFLGFALCAVY-VPLENT 983


>gi|359493570|ref|XP_002270429.2| PREDICTED: uncharacterized protein LOC100253289 [Vitis vinifera]
          Length = 2663

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 193/430 (44%), Gaps = 56/430 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LR+L L+ T IKE+P SIE L+ L  L L+ CKNLV LP +I +L+ L+ LN+  C 
Sbjct: 1696 MENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCS 1755

Query: 61   KFENLLETVGQVESLEELDISGTAIR-CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K   L + +G+++SL+ L   G   R C   S+  + +LK L                  
Sbjct: 1756 KLHKLPQNLGRLQSLKCLRARGLNSRCCQLLSLSGLCSLKELD----------------- 1798

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                +  S  +  ++L  +  L SL  +DL  CG+ EG IP++I  L SL+ L+L  N F
Sbjct: 1799 ----LIYSKLMQGVVLSDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLFGNLF 1854

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
             ++PA IN L  L  L L +C+ L+ +P LP ++  + ++ C  L T  G L       +
Sbjct: 1855 RSIPAGINQLSRLRLLVLGNCQELRQIPALPSSLRVLDIHLCKRLETSSGLL-----WSS 1909

Query: 240  IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPKWFMYQNEGSSITV 298
            + +   SL         I  L   +  +  P  + ++++  S  IP W  +  +G+ +  
Sbjct: 1910 LFNCFKSL---------IQDLECKIYPLEKPFARVNLIISESCGIPDWISHHKKGAEVVA 1960

Query: 299  TRPSYLCNMNQVVGYAA-CRVFHVPKHSTGI----RRFYRYPHPAHVLHCSMDEKFGHRG 353
              P      + ++G+   C  + +   S         ++ Y            +K     
Sbjct: 1961 KLPQNWYKNDDLLGFVLYCVYYPLDNESEETLENGATYFEYGLTLRGHEIQFVDKLQFYP 2020

Query: 354  SDH------LWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
            S H      +W++Y P+      ++  + SN +R          C    G  +KV+ CG 
Sbjct: 2021 SFHVYVVPCMWMIYYPKHE----IEEKYHSNKWR----QLTASFCGYLRGKAVKVEECGI 2072

Query: 408  HPGYMHEVEE 417
            H  Y H+ E+
Sbjct: 2073 HLIYAHDHEQ 2082



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 172/368 (46%), Gaps = 74/368 (20%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LR+L L+ T IKE+P SIE L+ L  L L  CKNLV LP +I +L+ L+ LN+  C 
Sbjct: 1138 MENLRQLHLNGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCS 1197

Query: 61   KFENLLETVGQVESLEELDISGTAIRC-PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K   L + +G+++SL+ L   G   RC    S+  + +LK L                  
Sbjct: 1198 KLHKLPQNLGRLQSLKRLRARGLNSRCCQLLSLSGLCSLKELD----------------- 1240

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                +  S  +  ++L  +  L S+  LDLS CG+ EG IP++I  L SL+ L L  N F
Sbjct: 1241 ----LIYSKLMQGVVLSDICCLYSVEVLDLSFCGIDEGGIPTEICQLSSLQELLLIGNLF 1296

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL------KL 233
             ++PA IN L  L  L L +C+ L+ +P LP  ++ + +  C++LV+L  A+      KL
Sbjct: 1297 RSIPAGINQLSRLRLLVLSNCQELRQIPVLPSRLQHLNLADCSNLVSLPEAICIIQLSKL 1356

Query: 234  R------------------------KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA 269
            R                          SCT ++ + S   L    L +S+ + F   +  
Sbjct: 1357 RVLELSHCQGLLQVPELPPSLRVLDVHSCTCLEVLSSPSCL----LGVSLFKCFKSTIED 1412

Query: 270  PSHKFS-----------------IVVPGS-EIPKWFMYQNEGSSITVTRPSYLCNMNQVV 311
              +K S                 IVVPGS  IPKW   Q EG+ IT+  P      N  +
Sbjct: 1413 LKYKSSSNEVFLRDSDFIGNGVCIVVPGSCGIPKWIRNQREGNHITMDLPQNCYENNDFL 1472

Query: 312  GYAACRVF 319
            G A C V+
Sbjct: 1473 GIAICCVY 1480



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 14/145 (9%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L LD T IKE+P SIELL GL  L L  CKNL  LP++I +L+ L+ L+L GC K +
Sbjct: 698 LERLSLDNTAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLD 757

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSS------------IFLMKNLKTLSFRGCNGPPS 111
            L E + ++  LE L ++  + + P  S            I  + NL+ L    C     
Sbjct: 758 RLPEDLERMPCLEVLSLNSLSCQLPSLSEEGGTLSDMLVGISQLSNLRALDLSHCKKVSQ 817

Query: 112 SASCYLPFPINLMRRSSDLGALMLP 136
                LP  + L+   S +G  + P
Sbjct: 818 IPE--LPSSLRLLDMHSSIGTSLPP 840



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 70/339 (20%)

Query: 3   CLREL----LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG 58
           CLR L    L D   + E+P +   +  L +L L GC  L+++ ++I          + G
Sbjct: 632 CLRNLRYINLNDSQQLIELP-NFSNVPNLEELNLSGCIILLKVHTHIR---------VFG 681

Query: 59  CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC 115
           C +  +  +    +  LE L +  TAI+  PSSI L++ L+ L    C    G P+S  C
Sbjct: 682 CSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSI-C 740

Query: 116 YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            L F             L + SL G   L +L            P D+  +  L+ L L+
Sbjct: 741 NLRF-------------LEVLSLEGCSKLDRL------------PEDLERMPCLEVLSLN 775

Query: 176 K------------NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC-- 221
                             +   I+ L NL  L L  CK++  +P+LP ++  + ++    
Sbjct: 776 SLSCQLPSLSEEGGTLSDMLVGISQLSNLRALDLSHCKKVSQIPELPSSLRLLDMHSSIG 835

Query: 222 ASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS 281
            SL  +   +   KS+   + +  S  ++            FL       H   IVVPGS
Sbjct: 836 TSLPPMHSLVNCLKSASEDLKYKSSSNVV------------FLSDSYFIGHGICIVVPGS 883

Query: 282 -EIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
             IP W   Q + + IT+  P      N  +G A C V+
Sbjct: 884 CGIPNWIRNQRKENRITMDLPRNCYENNDFLGIAICCVY 922



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 2/103 (1%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+L L    I  +P  IE  S    L L+ CKNL  LP++I   KSLK+L    C + + 
Sbjct: 2529 RKLCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQY 2586

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
              E +  +E+L EL ++GTAI+  PSSI  +  L+ L+   C 
Sbjct: 2587 FPEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQ 2629



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 37/56 (66%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL 56
            ME LREL L+ T IKE+P SIE L+ L  L L  C+NLV LP +  +L  L+ LN+
Sbjct: 2594 MENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVLNV 2649



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 272  HKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            H   IVVPGS  IPKW   Q EG  IT+  P      N  +G A C V+
Sbjct: 2329 HGICIVVPGSSGIPKWIRKQREGYQITMDLPQSCYENNDFLGIAICCVY 2377


>gi|297740941|emb|CBI31253.3| unnamed protein product [Vitis vinifera]
          Length = 1426

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 153/330 (46%), Gaps = 35/330 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  LR L L  T IK +P SI   +GL  LTL+ C+NL  LP +I  LKSLK L ++GC 
Sbjct: 1032 MGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLP-DICGLKSLKGLFIIGCS 1090

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
              E   E    +E L+ L +  T I   PSSI  ++ L +L    C      P S     
Sbjct: 1091 NLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNLVALPISIGSLT 1150

Query: 118  PFPINLMRRSSDLGALMLPSLSGLGS-LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
               I  +R  + L  L   +L GL   L KLDL  C L EG IPSD+  L SL++LY+S+
Sbjct: 1151 CLTILRVRNCTKLHNLP-DNLRGLRRRLIKLDLGGCNLMEGEIPSDLWCLSSLESLYVSE 1209

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
            N+   +PA I  LF L+ L +  C  L+ + +LP ++  +   GC  L T   +      
Sbjct: 1210 NHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYMEARGCPCLETETFS------ 1263

Query: 237  SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAP---SHKFSIVVPGSE-IPKWFMYQNE 292
                            + L  S+L+ F   + +      +F  V+PGS  IP+W  +Q  
Sbjct: 1264 ----------------SPLWSSLLKYFKSAIQSTFFGPRRF--VIPGSSGIPEWVSHQRI 1305

Query: 293  GSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
            G  + +  P      N  +G+      HVP
Sbjct: 1306 GCEVRIELPMNWYEDNNFLGFVLF-FHHVP 1334



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 27/243 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK----------NLVR---------- 40
            M+CL+ L LD+T IKE+P SI  L+ L  L+L+ C           N+ R          
Sbjct: 797  MKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESG 856

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LP +I  L+ L  L+L  C KFE   E  G ++ L+ L +  TAI+  P+SI  + +
Sbjct: 857  IKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTS 916

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
            L+ LS R C+     +  +       +    + G   LP S+  L SL +LDLS+C   E
Sbjct: 917  LEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFE 976

Query: 157  GAIPSDIG-NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
                S+I  N+  L+ LYL       LP SI CL +LE L L+ C  L+ LP++  ++  
Sbjct: 977  KF--SEIQWNMKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLERLPEIQKDMGN 1034

Query: 216  VRV 218
            +R 
Sbjct: 1035 LRA 1037



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 3/206 (1%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K++P  +  +  L +L L G   +  LP +I  L+SL+ L+L  C KFE   E  G ++
Sbjct: 740 LKKIPKILGNMGHLKKLCLNG-SGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNMK 798

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L+ L +  TAI+  P+SI  + +L+ LS R C+     +  +      L+    + G  
Sbjct: 799 CLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESGIK 858

Query: 134 MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP S+  L  L +LDLS C   E   P   GN+  LK L L +     LP SI  + +L
Sbjct: 859 ELPGSIGCLEFLLQLDLSYCSKFE-KFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTSL 917

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRV 218
           E L L  C + +    +  N+  +++
Sbjct: 918 EILSLRKCSKFEKFSDVFTNMRHLQI 943



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 41/226 (18%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------FKFENLL-------- 66
           +  L +L L+GC +L  L S+I  LK L  LNL GC          KFE+L         
Sbjct: 679 MPNLERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCR 738

Query: 67  ------ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                 + +G +  L++L ++G+ I+  P SI  +++L+ L    C       S +  FP
Sbjct: 739 KLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNC-------SKFEKFP 791

Query: 121 ------INLMRRSSDLGALM-LP-SLSGLGSLTKLDLSDCGLGEGAIPSDI-GNLHSLKT 171
                   L R S D  A+  LP S+  L SL  L L  C   E    SD+  N+  L  
Sbjct: 792 EIRGNMKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKF--SDVFTNMRRLLI 849

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           L L ++    LP SI CL  L +L L  C + +  P++  N+++++
Sbjct: 850 LNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLK 895



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 71  QVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++E L+ +D+S +           M NL+ L+  GC     ++ C L   I  +++ + L
Sbjct: 655 RLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGC-----TSLCELHSSIGDLKQLTYL 709

Query: 131 ---GALML---PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              G   L   P+     SL  L L+ C      IP  +GN+  LK L L+ +    LP 
Sbjct: 710 NLRGCEQLQSFPTNMKFESLEVLCLNQCR-KLKKIPKILGNMGHLKKLCLNGSGIKELPD 768

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           SI  L +LE L L +C + +  P++  N++
Sbjct: 769 SIGYLESLEILDLSNCSKFEKFPEIRGNMK 798


>gi|147821370|emb|CAN67940.1| hypothetical protein VITISV_013693 [Vitis vinifera]
          Length = 1386

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 184/470 (39%), Gaps = 85/470 (18%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L LD+T I+ +P S+  L+ L  L L  CKNL  LP++I  LKSL+ L+L GC 
Sbjct: 941  MGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCS 1000

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E   E    +E LE L +  T I   PSSI  ++ LK+L    C    +     LP  
Sbjct: 1001 NLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLKSLELINCENLVA-----LPNS 1055

Query: 121  INLMRRSSDLGALMLPSLSGLGS--------LTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            I  +   + L     P L  L          LT LDL  C L E  IPSD+  L  L  L
Sbjct: 1056 IGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFL 1115

Query: 173  YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
             +S+N    +PA I  L  L  L +  C  L+ + +LP ++  +  +GC SL T      
Sbjct: 1116 NISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWIEAHGCPSLET------ 1169

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQN 291
                               +   ++        + S    KF+I++PGS  IP+W  +Q 
Sbjct: 1170 -------------------ETSSSLLWSSLLKHLKSPIQQKFNIIIPGSSGIPEWVSHQR 1210

Query: 292  EGSSITVTRPSYLCNMNQVVGYAACRVFHVP--KHSTGIRRFYRYPHPAHVL-------- 341
             G  ++V  P      N ++G+      HVP       +R     PH    +        
Sbjct: 1211 MGCEVSVELPMNWYEDNNLLGFVLF-FHHVPLDDDDECVRTSGFIPHCKLAISHGDQSKR 1269

Query: 342  --------HC-----------SMDEKFGHRGSDHLWLLYLP--------RQSYYCNVKWH 374
                    HC           S     G      LW+ Y P        R   + N K H
Sbjct: 1270 LDDIGFHPHCKTYSISGLSYGSTRYDSGSTSDPALWVTYFPQIGIPSKYRSRKWNNFKAH 1329

Query: 375  FESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
            F++     SF          G     KVK CG H  Y  + + + + +++
Sbjct: 1330 FDNPVGNASFT--------CGENASFKVKSCGIHLIYAQDQKHWPQPSRK 1371



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 18/223 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           MECL+EL L+++ I+E+P SI  L+ L  L L  C N  + P    ++K L+ L L GC 
Sbjct: 682 MECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEGCP 741

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           KFEN  +T   +  L  L +  + I+  PSSI  +++L+ L    C       S +  FP
Sbjct: 742 KFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISCC-------SKFEKFP 794

Query: 121 ---------INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                     NL  R + +  L   S+  L SL  L L  C L          N+  L+ 
Sbjct: 795 EIQGNMKCLKNLYLRXTAIQELP-NSIGSLTSLEILSLEKC-LKFEKFSDVFTNMGRLRE 852

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           L L ++    LP SI  L +LE L L  C   +  P++  N++
Sbjct: 853 LCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMK 895



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 114/270 (42%), Gaps = 58/270 (21%)

Query: 2   ECLREL----LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLL 57
           +CL EL    L +   + +MP     +  L +L L+GC +L  L S+I  LKSL  LNL 
Sbjct: 586 KCLEELKGIDLSNSKQLVKMP-KFSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLA 644

Query: 58  GC---------FKFENLL--------------ETVGQVESLEELDISGTAIRCPPSSIFL 94
           GC          KFE+L               E  G +E L+EL ++ + I+  PSSI  
Sbjct: 645 GCEQLRSFPSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVY 704

Query: 95  MKNLKTLSFRGCN---------------------GPPS-----SASCYLPFPINLMRRSS 128
           + +L+ L+   C+                     G P          Y+     L  R S
Sbjct: 705 LASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKS 764

Query: 129 DLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             G   LPS  G L SL  LD+S C   E   P   GN+  LK LYL       LP SI 
Sbjct: 765 --GIKELPSSIGYLESLEILDISCCSKFE-KFPEIQGNMKCLKNLYLRXTAIQELPNSIG 821

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            L +LE L LE C + +    +  N+ ++R
Sbjct: 822 SLTSLEILSLEKCLKFEKFSDVFTNMGRLR 851



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 66/264 (25%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L E+ L  ++IK++    + L  L  + L   K LV++P   +S+ +L+ LNL GC    
Sbjct: 568 LIEINLKSSNIKQLWKGNKCLEELKGIDLSNSKQLVKMPK-FSSMPNLERLNLEGCTSLC 626

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            L  ++G ++SL  L+++G   +R  PSS+   ++L+ L    C                
Sbjct: 627 ELHSSIGDLKSLTYLNLAGCEQLRSFPSSM-KFESLEVLYLNCC---------------- 669

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                        P+L                     P   GN+  LK LYL+++    L
Sbjct: 670 -------------PNLK------------------KFPEIHGNMECLKELYLNESGIQEL 698

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASL------VTLLGALK- 232
           P+SI  L +LE L L +C   +  P +  N++ +R   + GC          T +G L+ 
Sbjct: 699 PSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEGCPKFENFPDTFTYMGHLRR 758

Query: 233 --LRKSSC----TIIDFVDSLKLL 250
             LRKS      + I +++SL++L
Sbjct: 759 LHLRKSGIKELPSSIGYLESLEIL 782


>gi|359493398|ref|XP_003634586.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 184/470 (39%), Gaps = 85/470 (18%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L LD+T I+ +P S+  L+ L  L L  CKNL  LP++I  LKSL+ L+L GC 
Sbjct: 882  MGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCS 941

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E   E    +E LE L +  T I   PSSI  ++ LK+L    C    +     LP  
Sbjct: 942  NLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLKSLELINCENLVA-----LPNS 996

Query: 121  INLMRRSSDLGALMLPSLSGLGS--------LTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            I  +   + L     P L  L          LT LDL  C L E  IPSD+  L  L  L
Sbjct: 997  IGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFL 1056

Query: 173  YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
             +S+N    +PA I  L  L  L +  C  L+ + +LP ++  +  +GC SL T      
Sbjct: 1057 NISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWIEAHGCPSLET------ 1110

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQN 291
                               +   ++        + S    KF+I++PGS  IP+W  +Q 
Sbjct: 1111 -------------------ETSSSLLWSSLLKHLKSPIQQKFNIIIPGSSGIPEWVSHQR 1151

Query: 292  EGSSITVTRPSYLCNMNQVVGYAACRVFHVP--KHSTGIRRFYRYPHPAHVL-------- 341
             G  ++V  P      N ++G+      HVP       +R     PH    +        
Sbjct: 1152 MGCEVSVELPMNWYEDNNLLGFVLF-FHHVPLDDDDECVRTSGFIPHCKLAISHGDQSKR 1210

Query: 342  --------HC-----------SMDEKFGHRGSDHLWLLYLP--------RQSYYCNVKWH 374
                    HC           S     G      LW+ Y P        R   + N K H
Sbjct: 1211 LDDIGFHPHCKTYSISGLSYGSTRYDSGSTSDPALWVTYFPQIGIPSKYRSRKWNNFKAH 1270

Query: 375  FESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
            F++     SF          G     KVK CG H  Y  + + + + +++
Sbjct: 1271 FDNPVGNASFT--------CGENASFKVKSCGIHLIYAQDQKHWPQPSRK 1312



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 18/223 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           MECL+EL L+++ I+E+P SI  L+ L  L L  C N  + P    ++K L+ L L GC 
Sbjct: 623 MECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIHGNMKFLRELYLEGCP 682

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           KFEN  +T   +  L  L +  + I+  PSSI  +++L+ L    C       S +  FP
Sbjct: 683 KFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISCC-------SKFEKFP 735

Query: 121 ---------INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                     NL  R + +  L   S+  L SL  L L  C L          N+  L+ 
Sbjct: 736 EIQGNMKCLKNLYLRKTAIQELP-NSIGSLTSLEILSLEKC-LKFEKFSDVFTNMGRLRE 793

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           L L ++    LP SI  L +LE L L  C   +  P++  N++
Sbjct: 794 LCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMK 836



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 115/270 (42%), Gaps = 58/270 (21%)

Query: 2   ECLREL----LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLL 57
           ECL EL    L +   + +MP     +  L +L L+GC +L  L S+I  LKSL  LNL 
Sbjct: 527 ECLEELKGIDLSNSKQLVKMP-KFSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLA 585

Query: 58  GC---------FKFENLL--------------ETVGQVESLEELDISGTAIRCPPSSIFL 94
           GC          KFE+L               E  G +E L+EL ++ + I+  PSSI  
Sbjct: 586 GCEQLRSFPSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVY 645

Query: 95  MKNLKTLSFRGCN---------------------GPPS-----SASCYLPFPINLMRRSS 128
           + +L+ L+   C+                     G P          Y+     L  R S
Sbjct: 646 LASLEVLNLSNCSNFEKFPKIHGNMKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKS 705

Query: 129 DLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             G   LPS  G L SL  LD+S C   E   P   GN+  LK LYL K     LP SI 
Sbjct: 706 --GIKELPSSIGYLESLEILDISCCSKFE-KFPEIQGNMKCLKNLYLRKTAIQELPNSIG 762

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            L +LE L LE C + +    +  N+ ++R
Sbjct: 763 SLTSLEILSLEKCLKFEKFSDVFTNMGRLR 792



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 66/265 (24%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           C    L D  DI +     E L  L  + L   K LV++P   +S+ +L+ LNL GC   
Sbjct: 508 CKWSRLWDVDDIYDAFSRQECLEELKGIDLSNSKQLVKMPK-FSSMPNLERLNLEGCTSL 566

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L  ++G ++SL  L+++G   +R  PSS+   ++L+ L    C               
Sbjct: 567 CELHSSIGDLKSLTYLNLAGCEQLRSFPSSM-KFESLEVLYLNCC--------------- 610

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                         P+L                     P   GN+  LK LYL+++    
Sbjct: 611 --------------PNLK------------------KFPEIHGNMECLKELYLNESGIQE 638

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASL------VTLLGALK 232
           LP+SI  L +LE L L +C   +  P++  N++ +R   + GC          T +G L+
Sbjct: 639 LPSSIVYLASLEVLNLSNCSNFEKFPKIHGNMKFLRELYLEGCPKFENFPDTFTYMGHLR 698

Query: 233 ---LRKSSC----TIIDFVDSLKLL 250
              LRKS      + I +++SL++L
Sbjct: 699 RLHLRKSGIKELPSSIGYLESLEIL 723


>gi|147789262|emb|CAN62576.1| hypothetical protein VITISV_038321 [Vitis vinifera]
          Length = 1256

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 119/228 (52%), Gaps = 34/228 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LREL LD T +KE+P SI+ L GL  L L+ CKNL+ +P NI +L+SL+TL + GC 
Sbjct: 901  MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 960

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K   L + +G +  L  L                           C     S SC LP  
Sbjct: 961  KLNKLPKNLGSLTQLRLL---------------------------CAARLDSMSCQLPSF 993

Query: 121  INL-------MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
             +L       + RS+ +   +   +S L SL ++DLS C L EG IPS+I  L SL+ LY
Sbjct: 994  SDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALY 1053

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
            L  N+F ++P+ I  L  L+ L L  C+ LQ +P+LP ++  +  +GC
Sbjct: 1054 LKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLDAHGC 1101



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 147/320 (45%), Gaps = 20/320 (6%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE-----NLLET 68
           + E P S  ++  L  LTL+GC +L RLP +I+ L+ L+TL+   C K E      L+E+
Sbjct: 412 LMEFP-SFSMMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKLMES 470

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           +  ++ LEEL +    + C   ++  + +L+ L   G    P     +    +      S
Sbjct: 471 LESLQCLEELYLGW--LNCELPTLSGLSSLRVLHLNGSCITPRVIRSHEFLSLLEELSLS 528

Query: 129 DLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
           D   +   L  +  L SL +LDLS+C L +  IP DI  L SL+ L LS  N   +PASI
Sbjct: 529 DCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNIHKMPASI 588

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
           + L  L+ L L  CK+LQ   +LP +V  +  +     ++    L     +C   +  D 
Sbjct: 589 HHLSKLKFLWLGHCKQLQGSLKLPSSVRFLDGHDSFKSLSWQRWLWGFLFNCFKSEIQDV 648

Query: 247 LKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCN 306
               G + +       F           SIV+P   +P W  YQN G+ I +  P     
Sbjct: 649 ECRGGWHDIQFGQSGFF-------GKGISIVIP--RMPHWISYQNVGNEIKIELPMDWYE 699

Query: 307 MNQVVGYAACRVFHVPKHST 326
            N  +G+A C V+ VP  +T
Sbjct: 700 DNDFLGFALCAVY-VPLENT 718


>gi|124360483|gb|ABN08493.1| Leucine-rich repeat, typical subtype [Medicago truncatula]
          Length = 445

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 34/288 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L L+   I+ +P S+  L GL  L LK CK+LV LP  I+ L SL  LN+ GC 
Sbjct: 87  MENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTIHRLNSLIILNISGCS 146

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + + +++ L+EL  + TAI   PSSIF + NLK  S +   G          FP
Sbjct: 147 RLCRLPDGLKEIKCLKELHANDTAIDELPSSIFYLDNLKIGSQQASTG--------FRFP 198

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                           SL  L SL  ++LS C L E +IP  + +L SLK+L L+ NNFV
Sbjct: 199 T---------------SLWNLPSLRYINLSYCNLSEESIPDYLRHLSSLKSLDLTGNNFV 243

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS-CT 239
            +P++I+ L  L  L L  C++LQ LP++  ++ ++  + C SL T     K   +  C+
Sbjct: 244 YIPSTISKLPKLHFLYLNCCQKLQLLPEISSSMTELDASNCDSLET----TKFNPAKPCS 299

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
           +      L  + K       +  F+E +  PS +F +++PG E P  +
Sbjct: 300 VFASPRQLSYVEKK------INSFIEGLCLPSARFDMLIPGKETPSCY 341


>gi|317415954|emb|CAR94519.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 1625

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 42/333 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNI-NSLKSLKTLNLLGC 59
            M+ LR+L +D T I+E+P SI  L+GL  L L+ CK+L+ LP  I  SL SL+ LN+ GC
Sbjct: 706  MKQLRKLHVDGTAIEELPTSINHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGC 765

Query: 60   FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
                 L E +G +E L+EL  S T I+  P+S   + +L  L+ R C             
Sbjct: 766  SNLNELPENLGSLECLQELYASRTPIQVLPTSSKHLTDLTLLNLRECKN----------- 814

Query: 120  PINLMRRSSDLGALMLPSL--SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                         L LP +  + L SL  L+LS C      +P ++G+L SL+ LY S  
Sbjct: 815  ------------LLTLPDVICTNLTSLQILNLSGCS-NLNELPENLGSLESLQELYASGT 861

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA----LKL 233
                +P SI+ L  LE+L  + C +LQSLP+LP ++  V V+ C     L GA    + +
Sbjct: 862  AISQVPESISQLSQLEELVFDGCSKLQSLPRLPFSIRAVSVHNCP---LLQGADSNKITV 918

Query: 234  RKSSCTIIDFVDSLK--------LLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
              S+     F++  +         L    L     + F E       +F      +EIP 
Sbjct: 919  WPSAAAGFSFLNRQRHDDIAQAFWLPDKHLLWPFYQTFFEGAIRRDERFEYGYRSNEIPA 978

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            W   ++  S+IT+  P  +    + +  A C +
Sbjct: 979  WLSRRSTESTITIPLPHDVDGKTKWIKLALCFI 1011



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 29/163 (17%)

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPA 338
            P S   +WF +Q+  SS T+  P  L   +  +G A C  F V +H T        P  +
Sbjct: 1460 PSSITLEWFGHQSNDSSATILLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAIS 1519

Query: 339  HVLHCSMDEKFGHRGSDH-----------------LWLLYLPRQSYYCNVKWHFESNHFR 381
            H L C+++ +     S H                 +W+ Y+PR  +   +    E +   
Sbjct: 1520 HHLICNLESERDSLESLHDYCTTKEEFLWLHLGGFVWVSYIPRAWFSDQLN---ECSVLE 1576

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
             S   + E            V++CG    Y H+ EEF +T  +
Sbjct: 1577 ASIASDHE---------AFSVQKCGLRLVYQHDEEEFKQTISR 1610


>gi|296089437|emb|CBI39256.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 119/228 (52%), Gaps = 34/228 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LREL LD T +KE+P SI+ L GL  L L+ CKNL+ +P NI +L+SL+TL + GC 
Sbjct: 1068 MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 1127

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K   L + +G +  L  L                           C     S SC LP  
Sbjct: 1128 KLNKLPKNLGSLTQLRLL---------------------------CAARLDSMSCQLPSF 1160

Query: 121  INL-------MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
             +L       + RS+ +   +   +S L SL ++DLS C L EG IPS+I  L SL+ LY
Sbjct: 1161 SDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALY 1220

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
            L  N+F ++P+ I  L  L+ L L  C+ LQ +P+LP ++  +  +GC
Sbjct: 1221 LKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLDAHGC 1268



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 156/329 (47%), Gaps = 15/329 (4%)

Query: 1   MECLRELLLDKTDIKEMPLS-IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M+ L++L L  T I+++P S IE L GL  L L  CKNLV LP NI SL+ LK LN+  C
Sbjct: 569 MKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICSLRFLKFLNVNAC 628

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K   L+E++  ++ LEEL +    + C   ++  + +L+ L   G    P     +   
Sbjct: 629 SKLHRLMESLESLQCLEELYLGW--LNCELPTLSGLSSLRVLHLNGSCITPRVIRSHEFL 686

Query: 120 PINLMRRSSDLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
            +      SD   +   L  +  L SL +LDLS+C L +  IP DI  L SL+ L LS  
Sbjct: 687 SLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSGT 746

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
           N   +PASI+ L  L+ L L  CK+LQ   +LP +V  +  +     ++    L     +
Sbjct: 747 NIHKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFLDGHDSFKSLSWQRWLWGFLFN 806

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
           C   +  D     G + +       F           SIV+P   +P W  YQN G+ I 
Sbjct: 807 CFKSEIQDVECRGGWHDIQFGQSGFF-------GKGISIVIP--RMPHWISYQNVGNEIK 857

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHST 326
           +  P      N  +G+A C V+ VP  +T
Sbjct: 858 IELPMDWYEDNDFLGFALCAVY-VPLENT 885


>gi|298205191|emb|CBI17250.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 129/237 (54%), Gaps = 18/237 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME ++E L  +T IKE+P S+E L  +  L L   KNL  L S+I   KS + L L GC 
Sbjct: 43  MEDMKEFLDSRTGIKELPSSMEHLLNINSLFLSDFKNLRSLLSSIRRFKSFRRLFLNGCS 102

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              N  E +  ++ LE L + GTAI+  PSSI  +K+L+ L    C    +     +P  
Sbjct: 103 SLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVT-----IPDS 157

Query: 121 INLMRRSSDLGALMLP----------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           IN +R    L  L+LP          +L GL +L +LDLS C L EG+IP+DI  L+SL 
Sbjct: 158 INDLRC---LKRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLC 214

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           TL LS N+ V++P+ I  L  L  L +  CK LQ +P+L  ++ ++  +GC  L  L
Sbjct: 215 TLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAHGCTKLEML 271


>gi|357500597|ref|XP_003620587.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|357500703|ref|XP_003620640.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495602|gb|AES76805.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495655|gb|AES76858.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1094

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 189/437 (43%), Gaps = 78/437 (17%)

Query: 13   DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-FENLLETVGQ 71
            ++ E+  SI LL  LV L L  CKNLV +P+NI SL SL+ LN+ GC K F+N +     
Sbjct: 660  NLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYGCSKVFKNPMHLK-- 717

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
                ++ DIS +A      S                        ++  P +L   +    
Sbjct: 718  ----KKHDISESASHSRSMSSVFK--------------------WIMLPHHLRFSAPTRH 753

Query: 132  ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
              +LPSL  L  L  +D+S C L +  +P  I  L+SL+ L L  NNFVTLP S+  L  
Sbjct: 754  TYLLPSLHSLVCLRDVDISFCHLSQ--VPDAIECLYSLERLNLEGNNFVTLP-SLRKLSK 810

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLG 251
            L  L L+ C  L+SLPQLP     +R N     +   G             F+ +   LG
Sbjct: 811  LVYLNLQHCMLLESLPQLPSPTNIIRENNKYFWIWPTGL------------FIFNCPKLG 858

Query: 252  K----NGLAISMLREFLEV--VSAPS--HKFSIVVPGSEIPKWFMYQNEGSSITVTR-PS 302
            +    + +  S L +F+E    S P+      IV PG+EIP W   ++ G SI + R P 
Sbjct: 859  ERERCSSMTFSWLTQFIEANSQSYPTSFDWIQIVTPGNEIPIWINNKSVGDSIQIDRSPI 918

Query: 303  YLCNMNQVVGYAACRVFHVP---------KHSTGIRRFYRYPHPAHVLHCSMDEKFGHRG 353
               N N ++G+  C VF +          +  T  +        A V+   ++       
Sbjct: 919  MHDNNNYIIGFLCCAVFSMAPDCWMFPFAQEWTDKKLIRMSCRSATVI---LNGGLVMTK 975

Query: 354  SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMH 413
            S HLW++Y PR+SY       FE  HF +            G    L+VK CG+      
Sbjct: 976  SSHLWIIYFPRESYS-----EFEKIHFNIF----------EGEDFSLEVKSCGYRWVCKE 1020

Query: 414  EVEEFDETTKQWTRFTS 430
            +++EF+ T      F +
Sbjct: 1021 DLQEFNLTMMNQENFLA 1037


>gi|10178211|dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana]
          Length = 1130

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 169/391 (43%), Gaps = 58/391 (14%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
            LV L L  C  L  LP  I  LKSL++L L  C K E L + +G++ESL  L    TA+R
Sbjct: 675  LVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALR 734

Query: 87   CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLT 145
              PS+I  +K LK LS  GC G  S          NL    S   +L+ P SLSGL  + 
Sbjct: 735  EIPSTINQLKKLKRLSLNGCKGLLSDD------IDNLYSEKSHSVSLLRPVSLSGLTYMR 788

Query: 146  KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
             L L  C L +  IP DIG+L  L+ L L  N+F  LP     L NL +L L DC +LQS
Sbjct: 789  ILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQS 848

Query: 206  LPQLP-----------------PNVE------KVRVNGCASLVTLLGALKLRKSSCTIID 242
            +  LP                 P++       K+++N C SL  + G       S  ++ 
Sbjct: 849  ILSLPRSLLFLDVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVL- 907

Query: 243  FVDSLKLLGKNGLAISMLREFL----EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
              D  KL   +    +ML  +L    E +  P  + ++      IP W  ++ E  S ++
Sbjct: 908  --DGCKLASTDTTINTMLENWLKRNHECIYIPVDRPNV------IPNWVYFEEEKRSFSI 959

Query: 299  TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLW 358
            T P    N + VVG+     F  P   + I     YP    V + +       RGS   W
Sbjct: 960  TVPE-TDNSDTVVGFTLWMNFVCPMGYSSI-----YPRAIIVRNLT-------RGS--AW 1004

Query: 359  LLYLPRQSYYCNVKWHFESNHFRLSFMDERE 389
            +  L        +  +  +N F +   DE E
Sbjct: 1005 IHSLKNSKIRIQMNANLLTNDFHIVTGDEIE 1035


>gi|224154407|ref|XP_002337473.1| predicted protein [Populus trichocarpa]
 gi|222839424|gb|EEE77761.1| predicted protein [Populus trichocarpa]
          Length = 187

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/160 (50%), Positives = 100/160 (62%), Gaps = 3/160 (1%)

Query: 66  LETVGQVESLEELDISGTAIR-CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           LE +G  ESLEELDISGTAIR  PPSS  L++ LK LS RGC G        + F  +  
Sbjct: 21  LEELGHAESLEELDISGTAIRRQPPSSFSLVRKLKKLSLRGCKGQL--LKTRMMFLSSFR 78

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
            + ++  +L L S SGL S   LDLS+C L E +IP D   L SL  L +S NNF +LPA
Sbjct: 79  EKRTNSLSLSLNSFSGLCSFIALDLSNCNLQEESIPGDFSCLTSLSVLNVSGNNFTSLPA 138

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           +I+ L NLE L L+DCKRLQSL +LP N++ V    C SL
Sbjct: 139 TIHELSNLEYLYLDDCKRLQSLGELPSNLKFVSAQACTSL 178


>gi|186527047|ref|NP_001119319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006746|gb|AED94129.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1191

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 169/391 (43%), Gaps = 58/391 (14%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
            LV L L  C  L  LP  I  LKSL++L L  C K E L + +G++ESL  L    TA+R
Sbjct: 673  LVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALR 732

Query: 87   CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLT 145
              PS+I  +K LK LS  GC G  S          NL    S   +L+ P SLSGL  + 
Sbjct: 733  EIPSTINQLKKLKRLSLNGCKGLLSDD------IDNLYSEKSHSVSLLRPVSLSGLTYMR 786

Query: 146  KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
             L L  C L +  IP DIG+L  L+ L L  N+F  LP     L NL +L L DC +LQS
Sbjct: 787  ILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQS 846

Query: 206  LPQLP-----------------PNVE------KVRVNGCASLVTLLGALKLRKSSCTIID 242
            +  LP                 P++       K+++N C SL  + G       S  ++ 
Sbjct: 847  ILSLPRSLLFLDVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVL- 905

Query: 243  FVDSLKLLGKNGLAISMLREFL----EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
              D  KL   +    +ML  +L    E +  P  + ++      IP W  ++ E  S ++
Sbjct: 906  --DGCKLASTDTTINTMLENWLKRNHECIYIPVDRPNV------IPNWVYFEEEKRSFSI 957

Query: 299  TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLW 358
            T P    N + VVG+     F  P   + I     YP    V + +       RGS   W
Sbjct: 958  TVPE-TDNSDTVVGFTLWMNFVCPMGYSSI-----YPRAIIVRNLT-------RGS--AW 1002

Query: 359  LLYLPRQSYYCNVKWHFESNHFRLSFMDERE 389
            +  L        +  +  +N F +   DE E
Sbjct: 1003 IHSLKNSKIRIQMNANLLTNDFHIVTGDEIE 1033


>gi|297741884|emb|CBI33319.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 130/259 (50%), Gaps = 29/259 (11%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R+     +D+ E+P+ I+  S L  L L+ C+NL  LPS+I   KSL TL+  GC + E+
Sbjct: 419 RKCCFKGSDMNEVPI-IKNPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLES 477

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS--------- 111
             E +  +ESL +L ++GTAI+  PSSI  ++ L+ L  R C    N P S         
Sbjct: 478 FPEILQDMESLRKLYLNGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKT 537

Query: 112 ----SASCYLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
               S   +   P NL R  S         D     LPSLSGL SL  L L  C L E  
Sbjct: 538 LVVESCPNFKKLPDNLGRLQSLLHLSVGHLDSMNFQLPSLSGLCSLRTLRLKGCNLRE-- 595

Query: 159 IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            PS+I  L SL TL L  N+F  +P  I+ L+NLE L L  CK LQ +P+LP  +  +  
Sbjct: 596 FPSEIYYLSSLVTLSLRGNHFSRIPDGISQLYNLEHLDLGHCKMLQHIPELPSGLRCLDA 655

Query: 219 NGCASLVTLLGALKLRKSS 237
           + C SL  L     L  SS
Sbjct: 656 HHCTSLENLSSQSNLLWSS 674



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 14/162 (8%)

Query: 159 IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           IPS I  L SL+ L L   +F ++P +IN L  L+ L L  C  L+ +P+LP  ++ +  
Sbjct: 94  IPSHICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPELPSRLQLLDA 153

Query: 219 NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVV 278
           +G     +    L L          V+            S L  F +  S       I +
Sbjct: 154 HGSNHTSSRAPFLPLH-------SLVNCFSWAQD-----SQLTSFSD-SSYHGKGTCIFL 200

Query: 279 PGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
           PGS+ IP+W M +          P      N+ +G+A C V+
Sbjct: 201 PGSDGIPEWIMGRTNRHFTRTELPQNWHQNNEFLGFAICCVY 242


>gi|30692996|ref|NP_198509.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006745|gb|AED94128.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 169/391 (43%), Gaps = 58/391 (14%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
            LV L L  C  L  LP  I  LKSL++L L  C K E L + +G++ESL  L    TA+R
Sbjct: 670  LVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALR 729

Query: 87   CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLT 145
              PS+I  +K LK LS  GC G  S          NL    S   +L+ P SLSGL  + 
Sbjct: 730  EIPSTINQLKKLKRLSLNGCKGLLSDDID------NLYSEKSHSVSLLRPVSLSGLTYMR 783

Query: 146  KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
             L L  C L +  IP DIG+L  L+ L L  N+F  LP     L NL +L L DC +LQS
Sbjct: 784  ILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQS 843

Query: 206  LPQLP-----------------PNVE------KVRVNGCASLVTLLGALKLRKSSCTIID 242
            +  LP                 P++       K+++N C SL  + G       S  ++ 
Sbjct: 844  ILSLPRSLLFLDVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVL- 902

Query: 243  FVDSLKLLGKNGLAISMLREFL----EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
              D  KL   +    +ML  +L    E +  P  + ++      IP W  ++ E  S ++
Sbjct: 903  --DGCKLASTDTTINTMLENWLKRNHECIYIPVDRPNV------IPNWVYFEEEKRSFSI 954

Query: 299  TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLW 358
            T P    N + VVG+     F  P   + I     YP    V + +       RGS   W
Sbjct: 955  TVPE-TDNSDTVVGFTLWMNFVCPMGYSSI-----YPRAIIVRNLT-------RGS--AW 999

Query: 359  LLYLPRQSYYCNVKWHFESNHFRLSFMDERE 389
            +  L        +  +  +N F +   DE E
Sbjct: 1000 IHSLKNSKIRIQMNANLLTNDFHIVTGDEIE 1030


>gi|255578414|ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530425|gb|EEF32312.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 180/421 (42%), Gaps = 56/421 (13%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
            E+  S+  L+ L  L+ + C NL  LPS          L L GC K E   E VG+++ L
Sbjct: 653  EVHQSVGNLAKLEFLSFEFCFNLKNLPSTFKLRSLRTLL-LTGCQKLEAFPEIVGEIKWL 711

Query: 76   EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GA 132
            E+L ++ TAI+  PSSI  +  LK L+   C         YLP  I  + +   L   G 
Sbjct: 712  EKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKN-----LTYLPHGIYKLEQLKCLFLEGC 766

Query: 133  LMLPSLS---------GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
             ML             G      LDL +C L +     +      LK L LS N+FV+LP
Sbjct: 767  SMLHEFPANPNGHSSLGFPKFRCLDLRNCNLPDITFLKEHNCFPMLKDLDLSGNDFVSLP 826

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-------RKS 236
               +   NL  LKL  C ++Q +P+LP  +++V    C SL       ++       R +
Sbjct: 827  PYFHLFNNLRSLKLSKCMKVQEIPELPLYIKRVEARDCESLERFPQLARIFKCNEEDRPN 886

Query: 237  SCTIIDFVDSLKLLG------KNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
                IDF +  KL        +N +     R+ L +         I +PGSEIPKWF Y+
Sbjct: 887  RLHDIDFSNCHKLAANESKFLENAVLSKKFRQDLRI--------EIFLPGSEIPKWFSYR 938

Query: 291  NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFG 350
            +E  S++   PS  C   ++     C +  +    T       + +  +V+  S   +F 
Sbjct: 939  SEEDSLSFQLPSREC--ERIRALILCAILSIKDGETVNISRQVFINGQNVIMFS--RQFF 994

Query: 351  HRGSDHLWLLYLPRQSYYCNVKWHFESN---HFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
               S+H+WL YLPR+        H + N   HF +SF          G+  G  +K CG 
Sbjct: 995  SLESNHVWLYYLPRRFIR---GLHLKQNGDVHFEVSFK-------VLGATMGSTLKSCGV 1044

Query: 408  H 408
            +
Sbjct: 1045 Y 1045


>gi|15234388|ref|NP_192938.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis
            thaliana]
 gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis
            thaliana]
 gi|332657683|gb|AEE83083.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 162/350 (46%), Gaps = 47/350 (13%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            E +  LLLD T IK +P SI+    L  L LK CK L  L S++  LK L+ L L GC +
Sbjct: 734  ENVEVLLLDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSQ 793

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             E   E    +ESLE L +  T+I   P  + L  N+KT S  G +   S +  ++P   
Sbjct: 794  LEVFPEIKEDMESLEILLMDDTSITEMPKMMHL-SNIKTFSLCGTSSHVSVSMFFMP--- 849

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                          P+L G   LT L LS C L +  +P +IG L SL++L LS NN   
Sbjct: 850  --------------PTL-GCSRLTDLYLSRCSLYK--LPDNIGGLSSLQSLCLSGNNIEN 892

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSSC 238
            LP S N L NL+   L+ CK L+SLP LP N++ +  + C SL TL   L  L + +   
Sbjct: 893  LPESFNQLNNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLETLANPLTPLTVGERIH 952

Query: 239  TIIDFVDSLKL-----------------LGKNGLAISMLREFLEVVSAPSHKFSIVVPGS 281
            ++  F +  KL                 L  N  A    R F+     P     I  P +
Sbjct: 953  SMFIFSNCYKLNQDAQASLVGHARIKSQLMANASAKRYYRGFV-----PEPLVGICYPAT 1007

Query: 282  EIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
            EIP WF +Q  G S+ +  P + C++N  VG A   V     +    +RF
Sbjct: 1008 EIPSWFCHQRLGRSLEIPLPPHWCDIN-FVGLALSVVVSFKDYEDSAKRF 1056


>gi|296089455|emb|CBI39274.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 175/421 (41%), Gaps = 73/421 (17%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           L LD+T I+ +P S+  L+ L +L L+ C+NL  LP++I  LKSLK L+L GC   E  L
Sbjct: 350 LFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFL 409

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E    +E LE L +  T I   PSSI  ++ LK+L    C    +     LP  I  +  
Sbjct: 410 EITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLELINCENLVA-----LPNSIGNLTC 464

Query: 127 SSDLGALMLPSLSGLGS--------LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            + L     P L  L          LT LDL  C L E  IPSD+  L SL+ L +S+N+
Sbjct: 465 LTSLHVRNCPKLHNLPDNLRSQQCILTSLDLGGCNLMEEEIPSDLWCLSSLEFLNISENH 524

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
              +P  I  L  L  L +  C  L+ + +LP ++  +  +GC  L T            
Sbjct: 525 MRCIPTGITHLCKLRTLLMNHCPMLEVIGELPSSLGWIEAHGCPCLET------------ 572

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSIT 297
                        +   ++        + S    +F+I++PGS  IP+W  +Q  G  ++
Sbjct: 573 -------------ETSSSLLWSSLLKHLKSPIQRRFNIIIPGSSGIPEWVSHQRMGCEVS 619

Query: 298 VTRPSYLCNMNQVVGYA------------ACRVFHVPK---------HSTGIRRFYRYPH 336
           V  P      N ++G+               R  + P+          S  +   + +PH
Sbjct: 620 VELPMNWYEDNNLLGFVLFFHHVPLDDDECVRTSYFPQCELAISHGDQSKRLDNIHFHPH 679

Query: 337 PAHV----LHCSMDEKFGHRGSD-HLWLLYLP--------RQSYYCNVKWHFESNHFRLS 383
                   + CS +       SD  LW+ Y P        R   + N K HF +  +  S
Sbjct: 680 CKRYCIEGISCSSERYDSGSTSDPALWVTYFPQIGIPSKYRSRKWNNFKAHFYNRVYNAS 739

Query: 384 F 384
           F
Sbjct: 740 F 740



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 29/232 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+CL  L LD+T IKE+                        P++I SL SL+ L+L  C 
Sbjct: 203 MKCLLNLFLDETAIKEL------------------------PNSIGSLTSLEMLSLRECS 238

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           KFE   +    +  L EL + G+ I+  P SI  +++L+ L+ R C+             
Sbjct: 239 KFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMK 298

Query: 121 INLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              M    D     LP+  G L +L  LDLS C   E   P    N+ +L  L+L +   
Sbjct: 299 CLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLE-RFPEIQKNMGNLWGLFLDETAI 357

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLL 228
             LP S+  L  LE+L LE+C+ L+SLP     ++ ++   +NGC++L   L
Sbjct: 358 RGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFL 409



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 12/179 (6%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LPS+I  L+SL+ L+L  C KFE   E  G ++ L  L +  TAI+  P+SI  + +L+ 
Sbjct: 172 LPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTSLEM 231

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDL-----GALMLP-SLSGLGSLTKLDLSDCGL 154
           LS R C+     +  +       M R  +L     G   LP S+  L SL +L+L  C  
Sbjct: 232 LSLRECSKFEKFSDVFTN-----MGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSN 286

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
            E   P   GN+  LK L L       LP  I  L  LE L L  C  L+  P++  N+
Sbjct: 287 FE-KFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLERFPEIQKNM 344



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 26/132 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L L +T I E+P SIE L GL  L L  C+NLV LP++I +L  L +L++  C 
Sbjct: 415 MEQLEGLFLCETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCP 474

Query: 61  KFENLLETVGQ--------------------------VESLEELDISGTAIRCPPSSIFL 94
           K  NL + +                            + SLE L+IS   +RC P+ I  
Sbjct: 475 KLHNLPDNLRSQQCILTSLDLGGCNLMEEEIPSDLWCLSSLEFLNISENHMRCIPTGITH 534

Query: 95  MKNLKTLSFRGC 106
           +  L+TL    C
Sbjct: 535 LCKLRTLLMNHC 546



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 20/186 (10%)

Query: 43  SNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
           SN+  L     L L  C KFE   +T   +  L  L +  + I+  PSSI  +++L+ L 
Sbjct: 127 SNVKQLWKGNRLYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILD 186

Query: 103 FRGCNGPPSSASCYLPFP---------INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCG 153
              C       S +  FP         +NL    + +  L   S+  L SL  L L +C 
Sbjct: 187 LSCC-------SKFEKFPEIQGNMKCLLNLFLDETAIKELP-NSIGSLTSLEMLSLRECS 238

Query: 154 LGEGAIPSDI-GNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
             E    SD+  N+  L+ L L  +    LP SI  L +LE+L L  C   +  P++  N
Sbjct: 239 KFEKF--SDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGN 296

Query: 213 VEKVRV 218
           ++ +++
Sbjct: 297 MKCLKM 302


>gi|359489072|ref|XP_002262840.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 671

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 144/291 (49%), Gaps = 17/291 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L+ L    T IKE+P SI  L GL +L L+ CKNL  LPS+I+ LK L+ L L GC 
Sbjct: 165 MESLKNLSASGTAIKELPYSIRHLIGLSRLNLENCKNLRSLPSSIHGLKYLENLALNGCS 224

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
             E   E    VE    L + G  I   PSSI  +K LK+L    C      P+S     
Sbjct: 225 NLEAFSEIEVDVEHSRHLHLRGMGITELPSSIERLKGLKSLELINCENLETLPNSIGNLT 284

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +R  S L  L     S    LT+LDL+ C L EGAIPSD+  L SL++L +S+N
Sbjct: 285 CLSRLFVRNCSKLHKLPDNLRSLQCCLTELDLAGCNLMEGAIPSDLWCLSSLESLDVSEN 344

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
           +   +P  I  L  L  L +  C +L+ + +LP ++  ++ +GC      L AL    + 
Sbjct: 345 HIRCIPVGIIQLSKLIFLGMNHCPKLEEISELPSSLRMIQAHGCPC----LKALSCDPTD 400

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH-KFSIVVPGSE-IPKW 286
                 ++  KL  +N   +   R+F +     +H   S+V+PGS  IP+W
Sbjct: 401 VLWFSLLNYFKLDTEN---LKCERDFYK-----THCNISVVIPGSNGIPEW 443



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 117/250 (46%), Gaps = 50/250 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC----------------KNLV----- 39
           M  LREL L KT IKE+P SI  L  L  L L GC                KNL+     
Sbjct: 1   MRHLRELYLRKTGIKELPGSIGYLESLESLNLSGCSDFEKFPTIQGTMKCLKNLILEGTA 60

Query: 40  --RLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
              LP+NI  LKSL+T+ L    KFE   E +G ++ L+EL +  TAI+  P+SI  ++ 
Sbjct: 61  IKELPNNIGYLKSLETIYLTNSSKFEKFPEILGNMKCLKELYLENTAIKELPNSIGCLEA 120

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+ LS +      +++   LP                  S+  L +L  L + DC   E 
Sbjct: 121 LQNLSLQ------NTSIKELP-----------------NSIGSLKALEVLFVDDCSNLE- 156

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VE 214
             P    N+ SLK L  S      LP SI  L  L +L LE+CK L+SLP        +E
Sbjct: 157 KFPEIQRNMESLKNLSASGTAIKELPYSIRHLIGLSRLNLENCKNLRSLPSSIHGLKYLE 216

Query: 215 KVRVNGCASL 224
            + +NGC++L
Sbjct: 217 NLALNGCSNL 226


>gi|356522594|ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 155/319 (48%), Gaps = 54/319 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L+L +T I ++P S+  L GL  L LK CKNLV LP   + LKSLK L++ GC 
Sbjct: 698 MEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGCS 757

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L + + +++ LE++ +S      PPS                              
Sbjct: 758 KLCSLPDGLEEMKCLEQICLSADD-SLPPSK----------------------------- 787

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                       L LPSL       +++LS C L + +IP +  +L  L+    ++NNFV
Sbjct: 788 ------------LNLPSLK------RINLSYCNLSKESIPDEFCHLSHLQKTDPTRNNFV 829

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT-LLGALKLRK--SS 237
           TLP+ I+ L  LE L L  CK+LQ LP+LP +++++  + C SL T      K R   +S
Sbjct: 830 TLPSCISKLTKLELLILNLCKKLQRLPELPSSMQQLDASNCTSLETSKFNPSKPRSLFAS 889

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              + F   LK  G     +  L E ++ +  P  +F + + GSEIP WF+ +   S   
Sbjct: 890 PAKLHFPRELK--GHLPRELIGLFENMQELCLPKTRFGMFITGSEIPSWFVPRKSVSFAK 947

Query: 298 VTRPSYLCNMNQVVGYAAC 316
           +  P + C +N+ VG+A C
Sbjct: 948 IAVP-HNCPVNEWVGFALC 965


>gi|357500591|ref|XP_003620584.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495599|gb|AES76802.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1392

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 189/419 (45%), Gaps = 60/419 (14%)

Query: 30   LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
            L L+GC NLV L  +I  L++L  LNL  C+   ++  T+  + SLE+L+IS  + +   
Sbjct: 652  LNLEGCTNLVELDPSIGLLRNLVYLNLENCYNLVSIPNTIFGLGSLEDLNISCCS-KVFN 710

Query: 90   SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA-----LMLPSLSGLGSL 144
              I L KN K            S S    F   ++   S   A      +LPSL  L  L
Sbjct: 711  KPIHLEKNKKRHYI--TESASHSRSTSSVFEWTMLPHHSSFSAPTTHTSLLPSLRSLHCL 768

Query: 145  TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
              +D+S C L +  +P  I  LH L+ L L  N+FVTLP S+  L  L  L LE C+ L+
Sbjct: 769  RNVDISFCYLRQ--VPGTIECLHWLERLNLGGNDFVTLP-SLRKLSKLVYLNLEHCRLLE 825

Query: 205  SLPQLPPNVE-----KVRVNGCASLVTLLGALKL-RKSSCTIIDFVDSLKLLGKNGLAIS 258
            SLPQLP         + +     + + +    KL  +  C+ + F              S
Sbjct: 826  SLPQLPSPTSIGRDHREKEYKLNTGLVIFNCPKLGERERCSSMTF--------------S 871

Query: 259  MLREFLEVV--SAPSH--KFSIVVPGSEIPKWFMYQNEGSSITVTR-PSYLCNMNQVVGY 313
               +F++    S P++  +F IV PG+EIP W   Q+ G SI V + P    N N ++G+
Sbjct: 872  WTTQFIQAYQQSYPTYLDEFQIVSPGNEIPSWINNQSMGDSIPVDQTPIMHDNNNNIIGF 931

Query: 314  AACRVFHV-PKHSTGI--RRFY--------RYPHPAHVLHCSMDEKFGHRGSDHLWLLYL 362
              C VF + P   + I  R  Y        R   P  V     D+    + S HLWL+YL
Sbjct: 932  LCCVVFSMTPSRRSNIDPRSIYMEIGGTRKRIWLPVRVAGMFTDDLITMKSS-HLWLIYL 990

Query: 363  PRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
            PR+SY+            + + +            +G++VK CG+H     +++EF+ T
Sbjct: 991  PRESYH------------KFAGIKRVAGMFLGNKLSGMEVKSCGYHWVCKQDLQEFNLT 1037


>gi|356517237|ref|XP_003527295.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1098

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 165/362 (45%), Gaps = 54/362 (14%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN--LLETVGQ 71
            ++ +  SI LL  L  L LK CKNLV LP++I  L SL+ L L GC K  N  L   +  
Sbjct: 724  LRHIDPSIGLLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILSGCSKLYNTELFYELRD 783

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
             E L+++DI G  I    +S +  ++ K            S SC +P             
Sbjct: 784  AEQLKKIDIDGAPIHFQSTSSYSRQHQK------------SVSCLMP------------S 819

Query: 132  ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
            + + P +S      KLDLS C L E  IP  IG +  L+ L LS NNF TLP ++  L  
Sbjct: 820  SPIFPCMS------KLDLSFCNLVE--IPDAIGIMSCLERLDLSGNNFATLP-NLKKLSK 870

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLG 251
            L  LKL+ CK+L+SLP+LP  +           VT       RK+   I +  + +    
Sbjct: 871  LVCLKLQHCKQLKSLPELPSRI---------GFVTKALYYVPRKAGLYIFNCPELVDRER 921

Query: 252  KNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVV 311
               +  S + +  +      +K   V PGSEI +W   ++EG+ +++     + + N  +
Sbjct: 922  CTDMGFSWMMQLCQY--QVKYKIESVSPGSEIRRWLNNEHEGNCVSLDASPVMHDHNW-I 978

Query: 312  GYAACRVFHVPKHSTGIRRFYRYPHPAHV-------LHCSMDEKFGHRGSDHLWLLYLPR 364
            G A C +F VP  +     F    +P H+       L+  +D +     SDH+WL ++ R
Sbjct: 979  GVAFCAIFVVPHETLSAMSFSETEYPFHLFGDIRVDLYGDLDLELVLDKSDHMWLFFVNR 1038

Query: 365  QS 366
              
Sbjct: 1039 HD 1040


>gi|359493561|ref|XP_002268895.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1080

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 165/353 (46%), Gaps = 42/353 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L++T IKE+P SI  L+ L  L L+ CKNL  LP++I  LKSL+ LN+ GC 
Sbjct: 610 MGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCS 669

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
                 E +  ++ L EL +S T I   P SI  +K L+ L    C      P+S     
Sbjct: 670 NLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLT 729

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +R  S L  L     S    L +LDL+ C L +GAIPSD+  L SL+ L +S++
Sbjct: 730 HLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSES 789

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT----------- 226
               +P +I  L NL  L++  C+ L+ +P+LP  +E +   GC  + T           
Sbjct: 790 PIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGTLSTPSSPLWSS 849

Query: 227 LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPK 285
           LL   K R   C     +DS            M+  F        H   +V+PGS  IP+
Sbjct: 850 LLNLFKSRTQYCEC--EIDS----------NYMIWYF--------HVPKVVIPGSGGIPE 889

Query: 286 WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF--HVPK--HSTGIRRFYRY 334
           W  +Q+ G    +  P      N  +G+A   VF  H+P   +S  + RF ++
Sbjct: 890 WISHQSMGRQAIIELPKNRYEDNNFLGFA---VFFRHLPLDFYSHEVGRFLQF 939



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 123/292 (42%), Gaps = 79/292 (27%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN----------------------- 37
           M  LR L L ++ IKE+P SIE L  L  LTL GC+N                       
Sbjct: 471 MGSLRILYLGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKAD 530

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           +  LP++   L+S + L L  C   EN  E +  ++ LE L ++ TAI+  P++   ++ 
Sbjct: 531 IQELPNSFGYLESPQNLCLDDCSNLENFPE-IHVMKRLEILWLNNTAIKELPNAFGCLEA 589

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+ L   GC+                            P +  +GSL  L L++  + E 
Sbjct: 590 LQFLYLSGCSNFEE-----------------------FPEIQNMGSLRFLRLNETAIKE- 625

Query: 158 AIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP--------- 207
            +P  IG+L  L+ L L    N  +LP SI  L +LE L +  C  L + P         
Sbjct: 626 -LPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHL 684

Query: 208 -----------QLPPNVEKVR------VNGCASLVTL---LGALKLRKSSCT 239
                      +LPP++E ++      +N C +LVTL   +G L   +S C 
Sbjct: 685 GELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCV 736



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 106/256 (41%), Gaps = 61/256 (23%)

Query: 43  SNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
           + ++S+ +L+ L L  C + +   E  G + SL  L +  + I+  PSSI  +  L+ L+
Sbjct: 442 AKLSSMPNLEELYLAFCERLKKFPEIRGNMGSLRILYLGQSGIKEIPSSIEYLPALEFLT 501

Query: 103 FRGCNG---------------------------PPSSASCYLP-------------FP-I 121
             GC                             P S      P             FP I
Sbjct: 502 LWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPEI 561

Query: 122 NLMRRSSDL-----GALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
           ++M+R   L         LP+  G L +L  L LS C   E   P +I N+ SL+ L L+
Sbjct: 562 HVMKRLEILWLNNTAIKELPNAFGCLEALQFLYLSGCSNFE-EFP-EIQNMGSLRFLRLN 619

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTL----- 227
           +     LP SI  L  L  L LE+CK L+SLP       ++E + +NGC++LV       
Sbjct: 620 ETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIME 679

Query: 228 ----LGALKLRKSSCT 239
               LG L L K+  T
Sbjct: 680 DMKHLGELLLSKTPIT 695


>gi|147841230|emb|CAN68969.1| hypothetical protein VITISV_043153 [Vitis vinifera]
          Length = 1074

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 165/353 (46%), Gaps = 42/353 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L++T IKE+P SI  L+ L  L L+ CKNL  LP++I  LKSL+ LN+ GC 
Sbjct: 604 MGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCS 663

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
                 E +  ++ L EL +S T I   P SI  +K L+ L    C      P+S     
Sbjct: 664 NLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLT 723

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +R  S L  L     S    L +LDL+ C L +GAIPSD+  L SL+ L +S++
Sbjct: 724 HLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSES 783

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT----------- 226
               +P +I  L NL  L++  C+ L+ +P+LP  +E +   GC  + T           
Sbjct: 784 PIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGTLSTPSSPLWSS 843

Query: 227 LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPK 285
           LL   K R   C     +DS            M+  F        H   +V+PGS  IP+
Sbjct: 844 LLNLFKSRTQYCEC--EIDS----------NYMIWYF--------HVPKVVIPGSGGIPE 883

Query: 286 WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF--HVPK--HSTGIRRFYRY 334
           W  +Q+ G    +  P      N  +G+A   VF  H+P   +S  + RF ++
Sbjct: 884 WISHQSMGRQAIIELPKNRYEDNNFLGFA---VFFRHLPLDFYSHEVGRFLQF 933



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 118/282 (41%), Gaps = 79/282 (28%)

Query: 11  KTDIKEMPLSIELLSGLVQLTLKGCKN-----------------------LVRLPSNINS 47
           ++ IKE+P SIE L  L  LTL GC+N                       +  LP++   
Sbjct: 475 QSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELPNSFGY 534

Query: 48  LKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           L+S + L L  C   EN  E +  ++ LE L ++ TAI+  P++   ++ L+ L   GC+
Sbjct: 535 LESPQNLCLDDCSNLENFPE-IHVMKRLEILWLNNTAIKELPNAFGCLEALQFLYLSGCS 593

Query: 108 GPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH 167
                                       P +  +GSL  L L++  + E  +P  IG+L 
Sbjct: 594 NFEE-----------------------FPEIQNMGSLRFLRLNETAIKE--LPCSIGHLT 628

Query: 168 SLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP------------------- 207
            L+ L L    N  +LP SI  L +LE L +  C  L + P                   
Sbjct: 629 KLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPI 688

Query: 208 -QLPPNVEKVR------VNGCASLVTL---LGALKLRKSSCT 239
            +LPP++E ++      +N C +LVTL   +G L   +S C 
Sbjct: 689 TELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCV 730



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 28/227 (12%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           +KG   +  +PS+I  L +L+ L L GC  F+   +  G +     +      I+  P+S
Sbjct: 472 VKGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELPNS 531

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMRRSSDL-----GALMLPSLSG-LGSL 144
              +++ + L    C+   +       FP I++M+R   L         LP+  G L +L
Sbjct: 532 FGYLESPQNLCLDDCSNLEN-------FPEIHVMKRLEILWLNNTAIKELPNAFGCLEAL 584

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
             L LS C   E   P +I N+ SL+ L L++     LP SI  L  L  L LE+CK L+
Sbjct: 585 QFLYLSGCSNFE-EFP-EIQNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLR 642

Query: 205 SLPQLP---PNVEKVRVNGCASLVTL---------LGALKLRKSSCT 239
           SLP       ++E + +NGC++LV           LG L L K+  T
Sbjct: 643 SLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPIT 689


>gi|297734818|emb|CBI17052.3| unnamed protein product [Vitis vinifera]
          Length = 867

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 192/434 (44%), Gaps = 63/434 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E LREL L++T IKE+P SIE L+ L  L L GCKNLV LP +I++L  L+ L++  C 
Sbjct: 59  IENLRELHLNETAIKELPSSIEHLNRLEVLNLDGCKNLVTLPESISNLCFLEVLDVSYCS 118

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K   L + +G+++SL+ L   G  +  C   S+  + +L+ L   G              
Sbjct: 119 KLHKLPQNLGRLQSLKHLHACGLNSTCCQLLSLSGLCSLEKLILHG-------------- 164

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                  S  +   +L  +  L SL  LDLS C + EG IP++I +L SL+ L L  N F
Sbjct: 165 -------SKLMQGEILSDICCLYSLKALDLSFCSIDEGGIPTEICHLSSLRQLLLFGNLF 217

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
            ++PA +N L  L  L L  C+ L+ +P LP ++  + V+ C  L T  G L     +C 
Sbjct: 218 RSIPAGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHECTRLETSSGLLWSSLFNC- 276

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS----IVVPGSEIPKWFMYQNEGSS 295
                             S++++F   +     +F+    I+     +PKW  +  +G+ 
Sbjct: 277 ----------------FKSVIQDFECKIYPREKRFTRVNLIISVSCGMPKWISHHKKGAK 320

Query: 296 ITVTRPSYLCNMNQVVGYAACRVFHVPKHST-----GIRRFYRY--PHPAHVLHCSMDEK 348
           +    P      N ++G+    ++    + +         +++Y      H +    + +
Sbjct: 321 VVAKLPQNWYKNNDLLGFVLYSLYDPLDNESEETLENDATYFKYGLTLRGHKIQFVDELQ 380

Query: 349 F-----GHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
           F      +     +W+ Y P+      +   + SN +R          C    G  +KV+
Sbjct: 381 FYPSCQCYDVVPKMWMTYYPK----VEIVKKYPSNKWR----QLTASFCGFSRGKAMKVE 432

Query: 404 RCGFHPGYMHEVEE 417
            CG H  Y H+ E+
Sbjct: 433 ECGIHLIYAHDHEK 446



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 173/424 (40%), Gaps = 79/424 (18%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R+L L    I E+P +IE    L  L L+ CKNL RLPS+I   KSL TL   GC    +
Sbjct: 468 RKLCLKGNAINELP-TIECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRS 526

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E +  VE+L EL + GTAI   P+SI  ++ L+ L+   C                  
Sbjct: 527 FPEILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDC------------------ 568

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-----F 179
              +DL +L   S+  L SL  L++S C   E   P ++ +L  L+ L  S  N     F
Sbjct: 569 ---TDLVSLP-ESICNLSSLKILNVSFCTKLE-KFPENLRSLQCLEDLSASGLNLGMDCF 623

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT------LLGALKL 233
            ++ A I  L  L  L L  C+ L   P+LPP++  + V+    L T      LLG    
Sbjct: 624 SSILAGIIQLSKLRVLDLSHCQGLLQAPELPPSLRYLDVHSLTCLETLSSPSSLLGVFLF 683

Query: 234 RKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNE 292
           +    TI +F                     E  S       +V+ G+  IP+W   Q +
Sbjct: 684 KCFKSTIEEF---------------------ECGSYWDKAIRVVISGNNGIPEWISQQKK 722

Query: 293 GSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY----PHPAHV----LHCS 344
           GS IT+  P      +  +G+A    F +P    G+              HV     +C 
Sbjct: 723 GSQITIELPMDWYRKDDFLGFALYSAF-IPMACDGLNCELNICGDQSECCHVDDVRFYCC 781

Query: 345 MDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKR 404
             E  G   S  + + Y P+ +   N  W  E    + SF         +  GT ++VK 
Sbjct: 782 --EICGE--SSQMCVTYYPKVAID-NQYWSNEWRRLKASFR--------SFDGTPVEVKE 828

Query: 405 CGFH 408
            GFH
Sbjct: 829 WGFH 832



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 12/123 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E LREL LD T I+E+P SI+ L GL  L L  C +LV LP +I +L SLK LN+  C 
Sbjct: 534 VENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDLVSLPESICNLSSLKILNVSFCT 593

Query: 61  KFENLLETVGQVESLEELDISG--TAIRCPPS---SIFLMKNLKTLSFRGCNG------- 108
           K E   E +  ++ LE+L  SG    + C  S    I  +  L+ L    C G       
Sbjct: 594 KLEKFPENLRSLQCLEDLSASGLNLGMDCFSSILAGIIQLSKLRVLDLSHCQGLLQAPEL 653

Query: 109 PPS 111
           PPS
Sbjct: 654 PPS 656


>gi|224093616|ref|XP_002309943.1| predicted protein [Populus trichocarpa]
 gi|222852846|gb|EEE90393.1| predicted protein [Populus trichocarpa]
          Length = 451

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 185/438 (42%), Gaps = 88/438 (20%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L LKGCKNL++LP +I  LKSL  L L GC K + L E +  ++ L    
Sbjct: 21  SIGNLGSLFLLNLKGCKNLIKLPRSIGLLKSLDKLILSGCSKLDELPEELRTLQCLR--- 77

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
                +R   +SI  +++ + L++     P  S             +S+      LP   
Sbjct: 78  ----VLRADETSINRLQSWQ-LNWWSWLFPRRSL------------QSTSFSFTFLPC-- 118

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
              SL KL L+DC + +  IP D+ +L +L+ L LSKN   TLP S+N L  L+ L L  
Sbjct: 119 ---SLVKLSLADCNITDDVIPDDLSSLPALEHLNLSKNPIQTLPESMNSLSMLQDLLLNH 175

Query: 200 CKRLQSLPQLPPNVEKVRVN-----------------------GCASLVTLLGALKLRKS 236
           C+ L+SLP+LP +++K+R                         GC  LV + G   L   
Sbjct: 176 CRSLRSLPELPTSLKKLRAEKCTKLERIANLPNLLRSLRLNLIGCKRLVQVQGLFNLEMM 235

Query: 237 SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH-----------KFSIVVPGSEIPK 285
                  + +L L     L  S+  E +  ++  S             FSI +PGSE+P 
Sbjct: 236 REFDAKMIYNLHLFNIESLG-SIEVEMINSITKTSRITRLQILQEQGIFSIFLPGSEVPS 294

Query: 286 WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSM 345
           W+ +Q + +S++   P       ++ G   C V+ +   +T  +    YP  A + + + 
Sbjct: 295 WYSHQKQNNSVSFAVPPL--PSRKIRGLNLCIVYGL--RNTDKKCATLYPPDAEISNKTK 350

Query: 346 DEKFGHR---------GSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGS 396
             K+ +          G D LWL +           W F ++   +      + +  A  
Sbjct: 351 VLKWSYNPIVYGVPQIGEDMLWLSH-----------WRFGTDQLEVG----DQVNVSASV 395

Query: 397 GTGLKVKRCGFHPGYMHE 414
               +VK+CG H  Y  E
Sbjct: 396 TPDFQVKKCGVHLVYEQE 413


>gi|356514917|ref|XP_003526148.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1106

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 177/411 (43%), Gaps = 63/411 (15%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN--LLETVGQVESLEE 77
            SI LL  L +L LK CKNLV LP++I  L SL+ LNL GC K  N  LL  +   E L++
Sbjct: 735  SIGLLKKLRELNLKNCKNLVSLPNSILGLNSLQYLNLSGCSKVYNTELLYELRDAEQLKK 794

Query: 78   LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
            +D  G  I    +S                    S SC                  ++PS
Sbjct: 795  IDKDGAPIHFQSTS------------SDSRQHKKSVSC------------------LMPS 824

Query: 138  LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
                  + +LDLS C L E  IP  IG +  L+ L LS NNF TLP ++  L  L  LKL
Sbjct: 825  SPIFQCMRELDLSFCNLVE--IPDAIGIMSCLERLDLSGNNFATLP-NLKKLSKLVCLKL 881

Query: 198  EDCKRLQSLPQLPPNVEKVRVNGC----ASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
            + CK+L+SLP+LP  +E     G     A L        + +  CT + F   ++L  + 
Sbjct: 882  QHCKQLKSLPELPSRIEIPTPAGYFGNKAGLYIFNCPKLVDRERCTNMAFSWMMQLCSQV 941

Query: 254  GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
             +  S+            + F  V PGSEIP+WF  ++EG+ +++     + + N  +G 
Sbjct: 942  CILFSLW----------YYHFGGVTPGSEIPRWFNNEHEGNCVSLDASPVMHDRNW-IGV 990

Query: 314  AACRVFHVPKHSTGIRRFYRYPHPAHV-------LHCSMDEKFGHRGSDHLWLLYLPRQS 366
            A C +F VP  +     F     P H+        +  +D +     SDH+ L +L R  
Sbjct: 991  AFCAIFVVPHETLLAMGFSNSKGPRHLFGDIRVDFYGDVDLELVLDKSDHMCLFFLKRHD 1050

Query: 367  YYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEE 417
               +    F   H  L     R       S    +VK+ G+   Y  ++E+
Sbjct: 1051 IIAD----FHLKHRYLGRWVSRYDGVLKESYA--EVKKYGYRWVYKGDIEQ 1095


>gi|298205194|emb|CBI17253.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 130/237 (54%), Gaps = 19/237 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME ++E L  +T IKE+P S+E L+ +  L L  CKNL  L S+I   KS   L L GC 
Sbjct: 43  MEDMKEFLDLRTGIKELPSSMEHLN-INSLFLSDCKNLRSLLSSIRRFKSFCRLFLNGCS 101

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              N  E +  ++ LE L + GTAI+  PSSI  +K+L+ L    C    +     +P  
Sbjct: 102 SLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVT-----IPDS 156

Query: 121 INLMRRSSDLGALMLP----------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           IN +R    L  L+LP          +L GL +L +LDLS C L EG+IP+DI  L+SL 
Sbjct: 157 INDLRC---LKRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLC 213

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           TL LS N+ V++P+ I  L  L  L +  CK LQ +P+L  ++ ++  +GC  L  L
Sbjct: 214 TLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAHGCTKLEML 270


>gi|297813715|ref|XP_002874741.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297320578|gb|EFH51000.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1212

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 158/349 (45%), Gaps = 46/349 (13%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            E +  LLLD T IK +P SIE L  L  L LK CK L  L S++  LK L+ L L GC +
Sbjct: 723  ENVEVLLLDGTAIKSLPESIETLRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSR 782

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             E   E    +ESLE L +  TAI   P  + L  N++T S  G +   S +  ++P   
Sbjct: 783  LEVFPEIKEDMESLEILLMDDTAITEMPKMMHL-SNIQTFSLCGTSSQVSVSMFFMP--- 838

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                          P+L G   LT L LS C L +  +P +IG L SL++L LS NN   
Sbjct: 839  --------------PTL-GCSRLTDLYLSRCSLYK--LPDNIGGLSSLQSLCLSGNNIEN 881

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL---------- 231
            LP S N L NL+   L+ CK L+SLP LP N++ +  + C SL TL   L          
Sbjct: 882  LPESFNQLHNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLETLENPLTPLTVGERIH 941

Query: 232  ---------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE 282
                     KL + + +++        L  N       R F+     P     I    ++
Sbjct: 942  SMFIFSNCYKLNQDAQSLVGHARIKSQLMANASVKRYYRGFI-----PEPLVGICYAATD 996

Query: 283  IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
            IP WF +Q  G S+ +  P + C+ +  VG A   V     +    +RF
Sbjct: 997  IPSWFCHQRLGRSLEIPLPPHWCDTD-FVGLALSVVVSFMDYEDSAKRF 1044


>gi|359493553|ref|XP_003634625.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1273

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 193/471 (40%), Gaps = 85/471 (18%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L  L L  T IK++    E L+ L+  +L  CKNL  LPSNI  L+SL TL+L  C 
Sbjct: 833  MQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLESLTTLDLNHCS 892

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E   E +  ++ L+ LD+ GTAI+  PSS+  +K L+ L    C    +     LP  
Sbjct: 893  NLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNLET-----LPHT 947

Query: 121  INLMRRSSDLGALMLP----------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
            I  +    DL A   P          +L GL SL  LDLS C   EGAI SDIG  + L+
Sbjct: 948  IYDLEFLVDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLSYCDGMEGAIFSDIGQFYKLR 1007

Query: 171  TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA 230
             L +S                        CK LQ +P+ P  + ++  + C +L TL   
Sbjct: 1008 ELNISH-----------------------CKLLQEIPEFPSTLREIDAHDCTALETLFSP 1044

Query: 231  LKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMY 289
                 SS     F+  LK   ++                 +    I +PGS  IP+W  Y
Sbjct: 1045 -----SSPLWSSFLKLLKSATQDS-----------ECDTQTGISKINIPGSSGIPRWVSY 1088

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPA----HVLHCSM 345
            Q  G+ I +  P  L   N   G+A    F++ +   G  + +    P      +L  S 
Sbjct: 1089 QKMGNHIRIRLPMNLYEDNNFFGFA---FFYLYQKVNGSEKHFEDDFPLLYSWKLLGGSS 1145

Query: 346  D-------------EKFGHRG--SDHLWLLYLPRQSYYCNVKWHFESNHFR---LSFMDE 387
            D             E +   G  SD LW++Y P+ +    V    +SN  R   +SF D 
Sbjct: 1146 DKGDSSFFINYDPCECYKSNGGVSDRLWVVYYPKVA----VLDEHDSNQRRSLEISF-DS 1200

Query: 388  REKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHH 438
             +  C    G G+ +     H      ++  D       ++ ++  +E +H
Sbjct: 1201 HQATCVNIKGVGIHLVYIQDHQQNHAALDLLDAQGNLDVQYPTFQDDEHNH 1251



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 54/226 (23%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L E+ L K++I+++    + L  L  L L+G   L  + SN +++ +L+ LNL  C  
Sbjct: 644 ENLIEINLKKSNIRQLWQGNKCLGKLKVLNLQGSTQLDHI-SNFSTMPNLERLNLRLCGS 702

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            + +  ++G +  L  LD+S   +            LK+L        PSS         
Sbjct: 703 LDKIDSSIGVLTKLTWLDLSNCKL------------LKSL--------PSS--------- 733

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                           +  L SL +L L +C   E  +  + G +  L+ L+L       
Sbjct: 734 ----------------IQYLDSLEELYLRNCSSLEKFLEMERGCMKGLRELWLDNTAIEE 777

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           L +SI  + +LE L L  CK L+SLP          + G  SL TL
Sbjct: 778 LSSSIVHITSLELLSLRICKNLKSLPS--------NICGLESLTTL 815


>gi|356499237|ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1176

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 221/493 (44%), Gaps = 88/493 (17%)

Query: 1    MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
            M+ L EL+L   + +K++P   + +  L  L+++ C NL+ LP++I +LKSL+ LN+ GC
Sbjct: 694  MDSLEELILSGCSKVKKLPEFGKNMKSLSLLSVENCINLLCLPNSICNLKSLRKLNISGC 753

Query: 60   FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             +   L   + + ESLEELD+SGTAIR    S   ++ LK LSF G      ++   L +
Sbjct: 754  SRLSTLPNGLNENESLEELDVSGTAIREITLSKVRLEKLKELSFGGRKELAPNSQNLLLW 813

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                MR+  +L    +P LS L +L  LDLS C L + + PS +G+L  L+ L LS NNF
Sbjct: 814  ISKFMRQ-PNLKESTMPPLSSLLALVSLDLSYCDLNDESFPSHLGSLSLLQDLDLSGNNF 872

Query: 180  VTLPASINCLFN---LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
            V  PA   C+ N   L+ L   DC RL+SLP LPPN++ +  N C  L            
Sbjct: 873  VNPPA--QCIINLSMLQNLSFNDCPRLESLPVLPPNLQGLYANNCPKLKP---------- 920

Query: 237  SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN----- 291
                  F    ++L K    I   +  ++ +  P   F  ++PG+EIP WF  QN     
Sbjct: 921  ------FNLDEEMLWK----IYETQSRMDPIEGPEVWF--IIPGNEIPCWFDNQNCLAID 968

Query: 292  ------------EGSSITVTRPSYLCNMNQVVGYAACRVF-------------HVPKHST 326
                          +SITV  P   C +++  G A C V              +V   ST
Sbjct: 969  SSHHPYDKLGCDSVTSITVDVPKD-CQLSKWWGIAVCLVLEPSNMEEEDSSRSYVRPTST 1027

Query: 327  GIRR---FY-------RYPHPAHVLHCSMDEKFGH----RGSDHLWLLYLPRQSYYCNVK 372
            G      +Y       R P P       +  KFGH        ++ +++L     Y    
Sbjct: 1028 GNEEMCIYYWVCKAPDRDPDPKF----PIASKFGHLVYKLNDPYIHIIFLSADHVYIQHY 1083

Query: 373  WHFESNHFRLSFMDER-EKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTK--QWTRFT 429
               E    +L F  E   K C A       +K+CG       ++EE+ + +     +R T
Sbjct: 1084 LSGEQIQLQLIFFVENCSKSCKA------TIKKCGCRVVCKEKIEEWRKHSDGLNISRLT 1137

Query: 430  SYNLN-EFHHDFV 441
              N + EF  + V
Sbjct: 1138 EVNDDEEFRRELV 1150


>gi|224145016|ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1254

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 195/437 (44%), Gaps = 84/437 (19%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---- 59
            L  L L++T ++E+P SI  L GLV L LK CK LV LP N+  LKSL   ++ GC    
Sbjct: 718  LTYLNLNETAVEELPQSIGELGGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSIS 777

Query: 60   ----------------FKFENLLETVGQVESLEELDISG--------------------- 82
                               E L  ++G +  L  LD+SG                     
Sbjct: 778  RFPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLSGCSSITEFPKVSRNIRELYLDG 837

Query: 83   TAIRCPPSSIFLMKNLKTLSFRGCN----------GPPSSASCYLPFPINLMRRSSDLGA 132
            TAIR  PSSI L      ++F  C              S+    LP P+  ++  + L  
Sbjct: 838  TAIREIPSSIQLNV---CVNFMNCTCETANNLRFFQAASTGITKLPSPVGNLKGLACLEV 894

Query: 133  --------------LMLPSLS-GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                          L LP     L  L KL+L  C + +  +P  +G L SL+ L LS N
Sbjct: 895  GNCKYLKGIECLVDLHLPERDMDLKYLRKLNLDGCCISK--VPDSLGCLSSLEVLDLSGN 952

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
            NF T+P +I  L  L+ L L  C++L+S+P+LP  + K+  + C SL+ +  +  +  + 
Sbjct: 953  NFETMPMNIYKLVELQYLGLRSCRKLKSIPRLPRRLSKLDAHDCQSLIKVSSSYVVEGNI 1012

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFL----EVVSAPSHKFSIVVPGSEIPKWFMYQNEG 293
               I F + L+L   N + +  L +F      +   P+   S  +PG   P+WF +Q+ G
Sbjct: 1013 FEFI-FTNCLRLPVINQILLYSLLKFQLYTERLHQVPAGTSSFCLPGDVTPEWFSHQSWG 1071

Query: 294  SSITVTRPSYLCNMNQVVGYA--ACRVFHVPKHSTGIRRFYRYPHP---AHVLHCSMDEK 348
            S++T    S+  N ++ +G++  A   F    HS  ++  Y + +    +H L+C +   
Sbjct: 1072 STVTFHLSSHWAN-SEFLGFSLGAVIAFRSFGHSLQVKCTYHFRNKHGDSHDLYCYLHGW 1130

Query: 349  FGHR--GSDHLWLLYLP 363
            +  R   S+H+++ + P
Sbjct: 1131 YDERRMDSEHIFIGFDP 1147



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 32/212 (15%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + + P S++ L  LV L L+GCK L+ LPS  NS   L+TLNL GC   +   ET   
Sbjct: 659 TSLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRFNS-SFLETLNLSGCSNIKKCPET--- 714

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
              L  L+++ TA+   P SI  +  L  L+ + C              +NL      L 
Sbjct: 715 ARKLTYLNLNETAVEELPQSIGELGGLVALNLKNCK-----------LLVNLPENMYLLK 763

Query: 132 ALMLPSLSGLGSLTKL-DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
           +L++  +SG  S+++  D S                 +++ LYL+      LP+SI  L 
Sbjct: 764 SLLIADISGCSSISRFPDFS----------------RNIRYLYLNGTAIEELPSSIGDLR 807

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
            L  L L  C  +   P++  N+ ++ ++G A
Sbjct: 808 ELIYLDLSGCSSITEFPKVSRNIRELYLDGTA 839


>gi|147841678|emb|CAN73064.1| hypothetical protein VITISV_003258 [Vitis vinifera]
          Length = 1567

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 192/465 (41%), Gaps = 95/465 (20%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+     +D+ E+P+ IE  S L  L L+ C+NL  LPS+I   KSL TL+  GC + E+
Sbjct: 1077 RKCCFKDSDMNEVPI-IENPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLES 1135

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN--GPPSS---------- 112
              E +  +ESL +L + GTAI+  PSSI  ++ L+ L  R  N    P S          
Sbjct: 1136 FPEILQDMESLRKLFLDGTAIKEIPSSIQRLRVLQYLLLRSKNLVNLPESICNLTSFKTL 1195

Query: 113  --ASC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDC---GLGE 156
               SC  +   P NL R  S         D     LPSLSGL SL  L+L  C   G+ +
Sbjct: 1196 VVESCPNFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRALNLQGCNLKGISQ 1255

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            G                   N+F  +P  I+ L+NLE L L  CK LQ +P+LP  +  +
Sbjct: 1256 G-------------------NHFSRIPDGISQLYNLEDLDLGHCKMLQHIPELPSGLWCL 1296

Query: 217  RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI 276
              + C SL  L     L  SS          K   +  + +   REF   V     +F  
Sbjct: 1297 DAHHCTSLENLSSQSNLLWSS-----LFKCFKSQIQRVIFVQQ-REFRGRVKTFIAEFG- 1349

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV-------------FHVPK 323
                  IP+W  +Q  G  IT+  P      +  +G+  C +             F+   
Sbjct: 1350 ------IPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCFLYVPLEIETKTPWCFNCKL 1403

Query: 324  HSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPR----QSYYCNVKWHFESNH 379
            +      ++ Y        C  DE    +G     L+Y P+    +SY+ N +W   +  
Sbjct: 1404 NFDDDSAYFSYQSDQFCEFC-YDEDASSQGC----LMYYPKSRIPKSYHSN-EWRTLNAS 1457

Query: 380  FRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
            F + F               +KV RCGFH  Y H+ E+ + T  Q
Sbjct: 1458 FNVYF-----------GVKPVKVARCGFHFLYAHDYEQNNLTIVQ 1491



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 135/322 (41%), Gaps = 46/322 (14%)

Query: 8   LLDKTDIKEMPLSIELLS--------GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           L DK  + ++  S+ L+          L  LTL+GC +L  LP  I   K L+TL+  GC
Sbjct: 615 LHDKLRVIDLSHSVHLIRIPGFSSVPNLEILTLEGCVSLELLPRGIYKWKHLQTLSCNGC 674

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
            K E   E  G +  L  LD+SGTAI   PSSI  +  L+TL    C+            
Sbjct: 675 SKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHK-------- 726

Query: 120 PINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
                          +PS +  L SL  L+L  C + EG IPSDI  L SL+ L L   +
Sbjct: 727 ---------------IPSYICHLSSLKVLNLGHCNMMEGGIPSDICYLSSLQKLNLEGGH 771

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
           F ++P +IN L  L+ L L  C  L+ +P+LP  +  +  +G     +      L     
Sbjct: 772 FSSIPPTINQLSRLKALNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRAPYFPLH---- 827

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSIT 297
                     L+     A    R      S       IV+PGS+ IP+W M +       
Sbjct: 828 ---------SLVNCFSWAQDSKRTSFSDSSYHGKGTCIVLPGSDGIPEWIMDRENIHFAE 878

Query: 298 VTRPSYLCNMNQVVGYAACRVF 319
              P      N+ +G+A C V+
Sbjct: 879 AELPQNWHQNNEFLGFAICCVY 900



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++PS I  L SLK LNL  C 
Sbjct: 687 MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSYICHLSSLKVLNLGHCN 746

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
             E  + + +  + SL++L++ G      P +I  +  LK L+   CN
Sbjct: 747 MMEGGIPSDICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCN 794


>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 165/352 (46%), Gaps = 48/352 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +E LR   + +T I E+P  I  LS L  L + G + L  LP +I+ L+SL+ L L GC 
Sbjct: 814  IEVLR---ISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELRSLEKLKLSGCC 870

Query: 61   KFENLLETVGQVES-LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
              E+L   + Q  S L  LD+  T+I+  P +I  +  L+ L          +A    P 
Sbjct: 871  VLESLPPEICQTMSCLRWLDLERTSIKELPENIGNLIALEVLQ------AGRTAIRRAPL 924

Query: 120  PINLMRRSSDLGA-----------LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
             I  + R   L              + P LS    L  L LS+  + E  IP+ IGNL S
Sbjct: 925  SIARLERLQVLAIGNSFYTSQGLHSLCPHLSIFNDLRALCLSNMNMIE--IPNSIGNLWS 982

Query: 169  LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTL 227
            L  L LS NNF  +PASI  L  L +L + +C+RLQ+LP  LP  +  +  +GC SLV++
Sbjct: 983  LSELDLSGNNFEHIPASIRRLTRLSRLDVNNCQRLQALPDDLPRRLLYIYAHGCTSLVSI 1042

Query: 228  LGALK---LRK---SSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS 281
             G  K   LRK   S+C  +D              I + R      + P H +    PG 
Sbjct: 1043 SGCFKPCCLRKLVASNCYKLD----------QEAQILIHRNMKLDAAKPEHSY---FPGR 1089

Query: 282  EIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR 333
            ++P  F +Q  GSS+ + +PS     + ++G++AC +  V     GI    R
Sbjct: 1090 DVPSCFNHQAMGSSLRIRQPS-----SDILGFSACIMIGVDGELIGINILIR 1136



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 18/226 (7%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  + +  +   I+ L  L ++ L  CK L+ +P +++   +L+ LNL  C  
Sbjct: 605 EFLVELFMSNSHLHYLWNGIQPLRKLKKMDLSRCKYLIEIP-DLSKATNLEELNLSYC-- 661

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L E    +++L++L      + T ++  PS I L K+L+T+   GC    SS   + 
Sbjct: 662 -QSLTEVTPSIKNLQKLYCFYLTNCTKLKKIPSGIAL-KSLETVGMNGC----SSLMHFP 715

Query: 118 PFPINLMR---RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            F  N  R    S+ +  L    +S L  L +LD+SDC      +PS + +L SLK+L L
Sbjct: 716 EFSWNARRLYLSSTKIEELPSSMISRLSCLVELDMSDCQ-SIRTLPSSVKHLVSLKSLSL 774

Query: 175 SK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
           +   +   LP S+  L  LE L++  C  +   P+L  N+E +R++
Sbjct: 775 NGCKHLENLPDSLLSLTCLETLEVSGCLNINEFPRLAKNIEVLRIS 820



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 52/239 (21%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC-------------- 59
           + E+  SI+ L  L    L  C  L ++PS I +LKSL+T+ + GC              
Sbjct: 664 LTEVTPSIKNLQKLYCFYLTNCTKLKKIPSGI-ALKSLETVGMNGCSSLMHFPEFSWNAR 722

Query: 60  ------FKFENLLET-VGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPS 111
                  K E L  + + ++  L ELD+S   +IR  PSS+  + +LK+LS  GC    +
Sbjct: 723 RLYLSSTKIEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCKHLEN 782

Query: 112 SASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                LP                  SL  L  L  L++S C L     P    N+  L+ 
Sbjct: 783 -----LP-----------------DSLLSLTCLETLEVSGC-LNINEFPRLAKNIEVLR- 818

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP---QLPPNVEKVRVNGCASLVTL 227
             +S+ +   +PA I  L  L  L +   ++L+SLP       ++EK++++GC  L +L
Sbjct: 819 --ISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELRSLEKLKLSGCCVLESL 875


>gi|359493394|ref|XP_002279512.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 190/469 (40%), Gaps = 84/469 (17%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L LD+T I+ +P S+  L+ L +L L+ CKNL  LP++I  LKSL+ L+L GC 
Sbjct: 883  MGNLWALFLDETAIEGLPYSVGHLTRLDRLNLENCKNLKSLPNSICELKSLEGLSLNGCS 942

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              +   E    +E LE L +  T I   PSSI  ++ LK+L    C    +     LP  
Sbjct: 943  NLKAFSEITEDMEQLERLFLCETGISELPSSIEHLRGLKSLELINCENLVA-----LPNS 997

Query: 121  INLMRRSSDLGALMLPSLSGLGS--------LTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            I  +   + L     P L  L          LT LDL  C L E  IPSD+  L  L  L
Sbjct: 998  IGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFL 1057

Query: 173  YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
             +S++    +PA I  L  L  L +  C  L+ + +LP ++  +  +GC SL T      
Sbjct: 1058 NISESRMRCIPAGITQLCKLRILLMNHCPMLEVIGELPSSLGWIEAHGCPSLET------ 1111

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQN 291
                               +   ++        + S    +F+I++PGS  IP+W  +Q 
Sbjct: 1112 -------------------ETSSSLLWSSLLKHLKSPIQQQFNIIIPGSSGIPEWVSHQR 1152

Query: 292  EGSSITVTRPSYLCNMNQVVGYAACRVFHVP-KHSTGIRRFYRYPH-PAHVLHCSMDEKF 349
             G  ++V  P      N ++G+      HVP      +R     PH    + H    ++ 
Sbjct: 1153 MGCEVSVELPMNWYEDNNLLGFVLF-FHHVPLDDDECVRTSGFIPHCKLEISHGDQSKRL 1211

Query: 350  GHRG-------------------------SD-HLWLLYLP--------RQSYYCNVKWHF 375
             + G                         SD  LW+ Y P        R   + N K HF
Sbjct: 1212 DNIGFHPHCKTYWISGLSYGSTCYDSGSTSDPALWVTYFPQIGIPSKYRSRKWNNFKAHF 1271

Query: 376  ESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
            ++     SF          G     KVK CG H  Y  + +++ + +++
Sbjct: 1272 DNPVGNASFT--------CGENASFKVKSCGIHLIYAQDQKQWPQPSRK 1312



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 18/223 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           MECL+EL L+++ I+E+P SI  L+ L  L L  C N  + P    ++K L+ L L GC 
Sbjct: 624 MECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLEGCS 683

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           KFEN  +T   +  L  L +  + I+  PSSI  +++L+ L    C       S +  FP
Sbjct: 684 KFENFPDTFTYMGHLRGLHLRKSGIKELPSSIGYLESLEILDISCC-------SKFEKFP 736

Query: 121 ---------INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                     NL  R + +  L   S+  L SL  L L  C L          N+  L+ 
Sbjct: 737 EIQGNMKCLKNLYLRKTAIQELP-NSIGSLTSLEILSLEKC-LKFEKFSDVFTNMGRLRE 794

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           L L ++    LP SI  L +LE L L  C   +  P++  N++
Sbjct: 795 LCLYRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMK 837



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 68/302 (22%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-----------------------KN 37
            M+CL+ L L KT I+E+P SI  L+ L  L+L+ C                         
Sbjct: 742  MKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLYRSG 801

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
            +  LP +I  L+SL+ LNL  C  FE   E  G ++ L+EL +  TAI+  P+SI  ++ 
Sbjct: 802  IKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIKKLPNSIGRLQA 861

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML--PSLSGL----GSLTKLD--- 148
            L +L+  GC+           FP  + +   +L AL L   ++ GL    G LT+LD   
Sbjct: 862  LGSLTLSGCSNLER-------FP-EIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDRLN 913

Query: 149  LSDCGLGEGAIPSDIGNLHS------------------------LKTLYLSKNNFVTLPA 184
            L +C     ++P+ I  L S                        L+ L+L +     LP+
Sbjct: 914  LENCK-NLKSLPNSICELKSLEGLSLNGCSNLKAFSEITEDMEQLERLFLCETGISELPS 972

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTLLGALKLRKSSCTII 241
            SI  L  L+ L+L +C+ L +LP    N   +  + V  C  L  L   L+  +   T++
Sbjct: 973  SIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTML 1032

Query: 242  DF 243
            D 
Sbjct: 1033 DL 1034



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 66/265 (24%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           C    L D  DI +     E    L  + L   K LV++P   +S+ +L+ LNL GC   
Sbjct: 509 CKWSRLWDVDDIHDAFSKQERFEELKGIDLSNSKQLVKMPK-FSSMPNLERLNLEGCTSL 567

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L  ++G ++SL  L++ G   +R  PSS+   ++L+ L    C               
Sbjct: 568 CELHSSIGDLKSLTYLNLGGCEQLRSFPSSM-KFESLEVLYLNCC--------------- 611

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                         P+L                     P   GN+  LK LYL+++    
Sbjct: 612 --------------PNLK------------------KFPKIHGNMECLKELYLNESGIQE 639

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASL------VTLLGALK 232
           LP+SI  L +LE L L DC   +  P++  N++ +R   + GC+         T +G L+
Sbjct: 640 LPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLEGCSKFENFPDTFTYMGHLR 699

Query: 233 ---LRKSSC----TIIDFVDSLKLL 250
              LRKS      + I +++SL++L
Sbjct: 700 GLHLRKSGIKELPSSIGYLESLEIL 724


>gi|224131066|ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1176

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 198/453 (43%), Gaps = 80/453 (17%)

Query: 1    MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
            ++CL EL L   + +  +P SI  L  LV+L L     L  LP     LKSL  L++  C
Sbjct: 764  LKCLAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKLASLPDCFGELKSLVLLHISFC 823

Query: 60   FKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
             K  +L  ++GQ++ L EL++SG + +   P+SI+ +++LK ++   C     S      
Sbjct: 824  PKLVSLPNSIGQLKCLAELNLSGCSELANLPNSIYYLESLKWINLERCYMLNKS------ 877

Query: 119  FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
             P+ L  R S++  +        G L  L+L   G+ E  IP  IG+L SL+ L LS N+
Sbjct: 878  -PV-LNPRCSEVEEIAFG-----GCLQYLNLGASGVSE--IPGSIGSLVSLRDLRLSCND 928

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL----KLR 234
            F  +PA+I  L  L KL L  C+RLQ LP+LP +++ +  + C SL +L        K  
Sbjct: 929  FERIPANIKQLPMLIKLDLHGCERLQHLPELPSSLQVLMASYCISLRSLASIFIQGGKEY 988

Query: 235  KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS-----------IVVPGSEI 283
             ++    +F + LK L +N     M    L +    S  F+           + +PG E+
Sbjct: 989  AAASQQFNFSNCLK-LDQNACNRIMEDVHLRIRRMASSLFNREYFGKPIRVRLCIPGLEV 1047

Query: 284  PKWFMYQNEGSSITVTRPSYL---CNMNQVVGYAACRVFHV----PKHSTGIR------- 329
            P+WF Y+N G S ++  P++     N +Q +G+  C V        K    IR       
Sbjct: 1048 PEWFCYKNTGGS-SLNIPAHWHRTTNTDQFLGFTFCAVVSFGNSKKKRPVNIRCECHLIT 1106

Query: 330  --------RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFR 381
                     FY Y        C  +        DH+++             W   SN   
Sbjct: 1107 QGGNQSDLNFYCYEEVERKERCLWE-------GDHVFI-------------WSINSN--- 1143

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE 414
              F  E   H     GT   V +CG HP ++ +
Sbjct: 1144 -CFFKEASFHFKQLWGTADVVVKCGVHPLFVQD 1175



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 31/224 (13%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P SI+  + L +L L  C +L  LPS+I  L  L  L L+ C    +L +++G+++SLE
Sbjct: 637 LPSSIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRSLASLPDSIGELKSLE 696

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP 136
           +L             ++    L +L       P S         +NL+R S     + LP
Sbjct: 697 DL------------YLYFCSKLASL-------PNSFRELKCLVKLNLIRCSE---LVSLP 734

Query: 137 SLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEK 194
              G L SL +L L  C   E ++P+ IG L  L  L LS  +   +LP SI  L  L K
Sbjct: 735 DNIGELKSLVELKLFSCSKLE-SLPNSIGGLKCLAELCLSNFSKLTSLPNSIGKLKCLVK 793

Query: 195 LKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL---LGALK 232
           L L    +L SLP     ++    + ++ C  LV+L   +G LK
Sbjct: 794 LNLSYFSKLASLPDCFGELKSLVLLHISFCPKLVSLPNSIGQLK 837


>gi|449530355|ref|XP_004172161.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 987

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 187/428 (43%), Gaps = 65/428 (15%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +  +  SI  L  L  + L+ C NL  LP++I +L SL+T  + GC K   L + +G 
Sbjct: 511 TALSSLHPSIGQLCKLHLINLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGH 570

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPI---NLMR 125
           +ESL  L    TAI   P SI  +K L  LS  GCN   G  SSAS  LP+ +    L R
Sbjct: 571 LESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGCNCRSGSGSSAS--LPWRLVSWALPR 628

Query: 126 RSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLP 183
            +    AL LP SL GL SLT+L L +C L   ++P DIG+L  LK L L  N N   L 
Sbjct: 629 PNQTCTALTLPSSLQGLSSLTELSLQNCNL--ESLPIDIGSLSELKKLNLGGNKNLRVLG 686

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV------------------ 225
             +  L  L +L +E+C RL+ + + P N+       C SLV                  
Sbjct: 687 TELCGLLKLNELNVENCGRLEFIQEFPKNMRSFCATNCKSLVRTPDVSMFERAPNMILTN 746

Query: 226 --TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEI 283
              LL    L K  C+      ++++ G + L+       LE  S      S+ V G+++
Sbjct: 747 CCALLEVCGLDKLECST-----NIRMAGCSNLSTDFRMSLLEKWSGDGLG-SLCVAGNQL 800

Query: 284 PKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HV---PKHSTGIRRFYRYPHPAH 339
           PK   +      +T   P+   N N ++G     +F H+     HS  +R   R     H
Sbjct: 801 PKCLHFFTTHPPLTFQVPNI--NNNILLGLTIFAIFTHLITDINHSPSLRIINRTSSRTH 858

Query: 340 V-----LHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPA 394
           +     LH        H    H+W ++LP    YC            L+  D+ E H P 
Sbjct: 859 IYRMLGLHYDSLNIHAH----HIWAIHLPFSYGYC------------LNPGDDIELHIPN 902

Query: 395 GSGTGLKV 402
            +  G+++
Sbjct: 903 ANAYGVRL 910


>gi|408537086|gb|AFU75196.1| nematode resistance-like protein, partial [Solanum tuberosum subsp.
           andigenum]
          Length = 307

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 138/228 (60%), Gaps = 9/228 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL L  T + E+P S+E LSG+  + L  CK+L  LPS+I  LK LKTL++ GC 
Sbjct: 71  MNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +NL + +G +  LEZL  + TAI+  PSS+ L+KNLK LS  GCN         L   
Sbjct: 131 XLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSMSLLKNLKXLSLSGCNA--------LSSQ 182

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           ++          +   +LSGL SL  LDLSDC + +G J S++G L SL+ L L  NNF 
Sbjct: 183 VSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGJLSNLGFLXSLEILILBGNNFS 242

Query: 181 TLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +P ASI+ L  L+ LKL  C RL+SLP+LPP+++ +  N C SL+++
Sbjct: 243 NIPAASISRLTRLKSLKLXXCGRLESLPELPPSIKGIYANECTSLMSI 290


>gi|296089409|emb|CBI39228.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 187/436 (42%), Gaps = 98/436 (22%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            MECL +L L  T IKE+P SIE L+ L  + L   KNL  LPS+I  LK L+ LNL GC 
Sbjct: 738  MECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVESKNLRSLPSSICRLKFLEKLNLYGCS 797

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E   E +  +E L++LD+SGT+I+  PSSI  + +L +     C    S  S      
Sbjct: 798  HLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYCTNLRSLPS------ 851

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                            S+ GL SLTKL LS         P+ +      + L+LSKNN  
Sbjct: 852  ----------------SIGGLKSLTKLSLS-------GRPNRVT-----EQLFLSKNNIH 883

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
             +P+ I+ L NLE L +  CK L+ +P LP ++ ++  +GC  L TL             
Sbjct: 884  HIPSVISQLCNLECLDISHCKMLEEIPDLPSSLREIDAHGCTGLGTLSSPSS-------- 935

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTR 300
                          L  S L ++ + V  P     I +  + IP+W ++Q  GS I +  
Sbjct: 936  --------------LLWSSLLKWFKKVETPFEWGRINLGSNGIPRWVLHQEVGSQIRIEL 981

Query: 301  PSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEK-FGHRG------ 353
            P    + +  +G+     F + +    +    R+          +DEK + ++G      
Sbjct: 982  PMNCYHDDHFLGFG---FFCLYEPVVDLNLSLRFDE-------DLDEKAYAYKGASWCEC 1031

Query: 354  -------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGL-----K 401
                   SD +W++Y P+ +    +    +SN +         KH  A     +      
Sbjct: 1032 HDINSSESDEVWVVYCPKIA----IGDKLQSNQY---------KHLHASFDACIIDCSKN 1078

Query: 402  VKRCGFHPGYMHEVEE 417
            +K CG H  Y  + ++
Sbjct: 1079 IKSCGIHLVYSQDYQQ 1094



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 15/222 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L EL L  T +K +P SIE L+ L +L L+ CKNL  LPS+I  LKSL+ L+L GC 
Sbjct: 596 MEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCS 655

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             E   E +  +E L EL++S T I+  P SI  + +L  L  + C    S     LP  
Sbjct: 656 NLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRS-----LPSS 710

Query: 121 INLMRRSSDLGALMLPSL-------SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           I  ++   +L      +L         +  L KLDLS   + E  +PS I  L+ L ++ 
Sbjct: 711 ICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKE--LPSSIEYLNHLTSMR 768

Query: 174 LSKN-NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           L ++ N  +LP+SI  L  LEKL L  C  L++ P++  ++E
Sbjct: 769 LVESKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDME 810



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 129/261 (49%), Gaps = 22/261 (8%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+ L L    I E+P SI  L+ L  L+++GC+NL  LPS+I  LKSL+ L+L GC    
Sbjct: 528 LKRLYLHSIAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLG 587

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
              E +  +E L EL++SGT ++  PSSI  + +L  L  R C    S     LP  I  
Sbjct: 588 TFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRS-----LPSSIWR 642

Query: 124 MRRSSDLGALMLPSL-------SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS- 175
           ++   +L      +L         +  L +L+LS   + E  +P  IG L+ L  L L  
Sbjct: 643 LKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKE--LPPSIGYLNHLTFLGLQC 700

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA-LKLR 234
             N  +LP+SI  L +LE+L L  C  L+  P++  N+E      C   + L G  +K  
Sbjct: 701 CQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIMENME------CLIKLDLSGTHIKEL 754

Query: 235 KSSCTIIDFVDSLKLLGKNGL 255
            SS   ++ + S++L+    L
Sbjct: 755 PSSIEYLNHLTSMRLVESKNL 775



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 26/207 (12%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           +  L QL ++ C+ L ++ S+I  LK L  LNL GC K  +L  T+  + SL+ L +   
Sbjct: 477 MPNLEQLNIELCEKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSI 536

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
           AI   PSSI  +  L+TLS RGC    S  S                      S+  L S
Sbjct: 537 AIDELPSSIHHLTQLQTLSIRGCENLRSLPS----------------------SICRLKS 574

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
           L +LDL  C    G  P  + N+  L  L LS  +   LP+SI  L +L +L+L  CK L
Sbjct: 575 LEELDLYGCS-NLGTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNL 633

Query: 204 QSLPQ---LPPNVEKVRVNGCASLVTL 227
           +SLP       ++E++ + GC++L T 
Sbjct: 634 RSLPSSIWRLKSLEELDLFGCSNLETF 660


>gi|449470346|ref|XP_004152878.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1074

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 188/428 (43%), Gaps = 65/428 (15%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +  +  SI  L  L  + L+ C NL  LP++I +L SL+T  + GC K + L + +G 
Sbjct: 584 TALSSLHPSIGQLCKLHLINLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGH 643

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPI---NLMR 125
           +ESL  L    TAI   P SI  +K L  LS  GCN   G  SSAS  LP+ +    L R
Sbjct: 644 LESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGCNCRSGSGSSAS--LPWRLVSWALPR 701

Query: 126 RSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLP 183
            +    AL LP SL GL SLT+L L +C L   ++P DIG+L  LK L L  N N   L 
Sbjct: 702 PNQTCTALTLPSSLQGLSSLTELSLQNCNL--ESLPIDIGSLSELKKLNLGGNKNLRVLG 759

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV------------------ 225
             +  L  L +L +E+C RL+ + + P N+       C SLV                  
Sbjct: 760 TELCGLLKLNELNVENCGRLEFIQEFPKNMRSFCATSCKSLVRTPDVSMFERAPNMILTN 819

Query: 226 --TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEI 283
              LL    L K  C+      ++++ G + L+       LE  S      S+ V G+++
Sbjct: 820 CCALLEVCGLDKLECST-----NIRMAGCSNLSTDFRMSLLEKWSGDGLG-SLCVAGNQL 873

Query: 284 PKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HV---PKHSTGIRRFYRYPHPAH 339
           PK   +      +T   P+   N N ++G     +F H+     HS  +R   R     H
Sbjct: 874 PKCLHFFTTHPPLTFQVPN--INNNILLGLTIFAIFTHLITDINHSPSLRIINRTSSRTH 931

Query: 340 V-----LHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPA 394
           +     LH        H    H+W ++LP    YC            L+  D+ E H P 
Sbjct: 932 IYRMLGLHYDSLNIHAH----HIWAIHLPFSYGYC------------LNPGDDIELHIPN 975

Query: 395 GSGTGLKV 402
            +  G+++
Sbjct: 976 ANAYGVRL 983


>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1400

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 158/299 (52%), Gaps = 41/299 (13%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L + + + E+P SI  L  L +L L GC +LV LP +I +L +LKTLNL GC   
Sbjct: 1030 LQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSL 1089

Query: 63   ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G + +L++LD+SG +++   PSSI  + NLK L   GC     S+   LP   
Sbjct: 1090 VELPSSIGNL-NLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGC-----SSLVELPL-- 1141

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
                           S+  L +L +L LS+C      +PS IGNL +L+ LYLS+ ++ V
Sbjct: 1142 ---------------SIGNLINLQELYLSECS-SLVELPSSIGNLINLQELYLSECSSLV 1185

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
             LP+SI  L NL+KL L  C +L SLPQLP ++  +    C SL TL  +     +    
Sbjct: 1186 ELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSF---PNPQVW 1242

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ-NEGSSITV 298
            + F+D  KL  K        R+ +   S  ++    ++PG E+P +F Y+   G S+ V
Sbjct: 1243 LKFIDCWKLNEKG-------RDIIVQTSTSNYT---MLPGREVPAFFTYRATTGGSLAV 1291



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 126/232 (54%), Gaps = 31/232 (13%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + + E+PLSI  L  L +L L  C +LV LPS+I +L +LKTLNL  C     L  ++G 
Sbjct: 895  SSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGN 954

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            + +L+EL +S  +++   PSSI  + NLK L   GC     S+   LP            
Sbjct: 955  LINLQELYLSECSSLVELPSSIGNLINLKKLDLSGC-----SSLVELPL----------- 998

Query: 131  GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
                  S+  L +L  L+LS+C      +PS IGNL +L+ LYLS+ ++ V LP+SI  L
Sbjct: 999  ------SIGNLINLKTLNLSECS-SLVELPSSIGNLINLQELYLSECSSLVELPSSIGNL 1051

Query: 190  FNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASLVTL---LGALKLRK 235
             NL+KL L  C  L  LP       N++ + ++GC+SLV L   +G L L+K
Sbjct: 1052 INLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKK 1103



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 32/255 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  +L D + + E+P SI   + +  L ++GC +L++LPS+I +L +L  L+L+GC    
Sbjct: 719 LEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLV 778

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPF 119
            L  ++G + +L  LD+ G +++   PSSI  + NL+   F GC+     PSS    +  
Sbjct: 779 ELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISL 838

Query: 120 PINLMRRSSDL----------------------GALMLP-SLSGLGSLTKLDLSDCGLGE 156
            I  ++R S L                        + LP S+  L +L KLDLS C    
Sbjct: 839 KILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCS-SL 897

Query: 157 GAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---N 212
             +P  IGNL +L+ LYLS+ ++ V LP+SI  L NL+ L L +C  L  LP       N
Sbjct: 898 VELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLIN 957

Query: 213 VEKVRVNGCASLVTL 227
           ++++ ++ C+SLV L
Sbjct: 958 LQELYLSECSSLVEL 972


>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
          Length = 1398

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 158/299 (52%), Gaps = 41/299 (13%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L + + + E+P SI  L  L +L L GC +LV LP +I +L +LKTLNL GC   
Sbjct: 1028 LQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSL 1087

Query: 63   ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G + +L++LD+SG +++   PSSI  + NLK L   GC     S+   LP   
Sbjct: 1088 VELPSSIGNL-NLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGC-----SSLVELPL-- 1139

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
                           S+  L +L +L LS+C      +PS IGNL +L+ LYLS+ ++ V
Sbjct: 1140 ---------------SIGNLINLQELYLSECS-SLVELPSSIGNLINLQELYLSECSSLV 1183

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
             LP+SI  L NL+KL L  C +L SLPQLP ++  +    C SL TL  +     +    
Sbjct: 1184 ELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSF---PNPQVW 1240

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ-NEGSSITV 298
            + F+D  KL  K        R+ +   S  ++    ++PG E+P +F Y+   G S+ V
Sbjct: 1241 LKFIDCWKLNEKG-------RDIIVQTSTSNYT---MLPGREVPAFFTYRATTGGSLAV 1289



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 126/232 (54%), Gaps = 31/232 (13%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + + E+PLSI  L  L +L L  C +LV LPS+I +L +LKTLNL  C     L  ++G 
Sbjct: 893  SSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGN 952

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            + +L+EL +S  +++   PSSI  + NLK L   GC     S+   LP            
Sbjct: 953  LINLQELYLSECSSLVELPSSIGNLINLKKLDLSGC-----SSLVELPL----------- 996

Query: 131  GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
                  S+  L +L  L+LS+C      +PS IGNL +L+ LYLS+ ++ V LP+SI  L
Sbjct: 997  ------SIGNLINLKTLNLSECS-SLVELPSSIGNLINLQELYLSECSSLVELPSSIGNL 1049

Query: 190  FNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASLVTL---LGALKLRK 235
             NL+KL L  C  L  LP       N++ + ++GC+SLV L   +G L L+K
Sbjct: 1050 INLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKK 1101



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 32/255 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  +L D + + E+P SI   + +  L ++GC +L++LPS+I +L +L  L+L+GC    
Sbjct: 717 LEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLV 776

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPF 119
            L  ++G + +L  LD+ G +++   PSSI  + NL+   F GC+     PSS    +  
Sbjct: 777 ELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISL 836

Query: 120 PINLMRRSSDL----------------------GALMLP-SLSGLGSLTKLDLSDCGLGE 156
            I  ++R S L                        + LP S+  L +L KLDLS C    
Sbjct: 837 KILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCS-SL 895

Query: 157 GAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---N 212
             +P  IGNL +L+ LYLS+ ++ V LP+SI  L NL+ L L +C  L  LP       N
Sbjct: 896 VELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLIN 955

Query: 213 VEKVRVNGCASLVTL 227
           ++++ ++ C+SLV L
Sbjct: 956 LQELYLSECSSLVEL 970


>gi|224089412|ref|XP_002335049.1| predicted protein [Populus trichocarpa]
 gi|222832778|gb|EEE71255.1| predicted protein [Populus trichocarpa]
          Length = 679

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 174/376 (46%), Gaps = 54/376 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L L +T IKE+P SI+ L+ L  L + GC  L  LP     ++SL  LNL    
Sbjct: 283 MESLEYLGLSETGIKELPSSIQSLTRLRDLDMSGCSKLESLPEITVPMESLVELNLSKTG 342

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             E    +   + SL+ L + GT ++  PSSI  +  L++L   GC+   S     +P  
Sbjct: 343 IKEIPSISFKHMTSLKILKLDGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPEITVP-- 400

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                               + SL +L+LS  G+ E  +P  I ++  LK L L      
Sbjct: 401 --------------------MESLAELNLSKTGIKE--LPLSIKDMVCLKKLTLEGTPIK 438

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----LGALKLRK 235
            LP SI  +  LE+L L     +++LP+LPP++  +R   C+SL T+     +G L+LR 
Sbjct: 439 ELPLSIKDMVCLEELTLHGTP-IKALPELPPSLRYLRTRDCSSLETVTSIINIGRLQLRW 497

Query: 236 --SSCTIID---FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
             ++C  +D    ++++ L  ++G  I                  +V+PGSEIP+WF  +
Sbjct: 498 DFTNCFKVDQKPLIEAMHLKIQSGEEIPR-----------GGIIEMVLPGSEIPEWFGDK 546

Query: 291 NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIR-----RFYRYPHPAHVLHCSM 345
             GSS+T+  PS   N +Q+ G A C VF +P  S  +      ++    H A      +
Sbjct: 547 GVGSSLTIQLPS---NCHQLKGIAFCLVFLLPLPSRDLYFDVHVKYKNGEHFASRERQVI 603

Query: 346 DEKFGHRGSDHLWLLY 361
               G   SDH+ L Y
Sbjct: 604 SYNLGTCDSDHMILQY 619



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 53/287 (18%)

Query: 4   LRELLLDKTD-IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR + L K+  + E+P  + +   LV L LK C +L  +PS++  L  L+ +NL  C+  
Sbjct: 107 LRTIDLSKSSYLTELP-DLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNL 165

Query: 63  ENLLETVGQV-------------------ESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
            +      +V                   ++++ L + GT+I+  P SI     LK L  
Sbjct: 166 RSFPMLYSKVLRKLSIYQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSI--TGKLKVLDL 223

Query: 104 RGCNGPPSSASCYLPFPINLMRRSSDLGALML---------PSLSGLGSLTKLDLSDCGL 154
            GC       S    FP      S D+  L L          S+  L  L +L+++ C  
Sbjct: 224 WGC-------SKMTKFP----EVSGDIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSK 272

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
            E ++P     + SL+ L LS+     LP+SI  L  L  L +  C +L+SLP++   +E
Sbjct: 273 LE-SLPEITVPMESLEYLGLSETGIKELPSSIQSLTRLRDLDMSGCSKLESLPEITVPME 331

Query: 215 KVRVNGCASLVTL-LGALKLRKSSCTIIDFVDSLKLLGKNGLAISML 260
                   SLV L L    +++        + SLK+L  +G  +  L
Sbjct: 332 --------SLVELNLSKTGIKEIPSISFKHMTSLKILKLDGTPLKEL 370


>gi|358347701|ref|XP_003637894.1| Elongation factor Ts [Medicago truncatula]
 gi|355503829|gb|AES85032.1| Elongation factor Ts [Medicago truncatula]
          Length = 1319

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 159/372 (42%), Gaps = 60/372 (16%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
            E+  SI LL  LV L L+ C NLV +P+NI  L SLK LN+ GC K   L++     E  
Sbjct: 671  ELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSK---LMKPGISSEKK 727

Query: 76   EELDISGTAIRC-PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
             + DI  +   C   SS+F     K   F      P++AS   P                
Sbjct: 728  NKHDIRESTSHCRSTSSVF-----KLFIF------PNNASFSAPVT----------HTYK 766

Query: 135  LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            LP    L  L  +D+S C L    +P  I  LH L+ L L  NNFVTLP S+  L  L  
Sbjct: 767  LPCFRILYCLRNIDISFCHLSH--VPDAIECLHRLERLNLGGNNFVTLP-SMRKLSRLVY 823

Query: 195  LKLEDCKRLQSLPQLP------PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
            L LE CK L+SLPQLP      P+  +         + +    KL +  C          
Sbjct: 824  LNLEHCKLLESLPQLPFPSTIGPDYHENNEYYWTKGLVIFNCPKLGERECC--------- 874

Query: 249  LLGKNGLAISMLREFLEVVSAPS----HKFSIVVPGSEIPKWFMYQNEGSSITVTR-PSY 303
                + +  S +++F++          ++  IV PGSEIP W   Q+ G SI +   P  
Sbjct: 875  ----SSITFSWMKQFIQANQQSYGPYLYELQIVTPGSEIPSWINNQSMGGSILIDESPVI 930

Query: 304  LCNMNQVVGYAACRVF-HVPKHSTGIR--RFYRYPHPAHVLHCS-----MDEKFGHRGSD 355
              N N ++G+  C VF   P+  T I       Y       +C      +D       S 
Sbjct: 931  HDNKNNIIGFVFCAVFCMAPQDQTMIECLPLSVYMKMGDERNCRKFPVIIDRDLIPTKSS 990

Query: 356  HLWLLYLPRQSY 367
            HLWL+Y PR+ Y
Sbjct: 991  HLWLVYFPREYY 1002


>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1294

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 196/463 (42%), Gaps = 111/463 (23%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +E LR   + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC 
Sbjct: 810  IEVLR---ISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCS 866

Query: 61   KFEN------------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMK 96
              E+                        L E +G + +LE L  S T IR  P SI  + 
Sbjct: 867  VLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLT 926

Query: 97   NLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE 156
             L+ L+       P                   L   + P LS    L  L LS+  + E
Sbjct: 927  RLQVLAIGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE 969

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEK 215
              IP+ IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  
Sbjct: 970  --IPNSIGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLY 1027

Query: 216  VRVNGCASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA 269
            + ++ C SLV++ G        KL  S+C  +D    + L+ +N          L++ SA
Sbjct: 1028 IYIHSCTSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESA 1076

Query: 270  -PSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI 328
             P H +    PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V       
Sbjct: 1077 KPEHSY---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---- 1128

Query: 329  RRFYRYPHPAHVLHCS-------------MDEKF---------GHRGSDHLWLLYLPRQS 366
                 YP     +HCS             MDE +          + GSDHL L      S
Sbjct: 1129 -----YPMNNLKIHCSCILKDADACELVVMDEVWYPDPKAFTNMYFGSDHLLLF-----S 1178

Query: 367  YYCNVKWHFESNHFRLSFMD-EREKHCPAGSGTGLKVKRCGFH 408
              C     +    F  S  + E +   P G     +VK+C  H
Sbjct: 1179 RTCTSMEAYSEALFEFSVENTEGDSFSPLG-----EVKKCAVH 1216



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 719 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 778

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 779 LPDTLQNLTSLETLEVSGC----------------------------------------- 797

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 798 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 848

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 849 VSISELRSLEKLKLSGCSVLESFP 872



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 602 EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 658

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 659 -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIIL-KSLETVGMSGC----SSLKHFP 712

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 713 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 749

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 750 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 797



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 15/215 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI+ L GL    L  C  L  +P  I  LKSL+T+ + GC   ++  E       L
Sbjct: 663 EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-ILKSLETVGMSGCSSLKHFPEISWNTRRL 721

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM- 134
               +S T I   PSSI  +  L  L    C    +  S YL   ++L   + D    + 
Sbjct: 722 Y---LSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPS-YLGHLVSLKSLNLDGCRRLE 777

Query: 135 -LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP +L  L SL  L++S C L     P       S++ L +S+ +   +PA I  L  L
Sbjct: 778 NLPDTLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRISETSIEEIPARICNLSQL 833

Query: 193 EKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
             L + + KRL SLP       ++EK++++GC+ L
Sbjct: 834 RSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 868


>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1295

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 196/463 (42%), Gaps = 111/463 (23%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +E LR   + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC 
Sbjct: 811  IEVLR---ISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCS 867

Query: 61   KFEN------------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMK 96
              E+                        L E +G + +LE L  S T IR  P SI  + 
Sbjct: 868  VLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLT 927

Query: 97   NLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE 156
             L+ L+       P                   L   + P LS    L  L LS+  + E
Sbjct: 928  RLQVLAIGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE 970

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEK 215
              IP+ IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  
Sbjct: 971  --IPNSIGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLY 1028

Query: 216  VRVNGCASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA 269
            + ++ C SLV++ G        KL  S+C  +D    + L+ +N          L++ SA
Sbjct: 1029 IYIHSCTSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESA 1077

Query: 270  -PSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI 328
             P H +    PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V       
Sbjct: 1078 KPEHSY---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---- 1129

Query: 329  RRFYRYPHPAHVLHCS-------------MDEKF---------GHRGSDHLWLLYLPRQS 366
                 YP     +HCS             MDE +          + GSDHL L      S
Sbjct: 1130 -----YPMNNLKIHCSCILKDADACELVVMDEVWYPDPKAFTNMYFGSDHLLLF-----S 1179

Query: 367  YYCNVKWHFESNHFRLSFMD-EREKHCPAGSGTGLKVKRCGFH 408
              C     +    F  S  + E +   P G     +VK+C  H
Sbjct: 1180 RTCTSMEAYSEALFEFSVENTEGDSFSPLG-----EVKKCAVH 1217



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 720 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 779

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 780 LPDTLQNLTSLETLEVSGC----------------------------------------- 798

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 799 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 849

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 850 VSISELRSLEKLKLSGCSVLESFP 873



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 603 EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 659

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 660 -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIIL-KSLETVGMSGC----SSLKHFP 713

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 714 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 750

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 751 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 798



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 15/215 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI+ L GL    L  C  L  +P  I  LKSL+T+ + GC   ++  E       L
Sbjct: 664 EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-ILKSLETVGMSGCSSLKHFPEISWNTRRL 722

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM- 134
               +S T I   PSSI  +  L  L    C    +  S YL   ++L   + D    + 
Sbjct: 723 Y---LSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPS-YLGHLVSLKSLNLDGCRRLE 778

Query: 135 -LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP +L  L SL  L++S C L     P       S++ L +S+ +   +PA I  L  L
Sbjct: 779 NLPDTLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRISETSIEEIPARICNLSQL 834

Query: 193 EKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
             L + + KRL SLP       ++EK++++GC+ L
Sbjct: 835 RSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 869


>gi|224112118|ref|XP_002332830.1| predicted protein [Populus trichocarpa]
 gi|222870202|gb|EEF07333.1| predicted protein [Populus trichocarpa]
          Length = 330

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 115/214 (53%), Gaps = 45/214 (21%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL +L LD+T I E+  SI  + GL  L++  CK L  +  +I  LKSLK L+L GC 
Sbjct: 161 MNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCS 220

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + +N+   + +VESLEE D+SGT+IR  P+SIFL+KNL  LS  G               
Sbjct: 221 ELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDG--------------- 265

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                                       L  C L   A+P DIG L SLK+L LS+NNFV
Sbjct: 266 ----------------------------LRACNLR--ALPEDIGCLSSLKSLDLSRNNFV 295

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           +LP SIN L  LEKL LEDC  L+SL ++P  V+
Sbjct: 296 SLPRSINQLSGLEKLVLEDCTMLESLLEVPSKVQ 329


>gi|357500665|ref|XP_003620621.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495636|gb|AES76839.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1057

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 201/458 (43%), Gaps = 77/458 (16%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL+L +++IK++  + + L  L  L L+  +NL ++  +     +L+ L+L GC    
Sbjct: 607  LVELILTESNIKQLWKNKKYLPNLRTLDLRHSRNLEKI-IDFGEFPNLERLDLEGCINLV 665

Query: 64   NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC----NGP--------- 109
             L  ++G +  L  L++    ++   P++IF + +L+ L+  GC    N P         
Sbjct: 666  ELDPSIGLLRKLVYLNLKDCKSLVSIPNNIFGLSSLQYLNMCGCSKVFNNPRRLMKSGIS 725

Query: 110  ---------PSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
                       SAS +LP  +  +  + D  + MLPSL  L  L K+D+S C L    +P
Sbjct: 726  SEKKQQHDIRESASHHLP-GLKWIILAHD-SSHMLPSLHSLCCLRKVDISFCYLSH--VP 781

Query: 161  SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
              I  LH L+ L L+ N+FVTLP S+  L  L  L LE CK L+SLPQLP       V+ 
Sbjct: 782  DAIECLHWLERLNLAGNDFVTLP-SLRKLSKLVYLNLEHCKLLESLPQLPFPTNTGEVHR 840

Query: 221  ------CASLVTLLGALKL-RKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK 273
                  C + + +    KL  +  C                + +  +++F++     S +
Sbjct: 841  EYDDYFCGAGLLIFNCPKLGEREHC--------------RSMTLLWMKQFIKANPRSSSE 886

Query: 274  FSIVVPGSEIPKWFMYQNEGSSITVTR-PSYLCNMNQVVGYAACRVFHVPKHSTGIRR-- 330
              IV PGSEIP W   Q  G SI + R P    N N ++G   C  F +  +        
Sbjct: 887  IQIVNPGSEIPSWINNQRMGYSIAIDRSPIRHDNDNNIIGIVCCAAFTMAPYREIFYSSE 946

Query: 331  -----FYRYPHPAHVLHCSMDEKFG--HRGSDHLWLLYLPRQ--SYYCNVKWHFESNHFR 381
                 F R      +L   +  K       S HLW++YLPR+   Y C+     E     
Sbjct: 947  LMNLAFKRIDSNERLLKMRVPVKLSLVTTKSSHLWIIYLPREYPGYSCH-----EFGKIE 1001

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFD 419
            L F +            GL+V+ CG+      +++EF+
Sbjct: 1002 LKFFEVE----------GLEVESCGYRWVCKQDIQEFN 1029


>gi|37574597|gb|AAQ93075.1| TIR-NBS-LRR type R protein 7 [Malus baccata]
          Length = 1095

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 33/299 (11%)

Query: 4   LRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL+L +  ++ E+  SI  L  L  + L+ C  L+ LP +    KS++ L L GC   
Sbjct: 667 LEELILYNCKELSEIHPSIGHLKRLSLVNLEWCDKLISLPGDFYKSKSVEALLLNGCLIL 726

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L E +G++ SL  L+   T IR  P SI  +KNL  LS        S  S +LP    
Sbjct: 727 RELHEDIGEMISLRTLEAEYTDIREVPPSIVRLKNLTRLSL------SSVESIHLPH--- 777

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                         SL GL SL +L+LS   L +  IP D+G+L SL+ L L +N+F TL
Sbjct: 778 --------------SLHGLNSLRELNLSSFELADDEIPKDLGSLISLQDLNLQRNDFHTL 823

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
           P S++ L  LE L+L  C++L+++  LP N++ +  NGC +L T+    ++  S+   + 
Sbjct: 824 P-SLSGLSKLETLRLHHCEQLRTITDLPTNLKFLLANGCPALETMPNFSEM--SNIRELK 880

Query: 243 FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRP 301
             DS      N L+  + +  L+  ++      I +  + +P WF + NEG+ +T   P
Sbjct: 881 VSDS-----PNNLSTHLRKNILQGWTSCGFG-GIFLHANYVPDWFEFVNEGTKVTFDIP 933



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 7/154 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L  + TDI+E+P SI  L  L +L+L   ++ + LP +++ L SL+ LN L  F
Sbjct: 736 MISLRTLEAEYTDIREVPPSIVRLKNLTRLSLSSVES-IHLPHSLHGLNSLRELN-LSSF 793

Query: 61  KF--ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
           +   + + + +G + SL++L++        PS   L K L+TL    C    +     LP
Sbjct: 794 ELADDEIPKDLGSLISLQDLNLQRNDFHTLPSLSGLSK-LETLRLHHCEQLRTITD--LP 850

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
             +  +  +       +P+ S + ++ +L +SD 
Sbjct: 851 TNLKFLLANGCPALETMPNFSEMSNIRELKVSDS 884


>gi|297741888|emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 127/249 (51%), Gaps = 29/249 (11%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+     +D+ E+P+ IE    L  L L+ C+NL  LPS+I   KSL TL+  GC + E+
Sbjct: 914  RKCCFKGSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLES 972

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS--------- 111
              E +  +ESL +L ++GTAI+  PSSI  ++ L+ L  R C    N P S         
Sbjct: 973  FPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKT 1032

Query: 112  --SASC--YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
               + C  +   P NL R  S         D     LPSLSGL SL  L L  C L E  
Sbjct: 1033 LVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQGCNLRE-- 1090

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
             PS+I  L SL TL L  N+F  +P  I+ L+NLE L L  CK LQ +P+LP  +  +  
Sbjct: 1091 FPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDA 1150

Query: 219  NGCASLVTL 227
            + C SL  L
Sbjct: 1151 HHCTSLENL 1159



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 133/292 (45%), Gaps = 38/292 (13%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC NL  LP  I   K L+TL+  GC K E   E  G +  L  LD+SGTAI   P
Sbjct: 482 LTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLP 541

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLD 148
           SSI  +  L+TL  + C                       L    +P+ +  L SL +LD
Sbjct: 542 SSITHLNGLQTLLLQEC-----------------------LKLHQIPNHICHLSSLKELD 578

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           L  C + EG IPSDI +L SL+ L L + +F ++P +IN L  LE L L  C  L+ +P+
Sbjct: 579 LGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPE 638

Query: 209 LPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVS 268
           LP  +  +  +G             R SS  +  F+    L+     A  + R      S
Sbjct: 639 LPSRLRLLDAHGSN-----------RTSSRAL--FLPLHSLVNCFSWAQGLKRTSFSDSS 685

Query: 269 APSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
                  IV+P ++ IP+W M + +        P      N+ +G+A C V+
Sbjct: 686 YRGKGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCVY 737



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P++I  L SLK L+L  C 
Sbjct: 524 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCN 583

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  +  L+ L+   CN 
Sbjct: 584 IMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNN 632


>gi|357500581|ref|XP_003620579.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495594|gb|AES76797.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1594

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 159/372 (42%), Gaps = 60/372 (16%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
            E+  SI LL  LV L L+ C NLV +P+NI  L SLK LN+ GC K   L++     E  
Sbjct: 671  ELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSK---LMKPGISSEKK 727

Query: 76   EELDISGTAIRC-PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
             + DI  +   C   SS+F     K   F      P++AS   P                
Sbjct: 728  NKHDIRESTSHCRSTSSVF-----KLFIF------PNNASFSAPVT----------HTYK 766

Query: 135  LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            LP    L  L  +D+S C L    +P  I  LH L+ L L  NNFVTLP S+  L  L  
Sbjct: 767  LPCFRILYCLRNIDISFCHLSH--VPDAIECLHRLERLNLGGNNFVTLP-SMRKLSRLVY 823

Query: 195  LKLEDCKRLQSLPQLP------PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
            L LE CK L+SLPQLP      P+  +         + +    KL +  C          
Sbjct: 824  LNLEHCKLLESLPQLPFPSTIGPDYHENNEYYWTKGLVIFNCPKLGERECC--------- 874

Query: 249  LLGKNGLAISMLREFLEVVSAPS----HKFSIVVPGSEIPKWFMYQNEGSSITVTR-PSY 303
                + +  S +++F++          ++  IV PGSEIP W   Q+ G SI +   P  
Sbjct: 875  ----SSITFSWMKQFIQANQQSYGPYLYELQIVTPGSEIPSWINNQSMGGSILIDESPVI 930

Query: 304  LCNMNQVVGYAACRVF-HVPKHSTGIR--RFYRYPHPAHVLHCS-----MDEKFGHRGSD 355
              N N ++G+  C VF   P+  T I       Y       +C      +D       S 
Sbjct: 931  HDNKNNIIGFVFCAVFCMAPQDQTMIECLPLSVYMKMGDERNCRKFPVIIDRDLIPTKSS 990

Query: 356  HLWLLYLPRQSY 367
            HLWL+Y PR+ Y
Sbjct: 991  HLWLVYFPREYY 1002


>gi|297734799|emb|CBI17033.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 156/352 (44%), Gaps = 40/352 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L +L L +T IKE+P SI  L+ L +L L+ CKNL  LP++I  LKSL  LNL GC 
Sbjct: 100 MGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCS 159

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
                 E +  +E L EL +S T I   P SI  +K L+ L  + C      P S     
Sbjct: 160 NLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLT 219

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +R  S L  L     S    L +LDL+ C L +GAIPSD+  L  L+ L +S+ 
Sbjct: 220 HLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEI 279

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT----------- 226
               +P +I  L NL  L++  C+ L+ +P+LP  +E +   GC  L T           
Sbjct: 280 PIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGTLSTPSSPLWSY 339

Query: 227 LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPK 285
           LL   K R  SC      DSL                        H   +V+PGS  IPK
Sbjct: 340 LLNLFKSRTQSCEYEIDSDSLWYF---------------------HVPKVVIPGSGGIPK 378

Query: 286 WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKH---STGIRRFYRY 334
           W  + + G    +  P      N  +G+A     HVP     S   RRF ++
Sbjct: 379 WISHPSMGRQAIIELPKNRYEDNNFLGFAVF-FHHVPLDDFWSHWHRRFLQF 429



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 28/186 (15%)

Query: 45  INSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFR 104
           ++S+ +L+ LNL+ C + +   E    +  LE + +  + I+  PSSI  +  L+ L+  
Sbjct: 4   LSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLH 63

Query: 105 GCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG 164
            C         +  FP N                   G+L  L + +    +     +I 
Sbjct: 64  YCRN-------FDKFPDNF------------------GNLRHLRVINANRTDIKELPEIH 98

Query: 165 NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGC 221
           N+ SL  L+L +     LP SI  L  LE+L LE+CK L+SLP     ++ + V   NGC
Sbjct: 99  NMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGC 158

Query: 222 ASLVTL 227
           ++LV  
Sbjct: 159 SNLVAF 164


>gi|225460020|ref|XP_002269704.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1156

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 156/352 (44%), Gaps = 40/352 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L +L L +T IKE+P SI  L+ L +L L+ CKNL  LP++I  LKSL  LNL GC 
Sbjct: 663 MGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCS 722

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
                 E +  +E L EL +S T I   P SI  +K L+ L  + C      P S     
Sbjct: 723 NLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLT 782

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +R  S L  L     S    L +LDL+ C L +GAIPSD+  L  L+ L +S+ 
Sbjct: 783 HLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEI 842

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT----------- 226
               +P +I  L NL  L++  C+ L+ +P+LP  +E +   GC  L T           
Sbjct: 843 PIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGTLSTPSSPLWSY 902

Query: 227 LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPK 285
           LL   K R  SC      DSL                        H   +V+PGS  IPK
Sbjct: 903 LLNLFKSRTQSCEYEIDSDSLWYF---------------------HVPKVVIPGSGGIPK 941

Query: 286 WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKH---STGIRRFYRY 334
           W  + + G    +  P      N  +G+A     HVP     S   RRF ++
Sbjct: 942 WISHPSMGRQAIIELPKNRYEDNNFLGFAVF-FHHVPLDDFWSHWHRRFLQF 992



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 33/230 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME +  +  D +  KEM    ++L  L  + L   + L ++P  ++S+ +L+ LNL+ C 
Sbjct: 528 MEQVEVISYDLSRSKEM----QILGNLKIIDLSRSRLLTKMPE-LSSMPNLEELNLVCCE 582

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + +   E    +  LE + +  + I+  PSSI  +  L+ L+   C         +  FP
Sbjct: 583 RLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRN-------FDKFP 635

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            N                   G+L  L + +    +     +I N+ SL  L+L +    
Sbjct: 636 DNF------------------GNLRHLRVINANRTDIKELPEIHNMGSLTKLFLIETAIK 677

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTL 227
            LP SI  L  LE+L LE+CK L+SLP     ++ + V   NGC++LV  
Sbjct: 678 ELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAF 727


>gi|224127750|ref|XP_002329168.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870949|gb|EEF08080.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1018

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 196/455 (43%), Gaps = 84/455 (18%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
            E+  SI+ L  L  L L GCKNL  +P  I S K L+ L+L  C K     E  G    L
Sbjct: 582  EVHSSIQHLEKLEILILSGCKNLGIVPKRIES-KFLRILDLSHCKKVRKCPEISGY---L 637

Query: 76   EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-----------------------PPSS 112
            EEL + GTAI   P SI  +K ++ L   GC+                         PSS
Sbjct: 638  EELMLQGTAIEELPQSISKVKEIRILDLSGCSNITKFPQIPGNIKQLRLLWTVIEEVPSS 697

Query: 113  ASCYLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDC------------------- 152
                    +  M     L +L  P+ +  L  L +L+LS C                   
Sbjct: 698  IEFLATLGVLEMNFCEQLSSL--PTCICKLKCLERLELSYCPKLESFPEILEPMESLKCL 755

Query: 153  ---GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
               G     +PS I  L  L  L L++ +N V+LP+ I  L  L+ LKL  CK L SLP+
Sbjct: 756  DLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVSLPSFIEKLPVLKYLKLNYCKSLLSLPE 815

Query: 209  LPPNVEKVRVNGCASLVTL-LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVV 267
            LPP+VE +   GC SL TL +G    ++S+   ++F +  KL  K  LA + ++    + 
Sbjct: 816  LPPSVEFLEAVGCESLETLSIG----KESNFWYLNFANCFKLDQKPLLADTQMK----IQ 867

Query: 268  SAPSHK-FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHST 326
            S    +  +I++PGSEIP WF  Q+ GSS+ +  P+   N +Q  G+A   VF  P   T
Sbjct: 868  SGKMRREVTIILPGSEIPGWFCDQSMGSSVAIKLPT---NCHQHNGFAFGMVFVFPDPPT 924

Query: 327  GIR-----------RFYRYPHPAHVLHCSM-DEKFGHRGSDHLWLLYLPRQSYYCNVKWH 374
             ++           R     H   + + S    +     SD + LLY P +    +    
Sbjct: 925  ELQCNRIFICECHARGENDEHHDVIFNLSTCAYELRSVESDQMLLLYNPCEFVKRDCISQ 984

Query: 375  FESNHFRLSF-MDEREKHCPAGSGTGLKVKRCGFH 408
            +        F +DE     P+G     KVKRCG +
Sbjct: 985  YSGKEISFEFYLDE-----PSGLQNRCKVKRCGVY 1014



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 65/118 (55%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +++L L  T I+E+P SIE L+ L  L +  C+ L  LP+ I  LK L+ L L  C K E
Sbjct: 681 IKQLRLLWTVIEEVPSSIEFLATLGVLEMNFCEQLSSLPTCICKLKCLERLELSYCPKLE 740

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
           +  E +  +ESL+ LD+SGTAI+  PSSI  +  L  L    C+   S  S     P+
Sbjct: 741 SFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVSLPSFIEKLPV 798



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 41/76 (53%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L+ L L  T IKE+P SI+ LS L  L L  C NLV LPS I  L  LK L L  C 
Sbjct: 749 MESLKCLDLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVSLPSFIEKLPVLKYLKLNYCK 808

Query: 61  KFENLLETVGQVESLE 76
              +L E    VE LE
Sbjct: 809 SLLSLPELPPSVEFLE 824


>gi|224111080|ref|XP_002332990.1| predicted protein [Populus trichocarpa]
 gi|222834667|gb|EEE73130.1| predicted protein [Populus trichocarpa]
          Length = 881

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 214/485 (44%), Gaps = 87/485 (17%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ++CL +L L   + +  +P +I+ L  L +L L GC  L  LP +I+ LK L  L+L GC
Sbjct: 398 LKCLAKLHLTGCSGLASVPDNIDRLKSLAKLHLSGCSGLASLPDSIDRLKCLDMLHLSGC 457

Query: 60  FKFENLLETV----GQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
               +L +++    G ++SL+ L +SG + +   P  I  +K+LK+L+  GC+G  S   
Sbjct: 458 LGLASLPDSIDDNIGALKSLKWLHLSGCSGLASLPDRIGELKSLKSLNLNGCSGLAS--- 514

Query: 115 CYLPFPINLMRRSSDLGALMLPSL----SGLGSLTKLDLSDC------------------ 152
             LP  I  ++    L    L SL     GL  LT L+LS C                  
Sbjct: 515 --LPNNIGALKSLKLLHLSGLESLPDNIGGLRCLTMLNLSGCFKLASLPDSIGALKLLCT 572

Query: 153 -----GLGEGAIPSDIGNLHSLKTLYLSKN---------------NFVTLPASINCLFNL 192
                  G  ++P  IG L  L TL LS+                +F  +PASI  L  L
Sbjct: 573 LHLIGCSGLKSLPESIGELKRLTTLDLSERLGSLVSLTQLRLSQIDFERIPASIKQLTKL 632

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL------------KLRKSSCTI 240
            KL L+DCK+LQ LP+LP  ++ +  +GC SL ++                +   S C  
Sbjct: 633 SKLYLDDCKQLQCLPELPSTLQVLIASGCISLKSVASIFMQGDREYKAVSQEFNFSECLQ 692

Query: 241 IDFVDSLKLLGKNGLAISMLREFL---EVVSAPSHKFSIVVPGSEIPKWFMYQN-EGSSI 296
           +D     +++G   L I  +   L   E    P  +  + +PGSE+ + F Y+N EGSS+
Sbjct: 693 LDQNSHFRIMGAAHLRIRRMATSLFYQEYAGNPLKEVRLCIPGSEVLERFSYKNREGSSV 752

Query: 297 TVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHV-LHCSMDEKFGHRG-- 353
            + +P++        G+  C V  V    +G RR      P ++   C +  K G +   
Sbjct: 753 KIRQPAHWHR-----GFTLCAV--VSFGQSGERR------PVNIKCECHLISKDGTQIDL 799

Query: 354 SDHLWLLYLPR-QSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYM 412
           S + + +Y  + +S +        S H +  F  E      +  G    V  CG HP ++
Sbjct: 800 SSYYYEIYEEKVRSLWGREHVFIWSVHSK-CFFKEASFQFKSPWGATDVVVGCGVHPLFV 858

Query: 413 HEVEE 417
           +E E+
Sbjct: 859 NEPEQ 863



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 46/262 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI +L  L Q  L GC  L  LP+NI++LKSLK+L+L GC    +L  ++G ++SL++LD
Sbjct: 243 SIGMLKSLDQFDLNGCSRLASLPNNIDALKSLKSLHLSGCSGLVSLPNSIGVLKSLDQLD 302

Query: 80  ISGTA--------IRCPPSSIFLMKNLKTLSFRGCNGPPS-------------------S 112
           +S  +        +      I   K++K L   GC+G  S                   S
Sbjct: 303 LSDCSRLASLPDRLASLLDKIGEFKSMKLLKLHGCSGLASLLDNIGELKSLTSLNLSGCS 362

Query: 113 ASCYLPFPINLMRRSSDL---GAL----MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
           +   LP  I +++    L   G L    +L S+ GL  L KL L+ C  G  ++P +I  
Sbjct: 363 SLESLPDSIGMLKSLYQLDLSGCLRLESLLESIGGLKCLAKLHLTGCS-GLASVPDNIDR 421

Query: 166 LHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ-LPPNVEKVR------ 217
           L SL  L+LS  +   +LP SI+ L  L+ L L  C  L SLP  +  N+  ++      
Sbjct: 422 LKSLAKLHLSGCSGLASLPDSIDRLKCLDMLHLSGCLGLASLPDSIDDNIGALKSLKWLH 481

Query: 218 VNGCASLVTL---LGALKLRKS 236
           ++GC+ L +L   +G LK  KS
Sbjct: 482 LSGCSGLASLPDRIGELKSLKS 503



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 38/254 (14%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAI 85
           LVQL +  C  L +L  N   LKSLK+LNL GC    +L  ++G ++SL++ D++G + +
Sbjct: 204 LVQLEMP-CSQLEQL-RNEGMLKSLKSLNLHGCSGLASLTHSIGMLKSLDQFDLNGCSRL 261

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG-------------- 131
              P++I  +K+LK+L   GC+G  S     LP  I +++    L               
Sbjct: 262 ASLPNNIDALKSLKSLHLSGCSGLVS-----LPNSIGVLKSLDQLDLSDCSRLASLPDRL 316

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
           A +L  +    S+  L L  C  G  ++  +IG L SL +L LS  ++  +LP SI  L 
Sbjct: 317 ASLLDKIGEFKSMKLLKLHGCS-GLASLLDNIGELKSLTSLNLSGCSSLESLPDSIGMLK 375

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVT-------LLGALKLRKSSC-- 238
           +L +L L  C RL+SL +    ++   K+ + GC+ L +       L    KL  S C  
Sbjct: 376 SLYQLDLSGCLRLESLLESIGGLKCLAKLHLTGCSGLASVPDNIDRLKSLAKLHLSGCSG 435

Query: 239 --TIIDFVDSLKLL 250
             ++ D +D LK L
Sbjct: 436 LASLPDSIDRLKCL 449



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 34/241 (14%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + ++ +P SI +L  L QL L GC  L  L  +I  LK L  L+L GC    ++ + + +
Sbjct: 362 SSLESLPDSIGMLKSLYQLDLSGCLRLESLLESIGGLKCLAKLHLTGCSGLASVPDNIDR 421

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++SL +L +SG + +   P SI  +K L  L   GC G  S     LP  I+      ++
Sbjct: 422 LKSLAKLHLSGCSGLASLPDSIDRLKCLDMLHLSGCLGLAS-----LPDSID-----DNI 471

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
           GAL         SL  L LS C  G  ++P  IG L SLK+L L+  +   +LP +I  L
Sbjct: 472 GALK--------SLKWLHLSGCS-GLASLPDRIGELKSLKSLNLNGCSGLASLPNNIGAL 522

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
            +L+         L  L  LP N+  +R   C +++ L G  KL     ++ D + +LKL
Sbjct: 523 KSLKL------LHLSGLESLPDNIGGLR---CLTMLNLSGCFKL----ASLPDSIGALKL 569

Query: 250 L 250
           L
Sbjct: 570 L 570


>gi|113205407|gb|ABI34381.1| Leucine Rich Repeat family protein [Solanum demissum]
          Length = 487

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 134/315 (42%), Gaps = 80/315 (25%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           +L   + I+E+P SI+ L+ L +L L G KNL  LPS+I  LK L TLN+  C K ++L 
Sbjct: 120 ILSANSGIRELPSSIQYLTHLTELDLSGMKNLEALPSSIVKLKGLVTLNVSYCSKIKSLP 179

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E +G +E+LE LD + T I  PPSS+  +  LK+L F                       
Sbjct: 180 EEIGDLENLEGLDATFTLISRPPSSVVRLNKLKSLKF----------------------- 216

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                                 LS     +G IP DIG L SLK L L  +NF  LP SI
Sbjct: 217 ----------------------LSSSNFIDGRIPEDIGYLSSLKGLLLQGDNFEHLPQSI 254

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG-----CASLVTLLGALKLRKSSCTII 241
             L  L  L L +CKRL  LP+ PP ++ +  +      C SL   + + +   S+    
Sbjct: 255 AQLGALRVLYLVNCKRLTQLPEFPPQLDTICADWHNDLICNSLFQNISSFQHDISAS--- 311

Query: 242 DFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRP 301
              DSL            LR F                GS IP WF +Q    S++V   
Sbjct: 312 ---DSLS-----------LRVF-------------TSSGSNIPSWFHHQGMDKSVSVNLH 344

Query: 302 SYLCNMNQVVGYAAC 316
                 +  +G+A C
Sbjct: 345 ENWYVSDNFLGFAVC 359


>gi|147782877|emb|CAN67859.1| hypothetical protein VITISV_009855 [Vitis vinifera]
          Length = 1383

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 178/436 (40%), Gaps = 115/436 (26%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME LR L LD+T IKE+P SIE L GL  LTL  C NLV LP +I +L SL+ L++  C 
Sbjct: 996  MENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCP 1055

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             F+ L + +G+++SL  L +                +L +++F+                
Sbjct: 1056 NFKKLPDNLGRLQSLLHLRVG---------------HLDSMNFQ---------------- 1084

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                          LPSLSGL SL  L L  C + E  IPS+I +L SL+ L L+ N+F 
Sbjct: 1085 --------------LPSLSGLCSLGTLMLHACNIRE--IPSEIFSLSSLERLCLAGNHFS 1128

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
             +P  I+ L+NL  L L  CK LQ +P+LP  V + ++      V  +   K R  +   
Sbjct: 1129 RIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR----VIFVQGCKYRNVT--- 1181

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTR 300
                                              + +   + IP+W  +Q  G  IT+  
Sbjct: 1182 ----------------------------------TFIAESNGIPEWISHQKSGFKITMKL 1207

Query: 301  PSYLCNMNQVVGYAACRVFHVPKHSTGIR--------------RFYRYPHPAHVLHCSMD 346
            P      +  +G   C +  VP     +                ++          C  D
Sbjct: 1208 PWSWYENDDFLGVVLCSLI-VPLEIETVTYGCFICKLNFDDDGEYFICERAQFCQCCYDD 1266

Query: 347  EKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
            +    +   +    Y+P++ Y+ N +W   +  F +S+ D +           +KV RCG
Sbjct: 1267 DASSQQCMMYYSKSYIPKR-YHSN-EWRTLNASFNVSYFDLKP----------VKVARCG 1314

Query: 407  FHPGYMHEVEEFDETT 422
            F   Y H+ E+  E T
Sbjct: 1315 FRFLYAHDYEQNVEDT 1330



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 50/218 (22%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L ELLL  ++IK++    +L   L  + L    +L+R+P + +S+ +L+ L L G     
Sbjct: 535 LVELLLRNSNIKQLWRGSKLHDKLRVIDLSYSVHLIRIP-DFSSVPNLEILTLEG----- 588

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
                               +IR  PSSI  +  L+TL  + C                 
Sbjct: 589 --------------------SIRDLPSSITHLNGLQTLLLQEC----------------- 611

Query: 124 MRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                 L    +P+ +  L SL +LDL  C + EG IPSDI +L SL+ L L + +F ++
Sbjct: 612 ------LKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 665

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
           P +IN L  LE L L  C  L+ +P+LP  +  +  +G
Sbjct: 666 PTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHG 703


>gi|351727991|ref|NP_001235644.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452593|gb|ACM89623.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 1552

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 162/350 (46%), Gaps = 71/350 (20%)

Query: 35   CKNLVRLPSNINSLKSLKTLNLLGCFKFEN--LLETVGQVESLEELDISGTAIRCPPSSI 92
            CKNLV LP++I  L SL+ LNL GC K  N  LL  +   E L+++DI G  I    +S 
Sbjct: 1202 CKNLVSLPNSILGLNSLEDLNLSGCSKLYNTELLYELRDAEQLKKIDIDGAPIHFQSTSS 1261

Query: 93   FLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
            +  ++ K            S SC +P        SS +   ML          KLDLS C
Sbjct: 1262 YSREHKK------------SVSCLMP--------SSPIFPCML----------KLDLSFC 1291

Query: 153  GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP- 211
             L E  IP  IG +  L+ L LS NNF TLP ++  L  L  LKL+ CK+L+SLP+LP  
Sbjct: 1292 NLVE--IPDAIGIMCCLQRLDLSGNNFATLP-NLKKLSKLVCLKLQHCKQLKSLPELPSR 1348

Query: 212  --NVEKVRVNG-----CASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
              N +++R  G     C  LV         +  CT + F  +++        +  L  F 
Sbjct: 1349 IYNFDRLRQAGLYIFNCPELVD--------RERCTDMAFSWTMQ-----SCQVLYLCPFY 1395

Query: 265  EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKH 324
                   H   +V PGSEIP+WF  ++EG+ +++     + + N  +G A C +F VP  
Sbjct: 1396 -------HVSRVVSPGSEIPRWFNNEHEGNCVSLDASPVMHDHNW-IGVAFCAIFVVPHE 1447

Query: 325  STGIRRFYR----YPHPAHV---LHCSMDEKFGHRGSDHLWLLYLPRQSY 367
            +     F      YP    +    +  +D +     SDH+WL ++ R  +
Sbjct: 1448 TLSAMSFSETEGNYPDYNDIPVDFYEDVDLELVLDKSDHMWLFFVGRGRF 1497


>gi|147856257|emb|CAN79645.1| hypothetical protein VITISV_033789 [Vitis vinifera]
          Length = 1025

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 189/434 (43%), Gaps = 63/434 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME LR L L+KT IKE+P SI+ L+ L  L L GCKNLV LP +I  L  L+ L++  C 
Sbjct: 257 MENLRVLHLNKTAIKELPSSIKHLNRLEVLNLNGCKNLVTLPESICDLCFLEVLDVGYCS 316

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K   L + +G+++SL+ L   G  +  C   S+  + +L+ L   G              
Sbjct: 317 KLHKLPQNLGRLQSLKHLRACGLNSTCCQLLSLSGLCSLEKLILHG-------------- 362

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                  S  +   +L  +  L SL  L+LS C + EG IP++I +L SL+ L L  N F
Sbjct: 363 -------SKLMQGEILSDICCLYSLEVLNLSCCSIDEGGIPTEICHLSSLRQLLLIGNLF 415

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
            ++P  +N L  L  L L  C+ L+ +P LP ++  + V+GC  L T  G L     +C 
Sbjct: 416 RSIPXGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHGCTRLDTSSGLLWSSLFNC- 474

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS----IVVPGSEIPKWFMYQNEGSS 295
                             S++++F   +     +F+    I+     +PKW  +  +G+ 
Sbjct: 475 ----------------FKSVIQDFECKIYPREKRFTRVNLIISVSCGMPKWISHHKKGAK 518

Query: 296 ITVTRPSYLCNMNQVVGYAACRVFHVPKHST-----GIRRFYRY--PHPAHVLHCSMDEK 348
           +    P      N ++G+    ++    + +         +++Y      H +    + +
Sbjct: 519 VVAKLPQNWYKNNDLLGFVLYSLYDPLDNESEETLENDATYFKYGLTLRGHKIQFVDELQ 578

Query: 349 F-----GHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
           F      +     +W+ Y P+      +   + SN +R          C    G  +KV+
Sbjct: 579 FYPSCQCYDVVPKMWMTYYPK----VEIVKKYPSNKWR----QLTASFCGFSRGKAMKVE 630

Query: 404 RCGFHPGYMHEVEE 417
            CG H  Y H+ E+
Sbjct: 631 ECGIHLIYAHDHEK 644



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 1/102 (0%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R+L L    I E+P +IE    L  L L+ CKNL RLPS+I   KSL TL   GC    +
Sbjct: 666 RKLCLKGNAINELP-TIECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRS 724

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
             E +  VE+L EL + GTAI   P+SI  ++ L+ L+   C
Sbjct: 725 FPEILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDC 766



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 112/288 (38%), Gaps = 51/288 (17%)

Query: 137 SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
           S+    SLT L  S C  G  + P  + ++ +L+ L+L       LPASI  L  L+ L 
Sbjct: 704 SICEFKSLTTLFCSGCS-GLRSFPEILEDVENLRELHLDGTAIEELPASIQYLRGLQYLN 762

Query: 197 LEDCKRLQSL--PQLPPNVEKVRVNGCASLVT------LLGALKLRKSSCTIIDFVDSLK 248
           L DC  L  L  P+LPP++  + V+    L T      LLG    +    TI +F     
Sbjct: 763 LSDCTDLGLLQAPELPPSLRYLDVHSLTCLETLSSPSSLLGVFLFKCFKSTIEEF----- 817

Query: 249 LLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNM 307
                           E  S       +V+ G+  IP+W   Q +GS IT+  P      
Sbjct: 818 ----------------ECGSYWDKAIGVVISGNNGIPEWISQQKKGSQITIELPMDWYRK 861

Query: 308 NQVVGYAACRVFHVPKHSTGIR-RFYRYPHPAHVLHCSMDEKF------GHRGSDHLWLL 360
           +  +G+A    F +P    G+          +   H   D +F      G   S  + + 
Sbjct: 862 DDFLGFALYSAF-IPMACDGLNCELNICGDQSECCHVD-DVRFYCCEICGE--SSQMCVT 917

Query: 361 YLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFH 408
           Y P+ +   N  W  E    + SF         +  GT ++VK  GFH
Sbjct: 918 YYPKVAID-NQYWSNEWRRLKASFR--------SFDGTPVEVKEWGFH 956



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 14/87 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPS----------NINSLKS 50
           +E LREL LD T I+E+P SI+ L GL  L L  C +L  L +          +++SL  
Sbjct: 732 VENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDLGLLQAPELPPSLRYLDVHSLTC 791

Query: 51  LKTL----NLLGCFKFENLLETVGQVE 73
           L+TL    +LLG F F+    T+ + E
Sbjct: 792 LETLSSPSSLLGVFLFKCFKSTIEEFE 818


>gi|240256011|ref|NP_193686.5| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658792|gb|AEE84192.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 161/338 (47%), Gaps = 38/338 (11%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            E +  L L+ T I+ +   IE L  L+ L LK C+ L  LP+++  LKSL+ L L GC  
Sbjct: 724  ESIESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSA 783

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             E+L     ++E LE L + GT+I+  P  +  + NLK  SF       S+    LPF  
Sbjct: 784  LESLPPIKEKMECLEILLMDGTSIKQTPE-MSCLSNLKICSFCRPVIDDSTGLVVLPF-- 840

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                             SG   L+ L L++C + +  +P    +L SL+ L LS+NN  T
Sbjct: 841  -----------------SGNSFLSDLYLTNCNIDK--LPDKFSSLRSLRCLCLSRNNIET 881

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL---RKSSC 238
            LP SI  L++L  L L+ C RL+SLP LP N++ +  +GC SL  +   L +    +   
Sbjct: 882  LPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYLDAHGCGSLENVSKPLTIPLVTERMH 941

Query: 239  TIIDFVDSLKL---LGKNGLAISMLREFLEVVSAPSHK---------FSIVVPGSEIPKW 286
            T   F D  KL     ++ +A + L+  L   ++  H           ++  PG +IP W
Sbjct: 942  TTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHNHKGLLLDPLVAVCFPGHDIPSW 1001

Query: 287  FMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKH 324
            F +Q  GS I      + CN ++ +G + C V     H
Sbjct: 1002 FSHQKMGSLIETDLLPHWCN-SKFIGASLCVVVTFKDH 1038


>gi|451798982|gb|AGF69189.1| TMV resistance protein N-like protein 3 [Vitis labrusca]
          Length = 1524

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 135/294 (45%), Gaps = 36/294 (12%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+  T+ GC NL  LP NI  LK L+ L+  GC K E   E  G +  L  LD+SGTAI 
Sbjct: 656 LIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 715

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             PSSI  +  L+TL  + C       S     PI++                 L SL  
Sbjct: 716 DLPSSITHLNGLQTLLLQEC-------SKLHKIPIHICH---------------LSSLEV 753

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           LDL  C + EG IPSDI +L SL+ L L + +F ++P +IN L +LE L L  C  L+ +
Sbjct: 754 LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQI 813

Query: 207 PQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEV 266
            +LP            S + LL A    ++S +   F+    L+     A          
Sbjct: 814 TELP------------SCLRLLDAHGSNRTS-SRAPFLPLHSLVNCFRWAQDWKHTSFRD 860

Query: 267 VSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            S       IV+PGS+ IP+W + + +  S  +  P      N+ +G+A C V+
Sbjct: 861 SSYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIELPQNWHQNNEFLGFAICCVY 914



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 95/191 (49%), Gaps = 29/191 (15%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+     +D+ E+P+    L  L  L L+ CKNL  LPS+I   KSL TL+  GC + E+
Sbjct: 1090 RKCCFKGSDMNEVPIIGNPLE-LDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLES 1148

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS--------- 111
            + E +  +ESL +L +SGTAI+  PSSI  ++ L+ L    C    N P S         
Sbjct: 1149 IPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKF 1208

Query: 112  ----SASCYLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
                S   +   P NL R  S         D     LPSLSGL SL +L+L  C + E  
Sbjct: 1209 LIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACNIRE-- 1266

Query: 159  IPSDIGNLHSL 169
            IPS+I  L SL
Sbjct: 1267 IPSEICYLSSL 1277



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 138/358 (38%), Gaps = 65/358 (18%)

Query: 137  SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
            S+ G  SL  L  S C   E +IP  + ++ SL+ L LS      +P+SI  L  L+ L 
Sbjct: 1128 SIFGFKSLATLSCSGCSQLE-SIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLL 1186

Query: 197  LEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL---LGALK-LRKSSCTIIDFVD---- 245
            L +CK L +LP+   N+  ++   V  C S   L   LG L+ L   S   +D ++    
Sbjct: 1187 LSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMNFQLP 1246

Query: 246  ------SLKLLGKNGLAISMLREFLEVVSAPSHKF-----SIVVPGSEIPKWFMYQNEGS 294
                  SL+ L      I  +   +  +S+   +F     +     + IP+W  +Q  G 
Sbjct: 1247 SLSGLCSLRQLELQACNIREIPSEICYLSSLGREFRRSVRTFFAESNGIPEWISHQKSGF 1306

Query: 295  SITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY---------------RYPHPAH 339
             IT+  P      +  +G+  C ++   +  T   R +                      
Sbjct: 1307 KITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLEQ 1366

Query: 340  VLHCSMDEKFGHRGSDHLWLLYLPR----QSYYCNVKWHFESNHFRLSFMDEREKHCPAG 395
            +  C   E   ++G     L+Y  +    + ++ N +W   +  F + F           
Sbjct: 1367 ICECCYYEDASNQG----LLVYYSKSDIPEKFHSN-EWRTLNASFNVYF----------- 1410

Query: 396  SGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGS 453
                +K  RCGFH  Y H+ E+ + T  Q +  +       H D  G   AV   NG+
Sbjct: 1411 GIKPVKAARCGFHFLYAHDYEQNNLTMVQGSSSS-------HVDLGGHRSAVQDTNGT 1461



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 1/108 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P +I  L SL+ L+L  C 
Sbjct: 701 MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCN 760

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
             E  + + +  + SL++L++        P++I  + +L+ L+   CN
Sbjct: 761 IMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCN 808


>gi|296086469|emb|CBI32058.3| unnamed protein product [Vitis vinifera]
          Length = 1344

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 35/289 (12%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            SI  +  L+ L L  CKNLV  PS+++ LK+L+TL L GC K + L E +  ++SL EL 
Sbjct: 858  SIGDIISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELL 917

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA------L 133
            + GT I   P S+  +  L+ LS   C+            P+N +  S  LGA      +
Sbjct: 918  LDGTVIEKLPESVLRLTRLERLSLNNCH------------PVNELPASIVLGAEENSELI 965

Query: 134  MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            +LP S S L  L +LD     +  G IP D   L SL+ L L +NNF +LP+S+  L  L
Sbjct: 966  VLPTSFSNLSLLYELDARAWKIS-GKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSIL 1024

Query: 193  EKLKLEDCKRLQSLPQLPPNVEKVRVNGC------ASLVTLLGALKLRKSSC-TIIDF-- 243
             KL L  C+ L++LP LP ++ +V    C      + L  L    +L  ++C  ++D   
Sbjct: 1025 RKLLLPHCEELKALPPLPSSLMEVNAANCYALEVISDLSNLESLQELNLTNCKKLVDIPG 1084

Query: 244  ---VDSLKLLGKNGLA--ISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
               + SLK    +G +   S ++  L  V+  + + ++ +PGS IP WF
Sbjct: 1085 VECLKSLKGFFMSGCSSCSSTVKRRLSKVALKNLR-TLSIPGSNIPDWF 1132



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 17/183 (9%)

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           NL+ + +    ++L S S L  L +LD     +  G+I SD   L SL+ L L  NNF +
Sbjct: 18  NLILQENPKPVVLLMSFSNLFMLKELDARAWKIS-GSI-SDFEKLSSLEDLNLGHNNFCS 75

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--VTLLGALK----LRK 235
           LP+S+  L  L+ L L  CK + SLP LP ++ K+ V+ C +L  V+ L  LK    L  
Sbjct: 76  LPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSNCCALQSVSDLSNLKSLEDLNL 135

Query: 236 SSC-TIIDF-----VDSLKLLGKNG--LAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
           ++C  I+D      + SLK    +G    +  L+  +  V A  H +++ VPGSEIP WF
Sbjct: 136 TNCKKIMDIPGLQCLKSLKRFYASGCNACLPALKSRITKV-ALKHLYNLSVPGSEIPNWF 194

Query: 288 MYQ 290
           + +
Sbjct: 195 VQE 197



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 23/171 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-----------------KNLVRLPS 43
            M+ LRELLLD T I+++P S+  L+ L +L+L  C                   L+ LP+
Sbjct: 910  MKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCHPVNELPASIVLGAEENSELIVLPT 969

Query: 44   NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
            + ++L  L  L+         + +   ++ SLE L++        PSS+  +  L+ L  
Sbjct: 970  SFSNLSLLYELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLL 1029

Query: 104  RGCNGPPSSASCYLPFPINLMR-RSSDLGAL-MLPSLSGLGSLTKLDLSDC 152
              C           P P +LM   +++  AL ++  LS L SL +L+L++C
Sbjct: 1030 PHC----EELKALPPLPSSLMEVNAANCYALEVISDLSNLESLQELNLTNC 1076


>gi|359493220|ref|XP_002264441.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1481

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 133/296 (44%), Gaps = 45/296 (15%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L LKGC+NL  LP +I   K L+TL+   C K +   E  G +  L ELD+SGTAI   P
Sbjct: 671 LILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELP 730

Query: 90  SSIFL--MKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
           SS     +K LK LSF  C   N  P    C                         L SL
Sbjct: 731 SSSSFEHLKALKILSFNRCSKLNKIPIDVCC-------------------------LSSL 765

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
             LDLS C + EG IPSDI  L SLK L L  N+F ++PA+IN L  L+ L L  C+ L+
Sbjct: 766 EVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLE 825

Query: 205 SLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
            +P+LP ++  +  +G            L  S+ + + F   +         +S    + 
Sbjct: 826 HVPELPSSLRLLDAHGP----------NLTLSTASFLPFHSLVNCFNSKIQDLSWSSCYY 875

Query: 265 EVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
              +       IV+P S  +P+W M Q   + +    P      N+ +G+A C V+
Sbjct: 876 SDSTYRGKGICIVLPRSSGVPEWIMDQRSETEL----PQNCYQNNEFLGFAICCVY 927



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 3/117 (2%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L +L LD + IKE+P SI+ L GL  L L  C+NLV LP +I +L SLKTL +  C 
Sbjct: 1156 MEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCP 1215

Query: 61   KFENLLETVGQVESLEEL---DISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
            + + L E +G+++SLE L   D      + P  S F+ +N   +     NG P   S
Sbjct: 1216 ELKKLPENLGRLQSLESLHVKDFDSMNCQLPSLSEFVQRNKVGIFLPESNGIPEWIS 1272



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 24/172 (13%)

Query: 3    CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            C R      +D++E+P+ IE    L  L L+ C+NL  LP++I   K LKT +  GC + 
Sbjct: 1088 CRRGGCFKDSDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQL 1146

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            E+  E +  +E LE+L++ G+AI+  PSSI  ++ L+ L+   C              +N
Sbjct: 1147 ESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRN-----------LVN 1195

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            L     +L +L   +++    L KL            P ++G L SL++L++
Sbjct: 1196 LPESICNLTSLKTLTITSCPELKKL------------PENLGRLQSLESLHV 1235



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 117/273 (42%), Gaps = 67/273 (24%)

Query: 58   GCFKFENLLETVGQVESLEELDISGTAIR-CP-----PSSIFLMKNLKTLSFRGCNGPPS 111
            GCFK  ++ E +  +E+  ELD  G  +R C      P+SI   K LKT S  GC+   S
Sbjct: 1092 GCFKDSDMQE-LPIIENPLELD--GLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLES 1148

Query: 112  SASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   FP                 L  +  L KL+L    + E  IPS I  L  L+ 
Sbjct: 1149 -------FP---------------EILEDMEILEKLELDGSAIKE--IPSSIQRLRGLQD 1184

Query: 172  LYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA 230
            L L+   N V LP SI  L +L+ L +  C  L+ LP+                   LG 
Sbjct: 1185 LNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPEN------------------LGR 1226

Query: 231  LKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMY 289
            L+    S  + DF DS+         +  L EF++      +K  I +P S  IP+W  +
Sbjct: 1227 LQ-SLESLHVKDF-DSM------NCQLPSLSEFVQ-----RNKVGIFLPESNGIPEWISH 1273

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
            Q +GS IT+T P      +  +G+A C + HVP
Sbjct: 1274 QKKGSKITLTLPQNWYENDDFLGFALCSL-HVP 1305



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 1   MECLRELLLDKTDIKEMP--LSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG 58
           M  LREL L  T I+E+P   S E L  L  L+   C  L ++P ++  L SL+ L+L  
Sbjct: 713 MRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSY 772

Query: 59  CFKFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
           C   E  + + + ++ SL+EL++     R  P++I  +  L+ L+   C  
Sbjct: 773 CNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQN 823


>gi|359477821|ref|XP_003632029.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1510

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 135/294 (45%), Gaps = 36/294 (12%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+  T+ GC NL  LP NI  LK L+ L+  GC K E   E  G +  L  LD+SGTAI 
Sbjct: 642 LIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 701

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             PSSI  +  L+TL  + C       S     PI++                 L SL  
Sbjct: 702 DLPSSITHLNGLQTLLLQEC-------SKLHKIPIHICH---------------LSSLEV 739

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           LDL  C + EG IPSDI +L SL+ L L + +F ++P +IN L +LE L L  C  L+ +
Sbjct: 740 LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQI 799

Query: 207 PQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEV 266
            +LP            S + LL A    ++S +   F+    L+     A          
Sbjct: 800 TELP------------SCLRLLDAHGSNRTS-SRAPFLPLHSLVNCFRWAQDWKHTSFRD 846

Query: 267 VSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            S       IV+PGS+ IP+W + + +  S  +  P      N+ +G+A C V+
Sbjct: 847 SSYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIELPQNWHQNNEFLGFAICCVY 900



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 95/191 (49%), Gaps = 29/191 (15%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+     +D+ E+P+    L  L  L L+ CKNL  LPS+I   KSL TL+  GC + E+
Sbjct: 1076 RKCCFKGSDMNEVPIIGNPLE-LDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLES 1134

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS--------- 111
            + E +  +ESL +L +SGTAI+  PSSI  ++ L+ L    C    N P S         
Sbjct: 1135 IPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKF 1194

Query: 112  ----SASCYLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
                S   +   P NL R  S         D     LPSLSGL SL +L+L  C + E  
Sbjct: 1195 LIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACNIRE-- 1252

Query: 159  IPSDIGNLHSL 169
            IPS+I  L SL
Sbjct: 1253 IPSEICYLSSL 1263



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 138/358 (38%), Gaps = 65/358 (18%)

Query: 137  SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
            S+ G  SL  L  S C   E +IP  + ++ SL+ L LS      +P+SI  L  L+ L 
Sbjct: 1114 SIFGFKSLATLSCSGCSQLE-SIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLL 1172

Query: 197  LEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL---LGALK-LRKSSCTIIDFVD---- 245
            L +CK L +LP+   N+  ++   V  C S   L   LG L+ L   S   +D ++    
Sbjct: 1173 LSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMNFQLP 1232

Query: 246  ------SLKLLGKNGLAISMLREFLEVVSAPSHKF-----SIVVPGSEIPKWFMYQNEGS 294
                  SL+ L      I  +   +  +S+   +F     +     + IP+W  +Q  G 
Sbjct: 1233 SLSGLCSLRQLELQACNIREIPSEICYLSSLGREFRRSVRTFFAESNGIPEWISHQKSGF 1292

Query: 295  SITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYR---------------YPHPAH 339
             IT+  P      +  +G+  C ++   +  T   R +                      
Sbjct: 1293 KITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLEQ 1352

Query: 340  VLHCSMDEKFGHRGSDHLWLLYLPR----QSYYCNVKWHFESNHFRLSFMDEREKHCPAG 395
            +  C   E   ++G     L+Y  +    + ++ N +W   +  F + F           
Sbjct: 1353 ICECCYYEDASNQG----LLVYYSKSDIPEKFHSN-EWRTLNASFNVYF----------- 1396

Query: 396  SGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGS 453
                +K  RCGFH  Y H+ E+ + T  Q +  +       H D  G   AV   NG+
Sbjct: 1397 GIKPVKAARCGFHFLYAHDYEQNNLTMVQGSSSS-------HVDLGGHRSAVQDTNGT 1447



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 1/108 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P +I  L SL+ L+L  C 
Sbjct: 687 MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCN 746

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
             E  + + +  + SL++L++        P++I  + +L+ L+   CN
Sbjct: 747 IMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCN 794


>gi|224131070|ref|XP_002328446.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838161|gb|EEE76526.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1272

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 152/326 (46%), Gaps = 57/326 (17%)

Query: 10   DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
            D   +  +P SI  L  L+ L L  C  L  LP +I  LKSL  L L GC +   L   +
Sbjct: 848  DSIGLASLPDSIGELKSLIWLYLSSCLGLESLPDSICELKSLSYLYLQGCSRLATLPNKI 907

Query: 70   GQVESLEELDISG-TAIRCPPSSI-----FLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            G+++SL++L + G + +   P++I      L  N+  L FRG +       CY+      
Sbjct: 908  GELKSLDKLCLEGCSGLASLPNNICSGLASLPNNIIYLEFRGLD----KQCCYM------ 957

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG-------EGA----IPSDIGNLHSLKTL 172
                          LSG   + ++ LS   LG       E +     P  +G+L SL  L
Sbjct: 958  --------------LSGFQKVEEIALSTNKLGCHEFLNLENSRVLKTPESLGSLVSLTQL 1003

Query: 173  YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----- 227
             LSK +F  +PASI  L +L  L L+DCK LQ LP+LP  ++ +  +GC SL ++     
Sbjct: 1004 TLSKIDFERIPASIKHLTSLHNLYLDDCKWLQCLPELPLTLQVLIASGCISLKSVASIFM 1063

Query: 228  -------LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE---FLEVVSAPSHKFSIV 277
                     + +   S C  +D     +++G   L I  +      LE    P  +  + 
Sbjct: 1064 QGDREYKAASQEFNFSECLQLDQNSRTRIMGAARLRIQRMATSLFSLEYHGKPLKEVRLC 1123

Query: 278  VPGSEIPKWFMYQN-EGSSITVTRPS 302
            +PGSE+P+WF Y+N EGSS+ + +P+
Sbjct: 1124 IPGSEVPEWFSYKNREGSSVKIWQPA 1149



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 120/246 (48%), Gaps = 21/246 (8%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D + +  +P SI  L  L +L LKGC  L  LP +I  LKSL +L L  C     L +++
Sbjct: 647 DCSGLASLPNSIGELKSLTKLNLKGCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSI 706

Query: 70  GQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           G+++SL+ L + G + +   P SI  +K+L +L  RGC+G  S     LP  I  ++   
Sbjct: 707 GELKSLDSLYLGGCSGLATLPESIGELKSLDSLYLRGCSGLAS-----LPDSIGELKSLD 761

Query: 129 DL------GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
            L      G   LP S+  L SL  L L  C  G   +P  IG L SL +LYL   +   
Sbjct: 762 SLYLGGCSGLATLPDSIGELKSLDSLYLRGCS-GLATLPDSIGELKSLDSLYLGGCSGLA 820

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQ------LPPNVEKVRVNGCASLVTLLGALKLR 234
           +LP SI  L +L+ L L  C  L SLP       LP ++ +++      L + LG   L 
Sbjct: 821 SLPNSIGELKSLDSLYLRGCSGLASLPDSIGLASLPDSIGELKSLIWLYLSSCLGLESLP 880

Query: 235 KSSCTI 240
            S C +
Sbjct: 881 DSICEL 886



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 25/240 (10%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D + +  +P SI  L  L  L L GC  L  LP +I  LKSL +L L GC    +L +
Sbjct: 693 LKDCSGLATLPDSIGELKSLDSLYLGGCSGLATLPESIGELKSLDSLYLRGCSGLASLPD 752

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           ++G+++SL+ L + G + +   P SI  +K+L +L  RGC+G  +     LP  I  ++ 
Sbjct: 753 SIGELKSLDSLYLGGCSGLATLPDSIGELKSLDSLYLRGCSGLAT-----LPDSIGELKS 807

Query: 127 SSDL------GALMLP-SLSGLGSLTKLDLSDC--------GLGEGAIPSDIGNLHSLKT 171
              L      G   LP S+  L SL  L L  C         +G  ++P  IG L SL  
Sbjct: 808 LDSLYLGGCSGLASLPNSIGELKSLDSLYLRGCSGLASLPDSIGLASLPDSIGELKSLIW 867

Query: 172 LYLSKN-NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTL 227
           LYLS      +LP SI  L +L  L L+ C RL +LP       +++K+ + GC+ L +L
Sbjct: 868 LYLSSCLGLESLPDSICELKSLSYLYLQGCSRLATLPNKIGELKSLDKLCLEGCSGLASL 927



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 114/231 (49%), Gaps = 39/231 (16%)

Query: 33  KGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEEL---DISGTAIRCPP 89
           K C  L  LP++I  LKSL  LNL GC +   L +++G+++SL+ L   D SG A    P
Sbjct: 646 KDCSGLASLPNSIGELKSLTKLNLKGCSRLATLPDSIGELKSLDSLYLKDCSGLATL--P 703

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
            SI  +K+L +L   GC+G  +     LP  I  ++    L +L L   SGL SL     
Sbjct: 704 DSIGELKSLDSLYLGGCSGLAT-----LPESIGELK---SLDSLYLRGCSGLASL----- 750

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
                     P  IG L SL +LYL   +   TLP SI  L +L+ L L  C  L +LP 
Sbjct: 751 ----------PDSIGELKSLDSLYLGGCSGLATLPDSIGELKSLDSLYLRGCSGLATLPD 800

Query: 209 LP---PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLA 256
                 +++ + + GC+ L +L  ++   KS       +DSL L G +GLA
Sbjct: 801 SIGELKSLDSLYLGGCSGLASLPNSIGELKS-------LDSLYLRGCSGLA 844


>gi|110741819|dbj|BAE98852.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 703

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 41/299 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L + + + E+P SI  L  L +L L GC +LV LP +I +L +LKTLNL GC   
Sbjct: 333 LQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSL 392

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L  ++G + +L++LD+SG +++   PSSI  + NLK L   GC     S+   LP   
Sbjct: 393 VELPSSIGNL-NLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGC-----SSLVELPL-- 444

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
                          S+  L +L +L LS+C      +PS IGNL +L+ LYLS+ ++ V
Sbjct: 445 ---------------SIGNLINLQELYLSECS-SLVELPSSIGNLINLQELYLSECSSLV 488

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            LP+SI  L NL+KL L  C +L SLPQLP ++  +    C SL TL  +    +     
Sbjct: 489 ELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFPNPQ---VW 545

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ-NEGSSITV 298
           + F+D  KL  K        R+ +   S  ++     +PG E+P +F Y+   G S+ V
Sbjct: 546 LKFIDCWKLNEKG-------RDIIVQTSTSNYTM---LPGREVPAFFTYRATTGGSLAV 594



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 126/232 (54%), Gaps = 31/232 (13%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + + E+PLSI  L  L +L L  C +LV LPS+I +L +LKTLNL  C     L  ++G 
Sbjct: 198 SSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGN 257

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + +L+EL +S  +++   PSSI  + NLK L   GC     S+   LP            
Sbjct: 258 LINLQELYLSECSSLVELPSSIGNLINLKKLDLSGC-----SSLVELPL----------- 301

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
                 S+  L +L  L+LS+C      +PS IGNL +L+ LYLS+ ++ V LP+SI  L
Sbjct: 302 ------SIGNLINLKTLNLSECS-SLVELPSSIGNLINLQELYLSECSSLVELPSSIGNL 354

Query: 190 FNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASLVTL---LGALKLRK 235
            NL+KL L  C  L  LP       N++ + ++GC+SLV L   +G L L+K
Sbjct: 355 INLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKK 406



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 32/255 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  +L D + + E+P SI   + +  L ++GC +L++LPS+I +L +L  L+L+GC    
Sbjct: 22  LEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLV 81

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPF 119
            L  ++G + +L  LD+ G +++   PSSI  + NL+   F GC+     PSS    +  
Sbjct: 82  ELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISL 141

Query: 120 PINLMRRSSDL----------------------GALMLP-SLSGLGSLTKLDLSDCGLGE 156
            I  ++R S L                        + LP S+  L +L KLDLS C    
Sbjct: 142 KILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCS-SL 200

Query: 157 GAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---N 212
             +P  IGNL +L+ LYLS+ ++ V LP+SI  L NL+ L L +C  L  LP       N
Sbjct: 201 VELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLIN 260

Query: 213 VEKVRVNGCASLVTL 227
           ++++ ++ C+SLV L
Sbjct: 261 LQELYLSECSSLVEL 275


>gi|357474623|ref|XP_003607596.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508651|gb|AES89793.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1039

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 185/434 (42%), Gaps = 75/434 (17%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L+   D  E+P        L  L L GC NL+ +P++I  L SLK LNL GC K  N   
Sbjct: 642  LIKLPDFGEVP-------NLEMLNLAGCVNLISIPNSIFVLTSLKYLNLSGCSKVFNY-- 692

Query: 68   TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
                 + L++LD S T +     +  L+  L T+            S Y      L+ R 
Sbjct: 693  ----PKHLKKLDSSETVLHSQSKTSSLI--LTTIGLH---------SLYQNAHKGLVSR- 736

Query: 128  SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
                  +L SL     L +LD+S CGL +  IP  IG +  L  L LS NNFVTLP S+ 
Sbjct: 737  ------LLSSLPSFFFLRELDISFCGLSQ--IPDAIGCIRWLGRLVLSGNNFVTLP-SLR 787

Query: 188  CLFNLEKLKLEDCKRLQSLPQLP-PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
             L  L  L L+ CK+L  LP+LP P+   V  N    L          +  C+ +     
Sbjct: 788  ELSKLVYLDLQYCKQLNFLPELPLPHSSTVGQNCVVGLYIFNCPELGERGHCSRMTLSWL 847

Query: 247  LKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCN 306
            ++ L  N  + +    FLE          IV+PGSEIP+W   Q+ G+S+++   S + +
Sbjct: 848  IQFLHANQESFAC---FLET------DIGIVIPGSEIPRWLNNQSLGNSMSINLSS-IVH 897

Query: 307  MNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRG------------- 353
                +G  AC VF V      I          + +  S+DE     G             
Sbjct: 898  DKDFIGLVACVVFSVKLDYPNITT----NELENNICISLDEDHTRTGYGFNFSCPVICYA 953

Query: 354  ------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
                  SDH WLLYLP      +  +    +    +F+DERE       G   +VK+CG+
Sbjct: 954  DLFTPESDHTWLLYLPWDRLNPDKTFRGFDHITMTTFIDERE-------GLHGEVKKCGY 1006

Query: 408  HPGYMHEVEEFDET 421
               +  + ++F+ T
Sbjct: 1007 RCIFKQDQQQFNST 1020


>gi|357497293|ref|XP_003618935.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355493950|gb|AES75153.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 431

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 183/427 (42%), Gaps = 74/427 (17%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ--VE 73
           E+  S+ LL  LV L +K C NL+R+P+NI  L SLK LN+ GC K  +    + +  + 
Sbjct: 42  ELDPSLGLLRKLVYLNVKDCGNLIRIPNNIFGLSSLKDLNMCGCSKLFDDSRHLKKPDIS 101

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
           S ++ DIS +A     S  F+ +   T+       P  +A  YL                
Sbjct: 102 SKKKHDISESASH-SRSMPFVFE--WTMLLHNSLFPAPTALTYL---------------- 142

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
            L SL  L  L ++D+S C L +  +P  I  L  L+ L L   +F TLP S+  L  L 
Sbjct: 143 -LHSLRSLYCLREVDISYCHLSQ--LPDTIECLRWLERLNLGGIDFATLP-SLRKLSKLV 198

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLR------KSSCTIIDFVDSL 247
            L LE C+ L+ LPQLP +      +      +  G +         K  C+ + F    
Sbjct: 199 YLNLEHCRLLEFLPQLPFSNTIEWAHNENKFFSTTGLVIFNCPELSDKEHCSSMTF---- 254

Query: 248 KLLGKNGLAISMLREFLEVVSAPSH--KFSIVVPGSEIPKWFMYQNEGSSITVT-RPSYL 304
                     S + +F++  + PSH  +  IV PG EIP W   ++   SI +   P   
Sbjct: 255 ----------SWMMQFIQA-NPPSHFDRIQIVTPGIEIPSWINNRSVDGSIPIDLTPIMH 303

Query: 305 CNMNQVVGYAACRVFHVPKHSTGIRRFYRY-----PHPAHVLHCSMDEKFGH-----RGS 354
            N N ++G+  C VF +     G     R      P  +H + C   +   +       S
Sbjct: 304 DNNNNIIGFVCCAVFSMAPRGEGFSSPARMELVFDPIDSHKISCMRVQVILNGFLVLTKS 363

Query: 355 DHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE 414
            HLW++YLPR+SY    K HF+                  G G  +KVK CG+      +
Sbjct: 364 SHLWIIYLPRESYDEFGKIHFD---------------IIRGEGLDMKVKTCGYRWVCKQD 408

Query: 415 VEEFDET 421
           ++EF+ T
Sbjct: 409 LQEFNLT 415


>gi|255537139|ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223549535|gb|EEF51023.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 184/434 (42%), Gaps = 43/434 (9%)

Query: 13   DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +++ MP S      L  L +  C  L  LPS+I  LKSL++L+L GC   ++  E +  +
Sbjct: 662  NLRSMP-STTRWKSLSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSNLQSFPEILESM 720

Query: 73   ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS--SASCYLPFPINLMRRSSDL 130
            + L+ L ++GTAI+  PSSI  +K L ++    C        + C L     L       
Sbjct: 721  DRLKVLVLNGTAIKELPSSIERLKGLSSIYLENCRNLAHLPESFCNLKALYWLFLTFCPK 780

Query: 131  GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
               +   LS L +L  L +  C L +  +PS + +L  +  L LS N F  LP S   L 
Sbjct: 781  LEKLPEKLSNLTTLEDLSVGVCNLLK--LPSHMNHLSCISKLDLSGNYFDQLP-SFKYLL 837

Query: 191  NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLL 250
            NL  L +  C+RL+SLP++P ++  +  + C SL T+ G  ++ +   T   +   +   
Sbjct: 838  NLRCLDISSCRRLRSLPEVPHSLTDIDAHDCRSLETISGLKQIFQLKYTHTFYDKKIIFT 897

Query: 251  GKNGLAISMLREFL----------EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT- 299
                +  S   +FL           + +     FSI  PGS+IPKWF YQ+EGSSI +  
Sbjct: 898  SCFKMDESAWSDFLADAQFWIQKVAMRAKDEESFSIWYPGSKIPKWFGYQSEGSSIVIQL 957

Query: 300  RPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY-------------RYPHPAHVL----H 342
             P    + + ++G+  C V            F+              Y     V     H
Sbjct: 958  HPR--SHKHNLLGFTLCVVLAFEDEFEYHNSFFDVLCVYQLKNYRGEYTDCKEVYSSRTH 1015

Query: 343  CSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKV 402
             S   K+   GSDH+ L Y P  ++          N     F  +  + C   S     V
Sbjct: 1016 VSGKNKY--VGSDHVILFYDP--NFSSTEANELSYNEASFEFYWQNNESCCMQSSM---V 1068

Query: 403  KRCGFHPGYMHEVE 416
            K+C   P Y  E E
Sbjct: 1069 KKCAAIPLYSREEE 1082


>gi|296089378|emb|CBI39197.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 184/428 (42%), Gaps = 64/428 (14%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T+++++  S+  LS L+ L L+ C NL  LPS I  L SL+TL L GC K E L E    
Sbjct: 96  TNLRKVHPSLGYLSKLILLNLENCTNLEHLPS-IRWLVSLETLILSGCSKLEKLPEVPQH 154

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +  L +L + GTAI           +    S  G N   +S +      +N    S D  
Sbjct: 155 MPYLSKLCLDGTAI----------TDFSGWSELG-NFQENSGNLDCLNELN----SDDST 199

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
              LPS S +        S       +I      L SL  L LS  + + LP ++  LF 
Sbjct: 200 IRQLPSSSVVLRNHNASPSSAPRRSHSIRPHC-TLTSLTYLNLSGTSIIRLPWNLERLFM 258

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT-------------LLG-ALKLRKSS 237
           L++L+L +C+RLQ+LP LP ++E++  + C SL               L G   KLR   
Sbjct: 259 LQRLELTNCRRLQALPVLPSSIERMNASNCTSLELVSPQSVFKRFGGFLFGNCFKLRNCH 318

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
             +   V S+      G   S    +   V  P   FS V PGSEIP WF + ++G  I 
Sbjct: 319 SKMEHDVQSVASHVVPGAWRSTYASWHPNVGIP---FSTVFPGSEIPDWFRHHSQGHEIN 375

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPH-PAHVLH------CSMDEKFG 350
           +  P      +  +G+A   V   P+H +  R +Y Y     H L+      CS    + 
Sbjct: 376 IEVPPDWYINSNFLGFALSAVM-APQHDS--RAWYMYCDLDTHDLNSNSHRICSFFGSWT 432

Query: 351 HR------GSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKR 404
           ++       SDH+WL Y+P    +   KW    +H + SF           S  G  VK 
Sbjct: 433 YQLQHTPIESDHVWLAYVPSFLSFSCEKW----SHIKFSF----------SSSGGCVVKS 478

Query: 405 CGFHPGYM 412
           CGF P Y+
Sbjct: 479 CGFCPVYI 486


>gi|357500729|ref|XP_003620653.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495668|gb|AES76871.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1235

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 206/493 (41%), Gaps = 101/493 (20%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL+L  +  K++  S +    L  L L   K  +    +     +L++LNL  C K  
Sbjct: 596  LVELILKNSSFKQLWKSKKYFPNLKALDLSDSK--IEKIIDFGEFPNLESLNLERCEKLV 653

Query: 64   NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L  ++G +  L  L++     +   P+SIF + +L+ L   GC+   +++        N
Sbjct: 654  ELDSSIGLLRKLVYLNLDYCINLVSIPNSIFCLSSLEDLYMCGCSKVFNNSR-------N 706

Query: 123  LMRRSSDLG---------------ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH 167
            L+ +  D+                   LPSL  L  L ++D+S C L +  +P  I  LH
Sbjct: 707  LIEKKHDINESFHKWIILPTPTRNTYCLPSLHSLYCLRQVDISFCHLNQ--VPDAIEGLH 764

Query: 168  SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP-PNVEKVRVNGCASLVT 226
            SL+ LYL+ N FVTLP S+  L  LE L L+ CK L+SLPQLP P       +       
Sbjct: 765  SLERLYLAGNYFVTLP-SLRKLSKLEYLDLQHCKLLESLPQLPFPTT--TEQDWWIRSQD 821

Query: 227  LLGALKLRKSSCTIIDFV-DSLKLLGK---NGLAISMLREFLEVVSAPSH--KFSIVVPG 280
              G  +       I  F+ +  KL+ +   + + IS +  F++    P+      IV PG
Sbjct: 822  FSGYRRTNHGPALIGLFIFNCPKLVERERCSSITISWMAHFIQANQQPNKLSALQIVTPG 881

Query: 281  SEIPKWFMYQNEGSSITVTR-PSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAH 339
            SEIP W   Q+ G+SI++   P    N N ++G+ +C +  +             P    
Sbjct: 882  SEIPSWINNQSVGASISIDESPVINDNNNNIIGFVSCVLISMA------------PQDTT 929

Query: 340  VLHC---SMDEKFGHR-----------------GSDHLWLLYLPRQSY------------ 367
            ++HC   S+  K G +                  S HLWL+Y PR+SY            
Sbjct: 930  MMHCFPLSIYMKMGAKRNRRKLPVIIVRDLITTKSSHLWLVYFPRESYDVYGTLRAKCYQ 989

Query: 368  ----------YCNVKWHFESNHFRLSFMDEREKHCPAGS---------GTGLKVKRCGFH 408
                      Y NV+   ++N    S   +     P GS           G KVK CG+ 
Sbjct: 990  GEVVGFEVKSYDNVEDVLDNNEIDASLAGQSGDSSPEGSMNKDVTEEVDVGTKVKSCGYS 1049

Query: 409  PGYMHEVEEFDET 421
                 ++++F+ T
Sbjct: 1050 WVCKQDLQKFNLT 1062


>gi|147821821|emb|CAN63745.1| hypothetical protein VITISV_008823 [Vitis vinifera]
          Length = 477

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 116/230 (50%), Gaps = 8/230 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           MECL+ L L  T IKE+P SIE L  LV L L  C+NL  LPS+I  LK LK LNL GC 
Sbjct: 4   MECLKSLNLSGTCIKELPSSIEFLKHLVDLWLVKCENLRSLPSSICRLKYLKELNLSGCS 63

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
             E   E +  +E LE LD+SGT I+  PSSI  + +L  L    C      PSS     
Sbjct: 64  NLETFPEIMEDMERLEWLDLSGTCIKELPSSIGYLNHLIYLHLSHCKNLRSLPSSIGWLK 123

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                 +    +L    + +L  LG L   ++ D     G   SD+  L  L+ L LS+N
Sbjct: 124 LLRKLNLNDCPNLVTGDMENLINLGVLETQNMMD-----GVASSDLWCLSLLEVLDLSQN 178

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           N   +P +I  L NL  L +  CK L+ + ++P ++ ++  + C    TL
Sbjct: 179 NMRHIPTAITRLCNLRHLNISHCKMLEEILEVPSSLREINAHDCPIFGTL 228


>gi|356545122|ref|XP_003540994.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1045

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 140/308 (45%), Gaps = 47/308 (15%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF--ENLLETV 69
           T I  +  SI  L  L  L L+ C NL    + I  L SL  LNL GC K     LL+  
Sbjct: 665 TKIVRIDPSIGTLRELDSLNLRNCINLFLNLNIIFGLSSLTVLNLSGCSKLLTNRLLQKP 724

Query: 70  GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
            + E +E++D + ++I+   SS++ M                     LPF I    +  D
Sbjct: 725 RETEHMEKIDENRSSIQLSTSSVYEM-------------------LMLPFYIFSSWKQVD 765

Query: 130 LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
              L++P LS    L  LDLS C L +  IP  IGNLHSL  L L  N FV LP +I  L
Sbjct: 766 SLGLLVPYLSRFPRLFVLDLSFCNLLQ--IPDAIGNLHSLVILNLGGNKFVILPNTIKQL 823

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
             L  L LE CK+L+ LP+LP   ++        L T          +C           
Sbjct: 824 SELRSLNLEHCKQLKYLPELPTPKKRKNHKYYGGLNTF---------NCP---------- 864

Query: 250 LGKNGLAISMLREFLEVVSAPS-HKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMN 308
              N   + ++   +   S+ S ++  IV+PG+EIP+WF  QNEG SI++  PS L    
Sbjct: 865 ---NLSEMELIYRMVHWQSSLSFNRLDIVIPGTEIPRWFSKQNEGDSISMD-PSPLMEDP 920

Query: 309 QVVGYAAC 316
             +G A C
Sbjct: 921 NWIGVACC 928


>gi|359493291|ref|XP_002273385.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1110

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 159/321 (49%), Gaps = 48/321 (14%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++ E+P +   L  L  L L  CKNL  LP ++ +LK LKTLN++GC K   L + +G +
Sbjct: 696 ELAEIPWN---LYSLEYLNLASCKNLKSLPESLCNLKCLKTLNVIGCSK---LPDNLGSL 749

Query: 73  ESLEELDISGTAIRCPPS--SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR--SS 128
           E LE+L  S + +  P S  S+  + +LK L     N               LM+R  S 
Sbjct: 750 ECLEKLYASSSELISPQSDSSLAGLCSLKVLDMHDTN---------------LMQRAISG 794

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           D+G+L         SL +L+LS C L E  IP DI  L+SL+ L LS N F+ +  +I+ 
Sbjct: 795 DIGSLY--------SLEELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFLGVTDAISQ 846

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
           L  L +L L  CK L  +P+LP ++  +  + C  + TL        SS +++ +   L 
Sbjct: 847 LSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKTL--------SSTSVLQWQWQLN 898

Query: 249 LLGKNGLAISMLREFLEVVSAP----SHKFSIVVPGS-EIPKWFMYQNEGSSITVTRPSY 303
                 L      ++  ++S P    S  FS V+PGS E+P+W  +Q  G+ + V  P  
Sbjct: 899 CFKSAFLQEIQEMKYRRLLSLPANGVSQGFSTVIPGSGELPEWIQHQGVGNEVIVPLPPN 958

Query: 304 LCNMNQVVGYAACRVFHVPKH 324
             + +  +G A C V+ +P+ 
Sbjct: 959 WYDKD-FLGLALCCVY-IPQQ 977


>gi|224113213|ref|XP_002332638.1| predicted protein [Populus trichocarpa]
 gi|222832865|gb|EEE71342.1| predicted protein [Populus trichocarpa]
          Length = 687

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 155/342 (45%), Gaps = 57/342 (16%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P SI  L  L+ L L  C  L  LP  I  LK L TLNL GC    +L + + +VE
Sbjct: 234 LASLPDSIGELKCLITLNLTDCSGLTSLPDRIGELKCLDTLNLSGCSGLASLPDNIDRVE 293

Query: 74  SLEELDISGTA-IRCPPSSI----FLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
               LD+SG + +   P SI    + +K L  L+  GC    S     LP  I+ +R  +
Sbjct: 294 ISYWLDLSGCSRLASLPDSIGGQHWQLKCLYALNLTGCLRLES-----LPDSIDELRCLT 348

Query: 129 DL---GALMLPSL--------------------SGLGSLTKLDLSDCGLGEGAI------ 159
            L   G L L SL                    SG   + ++  S   LG          
Sbjct: 349 TLDLSGCLKLASLPNNIIDLEFKGLDKQRCYMLSGFQKVEEIASSTYKLGCHEFLNLGNS 408

Query: 160 -----PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
                P  +G+L  L  L LS+ +F  +PASI  L  L KL L+DCKRLQ LP+LP  ++
Sbjct: 409 RVLKTPERLGSLVWLTELRLSEIDFERIPASIKHLTKLSKLYLDDCKRLQCLPELPSTLQ 468

Query: 215 KVRVNGCASLVTLLG----------ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE-- 262
            +  +GC SL ++            A +   S C  +D     +++G   L I  +    
Sbjct: 469 VLIASGCISLKSVASIFMQGDREYEAQEFNFSGCLQLDQNSRTRIMGATRLRIQRMATSL 528

Query: 263 FLEVVSAPSHKFSIVVPGSEIPKWFMYQN-EGSSITVTRPSY 303
           F +       +  + +PGSE+P+WF Y+N EGSS+ + +P++
Sbjct: 529 FYQEYHGKPIRVRLCIPGSEVPEWFSYKNREGSSVKIRQPAH 570



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 121/221 (54%), Gaps = 18/221 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P SI +L  L QL L GC +L  LP+NI++LKSLK+LNL GC +  +L  ++G 
Sbjct: 78  SGLASLPHSIGMLKSLDQLDLSGCSSLTSLPNNIDALKSLKSLNLSGCSRLASLPNSIGV 137

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++ L++LD+SG + +   P SI  +K LK+L+  GC+   S     LP  I  +    D 
Sbjct: 138 LKCLDQLDLSGCSRLASLPDSIGALKCLKSLNLSGCSRLAS-----LPNSIGRLASLPD- 191

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
                 S+  L  L  L+L  C  G  ++P +IG L SLK+L LS  +   +LP SI  L
Sbjct: 192 ------SIGELKCLKLLNLHGCS-GLASLPDNIGELKSLKSLDLSGCSRLASLPDSIGEL 244

Query: 190 FNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
             L  L L DC  L SLP        ++ + ++GC+ L +L
Sbjct: 245 KCLITLNLTDCSGLTSLPDRIGELKCLDTLNLSGCSGLASL 285


>gi|147862827|emb|CAN78931.1| hypothetical protein VITISV_024045 [Vitis vinifera]
          Length = 1454

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 152/326 (46%), Gaps = 14/326 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L LD+T IKE+P SI  L+ L  L L+ C+NL  LP++I  LKSL+ L+L GC 
Sbjct: 983  MGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCS 1042

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
              E   E    +E LE L +  T I   PS I  ++ L++L    C      P+S     
Sbjct: 1043 NLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELINCENLVALPNSIGSLT 1102

Query: 118  PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                  +R  + L  L     S    L  LDL  C L EG IPSD+  L  L +L +S+N
Sbjct: 1103 CLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSEN 1162

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
            +   +PA I  L  L+ L +  C  L+ + ++P ++  +  +GC SL T   +  L  S 
Sbjct: 1163 HIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAHGCPSLETETFSSLLWSSL 1222

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSI 296
                      +    N         FL++   P  +FSI++PGS  IP+W  +Q  G  +
Sbjct: 1223 LKRFKSPIQPEFFEPNF--------FLDLDFYP-QRFSILLPGSNGIPEWVSHQRMGCEV 1273

Query: 297  TVTRPSYLCNMNQVVGYAACRVFHVP 322
            ++  P      +  +G+      HVP
Sbjct: 1274 SIELPMNWYEDDNFLGFVLF-FHHVP 1298



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 109/224 (48%), Gaps = 20/224 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+EL L+K++IKE+P SI  L+ L  L L  C NL + P    ++K L+ L+L GC 
Sbjct: 726 MGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCS 785

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           KFE   +T   +E L  L +  + I+  PSSI  +++L+ L    C       S +  FP
Sbjct: 786 KFEKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYC-------SKFEKFP 838

Query: 121 INLMRRSSDLGALMLP---------SLSGLGSLTKLDLSDCGLGEGAIPSDI-GNLHSLK 170
             +      L  L L          S+  L SL  L L +C   E    SDI  N+  L+
Sbjct: 839 -EIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKF--SDIFTNMGLLR 895

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
            LYL ++    LP SI  L +LE L L  C   Q  P++  N++
Sbjct: 896 ELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLK 939



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 55/261 (21%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-----------------------KN 37
            M+CL+EL LD T IKE+P S+  L+ L  L+LK C                         
Sbjct: 844  MKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRESG 903

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
            +  LP++I  L+SL+ LNL  C  F+   E  G ++ L+EL +  TAI+  P+ I  ++ 
Sbjct: 904  IKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGCLQA 963

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
            L++L+  GC+              N  R          P +  +G L  L L +  + E 
Sbjct: 964  LESLALSGCS--------------NFER---------FPEIQ-MGKLWALFLDETPIKE- 998

Query: 158  AIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK- 215
             +P  IG+L  LK L L    N  +LP SI  L +LE+L L  C  L++  ++  ++E+ 
Sbjct: 999  -LPCSIGHLTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERL 1057

Query: 216  ----VRVNGCASLVTLLGALK 232
                +R  G   L +L+G L+
Sbjct: 1058 EHLFLRETGITELPSLIGHLR 1078



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 51/226 (22%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L E+ L  ++IK++    + L  L  + L   K LV++P   +S+ +L+ LNL GC  
Sbjct: 610 ENLVEINLKSSNIKQLWKGDKFLGKLKVIDLSDSKQLVKMPK-FSSMPNLERLNLEGCIS 668

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G                        +K L  L+  GC    S       FP 
Sbjct: 669 LRELHLSIGD-----------------------LKRLTYLNLGGCEQLQS-------FPP 698

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            +   S  L  L L     L    K+                GN+  LK LYL+K+    
Sbjct: 699 GMKFES--LEVLYLDRCQNLKKFPKIH---------------GNMGHLKELYLNKSEIKE 741

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASL 224
           LP+SI  L +LE L L +C  L+  P++  N++ +R   + GC+  
Sbjct: 742 LPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKF 787


>gi|104646971|gb|ABF74109.1| disease resistance protein [Arabidopsis thaliana]
          Length = 584

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 162/369 (43%), Gaps = 73/369 (19%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+ +P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S TAIR  P SI  +  L+ L+
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                              N    S  L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IG-----------------NSFYTSEGLLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
            SLV++ G        KL  S+C  +D              I + R      + P H + 
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLD----------QATQILIHRNMKLESAKPEHSY- 504

Query: 276 IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP 335
              PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            YP
Sbjct: 505 --FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------YP 552

Query: 336 HPAHVLHCS 344
             +  +HCS
Sbjct: 553 MNSLKIHCS 561



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 17/225 (7%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC      +PS +G+L SLK+L L 
Sbjct: 135 EISYNTRRLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLR-TLPSYLGHLVSLKSLNLD 193

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
                  LP ++  L +LE L++  C  +   P++  N+E +R++
Sbjct: 194 GCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLRIS 238



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEISYNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 FLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P    N+  L+   +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVSTNIEVLR---I 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKSMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS             YL   I
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS-----------CFYLTNCI 105

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            L           +P    L SL  + +S C       P +I   ++ + L+LS      
Sbjct: 106 QLKN---------IPIGITLKSLETVGMSGCS-SLKHFP-EIS--YNTRRLFLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|93117599|gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 1142

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 25/321 (7%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L+  + + E+  S+  L  L+ L LKGC  +  LP +I  + SLK+LN+ GC + 
Sbjct: 675 LEKLMLEGCSSLVEVHQSVGHLKSLILLNLKGCWRIKILPESICDVNSLKSLNISGCSQL 734

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPF 119
           E L E +  ++SL EL           SSI  +K+L+ LS R  N      SS SC  P 
Sbjct: 735 EKLPERMSDIKSLTELLADEIQNEQFLSSIGHLKHLRKLSLRVSNFNQDSLSSTSC--PS 792

Query: 120 PINLMRRSSDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSK 176
           PI+    +S L     LP S     S+ +L L++ GL E A      G L SL+ L LS 
Sbjct: 793 PISTWISASVLRVQPFLPTSFIDWRSVKRLKLANYGLSESATNCVYFGGLSSLQELNLSG 852

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK---- 232
           N F++LP+ I+ L  L+ L++++C  L S+ +LP ++EK+  + C S+  +   ++    
Sbjct: 853 NKFLSLPSGISVLTKLQHLRVQNCSNLVSISELPSSLEKLYADSCRSMKRVCLPIQSKTN 912

Query: 233 --LRKSSCTIIDFVDSLKLLGKNGLAI----------SMLREFLEVVSAPSHKFSIVVPG 280
             L    C  +  +  ++ L  +G  I          +  + F+E + +  + + I   G
Sbjct: 913 PILSLEGCGNLIEIQGMEGLSNHGWVIFSSGCCDLSNNSKKSFVEALRSGGYGYQIHFDG 972

Query: 281 SEIPKWFMYQNEGSSITVTRP 301
             +P W  +  EGSS++   P
Sbjct: 973 GTMPSWLSFHGEGSSLSFHVP 993


>gi|359493406|ref|XP_002279885.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1351

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 152/326 (46%), Gaps = 14/326 (4%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L LD+T IKE+P SI  L+ L  L L+ C+NL  LP++I  LKSL+ L+L GC 
Sbjct: 880  MGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCS 939

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL 117
              E   E    +E LE L +  T I   PS I  ++ L++L    C      P+S     
Sbjct: 940  NLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELINCENLVALPNSIGSLT 999

Query: 118  PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                  +R  + L  L     S    L  LDL  C L EG IPSD+  L  L +L +S+N
Sbjct: 1000 CLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSEN 1059

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
            +   +PA I  L  L+ L +  C  L+ + ++P ++  +  +GC SL T   +  L  S 
Sbjct: 1060 HIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAHGCPSLETETFSSLLWSSL 1119

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSI 296
                      +    N         FL++   P  +FSI++PGS  IP+W  +Q  G  +
Sbjct: 1120 LKRFKSPIQPEFFEPNF--------FLDLDFYP-QRFSILLPGSNGIPEWVSHQRMGCEV 1170

Query: 297  TVTRPSYLCNMNQVVGYAACRVFHVP 322
            ++  P      +  +G+      HVP
Sbjct: 1171 SIELPMNWYEDDNFLGFVLF-FHHVP 1195



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 55/261 (21%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-----------------------KN 37
           M+CL+EL LD T IKE+P S+  L+ L  L+LK C                         
Sbjct: 741 MKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRESG 800

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           +  LP++I  L+SL+ LNL  C  F+   E  G ++ L+EL +  TAI+  P+ I  ++ 
Sbjct: 801 IKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGCLQA 860

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L++L+  GC+              N  R          P +  +G L  L L +  + E 
Sbjct: 861 LESLALSGCS--------------NFER---------FPEIQ-MGKLWALFLDETPIKE- 895

Query: 158 AIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK- 215
            +P  IG+L  LK L L    N  +LP SI  L +LE+L L  C  L++  ++  ++E+ 
Sbjct: 896 -LPCSIGHLTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERL 954

Query: 216 ----VRVNGCASLVTLLGALK 232
               +R  G   L +L+G L+
Sbjct: 955 EHLFLRETGITELPSLIGHLR 975



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 109/224 (48%), Gaps = 20/224 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+EL L+K++IKE+P SI  L+ L  L L  C NL + P    ++K L+ L+L GC 
Sbjct: 623 MGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCS 682

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           KFE   +T   +E L  L +  + I+  PSSI  +++L+ L    C       S +  FP
Sbjct: 683 KFEKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYC-------SKFEKFP 735

Query: 121 INLMRRSSDLGALMLP---------SLSGLGSLTKLDLSDCGLGEGAIPSDI-GNLHSLK 170
             +      L  L L          S+  L SL  L L +C   E    SDI  N+  L+
Sbjct: 736 -EIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKF--SDIFTNMGLLR 792

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
            LYL ++    LP SI  L +LE L L  C   Q  P++  N++
Sbjct: 793 ELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLK 836



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 87/220 (39%), Gaps = 51/220 (23%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D  DI +     E L  L  + L   K LV++P   +S+ +L+ LNL GC     L  
Sbjct: 513 LWDVDDIYDAFSRQEFLGKLKVIDLSDSKQLVKMPK-FSSMPNLERLNLEGCISLRELHL 571

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
           ++G                        +K L  L+  GC    S       FP  +   S
Sbjct: 572 SIGD-----------------------LKRLTYLNLGGCEQLQS-------FPPGMKFES 601

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L  L L     L    K+                GN+  LK LYL+K+    LP+SI 
Sbjct: 602 --LEVLYLDRCQNLKKFPKIH---------------GNMGHLKELYLNKSEIKELPSSIV 644

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASL 224
            L +LE L L +C  L+  P++  N++ +R   + GC+  
Sbjct: 645 YLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKF 684


>gi|104647005|gb|ABF74126.1| disease resistance protein [Arabidopsis thaliana]
          Length = 586

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 162/369 (43%), Gaps = 73/369 (19%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+ +P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S TAIR  P SI  +  L+ L+
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                              N    S  L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IG-----------------NSFYTSEGLLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
            SLV++ G        KL  S+C  +D              I + R      + P H + 
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLD----------QATQILIHRNMKLESAKPEHSY- 504

Query: 276 IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP 335
              PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            YP
Sbjct: 505 --FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------YP 552

Query: 336 HPAHVLHCS 344
             +  +HCS
Sbjct: 553 MNSLKIHCS 561



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 17/225 (7%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC      +PS +G+L SLK+L L 
Sbjct: 135 EISYNTRRLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLR-TLPSYLGHLVSLKSLNLD 193

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
                  LP ++  L +LE L++  C  +   P++  N+E +R++
Sbjct: 194 GCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLRIS 238



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEISYNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 FLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P    N+  L+   +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVSTNIEVLR---I 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS             YL   I
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS-----------CFYLTNCI 105

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            L           +P    L SL  + +S C       P +I   ++ + L+LS      
Sbjct: 106 QLKN---------IPIGITLKSLETVGMSGCS-SLKHFP-EIS--YNTRRLFLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|147834354|emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 115/222 (51%), Gaps = 34/222 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            MECL +L L  T IKE+P SIE L+ L  + L   KNL  LPS+I  LK L+ LNL GC 
Sbjct: 928  MECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVEXKNLRSLPSSICRLKFLEKLNLYGCS 987

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E   E +  +E L++LD+SGT+I+  PSSI  + +L +     C    S     LP  
Sbjct: 988  HLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYCTNLRS-----LP-- 1040

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                            S+ GL SLTKL LS         P+ +      + L+LSKNN  
Sbjct: 1041 ---------------SSIGGLKSLTKLSLS-------GRPNRVT-----EQLFLSKNNIH 1073

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
             +P+ I+ L NLE L +  CK L+ +P LP ++ ++  +GC 
Sbjct: 1074 HIPSVISQLCNLECLDISHCKMLEEIPDLPSSLREIDAHGCT 1115



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 116/222 (52%), Gaps = 15/222 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL L  T +K +P SIE L+ L +L L+ CKNL  LPS+I  LKSL+ L+L GC 
Sbjct: 786  MEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCS 845

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E   E +  +E L EL++S T I+  P SI  + +L  L  + C    S     LP  
Sbjct: 846  NLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRS-----LPSS 900

Query: 121  INLMRRSSDLGALMLPSL-------SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            I  ++   +L      +L         +  L KLDLS   + E  +PS I  L+ L ++ 
Sbjct: 901  ICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKE--LPSSIEYLNHLTSMR 958

Query: 174  LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
            L +  N  +LP+SI  L  LEKL L  C  L++ P++  ++E
Sbjct: 959  LVEXKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDME 1000



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+ L L    I E+P SI  L+ L  L+++GC+NL  LPS+I  LKSL+ L+L GC    
Sbjct: 718 LKRLYLHSIAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLX 777

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
              E +  +E L EL++SGT ++  PSSI  + +L  L  R C    S     LP  I  
Sbjct: 778 TFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRS-----LPSSIWR 832

Query: 124 MRRSSDLGALMLPSL-------SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS- 175
           ++   +L      +L         +  L +L+LS   + E  +P  IG L+ L  L L  
Sbjct: 833 LKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKE--LPPSIGYLNHLTFLGLQC 890

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
             N  +LP+SI  L +LE+L L  C  L+  P++  N+E
Sbjct: 891 CQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIMENME 929



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 26/207 (12%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           +  L QL ++ C+ L ++ S+I  LK L  LNL GC K  +L  T+  + SL+ L +   
Sbjct: 667 MPNLEQLNIELCEKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSI 726

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
           AI   PSSI  +  L+TLS RGC    S     LP                  S+  L S
Sbjct: 727 AIDELPSSIHHLTQLQTLSIRGCENLRS-----LP-----------------SSICRLKS 764

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
           L +LDL  C       P  + N+  L  L LS  +   LP+SI  L +L +L+L  CK L
Sbjct: 765 LEELDLYGCS-NLXTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNL 823

Query: 204 QSLPQ---LPPNVEKVRVNGCASLVTL 227
           +SLP       ++E++ + GC++L T 
Sbjct: 824 RSLPSSIWRLKSLEELDLFGCSNLETF 850


>gi|297741883|emb|CBI33318.3| unnamed protein product [Vitis vinifera]
          Length = 1333

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 131/291 (45%), Gaps = 36/291 (12%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L L GC NL  LP NI  LK L+ L+  GC K E   E  G +  L  LD+SGTAI   P
Sbjct: 495 LILIGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLP 554

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
           SSI  +  L+TL  + C       S     PI++                 L SL  LDL
Sbjct: 555 SSITHLNGLQTLLLQEC-------SKLHKIPIHICH---------------LSSLEVLDL 592

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
             C + EG IPSDI +L SL+ L L + +F ++P +IN L +LE L L  C  L+ + +L
Sbjct: 593 GHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQITEL 652

Query: 210 PPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA 269
           P          C  L+   G+      + +   F+    L+     A           S 
Sbjct: 653 P---------SCLRLLDAHGS----NRTSSRAPFLPLHSLVNCFRWAQDWKHTSFRDSSY 699

Query: 270 PSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
                 IV+PGS+ IP+W + + +  S  +  P      N+ +G+A C V+
Sbjct: 700 HGKGTCIVLPGSDGIPEWILNRGDNFSSVIELPQNWHQNNEFLGFAICCVY 750



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 95/191 (49%), Gaps = 29/191 (15%)

Query: 5    RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
            R+     +D+ E+P+    L  L  L L+ CKNL  LPS+I   KSL TL+  GC + E+
Sbjct: 926  RKCCFKGSDMNEVPIIGNPLE-LDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLES 984

Query: 65   LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS--------- 111
            + E +  +ESL +L +SGTAI+  PSSI  ++ L+ L    C    N P S         
Sbjct: 985  IPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKF 1044

Query: 112  ----SASCYLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
                S   +   P NL R  S         D     LPSLSGL SL +L+L  C + E  
Sbjct: 1045 LIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACNIRE-- 1102

Query: 159  IPSDIGNLHSL 169
            IPS+I  L SL
Sbjct: 1103 IPSEICYLSSL 1113



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P +I  L SL+ L+L  C 
Sbjct: 537 MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCN 596

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  + +L+ L+   CN 
Sbjct: 597 IMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNN 645



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 54/121 (44%), Gaps = 27/121 (22%)

Query: 89   PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS-LSGLGSLTKL 147
            PSSIF  K+L TLS  GC+   S                       +P  L  + SL KL
Sbjct: 962  PSSIFGFKSLATLSCSGCSQLES-----------------------IPEILQDMESLRKL 998

Query: 148  DLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
             LS   + E  IPS I  L  L+ L LS   N V LP SI  L +L+ L +E C   + L
Sbjct: 999  SLSGTAIKE--IPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKL 1056

Query: 207  P 207
            P
Sbjct: 1057 P 1057



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 137  SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
            S+ G  SL  L  S C   E +IP  + ++ SL+ L LS      +P+SI  L  L+ L 
Sbjct: 964  SIFGFKSLATLSCSGCSQLE-SIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLL 1022

Query: 197  LEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL---LGALK 232
            L +CK L +LP+   N+  ++   V  C S   L   LG L+
Sbjct: 1023 LSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQ 1064


>gi|357500609|ref|XP_003620593.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355495608|gb|AES76811.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 1196

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 201/442 (45%), Gaps = 58/442 (13%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL+L  ++IK++    + L  L  L L+  K LV++  +     +L+ LNL GC    
Sbjct: 623  LVELILHSSNIKQLWRKKKYLPNLRGLDLRYSKKLVKIV-DFGEFPNLEWLNLEGCISLL 681

Query: 64   NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L  ++G + +L  L++     +   P++IF + +LK L    C+   ++    L  P +
Sbjct: 682  ELDPSIGLLRNLVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHKAFTNQRD-LKNP-D 739

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
            +   +S   + +L SL  L  L ++++S C L +  +   I  L+ L+ L L  NNFVTL
Sbjct: 740  ISESASHSRSYVLSSLHSLYCLREVNISFCRLSQ--VSYAIECLYWLEILNLGGNNFVTL 797

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLP--PNV-EKVRVNGCASLVTLLGALKLRKSSCT 239
            P S+  L  L  L LE CK L+SLPQLP   N+ E  R N           L  RK +  
Sbjct: 798  P-SLRKLSKLVYLNLEHCKLLESLPQLPFPTNIGEDHRENN-----NKFHDLFTRKVTQL 851

Query: 240  IIDFVDSLKLLGK-NGLAISMLREFLEVVS--APSHKFS---IVVPGSEIPKWFMYQNEG 293
            +I     L    + + +A S + +F++      P+  F    IV PGSEIP W   Q+ G
Sbjct: 852  VIFNCPKLGERERCSSMAFSWMIQFIQAYQHFYPASLFEGIHIVTPGSEIPSWINNQSVG 911

Query: 294  SSITVTR-PSYLCNMNQVVGYAACRVFHVPKHST----------GIRRFYRYPHPAHVLH 342
            SSI + R P    N N ++G+  C VF V  +             I     +  P  +  
Sbjct: 912  SSIPIDRSPIMHDNNNNIIGFVCCAVFSVAPNQEILPWIADIKLVIDSLSSFSVPVILKR 971

Query: 343  CSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREK---HCPAGSGTG 399
              +  K     S HLW++YL R+SY                  D+ EK   +   G   G
Sbjct: 972  YLITTK-----SSHLWIIYLSRESY------------------DKFEKISCYIVGGEDLG 1008

Query: 400  LKVKRCGFHPGYMHEVEEFDET 421
            ++V  CG+      +++EF+ T
Sbjct: 1009 MEVNSCGYRWVCKQDLQEFNLT 1030


>gi|104647031|gb|ABF74139.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFXFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYFLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGXLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS        S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGXLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E    ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGXLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290


>gi|357500587|ref|XP_003620582.1| Elongation factor Ts [Medicago truncatula]
 gi|355495597|gb|AES76800.1| Elongation factor Ts [Medicago truncatula]
          Length = 1245

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 190/429 (44%), Gaps = 61/429 (14%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            LL   D  E P        L  L L+GCKNLV L  +I  L+ L  LNL  C    ++  
Sbjct: 638  LLKIVDFGEFP-------NLEWLNLEGCKNLVELDPSIGLLRKLVYLNLKNCKNLVSIPN 690

Query: 68   TVGQVESLEELDISGTAIRCPPSSIFLMK----NLKTLSFRGCNGPPSSASCYLPFPINL 123
             +  + SLE+L++ G + +   + + L K    + K  + +  +   S +    P P   
Sbjct: 691  NIFDLCSLEDLNMRGCS-KVFNNPMHLKKSGLSSTKKKNKKQHDTRESESHSSFPTPTT- 748

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                      +LP    L S   +D+S C L +  +P  I  LH L+ L L  NNFVTLP
Sbjct: 749  -------NTYLLPFSHSLRS---IDISFCHLRQ--VPDAIECLHWLERLDLGGNNFVTLP 796

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQL--PPNVEKVRVNGCASLVTLLGALKLRKSSCTII 241
             S+  L  L  L LE CK L+SLP+L  PP   + +     + + L     +RK +  +I
Sbjct: 797  -SLRKLSKLVYLNLEHCKLLESLPRLPSPPTSGRDQQENNNTFIGLYDFGIVRKITGLVI 855

Query: 242  DFVDSLKLLGK---NGLAISMLREFLEVVSAPS---HKFSIVVPGSEIPKWFMYQNEGSS 295
                 L    +   + L  S + +F  +++ P    ++F I+ PGSEIP W   Q+ G S
Sbjct: 856  FNCPKLADCERERCSSLTFSWMIQF--IMANPQSYLNEFHIITPGSEIPSWINNQSMGDS 913

Query: 296  ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSD 355
            I +   S +   +  +G+  C VF V    + +  ++R       +  ++        S 
Sbjct: 914  IPIEFSSAM--HDNTIGFVCCVVFSVAPQVSTV--WFRIMCIDLDIPVTIKGSLITTKSS 969

Query: 356  HLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHC---PAGSGTGLKVKRCGFHPGYM 412
            HLW+++LPR SY                  D+ E  C     G G G++VK CG+     
Sbjct: 970  HLWMIFLPRGSY------------------DKFENICCYDVLGEGLGMEVKSCGYRWICK 1011

Query: 413  HEVEEFDET 421
             +++EF+ T
Sbjct: 1012 QDLQEFNIT 1020


>gi|302125458|emb|CBI35545.3| unnamed protein product [Vitis vinifera]
          Length = 828

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 122/228 (53%), Gaps = 21/228 (9%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L+  T ++E+  SI  L  L  L LK CK+L  LP +I +LKSLKTL L GC + 
Sbjct: 561 LEKLILEGCTSLREIDPSIGDLRRLSLLDLKECKSLGSLPDSICNLKSLKTLYLSGCSEL 620

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L E +G ++ L EL  + TA   PP  I  ++ L+ LSF GC G  +  S +    + 
Sbjct: 621 NCLPEDLGNMQHLTELYANRTATGAPPPVIGRLRELQILSFSGCTGGRAHPSLFSLSGLF 680

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           L+R                    +LDLSDC   +  IP D   L+SL+ L LS N+F  +
Sbjct: 681 LLR--------------------ELDLSDCYWWDAEIPDDFWGLYSLENLNLSGNHFTMV 720

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA 230
           P  I  L  L+ L L  CKRL+ +P+ P ++E++  + CASL T L +
Sbjct: 721 PRRITELSMLKVLVLGRCKRLEEIPEFPSSLEELDAHECASLQTSLAS 768


>gi|451798980|gb|AGF69188.1| TMV resistance protein N-like protein 2 [Vitis labrusca]
          Length = 1386

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 145/334 (43%), Gaps = 70/334 (20%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            +D+ E+P+ IE    L +L L GCKNL  LPS I + KSL TL   GC + E+  + +  
Sbjct: 1091 SDMTEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQD 1149

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASC------------ 115
            +ESL  L + GTAI+  PSSI  ++ L+  +   C    N P S  +             
Sbjct: 1150 MESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCP 1209

Query: 116  -YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
             +   P NL R  S         D     LPSLSGL SL  L L  C + E  IPS+I +
Sbjct: 1210 NFRKLPDNLGRLQSLLQLSVGHLDSMNFQLPSLSGLCSLRTLMLHACNIRE--IPSEIFS 1267

Query: 166  LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
            L SL+ L L+ N+F  +P  I+ L+NL  L L  CK LQ +P+LP  V + ++      V
Sbjct: 1268 LSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR----V 1323

Query: 226  TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
              +   K R  +  I +          NG                            IP+
Sbjct: 1324 IFVQGCKYRNVTTFIAE---------SNG----------------------------IPE 1346

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            W  +Q  G  IT+  P      +  +G   C + 
Sbjct: 1347 WISHQKSGFKITMKLPWSWYENDDFLGVVLCSLI 1380



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 106/208 (50%), Gaps = 24/208 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D   +P ++E+L+ L   T+ GC NL RLP  I   K L+TL+  GC K E   E  G +
Sbjct: 634 DFSSVP-NLEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNM 691

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
             L  LD+SGTAI   PSSI  +  L+TL  + C       +     PI++         
Sbjct: 692 RELRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC-------AKLHKIPIHICH------- 737

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
                   L SL  LDL  C + EG IPSDI +L SL+ L L + +F ++P +IN L  L
Sbjct: 738 --------LSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRL 789

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
           E L L  C  L+ +P+LP  +  +  +G
Sbjct: 790 EVLNLSHCSNLEQIPELPSRLRLLDAHG 817



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P +I  L SL+ L+L  C 
Sbjct: 691 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCN 750

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  +  L+ L+   C+ 
Sbjct: 751 IMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSN 799


>gi|359493343|ref|XP_002277693.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1140

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 186/429 (43%), Gaps = 66/429 (15%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T+++++  S+  LS L+ L L+ C NL  LPS I  L SL+TL L GC K E L E    
Sbjct: 719  TNLRKVHPSLGYLSKLILLNLENCTNLEHLPS-IRWLVSLETLILSGCSKLEKLPEVPQH 777

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +  L +L + GTAI           +    S  G N   +S +      +N    S D  
Sbjct: 778  MPYLSKLCLDGTAI----------TDFSGWSELG-NFQENSGNLDCLNELN----SDDST 822

Query: 132  ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
               LPS S +        S       +I      L SL  L LS  + + LP ++  LF 
Sbjct: 823  IRQLPSSSVVLRNHNASPSSAPRRSHSIRPHC-TLTSLTYLNLSGTSIIRLPWNLERLFM 881

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT-------------LLG-ALKLRKSS 237
            L++L+L +C+RLQ+LP LP ++E++  + C SL               L G   KLR   
Sbjct: 882  LQRLELTNCRRLQALPVLPSSIERMNASNCTSLELVSPQSVFKRFGGFLFGNCFKLRNCH 941

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
              +   V S+      G   S    +   V  P   FS V PGSEIP WF + ++G  I 
Sbjct: 942  SKMEHDVQSVASHVVPGAWRSTYASWHPNVGIP---FSTVFPGSEIPDWFRHHSQGHEIN 998

Query: 298  V-TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY-PHPAHVLH------CSMDEKF 349
            +   P +  N N  +G+A   V   P+H +  R +Y Y     H L+      CS    +
Sbjct: 999  IEVPPDWYINSN-FLGFALSAVM-APQHDS--RAWYMYCDLDTHDLNSNSHRICSFFGSW 1054

Query: 350  GHR------GSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVK 403
             ++       SDH+WL Y+P    +   KW    +H + SF           S  G  VK
Sbjct: 1055 TYQLQHTPIESDHVWLAYVPSFLSFSCEKW----SHIKFSF----------SSSGGCVVK 1100

Query: 404  RCGFHPGYM 412
             CGF P Y+
Sbjct: 1101 SCGFCPVYI 1109


>gi|104646999|gb|ABF74123.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNIVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLRGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L  L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLFRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNL+ LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLRGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|359477823|ref|XP_002282797.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1400

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 144/331 (43%), Gaps = 70/331 (21%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            +D+ E+P+ IE    L +L L GCKNL  LPS I + KSL TL   GC + E+  + +  
Sbjct: 1105 SDMTEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQD 1163

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASC------------ 115
            +ESL  L + GTAI+  PSSI  ++ L+  +   C    N P S  +             
Sbjct: 1164 MESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCP 1223

Query: 116  -YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
             +   P NL R  S         D     LPSLSGL SL  L L  C + E  IPS+I +
Sbjct: 1224 NFRKLPDNLGRLQSLLQLSVGHLDSMNFQLPSLSGLCSLRTLMLHACNIRE--IPSEIFS 1281

Query: 166  LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
            L SL+ L L+ N+F  +P  I+ L+NL  L L  CK LQ +P+LP  V + ++      V
Sbjct: 1282 LSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR----V 1337

Query: 226  TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
              +   K R  +  I +          NG                            IP+
Sbjct: 1338 IFVQGCKYRNVTTFIAE---------SNG----------------------------IPE 1360

Query: 286  WFMYQNEGSSITVTRPSYLCNMNQVVGYAAC 316
            W  +Q  G  IT+  P      +  +G   C
Sbjct: 1361 WISHQKSGFKITMKLPWSWYENDDFLGVVLC 1391



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 106/208 (50%), Gaps = 24/208 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D   +P ++E+L+ L   T+ GC NL RLP  I   K L+TL+  GC K E   E  G +
Sbjct: 648 DFSSVP-NLEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNM 705

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
             L  LD+SGTAI   PSSI  +  L+TL  + C       +     PI++         
Sbjct: 706 RELRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC-------AKLHKIPIHICH------- 751

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
                   L SL  LDL  C + EG IPSDI +L SL+ L L + +F ++P +IN L  L
Sbjct: 752 --------LSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRL 803

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
           E L L  C  L+ +P+LP  +  +  +G
Sbjct: 804 EVLNLSHCSNLEQIPELPSRLRLLDAHG 831



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P +I  L SL+ L+L  C 
Sbjct: 705 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCN 764

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  +  L+ L+   C+ 
Sbjct: 765 IMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSN 813


>gi|342365839|gb|AEL30372.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1061

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 137/298 (45%), Gaps = 38/298 (12%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            L+ L L  C +L   P  +  + SLK LNL  C  F +  E    +  L  L     AI
Sbjct: 684 SLLVLNLWECTSLETFPGKLE-MSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAI 742

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN------LMRRSSDLGALMLP-SL 138
              P S+  +  L  L  RGC       +C LP  I+      ++R SS      LP S+
Sbjct: 743 SELPISLGCLVGLSELDLRGCK----KLTC-LPDSIHELESLRILRASSCSSLCDLPHSV 797

Query: 139 SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           S +  L+ LDL DC L E + P D G   SL  L LS N+FV LP SI+ L  L+ L L 
Sbjct: 798 SVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLDLSGNHFVNLPISIHELPKLKCLSLN 857

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAIS 258
            CKRLQSLP+LP ++ +++   C SL T   +      +C++                  
Sbjct: 858 GCKRLQSLPELPSSIRELKAWCCDSLDT--RSFNNLSKACSV------------------ 897

Query: 259 MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAAC 316
               F      P     +V+PG+ IP WF+++ E + + V  P + C+ ++ +G A C
Sbjct: 898 ----FASTSQGPGEVLQMVIPGTNIPSWFVHRQESNCLLVPFPHH-CHPSERLGIALC 950



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 57/131 (43%), Gaps = 25/131 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L      I E+P+S+  L GL +L L+GCK L  LP +I+ L+SL+ L    C 
Sbjct: 729 MTKLSRLSFQDMAISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCS 788

Query: 61  KFENLLETV-------------------------GQVESLEELDISGTAIRCPPSSIFLM 95
              +L  +V                         GQ  SL +LD+SG      P SI  +
Sbjct: 789 SLCDLPHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLDLSGNHFVNLPISIHEL 848

Query: 96  KNLKTLSFRGC 106
             LK LS  GC
Sbjct: 849 PKLKCLSLNGC 859


>gi|359496030|ref|XP_002277205.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1195

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 35/227 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL LD   I+E+P SIE   GLV L L  CK L  LP++I +L+SLKTL L  C 
Sbjct: 859  MEHLSELFLDGIGIEELPSSIEYAIGLVVLDLTNCKELRSLPNSICNLESLKTLLLSDCS 918

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            K E+L +  G+++ L +L                                   +    FP
Sbjct: 919  KLESLPQNFGKLKQLRKL----------------------------------YNQTFAFP 944

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            + L+ +SS+    +LP LS L SL  L+LSDC + +G   S +  + SLK L L+ NNFV
Sbjct: 945  L-LLWKSSNSLDFLLPPLSTLRSLQDLNLSDCNIVDGPQLSVLSLMLSLKKLNLTGNNFV 1003

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +LP+SI+ L  L  LKL +C+RLQ++P+L  ++E +  + C  L T+
Sbjct: 1004 SLPSSISQLPQLTVLKLLNCRRLQAIPELLSSIEVINAHNCIPLETI 1050


>gi|104646927|gb|ABF74087.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646941|gb|ABF74094.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646945|gb|ABF74096.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646947|gb|ABF74097.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646953|gb|ABF74100.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646955|gb|ABF74101.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646957|gb|ABF74102.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646963|gb|ABF74105.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646969|gb|ABF74108.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646993|gb|ABF74120.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647013|gb|ABF74130.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647015|gb|ABF74131.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647029|gb|ABF74138.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYFLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS        S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC   ++  E        
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTR-- 141

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM- 134
             L +S T I   PSSI  +  L  L    C    +  S YL   ++L   + D    + 
Sbjct: 142 -RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPS-YLGHLVSLKSLNLDGCRRLE 199

Query: 135 -LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP +L  L SL  L++S C L     P       S++ L +S+ +   +PA I  L  L
Sbjct: 200 NLPDTLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRISETSIEEIPARICNLSQL 255

Query: 193 EKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
             L + + KRL SLP       ++EK++++GC+ L
Sbjct: 256 RSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290


>gi|359493404|ref|XP_003634588.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1102

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 184/459 (40%), Gaps = 85/459 (18%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T ++E+  SI  L+ L  L L+ C+NL  LP++I  LKSL+ L+L GC   E   E    
Sbjct: 668  TRLRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEAFSEITED 727

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E LE L +  T I   PSSI  M+ LK+L    C    +     LP  I  +   + L 
Sbjct: 728  MEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVA-----LPNSIGNLTCLTSLH 782

Query: 132  ALMLPSLSGLGS--------LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                P L  L          LT LDL  C L E  IP+D+  L SL+ L +S+N+   +P
Sbjct: 783  VRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPNDLWCLSSLEFLNVSENHMRCIP 842

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
            A I  L  L  L +  C  L+ + +LP ++  +  +GC SL T                 
Sbjct: 843  AGITQLCKLGTLLMNHCPMLEVIGELPSSLGWIEAHGCPSLET----------------- 885

Query: 244  VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRP- 301
                    +   ++        + S    + +I++PGS  IP+W  +Q  G  ++V  P 
Sbjct: 886  --------ETSSSLLWSSLLKHLKSPIQRRLNIIIPGSSGIPEWVSHQRMGCEVSVELPM 937

Query: 302  SYLCNMNQVVGYAACRVFHVP--------------------KHSTGIRR-----FYRYPH 336
            ++  + N ++G+      HVP                     H     R     FY    
Sbjct: 938  NWYEDNNLLLGFVLF-FHHVPLDDDECVRTSGFIPECKLAISHGDQTERLDNISFYHRCK 996

Query: 337  PAHVLHCSMDEKFGHRGSDH---LWLLYLP--------RQSYYCNVKWHFESNHFRLSFM 385
               +   S   +    GS     LW+ Y P        R   + N K HF++     SF 
Sbjct: 997  TYSISGLSYSSRRYDSGSTSDPALWVTYFPQIRIPSKYRSRKWNNFKAHFDNPVGNASFT 1056

Query: 386  DEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQ 424
                     G     KVK CG H  Y  + + + + +++
Sbjct: 1057 --------CGENASFKVKSCGIHLIYAQDQKHWPQPSRK 1087



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 26/132 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L L +T I E+P SIE + GL  L L  C+NLV LP++I +L  L +L++  C 
Sbjct: 728 MEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCP 787

Query: 61  KFENLLETVGQVE--------------------------SLEELDISGTAIRCPPSSIFL 94
           K  NL + +  ++                          SLE L++S   +RC P+ I  
Sbjct: 788 KLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPNDLWCLSSLEFLNVSENHMRCIPAGITQ 847

Query: 95  MKNLKTLSFRGC 106
           +  L TL    C
Sbjct: 848 LCKLGTLLMNHC 859


>gi|357474811|ref|XP_003607691.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508746|gb|AES89888.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 194/438 (44%), Gaps = 62/438 (14%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL++  + IK++    + L  L  L L    NL+++  +   + +L+ LNL GC K  
Sbjct: 599 LVELIMVDSSIKQLWEGKKNLPNLRTLDLSYSTNLIKML-DFGEVPNLERLNLEGCVKLV 657

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +   +   + L  L++    ++   P+ I  + +L+ L+  GC+               
Sbjct: 658 EMDLFICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNLCGCS--------------- 702

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
             +  ++L  L  PSL+ L  L ++D+S C L    +P DI +L  ++   L  N FVTL
Sbjct: 703 --KALNNLRHLEWPSLASLCCLREVDISFCNLSH--LPGDIEDLSCVERFNLGGNKFVTL 758

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLP-PNVEKVRVNGCASLVTLLGALKLRKSSCTII 241
           P     L  LE L LE C  L SLP+LP P   K      A +            +C+ +
Sbjct: 759 PG-FTLLSKLEYLNLEHCLMLTSLPELPSPAAIKHDEYWSAGMYIF---------NCSEL 808

Query: 242 DFVDSLKLLGKNGLAISMLREFL---EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
           D  ++ +    + L  S + +F+   +  SA      IV+PGSEIP WF  Q E  SI +
Sbjct: 809 DENETKRC---SRLTFSWMLQFILANQESSASFRSIEIVIPGSEIPSWFNNQREDGSICI 865

Query: 299 TRPSYLCNMNQVVGYAACRVFHVPKH----STGIRR---FYRYPHPAHVLHCSMDEKFGH 351
             PS +   + V+G A C VF    H    +T  ++   +  +      LH S+      
Sbjct: 866 N-PSLIMRDSNVIGIACCVVFSAAPHGLISTTNGQKPVLYLSFHRGDFELHFSILVNANP 924

Query: 352 RGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAG-----SGTGLKVKRCG 406
             S H+WL Y  R+S++  +K            +  R   C +       G GL+VK CG
Sbjct: 925 IISSHMWLTYFTRESFFDILK-----------DIGNRADDCISMEAFIVDGEGLEVKSCG 973

Query: 407 FHPGYMHEVEEFDETTKQ 424
           +   +  +++EF+  T Q
Sbjct: 974 YRWVFKQDLQEFNLITMQ 991


>gi|357454621|ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1169

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 167/322 (51%), Gaps = 33/322 (10%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L+ LV+L L  CK L  L S+ + L+SL+ L L GC + E+   T    +++++L 
Sbjct: 683 SILRLNKLVRLNLFYCKALTSLRSDTH-LRSLRDLFLSGCSRLEDFSVTS---DNMKDLA 738

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLP 136
           +S TAI   PSSI  +KNL+TL+   C   N  P+            +   + L A  L 
Sbjct: 739 LSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLH 798

Query: 137 SL-SGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            L SGL SL  L L +C  L E  IP +I  L SL+ L L + +    PASI  L  LEK
Sbjct: 799 ILLSGLASLETLKLEECRNLSE--IPDNISLLSSLRELLLKETDIERFPASIKHLSKLEK 856

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----------LGALKLRK--SSCTII 241
           L ++ C+RLQ++P+LPP+++++    C+SL T+           L A KL     +C  +
Sbjct: 857 LDVKGCRRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQAYKLHTQFQNCVNL 916

Query: 242 DFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF-----SIVVPGSEIPKWFMYQNEGSSI 296
           D + SL+ +  N   ++M +     +S    KF      ++ PGS++P+W MY+   +S+
Sbjct: 917 DEL-SLRAIEVNA-QVNMKKLAYNHLSTLGSKFLDGPVDVIYPGSKVPEWLMYRTTEASV 974

Query: 297 TVTRPSYLCNMNQVVGYAACRV 318
           TV   S     ++ VG+  C V
Sbjct: 975 TVDFSS--APKSKFVGFIFCVV 994


>gi|104647033|gb|ABF74140.1| disease resistance protein [Arabidopsis thaliana]
          Length = 583

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPXXICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP  I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPXXICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +P  I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPXXICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104646987|gb|ABF74117.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSIRRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLRGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSIRRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L  L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+  L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSIRRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLFRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNL+ LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLRGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI  L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSIRRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104646975|gb|ABF74111.1| disease resistance protein [Arabidopsis thaliana]
          Length = 585

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYFLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS        S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC   ++  E        
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTR-- 141

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM- 134
             L +S T I   PSSI  +  L  L    C    +  S YL   ++L   + D    + 
Sbjct: 142 -RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPS-YLGHLVSLKSLNLDGCRRLE 199

Query: 135 -LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP +L  L SL  L++S C L     P       S++ L +S+ +   +PA I  L  L
Sbjct: 200 NLPDTLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRISETSIEEIPARICNLSQL 255

Query: 193 EKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
             L + + KRL SLP       ++EK++++GC+ L
Sbjct: 256 RSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290


>gi|104647011|gb|ABF74129.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLRGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L  L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLFRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNL+ LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLRGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104646977|gb|ABF74112.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646979|gb|ABF74113.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646981|gb|ABF74114.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLRGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L  L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLFRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNL+ LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLRGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104646973|gb|ABF74110.1| disease resistance protein [Arabidopsis thaliana]
          Length = 584

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104646937|gb|ABF74092.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646967|gb|ABF74107.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646995|gb|ABF74121.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647009|gb|ABF74128.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLFRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104646939|gb|ABF74093.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFFPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104646997|gb|ABF74122.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIIL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I  LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-ILKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290


>gi|104646931|gb|ABF74089.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646933|gb|ABF74090.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C  L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCXRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDCX---------------------- 172

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 173 --RLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCXRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCXRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|104647019|gb|ABF74133.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647021|gb|ABF74134.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLSRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|356514963|ref|XP_003526171.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 198/442 (44%), Gaps = 71/442 (16%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN--LLETV 69
              ++++  SI  L  L  L LK C +LV +P+ I  L SL+ L+L GC K  N  L E +
Sbjct: 634  VQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNTILGLNSLECLSLSGCSKLYNIHLSEEL 693

Query: 70   GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
                 L++L + G A  C  S    +K  K L +      PS A     F  +L     D
Sbjct: 694  RDARYLKKLRM-GEAPSCSQSIFSFLK--KWLPW------PSMA-----FDKSLEDAHKD 739

Query: 130  LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
                +LPSL  L  + +LDLS C L +  IP   GNLH L+ L L  NNF TLP S+  L
Sbjct: 740  SVRCLLPSLPILSCMRELDLSFCNLLK--IPDAFGNLHCLEKLCLRGNNFETLP-SLKEL 796

Query: 190  FNLEKLKLEDCKRLQSLPQLP-------PNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
              L  L L+ CKRL+ LP+LP       P+  K+R     +   +LG           ++
Sbjct: 797  SKLLHLNLQHCKRLKYLPELPSRTDVPSPSSNKLRWTSVENEEIVLG-----------LN 845

Query: 243  FVDSLKLLGKN---GLAISMLREFLEVVSAPSHKFSI-----VVPGSEIPKWFMYQN--E 292
              +  +L+ ++    + +S + + ++  S P   + I     ++PGS+IP+WF  Q+   
Sbjct: 846  IFNCPELVERDCCTSMCLSWMMQMVQAFSKPKSPWWIPFISSIIPGSKIPRWFDEQHLGM 905

Query: 293  GSSITVTRPS--YLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP-----HPAHVLHCSM 345
            G+ I +   S  ++ + N  +G  AC V  VP     +R    +       P   +    
Sbjct: 906  GNVIKIEHASDHFMQHHNNWIG-IACSVIFVPHKERTMRHPESFTDESDERPCFYIPLLF 964

Query: 346  DEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSF--MDEREKHCPAGSGT---GL 400
             +      SDH+ L Y  R+S+            F  SF   DE +  C +        +
Sbjct: 965  RKDLVTDESDHMLLFYYTRESFT-----------FLTSFEHHDELKVVCASSDPDQYFDV 1013

Query: 401  KVKRCGFHPGYMHEVEEFDETT 422
            +VK+ G+   Y H++E  + TT
Sbjct: 1014 EVKKYGYRRVYRHDLELSNLTT 1035


>gi|104646925|gb|ABF74086.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646929|gb|ABF74088.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646935|gb|ABF74091.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646951|gb|ABF74099.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646959|gb|ABF74103.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646961|gb|ABF74104.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646983|gb|ABF74115.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646989|gb|ABF74118.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647017|gb|ABF74132.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647023|gb|ABF74135.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647027|gb|ABF74137.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647035|gb|ABF74141.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 166/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|297791251|ref|XP_002863510.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309345|gb|EFH39769.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1188

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 166/330 (50%), Gaps = 26/330 (7%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +KE+P  ++ ++ LV L L+GC +L+ LP    ++ SLKTL L GC K    L+T   
Sbjct: 685  TSLKELPDEMKEMTNLVFLNLRGCTSLLSLPKI--TMDSLKTLILSGCSK----LQTFDV 738

Query: 72   V-ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMRRSSD 129
            + E LE L ++GT+I   P +I  +  L  L+ + C    +   C      +  ++ S  
Sbjct: 739  ISEHLESLYLNGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELKSLQELKLSRC 798

Query: 130  LGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLPASIN 187
                M P +   + SL  L L    + E  +P +I +   L+ L LS+N N  TL   + 
Sbjct: 799  SELKMFPDVKKKVESLRVLLLDGTSIAE--MPGNIFDFSLLRRLCLSRNDNIRTLRFDMG 856

Query: 188  CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIID 242
             +F+L+ L+L+ CK L SLP LPPN++ +  +GC SL T+     L     +  S  I  
Sbjct: 857  QMFHLKWLELKWCKNLTSLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFT 916

Query: 243  FVDSLKLLGKNGLAISMLREFLEVVSA----PSHKFSIVV----PGSEIPKWFMYQNEGS 294
                L+ + KN + IS +++  +++SA    P   F  ++    PG EIP WF +Q+ GS
Sbjct: 917  NCHELEQVSKNAI-ISYVQKKSKLMSADRYNPDFVFKSLIGTCFPGCEIPAWFNHQSLGS 975

Query: 295  SITVTRPSYLCNMNQVVGYAACRVFHVPKH 324
             +T+  P       +++G A C V    ++
Sbjct: 976  VLTLELPQDWNAAGKIIGIALCVVVSFKEY 1005


>gi|357449875|ref|XP_003595214.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355484262|gb|AES65465.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1362

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 184/440 (41%), Gaps = 106/440 (24%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-FENL--LETVGQV 72
            E+  SI LL  LV L LK C NLV +P+NI  L SL+ LN+  CFK F N   L T G  
Sbjct: 664  ELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCCFKVFTNSRHLTTPGIS 723

Query: 73   ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            ES+  +  +    +     + L  +L  L+      PP++                    
Sbjct: 724  ESVPRVRSTSGVFK----HVMLPHHLPFLA------PPTNTY------------------ 755

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
                 L  L  L ++D+S C L +  +P  I  LH ++ L L  N+F TLP S+  L  L
Sbjct: 756  -----LHSLYCLREVDISFCRLSQ--VPDTIECLHWVERLNLGGNDFATLP-SLRKLSKL 807

Query: 193  EKLKLEDCKRLQSLPQLP--PNVEKVRVNGCASLVT---LLGALKLRKSSCTIIDFVDSL 247
              L L+ CK L+SLPQLP    + + RV G     T   +    KL +  C         
Sbjct: 808  VYLNLQHCKLLESLPQLPFPTAIGRERVEGGYYRPTGLFIFNCPKLGERECY-------- 859

Query: 248  KLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNM 307
                 + +  S + +F++      ++  IV PGSEIP W   ++ G SI + + S + + 
Sbjct: 860  -----SSMTFSWMMQFIKANPFYLNRIHIVSPGSEIPSWINNKSVGDSIRIDQ-SPIKHD 913

Query: 308  NQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSD------------ 355
            N ++G+  C VF +  H        R+P  AH +   +   F  R SD            
Sbjct: 914  NNIIGFVCCAVFSMAPHRG------RFPSSAH-MELVLKYPFNKRKSDKSLSRITVSVPV 966

Query: 356  --------------HLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLK 401
                          H+W++Y   +SY+   +  FE                  G   G++
Sbjct: 967  ILNGSLVTITTKSSHIWIIYFHCESYHAFREIRFE---------------IFEGQALGME 1011

Query: 402  VKRCGFHPGYMHEVEEFDET 421
            VK CG+      +++EF+ T
Sbjct: 1012 VKSCGYRWVCKQDLQEFNLT 1031


>gi|87162712|gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 167/322 (51%), Gaps = 33/322 (10%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L+ LV+L L  CK L  L S+ + L+SL+ L L GC + E+   T    +++++L 
Sbjct: 520 SILRLNKLVRLNLFYCKALTSLRSDTH-LRSLRDLFLSGCSRLEDFSVTS---DNMKDLA 575

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLP 136
           +S TAI   PSSI  +KNL+TL+   C   N  P+            +   + L A  L 
Sbjct: 576 LSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLH 635

Query: 137 SL-SGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            L SGL SL  L L +C  L E  IP +I  L SL+ L L + +    PASI  L  LEK
Sbjct: 636 ILLSGLASLETLKLEECRNLSE--IPDNISLLSSLRELLLKETDIERFPASIKHLSKLEK 693

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----------LGALKLRK--SSCTII 241
           L ++ C+RLQ++P+LPP+++++    C+SL T+           L A KL     +C  +
Sbjct: 694 LDVKGCRRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQAYKLHTQFQNCVNL 753

Query: 242 DFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF-----SIVVPGSEIPKWFMYQNEGSSI 296
           D + SL+ +  N   ++M +     +S    KF      ++ PGS++P+W MY+   +S+
Sbjct: 754 DEL-SLRAIEVNA-QVNMKKLAYNHLSTLGSKFLDGPVDVIYPGSKVPEWLMYRTTEASV 811

Query: 297 TVTRPSYLCNMNQVVGYAACRV 318
           TV   S     ++ VG+  C V
Sbjct: 812 TVDFSS--APKSKFVGFIFCVV 831


>gi|399920216|gb|AFP55563.1| lrr [Rosa rugosa]
          Length = 407

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 129/306 (42%), Gaps = 79/306 (25%)

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           ++ SL  L  L  L L+DC L EG IP+DIG+L SL  L L  NNFV+LPASI+ L  L 
Sbjct: 118 LIASLKHLSYLRTLKLNDCNLCEGEIPNDIGSLSSLWMLELRGNNFVSLPASIHLLSKLR 177

Query: 194 KLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK 252
            + +E+CKRLQ LP+LP N    V+ N C SL        L + S  ++  V        
Sbjct: 178 VIDVENCKRLQHLPELPVNDSLHVKTNNCTSLQVFPDPPDLYRLSTFLLSCV-------- 229

Query: 253 NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVG 312
           N L+    R F        + F  V+PGSEIP WF  Q+ G S+     SYL  M+ + G
Sbjct: 230 NCLSKETHRSF--------YYFRFVIPGSEIPGWFNNQSVGDSVMR---SYL-RMHVING 277

Query: 313 YAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVK 372
           + A +                                    SDH  L+ LP         
Sbjct: 278 FRAKQNI---------------------------------VSDHFLLVVLP--------- 295

Query: 373 WHFESNHFRLSFMDEREKHC-----------PAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
                NHFR       E  C            AG+   L++K+CG    Y H+ EE    
Sbjct: 296 -----NHFRRPEDCLDEDTCNEVNFVFRSSGTAGNNRCLQIKKCGARVLYEHDTEELISK 350

Query: 422 TKQWTR 427
             Q+ R
Sbjct: 351 MNQYPR 356


>gi|297741885|emb|CBI33320.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 113/228 (49%), Gaps = 33/228 (14%)

Query: 4   LRELLLDKTDIKEMPLSIELL-----------SGLVQLTLKGCKNLVRLPSNINSLKSLK 52
           L ELLL  ++IK++    ++L             L  LTL+GC NL RLP  I   K L+
Sbjct: 400 LVELLLRNSNIKQLWRGNKVLLLLFSYNFSSVPNLEILTLEGCVNLERLPRGIYKWKHLQ 459

Query: 53  TLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS 112
           TL+  GC K E   E  G +  L  LD+SGTAI   PSSI  +  L+TL  + C      
Sbjct: 460 TLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC------ 513

Query: 113 ASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            +     PI++                 L SL  LDL  C + EG IPSDI +L SL+ L
Sbjct: 514 -AKLHKIPIHICH---------------LSSLEVLDLGHCNIMEGGIPSDICHLSSLQKL 557

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
            L + +F ++P +IN L  LE L L  C  L+ +P+LP  +  +  +G
Sbjct: 558 NLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPELPSRLRLLDAHG 605



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P +I  L SL+ L+L  C 
Sbjct: 479 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCN 538

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  +  L+ L+   C+ 
Sbjct: 539 IMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSN 587


>gi|359477827|ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1408

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 138/310 (44%), Gaps = 40/310 (12%)

Query: 13  DIKEMP-LSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           D   +P L I  L G   + LK C NL  LP  I   K L+TL+  GC K E   E  G 
Sbjct: 648 DFSSVPNLEILTLEGCTTV-LKRCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGD 706

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +  L  LD+SGTAI   PSSI  +  L+TL  + C                       L 
Sbjct: 707 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC-----------------------LK 743

Query: 132 ALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
              +P+ +  L SL +LDL  C + EG IPSDI +L SL+ L L + +F ++P +IN L 
Sbjct: 744 LHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLS 803

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLL 250
            LE L L  C  L+ +P+LP  +  +  +G             R SS  +  F+    L+
Sbjct: 804 RLEVLNLSHCNNLEQIPELPSRLRLLDAHGSN-----------RTSSRAL--FLPLHSLV 850

Query: 251 GKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQ 309
                A  + R      S       IV+P ++ IP+W M + +        P      N+
Sbjct: 851 NCFSWAQGLKRTSFSDSSYRGKGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNE 910

Query: 310 VVGYAACRVF 319
            +G+A C V+
Sbjct: 911 FLGFALCCVY 920



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 98/202 (48%), Gaps = 31/202 (15%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            +D+ E+P+ IE    L  L L+ C+NL  LPS+I   KSL TL+  GC + E+  E +  
Sbjct: 1104 SDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 1162

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS-----------SASC- 115
            +ESL +L ++GTAI+  PSSI  ++ L+ L  R C    N P S            + C 
Sbjct: 1163 MESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCP 1222

Query: 116  -YLPFPINLMRRSS---------DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
             +   P NL R  S         D     LPSLSGL SL  L L  C L E   PS+I  
Sbjct: 1223 NFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQGCNLRE--FPSEIYY 1280

Query: 166  LHSLKTLYLSKNNFVTLPASIN 187
            L SL   +  +   +T  A  N
Sbjct: 1281 LSSLGREF--RKTLITFIAESN 1300



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 35/208 (16%)

Query: 137  SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
            S+ G  SL  L  S C   E + P  + ++ SL+ LYL+      +P+SI  L  L+ L 
Sbjct: 1135 SIFGFKSLATLSCSGCSQLE-SFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLL 1193

Query: 197  LEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL-----------------LGALKLRKS 236
            L +CK L +LP+   N+   +   V+ C +   L                 L ++  +  
Sbjct: 1194 LRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLP 1253

Query: 237  SCTIIDFVDSLKLLGKNGLAISMLREF---LEVVSAPSHKF-----SIVVPGSEIPKWFM 288
            S + +  + +LKL G N      LREF   +  +S+   +F     + +   + IP+W  
Sbjct: 1254 SLSGLCSLRTLKLQGCN------LREFPSEIYYLSSLGREFRKTLITFIAESNGIPEWIS 1307

Query: 289  YQNEGSSITVTRPSYLCNMNQVVGYAAC 316
            +Q  G  IT+  P      +  +G+  C
Sbjct: 1308 HQKSGFKITMKLPWSWYENDDFLGFVLC 1335



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++P++I  L SLK L+L  C 
Sbjct: 707 MRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCN 766

Query: 61  KFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
             E  + + +  + SL++L++        P++I  +  L+ L+   CN 
Sbjct: 767 IMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNN 815


>gi|104646991|gb|ABF74119.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 165/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+    E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMXXTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYFLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS        S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC   ++  E        
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTR-- 141

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM- 134
             L +S T I   PSSI  +  L  L    C    +  S YL   ++L   + D    + 
Sbjct: 142 -RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPS-YLGHLVSLKSLNLDGCRRLE 199

Query: 135 -LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP +L  L SL  L++S C L     P       S++ L +S+ +   +PA I  L  L
Sbjct: 200 NLPDTLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRISETSIEEIPARICNLSQL 255

Query: 193 EKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
             L + + KRL SLP       ++EK++++GC+ L
Sbjct: 256 RSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290


>gi|356514941|ref|XP_003526160.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 178/403 (44%), Gaps = 85/403 (21%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFEN--LLETVGQVESLEELDISGTAIRCPPSSI 92
           CKNLV LP++I  L SL+ LNL GC K  N  LL  +   E L+++DI G  I    +S 
Sbjct: 550 CKNLVSLPNSILGLNSLEDLNLSGCSKLYNTELLYELRDAEQLKKIDIDGAPIHFQSTSS 609

Query: 93  FLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           +  ++ K            S SC                  ++PS      + +LDLS C
Sbjct: 610 YSREHKK------------SVSC------------------LMPSSPIFPCMRELDLSFC 639

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP- 211
            L E  IP  IG +  L+ L LS NNF TLP ++  L  L  LKL+ CK+L+SLP+LP  
Sbjct: 640 NLVE--IPDAIGIMCCLQRLDLSGNNFATLP-NLKKLSKLVCLKLQHCKQLKSLPELPSR 696

Query: 212 --NVEKVRVNG-----CASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
             N +++R  G     C  LV         +  CT + F  +++        +  +  F 
Sbjct: 697 IYNFDRLRQAGLYIFNCPELVD--------RERCTDMAFSWTMQ-----SCQVLYIYPFC 743

Query: 265 EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKH 324
            V          V PGSEIP+WF  ++EG+ +++     + + N  +G A C +F VP  
Sbjct: 744 HVSGG-------VSPGSEIPRWFNNEHEGNCVSLDACPVMHDHNW-IGVAFCAIFVVPHE 795

Query: 325 STGIRRFYR----YPHPAHVL---HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES 377
           +     F      YP    +L   +  +D +     SDH+ L  + R  +     +HF  
Sbjct: 796 TLSAMCFSETERIYPDFGDILVDFYGDVDLELVLDKSDHMCLFLVKRMDFI----YHFHL 851

Query: 378 NHFRLSFM----DEREKHCPAGSGTGLKVKRCGFHPGYMHEVE 416
            H  L  +    D+  K   A      +VK+ G+   Y  ++E
Sbjct: 852 KHKYLGRLVLECDDEWKESYA------EVKKYGYRWLYEEDIE 888


>gi|227438235|gb|ACP30607.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1128

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 157/350 (44%), Gaps = 55/350 (15%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE-----NLLETVGQV--------- 72
            L +L+L+GCK+L  LP  +N +KSL  LN+ GC         NL+     +         
Sbjct: 662  LQRLSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHMNLISMKTLILTNCSSLQE 721

Query: 73   -----ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSS------------ 112
                 ++LE L + GTAI   P+++  ++ L  L+ + C      P S            
Sbjct: 722  FRVISDNLETLKLDGTAISQLPANMVKLQRLMVLNLKDCIMLEAVPESLGKLKKLQELVL 781

Query: 113  ASC----YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
            + C      P PI  M+R   L  L+L + +        D+         I   +  L S
Sbjct: 782  SGCSKLKTFPIPIENMKR---LQILLLDTTA------ITDMPKILQFNSQIKCGMNGLSS 832

Query: 169  LKTLYLSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            L+ L LS+NN +T L  +I+ L +L  L ++ CK L S+P LPPN+E +  +GC  L T+
Sbjct: 833  LRHLCLSRNNMITNLQVNISQLHHLRLLDVKYCKNLTSIPLLPPNLEVLDAHGCEKLKTV 892

Query: 228  LGALKLRK-----SSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV-VPGS 281
               L L K      S  I    ++L+ + KN + +   R+  +     S    I   PGS
Sbjct: 893  ATPLALLKLMEQVHSKFIFTNCNNLEQVAKNSITVYAQRKSQQDAGNVSEALLITSFPGS 952

Query: 282  EIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
            E+P WF ++  GSS+ +  P + C+ N++     C V   P     I RF
Sbjct: 953  EVPSWFNHRTIGSSLKLKFPPHWCD-NRLSTIVLCAVVSFPCTQDEINRF 1001


>gi|147771313|emb|CAN73963.1| hypothetical protein VITISV_034210 [Vitis vinifera]
          Length = 1384

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 30/196 (15%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L LKGC+NL  LP +I   K L+TL+   C K +   E  G +  L ELD+SGTAI   P
Sbjct: 537 LILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELP 596

Query: 90  SSIFL--MKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
           SS     +K LK LSF  C   N  P    C                         L SL
Sbjct: 597 SSSSFEHLKALKILSFNRCSKLNKIPIDVCC-------------------------LSSL 631

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
             LDLS C + EG IPSDI  L SLK L L  N+F ++PA+IN L  L+ L L  C+ L+
Sbjct: 632 EVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLE 691

Query: 205 SLPQLPPNVEKVRVNG 220
            +P+LP ++  +  +G
Sbjct: 692 HVPELPSSLRLLDAHG 707



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 71/341 (20%)

Query: 3    CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            C R      +D++E+P+ IE    L  L L+ C+NL  LP++I   K LKT +  GC + 
Sbjct: 918  CRRGGCFKDSDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQL 976

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            E+  E +  +E LE+L++ G+AI+  PSSI  ++ L+ L+   C              +N
Sbjct: 977  ESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRN-----------LVN 1025

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-------- 174
            L     +L +L   +++    L KL            P ++G L SL++L++        
Sbjct: 1026 LPESICNLTSLKTLTITSCPELKKL------------PENLGRLQSLESLHVKDFDSMNC 1073

Query: 175  ------------SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
                        + N   +LP  I+ L  L  L L  CK LQ +P LP +V  V  + C 
Sbjct: 1074 QLPSLSVLLEIFTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIPALPSSVTYVDAHQCT 1133

Query: 223  SLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE 282
            SL          K S +++          K+G     ++EF++      +K  I +P S 
Sbjct: 1134 SL----------KISSSLL-----WSPFFKSG-----IQEFVQ-----RNKVGIFLPESN 1168

Query: 283  -IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
             IP+W  +Q +GS IT+T P      +  +G+A C + HVP
Sbjct: 1169 GIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVP 1208



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 1   MECLRELLLDKTDIKEMP--LSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG 58
           M  LREL L  T I+E+P   S E L  L  L+   C  L ++P ++  L SL+ L+L  
Sbjct: 579 MRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSY 638

Query: 59  CFKFENLLET-VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
           C   E  + + + ++ SL+EL++     R  P++I  +  L+ L+   C  
Sbjct: 639 CNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQN 689


>gi|40644189|emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]
          Length = 1147

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 156/319 (48%), Gaps = 33/319 (10%)

Query: 8   LLDKTDIK------EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           +L+K ++K      E+  SI  L+ L  L L+GC  L  LP +I ++KSL+TLN+ GC +
Sbjct: 665 ILEKLNLKGCSSLVEVHQSIGNLTSLDFLNLEGCWRLKNLPESIGNVKSLETLNISGCSQ 724

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            E L E++G +ESL EL   G       SSI  +K+++ LS RG +  P S+S      +
Sbjct: 725 LEKLPESMGDMESLIELLADGIENEQFLSSIGQLKHVRRLSLRGYSSTPPSSSLISAGVL 784

Query: 122 NLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNF 179
           NL R         LP S     S+ +L+L   GL + A    D   L +L+ L L  N F
Sbjct: 785 NLKR--------WLPTSFIQWISVKRLELPHGGLSDRAAKCVDFSGLSALEVLDLIGNKF 836

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS--- 236
            +LP+ I  L  L+ L ++ CK L S+P LP +++ +  + C SL  +   ++ +K    
Sbjct: 837 SSLPSGIGFLSKLKFLSVKACKYLVSIPDLPSSLDCLDASYCKSLERVRIPIEPKKELDI 896

Query: 237 ---SCTIIDFVDSLKLLGKNGLAIS----------MLREFLEVVSAPSHKFSI-VVPGSE 282
                  ++ +  ++ L  N  ++           + +  +E +    H++ I  +PG  
Sbjct: 897 NLYKSHSLEEIQGIEGLSNNIWSLEVDTSRHSPNKLQKSVVEAICNGRHRYCIHGIPGGN 956

Query: 283 IPKWFMYQNEGSSITVTRP 301
           +P W  Y  EG S++   P
Sbjct: 957 MPNWMSYSGEGCSLSFHIP 975


>gi|82542039|gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1120

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 154/317 (48%), Gaps = 27/317 (8%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L+  + + E+  SIE L+ LV L LKGC +L  LP +I+++KSL+TLN+ GC + 
Sbjct: 648 LEKLILEGCSSLVEVHQSIENLTSLVFLNLKGCWSLKTLPESIDNVKSLETLNISGCSQV 707

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E L E +G +E L EL   G       SSI  +K+ + LS  G +  P S+S      +N
Sbjct: 708 EKLPERMGDMEFLTELLADGIENEQFLSSIGQLKHCRRLSLCGDSSTPPSSSLISTGVLN 767

Query: 123 LMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFV 180
             R         LP S     S+  L+LS+ GL + A    D   L +L+ L L  N F 
Sbjct: 768 WKR--------WLPASFIEWISVKHLELSNSGLSDRATNCVDFSGLSALEKLTLDGNKFS 819

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +LP+ I  L  L +L ++ CK L S+P LP +++++    C SL  +    + +K     
Sbjct: 820 SLPSGIGFLSELRELSVKGCKYLVSIPDLPSSLKRLGACDCKSLKRVRIPSEPKKELYIF 879

Query: 241 IDFVDSLKLLGK-NGLAIS---------------MLREFLEVVSAPSHKFSIVVPGSEIP 284
           +D   SL+      GL+ S               + +  +E +    H + I     ++P
Sbjct: 880 LDESHSLEEFQDIEGLSNSFWYIRVDDRSHSPSKLQKSVVEAMCNGRHGYFIRHTPGQMP 939

Query: 285 KWFMYQNEGSSITVTRP 301
            W  Y+ EG S++   P
Sbjct: 940 NWMSYRGEGRSLSFHIP 956


>gi|224127254|ref|XP_002329438.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870488|gb|EEF07619.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1162

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 159/342 (46%), Gaps = 54/342 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------L 41
            M CLR   L++T IKE+P S+     L  L L GC  + +                   +
Sbjct: 730  MVCLR---LEQTSIKEVPQSVT--GKLKVLDLNGCSKMTKFPEISGDIEQLRLSGTIKEM 784

Query: 42   PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
            PS+I  L  L+ L++ GC K E+  E    +ESL  L +S T I+  PS  F  K++ +L
Sbjct: 785  PSSIQFLTRLEMLDMSGCSKLESFPEITVPMESLRYLFLSKTGIKEIPSISF--KHMTSL 842

Query: 102  SFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPS 161
            +    +G P      LP  I  + R                 L +L+LS C   E + P 
Sbjct: 843  NTLNLDGTPLKE---LPSSIQFLTR-----------------LYELNLSGCSKLE-SFPE 881

Query: 162  DIGNLHSLKTLYLSKNNFVTLPAS-INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
                + SL+ L LSK     +P+S I  L +L  L L D   +++LP+LP  + K+    
Sbjct: 882  ITVPMKSLEVLNLSKTGIKEIPSSLIKHLISLRCLNL-DGTPIKALPELPSLLRKLTTRD 940

Query: 221  CASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPG 280
            CASL T +  +    S    +DF +  KL  K  +A+  L+        P     +V+PG
Sbjct: 941  CASLETTISIINF-SSLWFGLDFTNCFKLDQKPLVAVMHLK-IQSGEEIPDGSIQMVLPG 998

Query: 281  SEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
            SEIP+WF  +  GSS+T+  PS   N +Q+ G A C VF +P
Sbjct: 999  SEIPEWFGDKGVGSSLTIQLPS---NCHQLKGIAFCLVFLLP 1037


>gi|104646949|gb|ABF74098.1| disease resistance protein [Arabidopsis thaliana]
          Length = 585

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 163/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+ +P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S TAIR  P SI  +  L+ L+
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                              N    S  L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IG-----------------NSFYTSEGLLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C                    ++   +++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNC-----------YKXXXXXXXLIHRNMKLESAKPEHXY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P  +  +HCS
Sbjct: 552 PMNSLKIHCS 561



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 17/225 (7%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC      +PS +G+L SLK+L L 
Sbjct: 135 EISYNTRRLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLR-TLPSYLGHLVSLKSLNLD 193

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
                  LP ++  L +LE L++  C  +   P++  N+E +R++
Sbjct: 194 GCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLRIS 238



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEISYNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 FLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P    N+  L+   +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVSTNIEVLR---I 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS             YL   I
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS-----------CFYLTNCI 105

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            L           +P    L SL  + +S C       P +I   ++ + L+LS      
Sbjct: 106 QLKN---------IPIGITLKSLETVGMSGCS-SLKHFP-EIS--YNTRRLFLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|224060457|ref|XP_002300209.1| predicted protein [Populus trichocarpa]
 gi|222847467|gb|EEE85014.1| predicted protein [Populus trichocarpa]
          Length = 614

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 177/440 (40%), Gaps = 99/440 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  +  + L++T I+E+P SIE L GL  LTL  C+NL  +                   
Sbjct: 78  MTSVERVCLNETAIEELPSSIENLVGLQVLTLSFCRNLSSI------------------- 118

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCY 116
                                       PSSI+++++LK L   GC    N P +  +  
Sbjct: 119 ----------------------------PSSIYMLQHLKHLLLEGCSNLKNFPENVGNER 150

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
            P   +++    + G+   P L      T LDL +C L E     +      LK L LS 
Sbjct: 151 QPI-FSMVSLKLNYGSKWFPRL------TCLDLKNCNLLEVDFLMNPDCFSMLKDLDLSG 203

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL---VTLLGALKL 233
           N+F  LP SI     L +LKL +CK L+ +PQLPP+++ +    C SL     L    K+
Sbjct: 204 NSFFRLPTSICSFKKLRRLKLVNCKWLREIPQLPPSIKCIGARDCISLERFSQLTRVFKI 263

Query: 234 RKSS----CTIIDFVDSLKL-------LGKNGLAISMLREFLEVVSAPSHKF------SI 276
            K+        +DF +  KL       L    LA + L E  +V+ A S  F       +
Sbjct: 264 SKAERLKRLHDLDFSNCHKLAENPLSSLTSIALANTSLDEDGDVLDANSDGFCENFRIEV 323

Query: 277 VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPH 336
            +PGSEIP W  Y ++ S ++   PS++    +++    C +  +    T      R   
Sbjct: 324 FLPGSEIPDWMSYYSDESYLSFLVPSHM--YGEIIAVVLCTILSLEDDVTA--NISREVF 379

Query: 337 PAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES-----NHFRLSFMDEREKH 391
               +  S   +F    SDH+WL YLP     C +   F S     + F +SF       
Sbjct: 380 INGQIVISFSRQFFSLESDHMWLYYLP-----CRMIQGFNSLQNDWSRFEVSFR------ 428

Query: 392 CPAGSGTGLKVKRCGFHPGY 411
              G+     +K CG H  Y
Sbjct: 429 -ILGAPMNATLKGCGVHLVY 447


>gi|357500371|ref|XP_003620474.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495489|gb|AES76692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1112

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 195/437 (44%), Gaps = 57/437 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL+L ++ I ++  + + L  L +L L    NLV++  +  +  +L+ L+L  C    
Sbjct: 464 LVELILARSSITQLWTNKKYLPNLRKLDLSHSINLVKII-DFGAFPNLEWLSLEECINLV 522

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            L  ++G +E L  L++ G  ++   P++IF + +L+ L+ RGC+             I+
Sbjct: 523 ELDPSIGLLEKLSYLNLDGCYSLESIPNNIFSLSSLEDLNMRGCSKVFDDPMHLKKPDIS 582

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                      +LP L  L  L  +D+S C L +  +P  I  L SL+ L L  N FVTL
Sbjct: 583 ESASQDSTDTYLLPLLCRLYLLRTVDISFCRLSQ--VPDAIECLSSLERLNLGGNYFVTL 640

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
           P S+  L  L  L LE C+ L+SLPQLP            S  T+    +  K   T + 
Sbjct: 641 P-SLWKLSKLVYLNLEHCELLESLPQLP------------SPTTIGRDRRENKWWTTGLV 687

Query: 243 FVDSLKLLGKN-----GLAISMLREFLEVV--SAPSH--KFSIVVPGSEIPKWFMYQNEG 293
             +  KL          +  S + +F++    S P++  +F IVVPGSEIP W    + G
Sbjct: 688 IFNCPKLAESEREHCRSMTFSWMAQFIKAYPHSYPAYLDEFHIVVPGSEIPNWINNHSMG 747

Query: 294 SSITVT-RPSYLCNMNQVVGYAACRVFHV-PKHSTGIRRFYRYPHPAHVLHCSMDEK--- 348
            SI +   P    N+N ++G+  C VF V P  S     F  +  P   +    D K   
Sbjct: 748 DSIPIEFSPPMHDNINDIIGFVCCAVFSVAPPDSI----FTPWDPPWVRITGISDIKLKI 803

Query: 349 -------FGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLK 401
                  F    S HLW++Y PR S +   K HF+    ++S M               +
Sbjct: 804 PVIINGSFRTTKSSHLWIIYFPRGSRHEFRKIHFDIFSAKISPM---------------R 848

Query: 402 VKRCGFHPGYMHEVEEF 418
           VK CG+     H+++E 
Sbjct: 849 VKSCGYRWVCKHDLQEL 865


>gi|15242338|ref|NP_199336.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759608|dbj|BAB11396.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|332007836|gb|AED95219.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1231

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 25/329 (7%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +KE+P  ++ ++ LV L L+GC +L+ LP    +  SLKTL L GC  F+   E +  
Sbjct: 692  TSLKELPDEMKDMTNLVFLNLRGCTSLLSLPKITTN--SLKTLILSGCSSFQTF-EVIS- 747

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMRRSSDL 130
             E LE L ++GT I   P +I  +  L  L+ + C    +   C      +  ++ S   
Sbjct: 748  -EHLESLYLNGTEINGLPPAIGNLHRLIFLNLKDCKNLATLPDCLGELKSLQELKLSRCS 806

Query: 131  GALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLPASINC 188
               + P ++  + SL  L L    + E  +P  I +L SL+ L LS+N N  TL   +  
Sbjct: 807  KLKIFPDVTAKMESLLVLLLDGTSIAE--LPCSIFHLSSLRRLCLSRNDNIRTLRFDMGH 864

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIIDF 243
            +F+L+ L+L+ CK L SLP LPPN++ +  +GC SL T+     L     +  S  I   
Sbjct: 865  MFHLKWLELKYCKNLTSLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFTN 924

Query: 244  VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV--------VPGSEIPKWFMYQNEGSS 295
               L+ + KN + IS +++  +++SA  +    V         PG EIP WF +Q  GS 
Sbjct: 925  CHELEQVSKNAI-ISYVQKKSKLMSADRYSPDFVYKSLIGTCFPGCEIPAWFNHQALGSV 983

Query: 296  ITVTRPSYLCNMNQVVGYAACRVFHVPKH 324
            + +  P    N ++++G A C V    ++
Sbjct: 984  LILELPQAW-NSSRIIGIALCVVVSFKEY 1011


>gi|255553307|ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223543328|gb|EEF44860.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1186

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 193/445 (43%), Gaps = 68/445 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            +L D  D+ ++  SI  L  L+   LK CKNL +LP  I  L SL+ L L GC     L 
Sbjct: 698  VLKDCKDLVDVDKSIGGLDKLIIFNLKDCKNLKKLPVEITMLHSLEELILSGCLNLVELP 757

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            + +  ++SL  L + G  +    S   + ++ K LS          +  +L     L++R
Sbjct: 758  KDLENLQSLRVLHLDGIPMNQVNS---ITEDFKELSL---------SLQHLTSRSWLLQR 805

Query: 127  SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
             +      L SL     L  L L+DC L +  IP D+  L SL+ L LS N F  LP SI
Sbjct: 806  WAK-SRFSLSSLPRF--LVSLSLADCCLSDNVIPGDLSCLPSLEYLNLSGNPFRFLPESI 862

Query: 187  NCLFNLEKLKLEDCKRLQSLPQLP--------------------PNVEK---VRVNGCAS 223
            N L  L  L L+ C  L+S+P+LP                    PN+ K   + + GC S
Sbjct: 863  NSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERITNLPNLLKSLNLEIFGCDS 922

Query: 224  LVTLLGALKLRKSSCTIIDFVDSLKLLGK-----------NGLAISMLREFLEVVSAPSH 272
            LV + G  KL          + S+ L+             N LA + +R  ++V+     
Sbjct: 923  LVEVQGLFKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALACTEMRTSIQVLQECG- 981

Query: 273  KFSIVVPGSEIPKWFMYQNEGSSITV---TRPSYLCNMNQVVGYAACRVFHVPKHSTGIR 329
             FSI +PG+ IP+WF  ++E SSI+     +P +     ++ G + C ++   K   G  
Sbjct: 982  IFSIFLPGNTIPEWFNQRSESSSISFEVEAKPGH-----KIKGLSLCTLYTYDKLEGG-- 1034

Query: 330  RFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDERE 389
              Y   + A + + ++ EK+ +  S   + +  P +       W F     +L   D  E
Sbjct: 1035 -GYIDENCAKINNKTICEKWTY--SPTFYGMPKPLEEMLWLSHWTFGD---QLEVGD--E 1086

Query: 390  KHCPAGSGTGLKVKRCGFHPGYMHE 414
             H      +GL VK+CG    Y  E
Sbjct: 1087 VHILVEMASGLTVKKCGIRLIYEEE 1111



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 3/138 (2%)

Query: 82  GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGL 141
           G ++   P+ + L K L  L  R  N             + ++  S   G +  P+ +GL
Sbjct: 633 GFSLNALPTDLCLDK-LVALDMRNSNLKYLWKGIRFLVELKVLNLSHSHGLVRTPNFTGL 691

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDC 200
            +L KL L DC      +   IG L  L    L    N   LP  I  L +LE+L L  C
Sbjct: 692 PTLEKLVLKDCK-DLVDVDKSIGGLDKLIIFNLKDCKNLKKLPVEITMLHSLEELILSGC 750

Query: 201 KRLQSLPQLPPNVEKVRV 218
             L  LP+   N++ +RV
Sbjct: 751 LNLVELPKDLENLQSLRV 768


>gi|224103133|ref|XP_002334087.1| predicted protein [Populus trichocarpa]
 gi|222869543|gb|EEF06674.1| predicted protein [Populus trichocarpa]
          Length = 397

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 32/304 (10%)

Query: 75  LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
           L  L +  T I   PS I  +K L  L  R C        C++   + L +R  DL  L 
Sbjct: 4   LRYLYLDQTCITELPSPIGNLKGLACLEVRNCK-YLKDIECFVD--LQLPKRCVDLDCL- 59

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
                      KL+L  C L +  +P  +G L SL+ L LS NN  T+P S+N LF L+ 
Sbjct: 60  ----------RKLNLDGCSLSK--VPGSLGRLSSLEVLDLSGNNLRTIPISMNKLFELQY 107

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNG 254
           L L +C+RL+SLP+LPP + K+  + C  L T+  +    + +     F    +L   N 
Sbjct: 108 LGLRNCRRLESLPELPPRLSKLDAHDCQKLRTVSSSSTGVEGNIFEFIFTRCSRLRETNQ 167

Query: 255 -LAISMLREFL-------EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCN 306
            LA S+L+  L       ++   P    +  +PG   P+WF +Q+ GS++T    SY  N
Sbjct: 168 MLAYSLLKFQLYTKRLCHQLPDVPEGACTFCLPGDVTPEWFSHQSWGSTVTFQLSSYWAN 227

Query: 307 MNQVVGYAACRV--FHVPKHSTGIRRFYRYPHP---AHVLHCSMDEKFGHR--GSDHLWL 359
            N+ +G+  C V  F   +H   ++  Y + +    +H L+C +   +  +   S+H+++
Sbjct: 228 -NEFLGFCLCAVIAFRSFRHGLQVKCTYHFSNEHGDSHDLYCYLHGWYDEKCIESEHIFV 286

Query: 360 LYLP 363
            + P
Sbjct: 287 GFDP 290



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 9/114 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNL--------VRLPSNINSLKSLK 52
           M CLR L LD+T I E+P  I  L GL  L ++ CK L        ++LP     L  L+
Sbjct: 1   MVCLRYLYLDQTCITELPSPIGNLKGLACLEVRNCKYLKDIECFVDLQLPKRCVDLDCLR 60

Query: 53  TLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            LNL GC     +  ++G++ SLE LD+SG  +R  P S+  +  L+ L  R C
Sbjct: 61  KLNLDGC-SLSKVPGSLGRLSSLEVLDLSGNNLRTIPISMNKLFELQYLGLRNC 113


>gi|224122448|ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 937

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 135/291 (46%), Gaps = 35/291 (12%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  LV L LKGC +L  LP ++ S  +L+TLN  GC   E   E +G ++ L E+ 
Sbjct: 673 SIGELKKLVFLNLKGCSSLKNLPESLPS--TLETLNTTGCISLEKFPENLGNMQGLIEVQ 730

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
            + T +   PSSI  +K LK L       P      +LP                  S S
Sbjct: 731 ANETEVHHLPSSIGNLKKLKKLFIVLKQQP------FLPL-----------------SFS 767

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
           GL SLT L +S+  L       ++G+L SL+ L L+ N+F  LPA I  L  LEKL L  
Sbjct: 768 GLSSLTTLHVSNRHLSNSNTSINLGSLSSLQDLKLASNDFSELPAGIGHLPKLEKLDLSA 827

Query: 200 CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISM 259
           C+ L  + ++P ++  +    C SL  + G   +       ++  ++L          + 
Sbjct: 828 CRNLLFISEIPSSLRTLVALDCISLEKIQGLESVENKPVIRMENCNNLS---------NN 878

Query: 260 LREFLEVVSAPSHKFSIVVPGSEIPKWFM-YQNEGSSITVTRPSYLCNMNQ 309
            +E L  V +      IV+PGS++P WF+ YQ + SS T   P+    + Q
Sbjct: 879 FKEILLQVLSKGKLPDIVLPGSDVPHWFIQYQRDRSSSTFRIPAISVGLIQ 929


>gi|297807789|ref|XP_002871778.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317615|gb|EFH48037.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1281

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 192/456 (42%), Gaps = 106/456 (23%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
            L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 815  LRISETSIEEIPARICNLSQLRSLDISENKRLKSLPLSISKLRSLEKLKLSGCSVLESFP 874

Query: 65   ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                  L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 875  PEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPRSIARLTRLQVLA 934

Query: 103  FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                       S Y P           L   + P L+    L  L LS+  + E  IP+ 
Sbjct: 935  I--------GNSLYTP---------EGLLHSLCPPLARFDDLRALSLSNMNMVE--IPNS 975

Query: 163  IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
            IGNL +L  + LS N+F  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 976  IGNLWNLLEIDLSGNSFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHNC 1035

Query: 222  ASLVTLLGALK---LRK---SSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
             SLV++ G      LR+   S+C  +D   + ++L    + +          + P H + 
Sbjct: 1036 TSLVSISGCFNQYCLRQFVASNCYKLD--QAAQILIHCNMKLE--------SAKPEHSY- 1084

Query: 276  IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP 335
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            YP
Sbjct: 1085 --FPGSDIPSCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------YP 1132

Query: 336  HPAHVLHCS-------------MDEKFGHR---------GSDHLWLLYLPRQSYYCNVKW 373
                 +HCS             MDE +            G+DHL L      S  C    
Sbjct: 1133 MNNLKIHCSCILKDADDCELVVMDEVWYPDPKAFTNMCFGTDHLLLF-----SRTCMSMG 1187

Query: 374  HFESNHFRLSFMD-EREKHCPAGSGTGLKVKRCGFH 408
             +    F  S  + E +   P G     +VK+C  H
Sbjct: 1188 AYNEALFEFSIENTEGDSFSPLG-----EVKKCAVH 1218



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 23/228 (10%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  +D++++   I+ L+ L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 604 EFLVELCMSNSDLEKLWDGIQPLTNLKKMDLSRCKYLVEIP-DLSKATNLEELNLSYC-- 660

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC       S  +
Sbjct: 661 -QSLVEVTPSIKNLKGLSCFYMTNCIQLKNIPIGITL-KSLETVRMSGC-------SSLM 711

Query: 118 PFP-INLMRRSSDLGALML----PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            FP I+   R   L +  +     S+S L  L +LD+SDC      +PS + +L SLK+L
Sbjct: 712 HFPEISWNTRRLYLSSTKIEELPSSISRLSCLVELDMSDCQRLR-TLPSYLRHLVSLKSL 770

Query: 173 YLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
            L        LP ++  L +LE L++  C  +   P++  N+E +R++
Sbjct: 771 NLDGCKRLENLPGTLQNLTSLETLEVSGCLNVNEFPRVATNIEVLRIS 818



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    +  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 665 EVTPSIKNLKGLSCFYMTNCIQLKNIPIGI-TLKSLETVRMSGCSSLMHFPEISWNTRRL 723

Query: 60  ----FKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L ELD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 724 YLSSTKIEELPSSISRLSCLVELDMSDCQRLRTLPSYLRHLVSLKSLNLDGC-------- 775

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     +R  +L      +L  L SL  L++S C L     P    N+  L+   +
Sbjct: 776 ----------KRLENLPG----TLQNLTSLETLEVSGC-LNVNEFPRVATNIEVLR---I 817

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP---QLPPNVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL+SLP       ++EK++++GC+ L
Sbjct: 818 SETSIEEIPARICNLSQLRSLDISENKRLKSLPLSISKLRSLEKLKLSGCSVL 870


>gi|104647003|gb|ABF74125.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 164/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  +     P+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSN--MXXXXXPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYFLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS        S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC   ++  E        
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTR-- 141

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM- 134
             L +S T I   PSSI  +  L  L    C    +  S YL   ++L   + D    + 
Sbjct: 142 -RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPS-YLGHLVSLKSLNLDGCRRLE 199

Query: 135 -LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP +L  L SL  L++S C L     P       S++ L +S+ +   +PA I  L  L
Sbjct: 200 NLPDTLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRISETSIEEIPARICNLSQL 255

Query: 193 EKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
             L + + KRL SLP       ++EK++++GC+ L
Sbjct: 256 RSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290


>gi|224127242|ref|XP_002329435.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870485|gb|EEF07616.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 909

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 181/387 (46%), Gaps = 22/387 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++CLR  L   + + E+P S++ L  L ++ L  C NL   P  +   K L+ L +  C 
Sbjct: 471 LQCLR--LAKCSSLTEVPSSLQYLDKLEEIDLFSCYNLRSFP--MLDSKVLRKLVISRCL 526

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                  T+ Q  ++  L +  T+I+  P S+     L+ L   GC  P  +    +   
Sbjct: 527 DVTKC-PTISQ--NMVWLQLEQTSIKEVPQSV--TSKLERLCLNGC--PEITKFPEISGD 579

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  +         +  S+  L  L  LD+S C   E + P   G + SL  L LSK    
Sbjct: 580 IERLELKGTTIKEVPSSIQFLTRLRDLDMSGCSKLE-SFPEITGPMKSLVELNLSKTGIK 638

Query: 181 TLPAS-INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
            +P+S    + +L +LKL D   ++ LP+LPP++  +  + CASL T++  +K+R S   
Sbjct: 639 KIPSSSFKHMISLRRLKL-DGTPIKELPELPPSLWILTTHDCASLETVISIIKIR-SLWD 696

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
           ++DF +  KL  +  L  +M  +       P     +V+PGSEIP+WF  +  GSS+T+ 
Sbjct: 697 VLDFTNCFKL-DQKPLVAAMHLKIQSGDKIPHGGIKMVLPGSEIPEWFGEKGIGSSLTMQ 755

Query: 300 RPSYLCNMNQVVGYAACRVF--HVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHL 357
            PS   N +Q+ G A C VF   +P H    +    +P      +    +   H G D +
Sbjct: 756 LPS---NCHQLKGIAFCLVFLLPLPSHDMPYKVDDLFPVEFRFDYHVKSKNGEHDGDDEV 812

Query: 358 WLLYLPRQSYYCNVKWHFESNHFRLSF 384
            L+ + + +  CN+K   +S+H  L +
Sbjct: 813 VLVSMEKCALTCNMK-TCDSDHMVLHY 838


>gi|16944811|emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 145/320 (45%), Gaps = 56/320 (17%)

Query: 6   ELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           E+ + ++ I+++P +I +  S L +L L G KNL  L  +I  LKSL  L +  C K ++
Sbjct: 725 EIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKS 784

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS-SASCYLPFPINL 123
           L E +G +E+LE L    T I  PPSSI  +  LK L+F             +  FP   
Sbjct: 785 LPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAKQKSEVGLEDEVHFVFP--- 841

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                       P   GL SL  L+LS C L +  +P DIG+L SL+ L L  NNF  LP
Sbjct: 842 ------------PVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNNFEHLP 889

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG-----CASLVTLLGALKLRKSSC 238
            S+  L +L+ L L DCK L  LP+ P  ++ +  +      C SL   + + +     C
Sbjct: 890 QSLTRLSSLQSLDLLDCKSLTQLPEFPRQLDTIYADWNNDSICNSLFQNISSFQ--HDIC 947

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
                 DSL            LR F                   IP+WF +Q +  S++V
Sbjct: 948 A----SDSLS-----------LRVFTN-------------EWKNIPRWFHHQGKDKSVSV 979

Query: 299 TRPS--YLCNMNQVVGYAAC 316
             P   Y+C  +  +G+A C
Sbjct: 980 KLPENWYVC--DNFLGFAVC 997


>gi|356515308|ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 177/425 (41%), Gaps = 69/425 (16%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L EL LD  T+++E+  S+  L  LV+L   GC  L   PS +  L SL++L L  C   
Sbjct: 653  LTELHLDYCTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPSALR-LASLRSLILNWCSSL 711

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +N    +G++++L+ + I  T IR  P SI  +  L+ LS   C          LP   +
Sbjct: 712  QNFPAILGKMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLSLKE-----LPDNFD 766

Query: 123  LMRRSSDLGALMLPSLSGL--------------GSLTKLDLSDCGLGEGAIPSDIGNLHS 168
            +++   +L     P L                 G++  L+L +CGL +  +P        
Sbjct: 767  MLQNLINLDIEGCPQLRSFLTKLRDMGQSTLTFGNIQSLNLENCGLIDEDLPIIFHCFPK 826

Query: 169  LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
            + +L LSKN+FV LP  I     LE L L++CK+LQ +P  PPN++ V    C SL    
Sbjct: 827  VSSLVLSKNDFVALPICIQEFPCLELLHLDNCKKLQEIPGFPPNIQYVNARNCTSLTAES 886

Query: 229  GALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFM 288
              L L + +                         F E       +  ++VPG+ +P+WF 
Sbjct: 887  SNLLLSQET-------------------------FEEC------EMQVMVPGTRVPEWFD 915

Query: 289  YQNEGSSITV-TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDE 347
            +  +G  +T   R  +      ++ +A      + +      RF  Y +   V    M  
Sbjct: 916  HITKGEYMTFWVREKFPAT---ILCFALAVESEMKESFDCEIRF--YINGDEVYELEMPR 970

Query: 348  KFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDER---EKHCPAGSG-TGLKVK 403
             F    +DH+WL  L     + +++W        L  MD+    E  C    G + + V 
Sbjct: 971  NFSDMVTDHVWLYDL---RTHPSIQWR----SLDLYLMDDWNQVEISCEKILGASNVTVS 1023

Query: 404  RCGFH 408
             CG H
Sbjct: 1024 WCGVH 1028


>gi|224109866|ref|XP_002333191.1| predicted protein [Populus trichocarpa]
 gi|222834646|gb|EEE73109.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 180/389 (46%), Gaps = 38/389 (9%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L+D   + E+P S++ L  L +L L  C NL   P  +   K LK L++  C        
Sbjct: 170 LVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFP--MLDSKVLKVLSISRCLDMTKC-P 226

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
           T+ Q  +++ L +  T+I+  P SI     L+ L   GC       S    FP      S
Sbjct: 227 TISQ--NMKSLYLEETSIKEVPQSI--TSKLENLGLHGC-------SKITKFP----EIS 271

Query: 128 SDLGALMLP---------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            D+  L L          S+  L  L  LD+S C   E ++P     + SL +L LSK  
Sbjct: 272 GDVKTLYLSGTAIKEVPSSIQFLTRLEVLDMSGCSKLE-SLPEITVPMESLHSLKLSKTG 330

Query: 179 FVTLPAS-INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
              +P+S I  + +L  LKL D   +++LP+LPP++  +  + CASL T+  ++ + +  
Sbjct: 331 IKEIPSSLIKHMISLRFLKL-DGTPIKALPELPPSLRYLTTHDCASLETVTSSINIGRLE 389

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
             + DF +  KL  +  L  +M  +       P     +V+PGSEIP+WF  +  GSS+T
Sbjct: 390 LGL-DFTNCFKL-DQKPLVAAMHLKIQSGEEIPHGGIQMVLPGSEIPEWFGEKGIGSSLT 447

Query: 298 VTRPSYLCNMNQVVGYAACRVF--HVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSD 355
           +  PS   N +Q+ G A C VF   +P H    +    +P      +    +   H G D
Sbjct: 448 MQLPS---NCHQLKGIAFCLVFLLPLPSHDMPYKVDDLFPVEFRFDYHVKSKNGEHDGDD 504

Query: 356 HLWLLYLPRQSYYCNVKWHFESNHFRLSF 384
            + L+ + + +  CN+K   +S+H  L +
Sbjct: 505 EVVLVSMEKCALTCNMKT-CDSDHMVLHY 532



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 24/135 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR--------------------LPS 43
           ++ L L++T IKE+P SI   S L  L L GC  + +                    +PS
Sbjct: 232 MKSLYLEETSIKEVPQSIT--SKLENLGLHGCSKITKFPEISGDVKTLYLSGTAIKEVPS 289

Query: 44  NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
           +I  L  L+ L++ GC K E+L E    +ESL  L +S T I+  PSS  L+K++ +L F
Sbjct: 290 SIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSS--LIKHMISLRF 347

Query: 104 RGCNGPPSSASCYLP 118
              +G P  A   LP
Sbjct: 348 LKLDGTPIKALPELP 362


>gi|16944812|emb|CAC82812.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1101

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 145/320 (45%), Gaps = 56/320 (17%)

Query: 6   ELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           E+ + ++ I+++P +I +  S L +L L G KNL  L  +I  LKSL  L +  C K ++
Sbjct: 700 EIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKS 759

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS-SASCYLPFPINL 123
           L E +G +E+LE L    T I  PPSSI  +  LK L+F             +  FP   
Sbjct: 760 LPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAKQKSEVGLEDEVHFVFP--- 816

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                       P   GL SL  L+LS C L +  +P DIG+L SL+ L L  NNF  LP
Sbjct: 817 ------------PVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNNFEHLP 864

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG-----CASLVTLLGALKLRKSSC 238
            S+  L +L+ L L DCK L  LP+ P  ++ +  +      C SL   + + +     C
Sbjct: 865 QSLTRLSSLQSLDLLDCKSLTQLPEFPRQLDTIYADWNNDSICNSLFQNISSFQ--HDIC 922

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
                 DSL            LR F                   IP+WF +Q +  S++V
Sbjct: 923 A----SDSLS-----------LRVFTN-------------EWKNIPRWFHHQGKDKSVSV 954

Query: 299 TRPS--YLCNMNQVVGYAAC 316
             P   Y+C  +  +G+A C
Sbjct: 955 KLPENWYVC--DNFLGFAVC 972


>gi|296089435|emb|CBI39254.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 162/368 (44%), Gaps = 74/368 (20%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +K +P SI+ L  L  L L  C+NLVRLP +I SL SL+TL L GC KF+      G 
Sbjct: 60  SKLKGLPSSIKHLKALKNLDLSSCENLVRLPESICSLSSLETLFLNGCLKFKGFPGVKGH 119

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG---CNGPPSSASCYLPFPIN------ 122
           + +L  L +  TAI+  PSSI  +K L+ L+       + P S  S      IN      
Sbjct: 120 MNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSRSSIVSLPESICSLTSLKTINVDECSA 179

Query: 123 LMRRSSDLGAL----------------MLPSLSGLGSLTKLDLSDCGLGEG--------- 157
           L +   DLG L                ++   S L SL  L L DC L +G         
Sbjct: 180 LHKLPEDLGELSRLEILSFSYIRCDLPLIKRDSRLSSLKTLILIDCNLKDGVVLDICHLL 239

Query: 158 -------------AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
                         IP+DI  L SL+ L L  N+F ++PA I+ L++L  L L  C +LQ
Sbjct: 240 SLKELHLSSCNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLYHLTSLNLRHCNKLQ 299

Query: 205 SLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
            +P+LP ++  + V+G +   +   +  +R++      F DS      NG+         
Sbjct: 300 QVPELPSSLRLLDVHGPSDGTS---SSPIRRNWNGAY-FSDS--WYSGNGIC-------- 345

Query: 265 EVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAA-CRVFHVP 322
                      IV+PGS  IPKW   + +GS I +  P      N  +G+A  C    VP
Sbjct: 346 -----------IVIPGSSGIPKWIKNKRKGSEIEIGLPQNWHLNNDFLGFALYCVYAPVP 394

Query: 323 KHSTGIRR 330
            +   + R
Sbjct: 395 SNLEAMIR 402



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 29/211 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LRE     T I E+PLSI+ L+GL +L L+ CK LV    NI SL SLK+L L GC 
Sbjct: 1   MGKLREFNFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCS 60

Query: 61  KFENLLETVGQVESLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
           K + L  ++  +++L+ LD+S     +R  P SI  + +L+TL   GC            
Sbjct: 61  KLKGLPSSIKHLKALKNLDLSSCENLVRL-PESICSLSSLETLFLNGC------------ 107

Query: 119 FPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                      L     P + G + +L  L L    + E  IPS I +L +L+ L LS++
Sbjct: 108 -----------LKFKGFPGVKGHMNNLRVLRLDSTAIKE--IPSSITHLKALEYLNLSRS 154

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           + V+LP SI  L +L+ + +++C  L  LP+
Sbjct: 155 SIVSLPESICSLTSLKTINVDECSALHKLPE 185


>gi|147859369|emb|CAN83953.1| hypothetical protein VITISV_018322 [Vitis vinifera]
          Length = 996

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 154/333 (46%), Gaps = 42/333 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L L+ + IKE+   I  L  LV L L  CKNL  +PS I  L+SL+   L  C 
Sbjct: 600 MENLDRLNLEDSGIKELSCLIGHLPRLVSLELSKCKNLRSVPSGILQLESLRMCYLFDC- 658

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLM----KNLKTLSFRGCNGPPSSASCY 116
              NL+  +  +E  + L +  +AI   PSSI LM    +NL+TL        P+S    
Sbjct: 659 --SNLI--MEDMEHSKGLSLRESAITELPSSIRLMLSNCENLETL--------PNSIG-- 704

Query: 117 LPFPINLMRRSSDLGALMLPSLSGL------GSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                  M R S+L     P L  L        LT+L++S C L  GAIP D+  L SLK
Sbjct: 705 -------MTRVSELVVHNCPKLHKLPDNLRSMQLTELNVSGCNLMAGAIPDDLWCLFSLK 757

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA 230
            L +S NN   +P  I  L  L  L + +C  L+ +P+LP ++ ++   GC  L TL   
Sbjct: 758 DLNVSGNNIDCIPGGIIRLSRLRYLTMNNCLMLKEIPELPSSLRQIEAYGCPLLETLSSD 817

Query: 231 LKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMY 289
            K    S         ++       +   +R++L+V         +V+PGS  IP+W  +
Sbjct: 818 AKHPLWSSLHNCLKSRIQDFECPTDSEDWIRKYLDV--------QVVIPGSRGIPEWISH 869

Query: 290 QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
           ++ G  IT+  P      N  +G+A     HVP
Sbjct: 870 KSMGHEITIDLPKNWYEDNNFLGFALFW-HHVP 901



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 51/236 (21%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  + L  ++IKE+ +  + L+ L  + L   + L ++P  ++ +  L+ LNL GC  
Sbjct: 433 EKLVAISLKNSNIKELLIGEKCLAELKFIDLSNSQQLSKIPK-LSRMPKLEILNLGGCVN 491

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
           F  L  ++G+                     F MK L+ L+FR                 
Sbjct: 492 FCKLHSSIGK--------------------FFEMKFLRVLNFR----------------- 514

Query: 122 NLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  + G   LPS +  L SL  L LS C   E    +    +  L+ L LS +   
Sbjct: 515 -------ESGIRELPSSIGSLTSLESLWLSKCSKFEKFPDNFFVTMRRLRILGLSDSGIK 567

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV-RVN----GCASLVTLLGAL 231
            LP SI CL  LE L L++C   +  P++  N+E + R+N    G   L  L+G L
Sbjct: 568 ELPTSIECLEALEVLLLDNCSNFEKFPEIQKNMENLDRLNLEDSGIKELSCLIGHL 623


>gi|296088756|emb|CBI38206.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 122/232 (52%), Gaps = 13/232 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L  L+L  T IKE+P SI  L+GL +L+L  CKNL RLPS+I  L+ L  + L GC 
Sbjct: 119 MKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCS 178

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
             E   + +  +E++  L++ GT+++  P SI  +K L+ L    C      PSS     
Sbjct: 179 NLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEELDLTNCENLVTLPSSICNIR 238

Query: 118 PFPINLMRRSSDLG-------ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                +++  S L         L    + GL SL  L+LS C L  GAIPSD+  L SL+
Sbjct: 239 SLERLVLQNCSKLQELPKNPMTLQCSDMIGLCSLMDLNLSGCNLMGGAIPSDLWCLSSLR 298

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
            L LS +N   +P+ I+    L  L+L  CK L+S+ +LP ++  +  + C 
Sbjct: 299 RLNLSGSNIRCIPSGIS---QLRILQLNHCKMLESITELPSSLRVLDAHDCT 347



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 43/248 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR++ L+++ IKE+P SIE L                        +SL+ L L  C 
Sbjct: 72  MRHLRKIYLNQSGIKELPTSIEFL------------------------ESLEMLQLANCS 107

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYL 117
            FE   E    ++SL  L + GTAI+  PSSI+ +  L+ LS   C      PSS  C L
Sbjct: 108 NFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSI-CRL 166

Query: 118 PFPINL-MRRSSDLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            F   + +   S+L A   ++  +  +G   +L+L    L E  +P  I +L  L+ L L
Sbjct: 167 EFLHGIYLHGCSNLEAFPDIIKDMENIG---RLELMGTSLKE--LPPSIEHLKGLEELDL 221

Query: 175 SK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
           +   N VTLP+SI  + +LE+L L++C +LQ LP+ P  ++      C+ ++ L   + L
Sbjct: 222 TNCENLVTLPSSICNIRSLERLVLQNCSKLQELPKNPMTLQ------CSDMIGLCSLMDL 275

Query: 234 RKSSCTII 241
             S C ++
Sbjct: 276 NLSGCNLM 283


>gi|224094841|ref|XP_002334784.1| predicted protein [Populus trichocarpa]
 gi|222874625|gb|EEF11756.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 21/240 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P SI  L  L  L LKGC  L  LP NI++LKSL  L+L GC    +L +++G 
Sbjct: 169 SGLASLPDSIGALKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGA 228

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR---- 126
           ++SL+ L + G + +   P SI  +K++++L   GC+G  S     LP  I  ++     
Sbjct: 229 LKSLDSLHLYGCSGLASLPDSIGALKSIESLYLYGCSGLAS-----LPDNIGALKSLEWL 283

Query: 127 --SSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
             S   G   LP S+  L SL  L LS C  G  ++P  IG L SL+ L+L   +   +L
Sbjct: 284 HLSGCSGLASLPDSIGALKSLKSLHLSGCS-GLASLPDSIGALKSLEWLHLYGCSGLASL 342

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKS 236
           P SI  L +LE L L  C  L SLP       ++E + + GC+ L +L   +GALK  KS
Sbjct: 343 PDSIGALKSLESLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKS 402



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 131/247 (53%), Gaps = 21/247 (8%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R  L   + +  +P SI  L  L  L L GC  L  LP NI +LKSL+ L+L GC    +
Sbjct: 66  RAYLYGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDNIGALKSLEWLHLSGCSGLAS 125

Query: 65  LLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           L +++G ++SLE L ++G + +   P SI  +K+L++L   GC+G  S     LP  I  
Sbjct: 126 LPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLAS-----LPDSIGA 180

Query: 124 MR--RSSDL----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
           ++  +S DL    G   LP ++  L SL  L L  C  G  ++P  IG L SL +L+L  
Sbjct: 181 LKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCS-GLASLPDSIGALKSLDSLHLYG 239

Query: 177 -NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LG 229
            +   +LP SI  L ++E L L  C  L SLP       ++E + ++GC+ L +L   +G
Sbjct: 240 CSGLASLPDSIGALKSIESLYLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIG 299

Query: 230 ALKLRKS 236
           ALK  KS
Sbjct: 300 ALKSLKS 306



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 125/240 (52%), Gaps = 21/240 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P SI  L  L  L L GC  L  LP +I +LKS+++L L GC    +L + +G 
Sbjct: 217 SGLASLPDSIGALKSLDSLHLYGCSGLASLPDSIGALKSIESLYLYGCSGLASLPDNIGA 276

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++SLE L +SG + +   P SI  +K+LK+L   GC+G  S     LP  I  ++    L
Sbjct: 277 LKSLEWLHLSGCSGLASLPDSIGALKSLKSLHLSGCSGLAS-----LPDSIGALKSLEWL 331

Query: 131 ------GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
                 G   LP S+  L SL  L LS C  G  ++P  IG L SL+ L+L   +   +L
Sbjct: 332 HLYGCSGLASLPDSIGALKSLESLHLSGCS-GLASLPDSIGALKSLEWLHLYGCSGLASL 390

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKS 236
           P SI  L +L+ L L  C  L SLP       ++E + + GC+ L +L   +GALK  KS
Sbjct: 391 PDSIGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKS 450



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 31/260 (11%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P SI  L  L  L L GC  L  LP +I +LKSL++L+L GC    +L +++G 
Sbjct: 121 SGLASLPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLASLPDSIGA 180

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++SL+ LD+ G + +   P +I  +K+L  L   GC+G  S     LP  I  ++    L
Sbjct: 181 LKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLAS-----LPDSIGALKSLDSL 235

Query: 131 ------GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
                 G   LP S+  L S+  L L  C  G  ++P +IG L SL+ L+LS  +   +L
Sbjct: 236 HLYGCSGLASLPDSIGALKSIESLYLYGCS-GLASLPDNIGALKSLEWLHLSGCSGLASL 294

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKS 236
           P SI  L +L+ L L  C  L SLP       ++E + + GC+ L +L   +GALK    
Sbjct: 295 PDSIGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALK---- 350

Query: 237 SCTIIDFVDSLKLLGKNGLA 256
                  ++SL L G +GLA
Sbjct: 351 ------SLESLHLSGCSGLA 364



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 15/215 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P +I  L  L  L L GC  L  LP +I +LKSLK+L+L GC    +L +++G 
Sbjct: 265 SGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIGALKSLKSLHLSGCSGLASLPDSIGA 324

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++SLE L + G + +   P SI  +K+L++L   GC+G  S     LP  I  ++    L
Sbjct: 325 LKSLEWLHLYGCSGLASLPDSIGALKSLESLHLSGCSGLAS-----LPDSIGALKSLEWL 379

Query: 131 ------GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
                 G   LP S+  L SL  L LS C  G  ++P  IG L SL+ L+L   +   +L
Sbjct: 380 HLYGCSGLASLPDSIGALKSLKSLHLSGCS-GLASLPDSIGALKSLEWLHLYGCSGLASL 438

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           P SI  L +L+ L L  C  L SLP     ++ ++
Sbjct: 439 PDSIGALKSLKSLHLYGCSGLASLPDTIGALKSLK 473



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 25/189 (13%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P SI  L  L  L L GC  L  LP +I +LKSL++L+L GC    +L +++G 
Sbjct: 313 SGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLESLHLSGCSGLASLPDSIGA 372

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++SLE L + G + +   P SI  +K+LK+L   GC+G  S     LP  I  ++     
Sbjct: 373 LKSLEWLHLYGCSGLASLPDSIGALKSLKSLHLSGCSGLAS-----LPDSIGALK----- 422

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
                       SL  L L  C  G  ++P  IG L SLK+L+L   +   +LP +I  L
Sbjct: 423 ------------SLEWLHLYGCS-GLASLPDSIGALKSLKSLHLYGCSGLASLPDTIGAL 469

Query: 190 FNLEKLKLE 198
            +L+ L L+
Sbjct: 470 KSLKSLDLK 478



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 119/262 (45%), Gaps = 61/262 (23%)

Query: 37  NLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE------SLEELDISG-------- 82
            L  LP NI+ LKSL  L+L  C K  +L  ++G VE      SL  L  S         
Sbjct: 2   ELASLPDNIDELKSLVELHLYACSKLASLPNSIGNVEISRLASSLWLLRTSKSTGQHWRV 61

Query: 83  -----------TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR----- 126
                      + +   P SI  +K+L+ L   GC+G  S     LP  I  ++      
Sbjct: 62  EISRRAYLYGCSGLASLPDSIGALKSLEWLHLYGCSGLAS-----LPDNIGALKSLEWLH 116

Query: 127 -SSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLP 183
            S   G   LP S+  L SL  L L+ C  G  ++P  IG L SL++L+L   +   +LP
Sbjct: 117 LSGCSGLASLPDSIGALKSLESLHLTGCS-GLASLPDSIGALKSLESLHLYGCSGLASLP 175

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR------VNGCASLVTL---LGALKLR 234
            SI  L +L+ L L+ C  L SLP    N++ ++      + GC+ L +L   +GALK  
Sbjct: 176 DSIGALKSLQSLDLKGCSGLASLPD---NIDALKSLDWLHLYGCSGLASLPDSIGALK-- 230

Query: 235 KSSCTIIDFVDSLKLLGKNGLA 256
                    +DSL L G +GLA
Sbjct: 231 --------SLDSLHLYGCSGLA 244


>gi|227438149|gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1084

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 145/317 (45%), Gaps = 29/317 (9%)

Query: 20  SIELLSG-LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEEL 78
           SI++L G L+ L L GC  L  LP  + +LK L+TL L GC + E L + +G++ESL  L
Sbjct: 607 SIKVLQGSLILLNLSGCIKLGELPLELYTLKLLETLILSGCSQLERLDDALGELESLTIL 666

Query: 79  DISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSL 138
               TAI   PSS      LK LS  GC         +          SS +  L   SL
Sbjct: 667 KADYTAITQIPSS---SDQLKELSLHGCK------ELWKDRQYTNSDESSQVALLSPLSL 717

Query: 139 SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           +GL  L  L L  C L +  +P ++G+L SL+ L L  NNF  L      L +L+ LKL+
Sbjct: 718 NGLICLRTLRLGYCNLSDELVPVNLGSLSSLEELDLQGNNFRNLQTDFAGLPSLQILKLD 777

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASL--------VTLLGALKLRKSSCTIIDFVDSLKLL 250
           +C  L+S+  LP  +  +    C  L         ++L +L L  ++C  +     L+ L
Sbjct: 778 NCSELRSMFSLPKKLRSLYARNCTVLERTPDLKECSVLQSLHL--TNCYNLVETPGLEEL 835

Query: 251 GKNGLAISML--------REFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPS 302
              G+    +        RE +    A      + VPGS IP W  ++N   SI+ T P 
Sbjct: 836 KTVGVIHMEMCNNVPYSDRERIMQGWAVGANGGVFVPGSTIPDWVNFKNGTRSISFTVPE 895

Query: 303 YLCNMNQVVGYAACRVF 319
              N + +VG+     +
Sbjct: 896 PTLN-SVLVGFTVWTTY 911


>gi|15238668|ref|NP_197290.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005098|gb|AED92481.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1197

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 169/340 (49%), Gaps = 44/340 (12%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L+  T +KEM + +E +  LV L L+GC +L  LP     L SLKTL L GC KF
Sbjct: 685  LQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLILSGCSKF 742

Query: 63   ENLLETVGQV--ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +       QV  + LE L + GTAI+  P  I  ++ L  L+ +GC          LP  
Sbjct: 743  KTF-----QVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKR-----LPDS 792

Query: 121  INLMRRSSDLGALMLPSLSGL-------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +  ++    L  L+L   S L       G++++L++    L E AI  D+  + S++ L 
Sbjct: 793  LGQLKA---LEELILSGCSKLNEFPETWGNMSRLEI--LLLDETAI-KDMPKILSVRRLC 846

Query: 174  LSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT----LL 228
            L+KN  ++ LP  +N    L+ L L+ CK L  +PQLPPN++ + V+GC+SL T    L+
Sbjct: 847  LNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAKPLV 906

Query: 229  GALKLRK-SSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA---------PSHKFSIVV 278
             ++ ++  +S  I    + L+   K  + +   R+   + SA         P   F    
Sbjct: 907  CSIPMKHVNSSFIFTNCNELEQAAKEEIVVYAERKCHLLASALKRCDESCVPEILFCTSF 966

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            PG E+P WF +   GS +    P +  N N++ G A C V
Sbjct: 967  PGCEMPSWFSHDAIGSMVEFELPPHW-NHNRLSGIALCVV 1005


>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
          Length = 2816

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 186/449 (41%), Gaps = 67/449 (14%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L EL+LD  T++  +  S+  L  L  L++  C  L   P+ I  L SL+TL+L GC   
Sbjct: 652  LEELVLDGCTNLCHLHSSLGRLRKLAFLSVSNCIKLRDFPA-IYKLVSLQTLDLSGCSNL 710

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +   +    +  L +L + GTAI   P+SI     L  L    C         +LP  I 
Sbjct: 711  QKFPDISQHMPCLSKLYLDGTAITEIPASIAYASELVLLDLTNCKELK-----FLPSSI- 764

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE--GAIPSDIGNLHSLKTLYLSKNNFV 180
                   L  L + +LSG   L K   +   L    G   S +G L SLK+L LS N F+
Sbjct: 765  -----PKLTLLRILTLSGCSKLGKFQQNSGNLDRLSGKRLSHLGILSSLKSLNLSGNRFI 819

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL------------ 228
             LP     L NL +L L DC+RLQ+LP LPP+V  +  + C SL ++L            
Sbjct: 820  HLPCIFKGLSNLSRLDLHDCRRLQTLPLLPPSVRILNASNCTSLESILPESVFMSFRGCL 879

Query: 229  --GALKLRKSSCTIIDFVDSLKL-LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
                L+L K   T+   + S+   + +     +   E+      P   FS VVPGS IP 
Sbjct: 880  FGNCLRLMKYPSTMEPHIRSMATHVDQERWRSTYDEEYPSFAGIP---FSNVVPGSGIPD 936

Query: 286  WFMYQNEGSSITVT-----RPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY------ 334
            WF  + EG  I +        S   + N  +G A   V   P+     R +Y Y      
Sbjct: 937  WFRDRREGHDINIEVHQNWYSSTPGSNNNFLGLALSAVV-APQDGFLGRGWYPYCDLYTQ 995

Query: 335  --PHPAHVLHCSMDEKFGHR------GSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMD 386
              P       CS  +   ++       SDHLWL Y+P    +   KW    +  + SF  
Sbjct: 996  NDPKSESSHICSFTDGRTYQLEHTPIESDHLWLAYVPSFFSFSCEKW----SCIKFSF-- 1049

Query: 387  EREKHCPAGSGTGLKVKRCGFHPGYMHEV 415
                    G+     VK CG  P Y+ + 
Sbjct: 1050 --------GTSGECVVKSCGVCPVYIKDT 1070



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 15/128 (11%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CLR L LD T I E+P SI   + LV L LK C+ L+ LPS+I+ L  L+TL+L GC 
Sbjct: 1850 MPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISKLTLLETLSLSGCL 1909

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                     G +++L             P ++  + +L+ L  + C+G PS  +  LP  
Sbjct: 1910 DLGKCQVNSGNLDAL-------------PQTLDRLCSLRRLELQNCSGLPSLPA--LPSS 1954

Query: 121  INLMRRSS 128
            + L+  S+
Sbjct: 1955 VELINASN 1962



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 111/295 (37%), Gaps = 62/295 (21%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG---------CFKFENLLETVGQVESLEE 77
            ++ L L G K +    +    +  L+ L ++          C K E        +  L  
Sbjct: 1796 VIVLNLTGLKEIRFTTAAFAKMTKLRMLIIISECSANQMQCCSKLEKSPVISQHMPCLRR 1855

Query: 78   LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
            L + GTAI   PSSI     L  L  + C    S     LP  I      S L  L   S
Sbjct: 1856 LCLDGTAITELPSSIAYATQLVLLDLKNCRKLLS-----LPSSI------SKLTLLETLS 1904

Query: 138  LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            LSG      LDL  C +  G                    N   LP +++ L +L +L+L
Sbjct: 1905 LSGC-----LDLGKCQVNSG--------------------NLDALPQTLDRLCSLRRLEL 1939

Query: 198  EDCKRLQSLPQLPPNVEKVRVNGCASLV-------------TLLG-ALKLRKSSCTIIDF 243
            ++C  L SLP LP +VE +  + C SL              ++ G   KL K   T+   
Sbjct: 1940 QNCSGLPSLPALPSSVELINASNCKSLEDISPQSVFLCFGGSIFGNCFKLSKYPSTMERD 1999

Query: 244  VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
            +  +          S   +    V  P   FS V PGS IP WF ++++G  I +
Sbjct: 2000 LQRMAAHANQERWWSTFEQQNPNVQVP---FSTVFPGSRIPDWFKHRSQGHEINI 2051


>gi|10177889|dbj|BAB11221.1| disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 169/340 (49%), Gaps = 44/340 (12%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L+  T +KEM + +E +  LV L L+GC +L  LP     L SLKTL L GC KF
Sbjct: 688  LQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLILSGCSKF 745

Query: 63   ENLLETVGQV--ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +       QV  + LE L + GTAI+  P  I  ++ L  L+ +GC          LP  
Sbjct: 746  KTF-----QVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKR-----LPDS 795

Query: 121  INLMRRSSDLGALMLPSLSGL-------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +  ++    L  L+L   S L       G++++L++    L E AI  D+  + S++ L 
Sbjct: 796  LGQLKA---LEELILSGCSKLNEFPETWGNMSRLEI--LLLDETAI-KDMPKILSVRRLC 849

Query: 174  LSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT----LL 228
            L+KN  ++ LP  +N    L+ L L+ CK L  +PQLPPN++ + V+GC+SL T    L+
Sbjct: 850  LNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAKPLV 909

Query: 229  GALKLRK-SSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA---------PSHKFSIVV 278
             ++ ++  +S  I    + L+   K  + +   R+   + SA         P   F    
Sbjct: 910  CSIPMKHVNSSFIFTNCNELEQAAKEEIVVYAERKCHLLASALKRCDESCVPEILFCTSF 969

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            PG E+P WF +   GS +    P +  N N++ G A C V
Sbjct: 970  PGCEMPSWFSHDAIGSMVEFELPPHW-NHNRLSGIALCVV 1008


>gi|357458903|ref|XP_003599732.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|357474669|ref|XP_003607619.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355488780|gb|AES69983.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355508674|gb|AES89816.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1058

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 191/428 (44%), Gaps = 88/428 (20%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-FENLLETVGQVES 74
            +M  SI +L  LV L LK CK L+ +P NI  L SL+ LNL GC K F+N          
Sbjct: 661  QMGPSIGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKVFKN-------PRQ 713

Query: 75   LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
            L + D S ++     ++  ++K  + + F          S Y P+         D+ +  
Sbjct: 714  LRKHDSSESSSHFQSTTSSILKWTR-IHFH---------SLY-PYA------HKDIASRF 756

Query: 135  LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            L SL  L  L  LD+S CG+ +  +P+ IG L  L+ L L  NNFVT+P S+  L  L  
Sbjct: 757  LHSLLSLSCLNDLDISFCGISQ--LPNAIGRLRWLERLNLGGNNFVTVP-SLRKLSRLAY 813

Query: 195  LKLEDCKRLQSLPQLP-----------PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
            L L+ CK L+SLPQLP            N++K +      LV +    KL +  C     
Sbjct: 814  LNLQHCKLLKSLPQLPFATAIEHDLHINNLDKNKSWKSKGLV-IFNCPKLGERECW---- 868

Query: 244  VDSLKLLGKNGLAISMLREFLEVV-SAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPS 302
                     N +  S + + +     + S    IV PGSEIP WF  Q+   S+++    
Sbjct: 869  ---------NSMIFSWMIQLIRANPQSSSDVIQIVTPGSEIPSWFNNQSNSRSLSIALSP 919

Query: 303  YLCN--MNQVVGYAACRVFHVPKHST--------GI--------RRFYRYPHPAHVLHCS 344
             + +   N  +G A C VF V   +T        GI        RR+Y       ++  S
Sbjct: 920  VMHDDTDNNFIGIACCAVFSVSPTTTTYAKTPAIGINFSNRNTRRRWY------GIISVS 973

Query: 345  MDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES----NHFRLSFMDEREKHCPAGSGTGL 400
            ++       SDH+ L+Y P +S++  +K+  E+    ++FR+ F     K      G   
Sbjct: 974  LERYLIEVKSDHMCLIYFPLESFFNILKFIDETLENLDNFRMKFSIMNPK------GLHT 1027

Query: 401  KVKRCGFH 408
            KV+ CG+H
Sbjct: 1028 KVQSCGYH 1035


>gi|255542420|ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223548234|gb|EEF49725.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 47/333 (14%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
            L  L +L LK C NLV +  +I +L+ L  LNL  C +   L   +  + SLE+L +SG 
Sbjct: 693  LPNLERLKLKSCINLVEVHKSIENLEKLVLLNLKDCKRLRKLPRKIVLLRSLEKLILSGC 752

Query: 83   TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS---SDLGALMLPSLS 139
            + +    S +  M++LK L   G     ++ S  L F   L RR    S L    LP   
Sbjct: 753  SELDKLSSELRKMESLKVLHMDGFKHY-TAKSRQLTFWSWLSRRQGMDSSLALTFLPC-- 809

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
               SL  L L+DC L +  +  D+  L SLK L LS N+   LP +I+ L  LE L L++
Sbjct: 810  ---SLDHLSLADCDLSDDTV--DLSCLSSLKCLNLSGNSISCLPKTISGLTKLESLVLDN 864

Query: 200  CKRLQSLPQLPPNVEKVRVNGCASLV------TLLGALKLRKSSC-TIIDFVDSLKLLGK 252
            C+ LQSL +LP ++ ++    C SL        L+ +L+L  + C  +++     KL   
Sbjct: 865  CRSLQSLSELPASLRELNAENCTSLERITNLPNLMTSLRLNLAGCEQLVEVQGFFKLEPI 924

Query: 253  N---------------GLAISMLREFLEVVSAPSHKF-----------SIVVPGSEIPKW 286
            N               G   ++  E   V++  S              SI +PGSE+P W
Sbjct: 925  NNHDKEMANMLGLFNLGPVETIKVEMFSVMTMTSRITPPKVLHECGICSIFLPGSEVPGW 984

Query: 287  FMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            +  QNEG  I+ T P    ++ +V G   C V+
Sbjct: 985  YSPQNEGPLISFTMPP--SHVRKVCGLNICIVY 1015



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 37/164 (22%)

Query: 95  MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
           ++NL  L  R  N   +         + ++  S   G +  P LSGL +L +L L  C  
Sbjct: 647 LENLVVLDMRYSNLKHAWIGARGLKQLKILDFSHSYGLVSTPDLSGLPNLERLKLKSCI- 705

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPP 211
                                  N V +  SI  L  L  L L+DCKRL+ LP+   L  
Sbjct: 706 -----------------------NLVEVHKSIENLEKLVLLNLKDCKRLRKLPRKIVLLR 742

Query: 212 NVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGL 255
           ++EK+ ++GC+ L  L  + +LRK        ++SLK+L  +G 
Sbjct: 743 SLEKLILSGCSELDKL--SSELRK--------MESLKVLHMDGF 776


>gi|104647025|gb|ABF74136.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 163/370 (44%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  +      + 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTXXX--NS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYFLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                          
Sbjct: 201 LPDTLQNLTSLETLEVSGC----------------------------------------- 219

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
                L     P +S   S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 220 -----LNVNEFPRVS--TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS        S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC   ++  E        
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTR-- 141

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM- 134
             L +S T I   PSSI  +  L  L    C    +  S YL   ++L   + D    + 
Sbjct: 142 -RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPS-YLGHLVSLKSLNLDGCRRLE 199

Query: 135 -LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            LP +L  L SL  L++S C L     P       S++ L +S+ +   +PA I  L  L
Sbjct: 200 NLPDTLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRISETSIEEIPARICNLSQL 255

Query: 193 EKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
             L + + KRL SLP       ++EK++++GC+ L
Sbjct: 256 RSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290


>gi|104646965|gb|ABF74106.1| disease resistance protein [Arabidopsis thaliana]
          Length = 579

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 159/369 (43%), Gaps = 73/369 (19%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+ +P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S TAIR  P SI  +  L+ ++
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIARLTRLQVVA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                              N    S  L   + P LS    L  L LS+  +      + 
Sbjct: 355 IG-----------------NSFYTSEGLLHSLCPPLSRFDDLRALSLSN--MNXXXXXNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 IGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
            SLV++ G        KL  S+C  +D              I + R      + P H + 
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLD----------QATQILIHRNMKLESAKPEHSY- 504

Query: 276 IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP 335
              PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            YP
Sbjct: 505 --FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------YP 552

Query: 336 HPAHVLHCS 344
             +  +HCS
Sbjct: 553 MNSLKIHCS 561



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 29/206 (14%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISG--------------TAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
           L +T+  + SLE L++SG                +R   +SI      + +  R CN   
Sbjct: 201 LPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLRISETSI------EAIPARICN--- 251

Query: 111 SSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
              S      I+  +R + L      S+S L SL KL LS C + E   P     +  L+
Sbjct: 252 --LSQLRSLDISENKRLASLPV----SISELRSLEKLKLSGCSVLESFPPEICQTMSCLR 305

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLK 196
              L +     LP +I  L  LE L+
Sbjct: 306 WFDLDRTTIKELPENIGNLVALEVLQ 331



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 17/225 (7%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC      +PS +G+L SLK+L L 
Sbjct: 135 EISYNTRRLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLR-TLPSYLGHLVSLKSLNLD 193

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
                  LP ++  L +LE L++  C  +   P++  N+E +R++
Sbjct: 194 GCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLRIS 238



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEISYNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 FLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P    N+  L+   +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVSTNIEVLR---I 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS             YL   I
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS-----------CFYLTNCI 105

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            L           +P    L SL  + +S C       P +I   ++ + L+LS      
Sbjct: 106 QLKN---------IPIGITLKSLETVGMSGCS-SLKHFP-EIS--YNTRRLFLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|224092392|ref|XP_002334897.1| predicted protein [Populus trichocarpa]
 gi|222832146|gb|EEE70623.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 145/313 (46%), Gaps = 31/313 (9%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + + E+  SI   + LV L LKGC +L  LP +I ++KSL+T+ + GC + E L E +G 
Sbjct: 265 SSLVEVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGD 324

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           ++ L EL   G       SSI  +K +K LS RGC+  P S S        L+     + 
Sbjct: 325 MKFLTELLADGIKTEQFLSSIGQLKYVKRLSLRGCSPTPPSCS--------LISAGVSIL 376

Query: 132 ALMLPSLSGLGSLTK-LDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASINCL 189
              LP+      L K L LS+CGL + A    D   L SL+ L LS+N F +LP  I  L
Sbjct: 377 KCWLPTSFTEWRLVKHLMLSNCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFL 436

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT-IIDFVDSLK 248
             L  L ++ C+ L S+P LP ++  +  + C SL  +   ++ +K  C  I   +   +
Sbjct: 437 PKLSHLVVQTCEYLVSIPDLPSSLCLLDASSCKSLERVRIPIESKKELCVNIFQSLSLEE 496

Query: 249 LLGKNGLAIS---------------MLREFLEVVSAPSHKFSIVVPGS-----EIPKWFM 288
           + G  GL  S               + +  LE +    H + I          E+P W  
Sbjct: 497 IQGIEGLNNSFWNVSIERRSHSPNKLQKSVLEAMCNRGHGYRINFSLEHDELHEMPDWMS 556

Query: 289 YQNEGSSITVTRP 301
           Y+ EG S++   P
Sbjct: 557 YRGEGCSLSFHIP 569


>gi|297825395|ref|XP_002880580.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326419|gb|EFH56839.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1067

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 144/332 (43%), Gaps = 58/332 (17%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E +  L LD T IK +P +I+ L  LV L LK CK L  LP+ + +LK+L  L L GC +
Sbjct: 691 ESVEFLHLDGTAIKGLPQAIQKLQRLVVLNLKNCKMLACLPNCLGNLKALDKLILSGCSR 750

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            +NL +    ++ L  L   GT  +  PS            F G  G P+SA  +     
Sbjct: 751 LKNLPDVRNSLKHLHTLLFDGTGAKEMPS---------ISCFTGSEG-PASADMF----- 795

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                           L  LGS+T+             P  +  + SL+ L LS N+FV+
Sbjct: 796 ----------------LQTLGSMTEW------------PCAVNRVSSLRHLCLSGNDFVS 827

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI- 240
           L   I  L+NL+ L ++ C +L+S+P LPP ++    +GC SL  +   +     S  I 
Sbjct: 828 LQPDIGKLYNLKWLDVKHCTKLRSVPMLPPKLQYFDAHGCDSLKRVADPIAFSVLSDQIH 887

Query: 241 --IDFVDSLKL--LGKNGLAISMLREFLEVVSAPSHKFSIVV---------PGSEIPKWF 287
               F +  KL    K+ +    LR    V    +     +V         PG E+P WF
Sbjct: 888 ATFSFTNCNKLDQDAKDSIISYTLRRSQLVRDELTQYNGGLVSEALIGTCFPGWEVPAWF 947

Query: 288 MYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
            +Q  GS +    P++ C+ N+  G   C V 
Sbjct: 948 SHQASGSVLKPKLPAHWCD-NKFTGIGLCAVI 978


>gi|358345441|ref|XP_003636786.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355502721|gb|AES83924.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 510

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 183/428 (42%), Gaps = 88/428 (20%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-FENLLETVGQVES 74
           +M  SI +L  LV L LK CK L+ +P NI  L SL+ LNL GC K F+N  +      S
Sbjct: 113 QMGPSIGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKVFKNPRQLRKHDSS 172

Query: 75  LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
                   T      SSI     +   S               P+         D+ +  
Sbjct: 173 ESSSHFQSTT-----SSILKWTRIHFHSL-------------YPYA------HKDIASRF 208

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           L SL  L  L  LD+S CG+ +  +P+ IG L  L+ L L  NNFVT+P S+  L  L  
Sbjct: 209 LHSLLSLSCLNDLDISFCGISQ--LPNAIGRLRWLERLNLGGNNFVTVP-SLRKLSRLAY 265

Query: 195 LKLEDCKRLQSLPQLP-----------PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
           L L+ CK L+SLPQLP            N++K +      LV +    KL +  C     
Sbjct: 266 LNLQHCKLLKSLPQLPFATAIEHDLHINNLDKNKSWKSKGLV-IFNCPKLGERECW---- 320

Query: 244 VDSLKLLGKNGLAISMLREFLEV-VSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPS 302
                    N +  S + + +     + S    IV PGSEIP WF  Q+   S+++    
Sbjct: 321 ---------NSMIFSWMIQLIRANPQSSSDVIQIVTPGSEIPSWFNNQSNSRSLSIALSP 371

Query: 303 YLCN--MNQVVGYAACRVFHVPKHST--------GI--------RRFYRYPHPAHVLHCS 344
            + +   N  +G A C VF V   +T        GI        RR+Y       ++  S
Sbjct: 372 VMHDDTDNNFIGIACCAVFSVSPTTTTYAKTPAIGINFSNRNTRRRWY------GIISVS 425

Query: 345 MDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES----NHFRLSFMDEREKHCPAGSGTGL 400
           ++       SDH+ L+Y P +S++  +K+  E+    ++FR+ F     K      G   
Sbjct: 426 LERYLIEVKSDHMCLIYFPLESFFNILKFIDETLENLDNFRMKFSIMNPK------GLHT 479

Query: 401 KVKRCGFH 408
           KV+ CG+H
Sbjct: 480 KVQSCGYH 487


>gi|307135796|gb|ADN33675.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 1393

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 169/389 (43%), Gaps = 76/389 (19%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T+++ +  S+  L  L+ + L GC NL +LP+ +  LKSL+ L L  C K E+       
Sbjct: 813  TNLRLIHESVGSLYKLIDMDLSGCTNLAKLPTYLR-LKSLRYLGLSECCKLESFPSIAEN 871

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-----------------PPSSAS 114
            +ESL ELD+  TAI+  PSSI  +  L  L+  GC                     S  S
Sbjct: 872  MESLRELDMDFTAIKELPSSIGYLTQLYRLNLTGCTNLISLPNTIYLLRNLDKLLLSGCS 931

Query: 115  CYLPFP-------------INLMRRSSDLGAL----MLPSLSGLGSLTKLDLSDCGLGEG 157
             +  FP               +M  +S   +L    +LP+ S     T LDL  C +   
Sbjct: 932  RFEMFPHKWDPTIQPVCSPSKMMEATS--WSLEYPHLLPNESLCSHFTLLDLQSCNISNA 989

Query: 158  A---IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
                I  D+     L  L LS+N F +LP+ ++   +L  L+L++CK LQ +P LP N++
Sbjct: 990  KFLEILCDVAPF--LSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFLQEIPNLPQNIQ 1047

Query: 215  KVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF 274
             +  +GC SL          +S   I+D +   + L  + ++    REFL          
Sbjct: 1048 NLDASGCKSLA---------RSPDNIMDIISIKQDLAMDEIS----REFL---------- 1084

Query: 275  SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               + G EIP+WF Y+   S++      +  ++ + +      +F V   S+   R  R 
Sbjct: 1085 ---LTGIEIPEWFSYKT-ASNLASASFRHYQDIERTLAVGV--IFKVNGDSS--ERGVRI 1136

Query: 335  PHPAHV---LHCSMDEKFGHRGSDHLWLL 360
                 +   LHCS    F    S+++WLL
Sbjct: 1137 SCNIFICNKLHCSYSRPFLPSKSEYMWLL 1165



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 6/201 (2%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L  L L GC NL +LP     L+SL+ LNL  C K E + +      +LEEL 
Sbjct: 679 SVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLNLSHCKKLEKIPD-FSAASNLEELY 737

Query: 80  I-SGTAIRCPPSSIFLMKNLKTLSFRGC-NGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
           + + T +R    S+F +  L  L+   C N      S Y  + +  +  S       +P 
Sbjct: 738 LFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIPD 797

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLK 196
           LS   +L  L L +C      I   +G+L+ L  + LS   N   LP  +  L +L  L 
Sbjct: 798 LSAASNLQSLCLHECT-NLRLIHESVGSLYKLIDMDLSGCTNLAKLPTYLR-LKSLRYLG 855

Query: 197 LEDCKRLQSLPQLPPNVEKVR 217
           L +C +L+S P +  N+E +R
Sbjct: 856 LSECCKLESFPSIAENMESLR 876



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 81/187 (43%), Gaps = 8/187 (4%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA 84
           S L +L L  C NL  +  ++ SL  L  LNL  C   + L  +  ++ SL+ L++S   
Sbjct: 731 SNLEELYLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCK 790

Query: 85  IRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG 140
                  +    NL++L    C        S  S Y    ++L   S       LP+   
Sbjct: 791 KLEKIPDLSAASNLQSLCLHECTNLRLIHESVGSLYKLIDMDL---SGCTNLAKLPTYLR 847

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           L SL  L LS+C   E + PS   N+ SL+ L +       LP+SI  L  L +L L  C
Sbjct: 848 LKSLRYLGLSECCKLE-SFPSIAENMESLRELDMDFTAIKELPSSIGYLTQLYRLNLTGC 906

Query: 201 KRLQSLP 207
             L SLP
Sbjct: 907 TNLISLP 913


>gi|227438181|gb|ACP30580.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1275

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 155/336 (46%), Gaps = 28/336 (8%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T ++ +P  ++ +  L+ L L GC +L  LP    SL SL+TL L  C    NL E    
Sbjct: 686  TKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEI--SLVSLETLILSNC---SNLKEFRVI 740

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
             ++LE L + GT+++  P  I ++K L  L+ +GC        C            SD  
Sbjct: 741  SQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKELILSDCS 800

Query: 132  ALMLPSLSG--LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLPASINC 188
             L     +G  +  L  L L   GL E      I  + SL+ L LSKN+  ++LP +I+ 
Sbjct: 801  KLQQFPANGESIKVLETLRLDATGLTE------IPKISSLQCLCLSKNDQIISLPDNISQ 854

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSSCTIIDFV- 244
            L+ L+ L L+ CK L S+P+LPPN++    +GC SL T+   L  L   +  C+   F  
Sbjct: 855  LYQLKWLDLKYCKSLTSIPKLPPNLQHFDAHGCCSLKTVSNPLACLTTTQQICSTFIFTS 914

Query: 245  -DSLKLLGKNGLAISMLREFLEV--------VSAPSHKFSIVVPGSEIPKWFMYQNEGSS 295
             + L++  K  ++    R+   +        VS     FS   PGSE+P W  ++  G  
Sbjct: 915  CNKLEMSAKKDISSFAQRKCQLLSDAQNCCNVSDLEPLFSTCFPGSELPSWLGHEAVGCM 974

Query: 296  ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
            + +  P +    N++ G A C V   P     ++ F
Sbjct: 975  LELRMPPHW-RENKLAGLALCAVVSFPNSQVQMKCF 1009



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L LD T +K++PL I++L  L  L +KGC  L   P  ++ LK+LK L L  C K +
Sbjct: 744 LEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQ 803

Query: 64  NLLETVGQVESLEELDISGTAIRCPP 89
                   ++ LE L +  T +   P
Sbjct: 804 QFPANGESIKVLETLRLDATGLTEIP 829


>gi|82542047|gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1146

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 141/302 (46%), Gaps = 29/302 (9%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L+ LV L L+GC +L  LP +I ++KSL+TLN+ GC + E L E +G +ESL +L 
Sbjct: 702 SIGNLTSLVFLNLEGCWSLKILPKSIGNVKSLETLNISGCSQLEKLPEHMGDMESLTKLL 761

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
             G       SSI  +K ++ LS RG N  PSS S      +N  R         LP+  
Sbjct: 762 ADGIENEQFLSSIGQLKYVRRLSLRGYNSAPSS-SLISAGVLNWKR--------WLPTSF 812

Query: 140 GLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
              S+  L LS+  L + A    D   L +L+ L LS N F +LP+ I  L  L  L + 
Sbjct: 813 EWRSVKSLKLSNGSLSDRATNCVDFRGLFALEELDLSGNKFSSLPSGIGFLPKLGFLSVR 872

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSL----KLLGKNG 254
            CK L S+P LP ++  +  + C SL  +   ++ +K       ++D      ++ G  G
Sbjct: 873 ACKYLVSIPDLPSSLRCLGASSCKSLERVRIPIESKKELYIFHIYLDESHSLEEIQGIEG 932

Query: 255 LA---------------ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
           L+                 + +  +E +    H++ I     E+P W  Y  EG S++  
Sbjct: 933 LSNIFWYIGVDSREHSRNKLQKSVVEAMCNGGHRYCISCLPGEMPNWLSYSEEGCSLSFH 992

Query: 300 RP 301
            P
Sbjct: 993 IP 994


>gi|357452805|ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1406

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 196/444 (44%), Gaps = 83/444 (18%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSN---INSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
            SI LL  L  L+L+GC+NLV L  +    ++L SLK L+L GC K E + +  G V +LE
Sbjct: 917  SIGLLKELAFLSLEGCRNLVSLVLDGHPASNLYSLKVLHLSGCSKLEIVSDFRG-VSNLE 975

Query: 77   ELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GA 132
             LDI    ++     SI  +  LK LSFR C    S     +P  IN M     L   G 
Sbjct: 976  YLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLAS-----IPESINSMTSLETLDLCGC 1030

Query: 133  LMLPSLSGLG-----------------------SLTKLDLSDCGLGEGAIPSDIGNLHSL 169
              L SL  LG                       SL  LDLS C L    +P+ IG L  L
Sbjct: 1031 FKLESLPLLGNTSVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSR--VPNAIGELRHL 1088

Query: 170  KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLG 229
            + L L  NN ++LP+S+  L +L  L L  C RLQSLP+L   +      G      + G
Sbjct: 1089 ERLNLEGNNLISLPSSVGGLSSLAYLNLAHCSRLQSLPEL--QLCATSSYGGRYFKMVSG 1146

Query: 230  ALKLRKSSCTIIDFVDSLKLLGKN-GLAISMLREFLEVVSAPSH---KFSIVVPGSEIPK 285
            +   R  S   I     LK+ G++  LA+  L+    +V  P H      IVVP   IP 
Sbjct: 1147 SHNHR--SGLYIFNCPHLKMTGQSLDLAVLWLKN---LVKNPCHFRCGLDIVVPSDTIPL 1201

Query: 286  WFMYQNEGSS-ITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCS 344
            WF +Q  G+S + +T  +   N    +G+A C  F V           + P+P ++   S
Sbjct: 1202 WFDHQFAGNSRVKITDYNKFDNW---LGFAFCVAF-VENCCPSTPASSQLPYPLYLSFES 1257

Query: 345  --MDEKF-----------GHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKH 391
               +E F               ++++WL+Y+ R   +C    HF +   +++F     K 
Sbjct: 1258 EQTEETFDIPIQLDLINVDGSNAEYIWLIYISRP--HC----HFVTTGAQITF-----KA 1306

Query: 392  CPAGSGTGLKVKRCGFHPGYMHEV 415
             P     GL++K  G H  + H++
Sbjct: 1307 HP-----GLELKTWGLHMVFEHDI 1325


>gi|93117597|gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Populus balsamifera]
          Length = 1116

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 125/228 (54%), Gaps = 9/228 (3%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L+  + + E+  SI  L  LV L LKGC  +  LP +I  +KSL++LN+ GC + 
Sbjct: 685 LEKLMLEGCSSLVEVHQSIGHLKSLVLLNLKGCWRIKILPESICDVKSLESLNISGCSQL 744

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPF 119
           E L E +G +ESL EL            SI  +K+++ LS R  N      SS SC  P 
Sbjct: 745 EKLPERMGDIESLTELLADEIQNEQFLFSIGHLKHVRKLSLRVSNFNQDSLSSTSC--PS 802

Query: 120 PINLMRRSSDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSK 176
           PI+    +S L     LP S     S+ +L L++ GL E A      G L SL+ L LS 
Sbjct: 803 PISTWISASVLRVQPFLPTSFIDWRSVKRLKLANYGLSESATNCVYFGGLSSLQELNLSG 862

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           N F++LP+ I+ L  L+ L++++C  L S+ +LP ++EK+  + C S+
Sbjct: 863 NKFLSLPSGISVLTKLQHLRVQNCSNLVSISELPSSLEKLYADSCRSM 910


>gi|227438183|gb|ACP30581.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1232

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 128/252 (50%), Gaps = 33/252 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L++L L  T I+E+P S+  LS LV L L+ CK L ++P  +++L SL  LNL GC + E
Sbjct: 729 LKKLYLGGTSIQELP-SLVHLSELVVLDLENCKQLQKIPLRLSTLTSLAVLNLSGCSELE 787

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----------NGPPSSA 113
           ++ E +    +LEEL ++GTAI+  PSSI  +  L  L  + C          +   S  
Sbjct: 788 DI-EDLNLPRNLEELYLAGTAIQEVPSSITYLSELVILDLQNCKRLRRLPMEISNLKSLV 846

Query: 114 SCYLP---------------FPINLMRRSSDL-GALMLPSLSGLGSLTK-----LDLSDC 152
           +  LP               F  N+ +R   L    +LPS   L  L       + LS C
Sbjct: 847 TLKLPRLFTVETGMSNLISAFNENVCQRQDYLPQPRLLPSSRLLHGLVPRFYALVSLSLC 906

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
                 IP +I +L ++  L LS+N F  +P SI  L  L  L+L  C+ L+SLP+LP +
Sbjct: 907 NASLMHIPEEICSLATVTVLDLSRNGFRKIPESIKQLCKLHSLRLRHCRNLRSLPELPQS 966

Query: 213 VEKVRVNGCASL 224
           ++ + V+GC SL
Sbjct: 967 LKILNVHGCVSL 978


>gi|105922695|gb|ABF81431.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105923067|gb|ABF81454.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 918

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 74/106 (69%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 644 MNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 703

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
           + + + E +G+VESLEE D+SGT+IR  P+SIFL+KNLK LS  GC
Sbjct: 704 ELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGC 749



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 30/199 (15%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     L  + L  CK++  LP+N+  ++SLK   L GC K E   + VG 
Sbjct: 585 TSLSEVHPSLAHHKKLQYVNLVKCKSIRILPNNLE-MESLKVCTLDGCSKLEKFPDIVGN 643

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSS 128
           +  L  L +  T I    SSI  +  L  LS   C      PSS  C             
Sbjct: 644 MNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGC------------- 690

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                       L SL KLDLS C   +  IP ++G + SL+   +S  +   LPASI  
Sbjct: 691 ------------LKSLKKLDLSGCSELK-YIPENLGKVESLEEFDVSGTSIRQLPASIFL 737

Query: 189 LFNLEKLKLEDCKRLQSLP 207
           L NL+ L  + C+R+  LP
Sbjct: 738 LKNLKVLSSDGCERIAKLP 756



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 48/313 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L EL +  + I+++    +    L  + L    NL++ P ++  + +L++L L GC 
Sbjct: 527 MDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTP-DLTGILNLESLILEGCT 585

Query: 61  KFENLLETVGQVESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
               +  ++   + L+ ++ +   +IR  P+++  M++LK  +  GC       S    F
Sbjct: 586 SLSEVHPSLAHHKKLQYVNLVKCKSIRILPNNL-EMESLKVCTLDGC-------SKLEKF 637

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NN 178
           P        D+       +  +  LT L L + G+ +  + S I +L  L  L ++   N
Sbjct: 638 P--------DI-------VGNMNCLTVLCLDETGITK--LCSSIHHLIGLGLLSMNSCKN 680

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLLGALKLRK 235
             ++P+SI CL +L+KL L  C  L+ +P+    VE +    V+G +          +R+
Sbjct: 681 LESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTS----------IRQ 730

Query: 236 SSCTIIDFVDSLKLLGKNGLA-ISMLREFLEVVSAPSHKFSIVVPGSEIPKW----FMYQ 290
              +I   + +LK+L  +G   I+ L  +   +S P   F I +PG+EIP W    F Y 
Sbjct: 731 LPASIF-LLKNLKVLSSDGCERIAKLPSY-SGLSNPRPGFGIAIPGNEIPGWFNHQFFYD 788

Query: 291 NEGSSITVTRPSY 303
            E S I     SY
Sbjct: 789 VEQSKIDDRTKSY 801


>gi|105923139|gb|ABF81459.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1421

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 162/342 (47%), Gaps = 34/342 (9%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
            E+  SIE L+ LV L L+GC NL  LP +I ++KSL+TLN+ GC + E L E +G +ESL
Sbjct: 851  EVHQSIENLTSLVFLNLEGCWNLKILPESIGNVKSLETLNISGCSQLEKLPECMGDMESL 910

Query: 76   EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
             EL   G       +SI  +K+++ LS  G +  P S+S      +N  +         L
Sbjct: 911  TELLADGIENEQFLTSIGQLKHVRRLSLCGYSSAPPSSSLNSAGVLNWKQ--------WL 962

Query: 136  PSLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            P+  G   +  L+LS+ GL +      D   L +L+ L L++N F +LP+ I  L  L +
Sbjct: 963  PTSFGWRLVNHLELSNGGLSDRTTNCVDFSGLSALEVLDLTRNKFSSLPSGIGFLPKLRR 1022

Query: 195  LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSL-KLLGKN 253
            L +  C+ L S+  LP +++ +  + C SL  +   ++ +K     +    SL ++ G  
Sbjct: 1023 LFVLACEYLVSILDLPSSLDCLVASHCKSLKRVRIPIEQKKDLYIELHESHSLEEIQGIE 1082

Query: 254  GLAIS---------------MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
            G + S               + +  +EV+    H + I     E+P W     EG S++ 
Sbjct: 1083 GRSNSFWYICSNQFSHSPKKLQKSVVEVMCNGRHPYRISPIRGEMPNWMSCSGEGCSLSF 1142

Query: 299  TRPS--------YLCNMNQVVGYAACRVFHVPKH-STGIRRF 331
              PS        ++C +  V      R+  + ++ S GI+ F
Sbjct: 1143 HIPSVFQGLVVWFICPLEPVTIEFDSRIIIIIRNKSNGIQLF 1184


>gi|296081026|emb|CBI18530.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 48/303 (15%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++ E+P +   L  L  L L  CKNL  LP ++ +LK LKTLN++GC K   L + +G +
Sbjct: 222 ELAEIPWN---LYSLEYLNLASCKNLKSLPESLCNLKCLKTLNVIGCSK---LPDNLGSL 275

Query: 73  ESLEELDISGTAIRCPPS--SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR--SS 128
           E LE+L  S + +  P S  S+  + +LK L                    NLM+R  S 
Sbjct: 276 ECLEKLYASSSELISPQSDSSLAGLCSLKVLDMHD---------------TNLMQRAISG 320

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           D+G+L         SL +L+LS C L E  IP DI  L+SL+ L LS N F+ +  +I+ 
Sbjct: 321 DIGSLY--------SLEELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFLGVTDAISQ 372

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
           L  L +L L  CK L  +P+LP ++  +  + C  + TL        SS +++ +   L 
Sbjct: 373 LSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKTL--------SSTSVLQWQWQLN 424

Query: 249 LLGKNGLAISMLREFLEVVSAP----SHKFSIVVPGS-EIPKWFMYQ--NEGSSITVTRP 301
                 L      ++  ++S P    S  FS V+PGS E+P+       +E +++ +T+P
Sbjct: 425 CFKSAFLQEIQEMKYRRLLSLPANGVSQGFSTVIPGSGELPEVNQRSSTSENATVNITQP 484

Query: 302 SYL 304
            +L
Sbjct: 485 YHL 487


>gi|356557333|ref|XP_003546971.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1158

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 166/329 (50%), Gaps = 45/329 (13%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  LV+L L  CK L  L S+ + L+SL+ L L GC + +    T    E++++L 
Sbjct: 673 SILSLKKLVRLNLFYCKALTSLRSD-SHLRSLRDLFLGGCSRLKEFSVTS---ENMKDLI 728

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCYLPFPINLMRRSSDLGALML 135
           ++ TAI   PSSI  ++ L+TL+   C    N P   A+      +  +RR    G   L
Sbjct: 729 LTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVAN------LRSLRRLHIYGCTQL 782

Query: 136 PS------LSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
            +      ++GL SL  L L +C  L E  IP +I  L SL+ L L   +  ++ ASI  
Sbjct: 783 DASNLHILVNGLKSLETLKLEECRNLFE--IPDNINLLSSLRELLLKGTDIESVSASIKH 840

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL---------VTLLGALKLRKS--S 237
           L  LEKL L DC+RL SLP+LP +++++    C+SL         V +L A KL  +  +
Sbjct: 841 LSKLEKLDLSDCRRLYSLPELPQSIKELYAINCSSLETVMFTLSAVEMLHAYKLHTTFQN 900

Query: 238 CTIIDFVDSLKLLGKNGLA--ISMLREFLEVVSAPSHKF-----SIVVPGSEIPKWFMYQ 290
           C  +D   SL  +G N       +  +    +   S KF       + PGSE+P+WF+Y+
Sbjct: 901 CVKLD-QHSLSAIGVNAYVNIKKVAYDQFSTIGTNSIKFLGGPVDFIYPGSEVPEWFVYR 959

Query: 291 NEGSSITVTRPSYL-CNMNQVVGYAACRV 318
              +S+TV   S + C  ++++G+  C +
Sbjct: 960 TTQASVTVDLSSSVPC--SKIMGFIFCVI 986


>gi|356514972|ref|XP_003526175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1158

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 186/426 (43%), Gaps = 72/426 (16%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAI 85
            L  L LK CK+LV LP  +  L +LK LNL GC +   +  ++G +  L  L++    ++
Sbjct: 743  LTHLNLKYCKSLVNLPHFVGDL-NLKELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCKSL 801

Query: 86   RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT 145
               PS+I  + +L  LS  GC+             ++ +  S D    +LPS +    + 
Sbjct: 802  ISFPSNILGLSSLTYLSLFGCSN------------LHTIDLSEDSVRCLLPSYTIFSCMR 849

Query: 146  KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
            +LDLS C L +  IP   GNLHSL+ L L  NNF TLP+    L  L  L L+ CKRL+ 
Sbjct: 850  QLDLSFCNLLK--IPDAFGNLHSLEKLCLRGNNFETLPSLEE-LSKLLLLNLQHCKRLKY 906

Query: 206  LPQLPP----------NVEK------VRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
            LP+LP            VE+      + +  C  LV         +  CT   F   +++
Sbjct: 907  LPELPSATDWPMKKWGTVEEDEYGLGLNIFNCPELVD--------RDCCTDKCFFWMMQM 958

Query: 250  LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN--EGSSITVTRPSYLCNM 307
            +    ++++      + ++      S ++PGSEIP WF  Q+   G+ I +    ++   
Sbjct: 959  VQLFTISLN-CHPSGDSMAWRVPLISSIIPGSEIPSWFDEQHLGMGNVINIDISHFMQLD 1017

Query: 308  NQVVGYAACRVFHVPKHSTGIRRF-------YRYPHPAHVLHCSMDEKFGHRGSDHLWLL 360
               +G A   +F V K     RR         +   P+  +     E      SDHLWL 
Sbjct: 1018 KYWIGIALSVIFVVHKE----RRMPPPDMEQRKKERPSLYIPVLFREDLVTDESDHLWLF 1073

Query: 361  YLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAG----SGTGLKVKRCGFHPGYMHEVE 416
            Y PR             +HF +S  DE +  C           ++VK+ G+   Y H+++
Sbjct: 1074 YYPR-------------SHFDVSNFDELKVVCRPRDLDYQDLDVEVKKYGYCWVYEHDLD 1120

Query: 417  EFDETT 422
              + TT
Sbjct: 1121 LSNLTT 1126


>gi|104647007|gb|ABF74127.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 157/369 (42%), Gaps = 73/369 (19%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+ +P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S TAIR  P SI  +  L+ L+
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                              N    S  L   + P LS    L  L LS+  +        
Sbjct: 355 IG-----------------NSFYTSEGLLHSLCPPLSRFDDLRALSLSN--MXXXXXXXX 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
            GNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C
Sbjct: 396 XGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
            SLV++ G        KL  S+C  +D              I + R      + P H + 
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLD----------QATQILIHRNMKLESAKPEHSY- 504

Query: 276 IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP 335
              PGS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            YP
Sbjct: 505 --FPGSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------YP 552

Query: 336 HPAHVLHCS 344
             +  +HCS
Sbjct: 553 MNSLKIHCS 561



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 29/206 (14%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISG--------------TAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
           L +T+  + SLE L++SG                +R   +SI      + +  R CN   
Sbjct: 201 LPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLRISETSI------EAIPARICN--- 251

Query: 111 SSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
              S      I+  +R + L      S+S L SL KL LS C + E   P     +  L+
Sbjct: 252 --LSQLRSLDISENKRLASLPV----SISELRSLEKLKLSGCSVLESFPPEICQTMSCLR 305

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLK 196
              L +     LP +I  L  LE L+
Sbjct: 306 WFDLDRTTIKELPENIGNLVALEVLQ 331



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 17/225 (7%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC      +PS +G+L SLK+L L 
Sbjct: 135 EISYNTRRLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLR-TLPSYLGHLVSLKSLNLD 193

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
                  LP ++  L +LE L++  C  +   P++  N+E +R++
Sbjct: 194 GCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLRIS 238



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEISYNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 FLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P    N+  L+   +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVSTNIEVLR---I 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS             YL   I
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS-----------CFYLTNCI 105

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            L           +P    L SL  + +S C       P +I   ++ + L+LS      
Sbjct: 106 QLKN---------IPIGITLKSLETVGMSGCS-SLKHFP-EIS--YNTRRLFLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|357499823|ref|XP_003620200.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355495215|gb|AES76418.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1437

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 133/299 (44%), Gaps = 53/299 (17%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            DI E   SI  L  LV L+ +GC NL   P  + S K L+ LNL  C   +N  + + +
Sbjct: 692 VDIHE---SIGDLDKLVTLSTEGCPNLKSFPRGLRS-KYLEYLNLRKCSSIDNFPDVLAK 747

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           VE+++ +DI GTAI+  PSSI   K L+ L    C+         LP   ++ +   +L 
Sbjct: 748 VENMKNIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVED-----LPSNTDMFQNIDELN 802

Query: 131 --GALMLPSL----------SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
             G   LP L            L  L+ L L +C L +  +   +     LK L LS NN
Sbjct: 803 VEGCPQLPKLLWKSLENRTTDWLPKLSNLSLKNCNLSDEDLELILKCFLQLKWLILSDNN 862

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
           F+T+P  I  L +L  L +E+CK L+ +  LPP ++ +    C +L      + L ++  
Sbjct: 863 FLTIPVCIKDLSHLLLLNIENCKHLRDISVLPPYLQYIDARMCMALTPHSSEVLLSQA-- 920

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                                   F EV         IVVP ++IP WF + N+G SI+
Sbjct: 921 ------------------------FQEV-----EYIDIVVPRTKIPSWFDHCNKGESIS 950


>gi|104646985|gb|ABF74116.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 160/365 (43%), Gaps = 75/365 (20%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN------- 64
           T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+       
Sbjct: 240 TSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQ 299

Query: 65  -----------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
                            L E +G + +LE L  S T IR  P SI  +  L+ L+     
Sbjct: 300 TMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSF 359

Query: 108 GPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH 167
             P                   L   + P LS    L  L LS+  +      + IGNL 
Sbjct: 360 FTPEG-----------------LLHSLCPPLSRFDDLRALSLSN--MXXXXXXNSIGNLW 400

Query: 168 SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVT 226
           +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++ C SLV+
Sbjct: 401 NLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVS 460

Query: 227 LLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKFSIVVP 279
           + G        KL  S+C  +D    + L+ +N          L++ SA P H +    P
Sbjct: 461 ISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY---FP 506

Query: 280 GSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAH 339
           GS+IP  F +Q  G S+ +  P    + + ++G++AC +  V            YP    
Sbjct: 507 GSDIPTCFNHQVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------YPMNNL 556

Query: 340 VLHCS 344
            +HCS
Sbjct: 557 KIHCS 561



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 107/224 (47%), Gaps = 40/224 (17%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGT-AIRCPP---SSIFLMK----NLKTLSFRGCNGPPSSASCY 116
           L +T+  + SLE L++SG   +   P   +SI +++    +++ +  R CN      S  
Sbjct: 201 LPDTLQNLTSLETLEVSGCLXVXXXPXXSTSIXVLRXXXTSIEEIPARICN-----LSQL 255

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG------------------- 157
               I+  +R + L      S+S L SL KL LS C + E                    
Sbjct: 256 RSLDISENKRLASLPV----SISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDR 311

Query: 158 ----AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
                +P +IGNL +L+ L  S+      P SI  L  L+ L +
Sbjct: 312 TSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAI 355



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P    ++  L+    
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LXVXXXPXXSTSIXVLRXXXT 240

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S      +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 241 S---IEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|296081067|emb|CBI18261.3| unnamed protein product [Vitis vinifera]
          Length = 221

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 23/214 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME LR+L LD T I ++P SIE L GL  L L  CK+L+ +P +I +L SLK LN   C 
Sbjct: 4   MEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCS 63

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E L E +  ++ L++L                      L    C  P  S  C L   
Sbjct: 64  KLEKLPEDLKSLKCLQKL---------------------YLQDLNCQLPSVSGLCSLKV- 101

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +NL   S+ +   +L ++  L SL +L L++C L +G IPS++  L SLK L LS N+F 
Sbjct: 102 LNL-SESNVIDKGILINICHLSSLEELYLNNCNLMDGEIPSEVCQLSSLKELDLSWNHFS 160

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           ++PASI+ L  L+ L L  C+ L  +P+LP  ++
Sbjct: 161 SIPASISQLSKLKALGLSHCRNLLQIPELPSTLQ 194


>gi|255556649|ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223541425|gb|EEF42975.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 79/310 (25%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           L  L +L LK C NL+ L  +I  L+ L  L+L GC   + L   +G +ESLE+L++ G 
Sbjct: 655 LPSLERLKLKDCVNLIDLDESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGC 714

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG 142
           + +   P  +  M++LK L                                         
Sbjct: 715 SKLDQLPEEMRKMQSLKVLYAD-------------------------------------- 736

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
                  +DC L + AIP+D+  L SL++L L  N   ++P SIN L  L+ L L+ C R
Sbjct: 737 -------ADCNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTR 789

Query: 203 LQSLPQLPPNVEKVRVNGCAS-----------------------LVTLLGALKLRKSSCT 239
           LQSLPQLP ++E+++  GC S                       LV + G  KL  +   
Sbjct: 790 LQSLPQLPTSLEELKAEGCTSLERITNLPNLLSTLQVELFGCGQLVEVQGLFKLEPTINM 849

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK----------FSIVVPGSEIPKWFMY 289
            I+ ++ L L   + L  S ++ F  + +                S  + G+E+P WF +
Sbjct: 850 DIEMMNGLGLHNFSTLGSSEMKMFSAIANREMRSPPQVLQECGIVSFFLAGNEVPHWFDH 909

Query: 290 QNEGSSITVT 299
           ++ GSS++ T
Sbjct: 910 KSTGSSLSFT 919


>gi|297811953|ref|XP_002873860.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319697|gb|EFH50119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 157/322 (48%), Gaps = 35/322 (10%)

Query: 17   MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
            +P  +E +  LV L L+GC +L  LP  IN L SL+TL L  C KF+ + + +   E LE
Sbjct: 698  LPQDMENMKCLVFLNLRGCTSLKYLPE-IN-LISLETLILSDCSKFK-VFKVIS--EKLE 752

Query: 77   ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP 136
             + + GTAI+  PS I  ++ L  L+ +GC    +     LP  +  ++    L  L+L 
Sbjct: 753  AIYLDGTAIKELPSDIRNLQRLVLLNMKGCKKLKT-----LPDSLGELKA---LQELILS 804

Query: 137  SLSGLGSLTKLD-----LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLF 190
              S L S  ++      L    L E AI  ++ N+ SL+ L LS+N  +  LP +I+   
Sbjct: 805  GCSKLQSFPEVAKNMNRLEILLLDETAI-KEMPNIFSLRYLCLSRNEKICRLPENISQFS 863

Query: 191  NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS-----SCTIIDFVD 245
             L+ L ++ CK L  LP+LPPN++ +  +GC+SL +++  L    +     S  I    D
Sbjct: 864  RLKWLDMKYCKSLTYLPKLPPNLQCLDAHGCSSLKSIVQPLAHVMATEHIHSTFIFTKCD 923

Query: 246  SLKLLGKNGLAISMLREFLEVVSA---------PSHKFSIVVPGSEIPKWFMYQNEGSSI 296
             L+   K  ++    R+   + SA         P   FS   PG EIP WF +Q  GS +
Sbjct: 924  KLEQAAKEEISSYSQRKCQILPSALKLCNKDLVPEILFSTCFPGGEIPPWFYHQAIGSKV 983

Query: 297  TVTRPSYLCNMNQVVGYAACRV 318
                P +    N++ G A C V
Sbjct: 984  KFESPQHW-KYNKLSGIAFCAV 1004



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  + LD T IKE+P  I  L  LV L +KGCK L  LP ++  LK+L+ L L GC K
Sbjct: 749 EKLEAIYLDGTAIKELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELKALQELILSGCSK 808

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNL 98
            ++  E    +  LE L +  TAI+  P +IF ++ L
Sbjct: 809 LQSFPEVAKNMNRLEILLLDETAIKEMP-NIFSLRYL 844


>gi|296090595|emb|CBI40964.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 177/451 (39%), Gaps = 108/451 (23%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T+++++  S+  LS L+ L ++ C NL  LPS I  L SL+T  L GC K E L E    
Sbjct: 95  TNLRKVHPSLGYLSKLILLNMENCINLEHLPS-IRWLVSLRTFILSGCSKLEKLQEVPQH 153

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +  L +L + GTA          + +    S  G                N    S +L 
Sbjct: 154 MPYLSKLCLDGTA----------ITDFSGWSELG----------------NFQENSGNLD 187

Query: 132 ALMLPSLSGLGSLTKLDLSDCGL--GEGAIPSDIG----------NLHSLKTLYLSKNNF 179
            L    L+   S  +   S   +     A PS              L SL  L LS  + 
Sbjct: 188 CL--SELNSDDSTIRQQHSSSVVLRNHNASPSSAPRRSRFISPHCTLTSLTYLNLSGTSI 245

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT------------- 226
           + LP ++  L  L++L+L +C+RLQ+LP LP ++E +  + C SL               
Sbjct: 246 IHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIECMNASNCTSLELISPQSVFKRFGGF 305

Query: 227 LLG-ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
           L G   KLR     +   V S+      G        +   V+ P   FS V PGSEIP 
Sbjct: 306 LFGNCFKLRNCHSKMEHDVQSVASHAVPGTWRDTYAIWHPNVAIP---FSTVFPGSEIPD 362

Query: 286 WFMYQNEGSSITV-TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCS 344
           WF + ++G  I +   P +  N N  +G+A   V   P+H +           A  ++C 
Sbjct: 363 WFRHHSQGHEINIEVPPDWYINSN-FLGFALSAVM-APQHDSR----------AWCMYCD 410

Query: 345 MD------EKFGHR-----------------GSDHLWLLYLPRQSYYCNVKWHFESNHFR 381
           +D          HR                  SDH+WL Y+P    +   KW    +H +
Sbjct: 411 LDTHDLNSNSNSHRICSFFGSWTYQLQRTPIESDHVWLAYVPSFFSFSREKW----SHIK 466

Query: 382 LSFMDEREKHCPAGSGTGLKVKRCGFHPGYM 412
            SF           S  G  VK CGF P Y+
Sbjct: 467 FSF----------SSSGGCVVKSCGFCPVYI 487


>gi|82542041|gb|ABB82028.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 885

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SIE L+ LV L LKGC  L  LP  I ++KSLKTLN+ GC + E L E +G +ESL
Sbjct: 602 EVHQSIENLTSLVFLNLKGCWRLKNLPERIGNVKSLKTLNISGCSQLEKLPERMGDMESL 661

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
            +L   G       SSI  +K+ + LS  G +  P S+S      +N  R         L
Sbjct: 662 TKLLADGIENEQFLSSIGQLKHCRRLSLHGDSSTPPSSSLISTGVLNWKR--------WL 713

Query: 136 P-SLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           P S     S+  L+LS+ GL + A    D   L +L+ L L+ N F  LP+ I  L  L 
Sbjct: 714 PASFIEWISVKHLELSNSGLSDRATNCVDFSGLSALEKLDLTGNKFSRLPSGIGFLPKLT 773

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            L +E CK L S+P LP ++  +    C SL
Sbjct: 774 YLSVEGCKYLVSIPDLPSSLGHLFACDCKSL 804


>gi|356545161|ref|XP_003541013.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 193/463 (41%), Gaps = 98/463 (21%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            +K++  SI LL  L  L LK C +LV LP     L +L+ L L GC   +++  +VG + 
Sbjct: 674  LKKINPSIGLLRKLAYLNLKDCTSLVELPHFKEDL-NLQHLTLEGCTHLKHINPSVGLLR 732

Query: 74   SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM-------- 124
             LE L +    ++   P+SI  + +LK LS  GC+G  +S     P    L+        
Sbjct: 733  KLEYLILEDCKSLVSLPNSILCLNSLKYLSLYGCSGLYNSGLLKEPRDAELLKQLCIGEA 792

Query: 125  ------------------------RRSSDLGALMLPSLSGL-GSLTKLDLSDCGLGEGAI 159
                                    R  +D    +LPS   +  S+ +LDLS C L +  I
Sbjct: 793  STDSKSISSIVKRWFMWSPRLWYSRAHNDSVGCLLPSAPTIPPSMIQLDLSYCNLVQ--I 850

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
            P  IGNLH L+ L L  N+F  LP  +  L  L  LKL+ CK L+  P+LP     V   
Sbjct: 851  PDAIGNLHCLEILNLEGNSFAALP-DLKGLSKLRYLKLDHCKHLKDFPKLPARTANVE-- 907

Query: 220  GCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAP-SHKFSI-- 276
                   L  AL L   +C         +L+ + G +  +L   +++V A   + F+   
Sbjct: 908  -------LPRALGLSMFNCP--------ELVEREGCSSMVLSWMIQIVQAHYQNNFAWWP 952

Query: 277  -------------VVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAACRVFHVP 322
                         V+PGSEI  WF  Q+      +T  P  L   ++ +G A C VF   
Sbjct: 953  IGMPGFSNPYICSVIPGSEIEGWFTTQHVSKDNLITIDPPPLMQHDKCIGVAYCVVF--A 1010

Query: 323  KHSTGIRRF-----YRYPHPAHV-LHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE 376
             HST +          YP    V +   + E      SDHL L Y P  +Y     W   
Sbjct: 1011 AHSTDLEMVPPETERGYPVMGIVWIPVDVHEDVVTDKSDHLCLFYSP--TYIGIGDW--- 1065

Query: 377  SNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFD 419
                ++  MD++        G  ++VK+ G+    +HE E+ D
Sbjct: 1066 --KLKVKIMDKK--------GFPVEVKKYGYR--RVHE-EDLD 1095


>gi|298204609|emb|CBI23884.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 155/378 (41%), Gaps = 74/378 (19%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LR+L L  T IK++P SI  L  L  L L  C    + P    ++KSL  L LL   
Sbjct: 649  MKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQL-LLRNT 707

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              ++L +++G +ESLE LD+SG+     P     MK+L  L  R      ++A   LP  
Sbjct: 708  AIKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLR------NTAIKDLP-- 759

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                            S+  L SL  LDLSDC   E   P   GN+ SLK L L      
Sbjct: 760  ---------------DSIGDLESLESLDLSDCSKFE-KFPEKGGNMKSLKKLRLRNTAIK 803

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQ--------------------LPPNVEKVR--- 217
             LP SI  L +LE L L DC + +  P+                    LP N+ +++   
Sbjct: 804  DLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKLK 863

Query: 218  ---VNGCASLV------TLLGALKLRKSSCTI----------IDFVDSLKLLGKNGLAIS 258
               ++ C+ L        L    KL  S C +          ++ +D+     K  L+  
Sbjct: 864  RLVLSDCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLEEIDAYHCTSKEDLSGL 923

Query: 259  MLREFLEVVSAPSHKF------SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVG 312
            +    L  + + + +       +++   + IP+W  YQN GS +T   P+        +G
Sbjct: 924  LWLCHLNWLKSTTEELKCWKLVAVIRESNGIPEWIRYQNMGSEVTTELPTNWYEDPHFLG 983

Query: 313  Y-AACRVFHVPKHSTGIR 329
            +  +C   H+P      R
Sbjct: 984  FVVSCVYRHIPTSDFDYR 1001



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 9/180 (5%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LPSN +  K ++    L C   + L      +E L+ +D+S +      S    M NL++
Sbjct: 525 LPSNFDGGKLVELH--LHCSNIKRLWLGNKDLERLKVIDLSYSRKLIQMSEFSRMPNLES 582

Query: 101 LSFRGC----NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE 156
           L   GC    +  PS  +  L     L  RS D    +  S+  L SL  L+LS C   E
Sbjct: 583 LFLNGCVSLIDIHPSVGN--LKKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFE 640

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
              P   GN+ SL+ L+L       LP SI  L +LE L L DC + +  P+   N++ +
Sbjct: 641 -KFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSL 699


>gi|255564938|ref|XP_002523462.1| hypothetical protein RCOM_1044030 [Ricinus communis]
 gi|223537290|gb|EEF38921.1| hypothetical protein RCOM_1044030 [Ricinus communis]
          Length = 468

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 218/492 (44%), Gaps = 98/492 (19%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            ++K++P  +   + L  + + GCKNL+ +PS I  L++L  LNL GC K +N+   V Q
Sbjct: 16  VNLKKLP-DLSTATNLEFIDVDGCKNLLEIPSYIQYLRNLYYLNLCGCEKLQNVPSLV-Q 73

Query: 72  VESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSA--------------SCY 116
           +ESL+ L +S    ++ PP    + + ++ L    C     +A               C 
Sbjct: 74  LESLKFLSLSYCYNLKIPPE---IPEGIQNLRLNRCGLKAIAAFEKLQELLQLNKWYEC- 129

Query: 117 LPFPINLMRRS----SDLGALMLPSLSGLGSLTKLDLSDCG----------------LGE 156
           L FP NL + S     +L +  LPSL  L SLT LDLS C                 LG 
Sbjct: 130 LRFPHNLQKLSLNGCENLDS--LPSLVDLKSLTLLDLSCCSNLTKLPNIPRGVQVLRLGN 187

Query: 157 GAI---PSDIGNLHSLKTLY------LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
             I   PS I  L SL  L       L++   V +P  I  L +L  L L +CKRL+ LP
Sbjct: 188 SGIEKLPSSISCLSSLVELELKEWRNLAETAIVKIPGDIFSLSSLLVLCLNNCKRLRVLP 247

Query: 208 QLPPNVEKVRVNGCASLVTL-----LGALKLRKSSCTIIDFVDSLKLLGK---NGLAISM 259
           +LP  + +++   C SL T         ++         ++ +   L      N +A S+
Sbjct: 248 ELPKQLRQLQALNCTSLETAKKSSSFAVVQEPNKYTYQFNYCNCFNLKQTSHCNIIADSL 307

Query: 260 LREFLEVVSAPSHKFSIVV--PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACR 317
           LR  ++ +   +     +V  PGSE+P+ F  ++EGSSI++  P +  N ++ +G+A   
Sbjct: 308 LR--IKGIDKATEALEYIVGFPGSEVPEQFECKSEGSSISIKLPPHY-NNSKDLGFA--- 361

Query: 318 VFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHR---GSDHLWLLYLPRQSYYCNVKWH 374
            ++  +     + F R       + C ++EK G +    SDHL++ Y      YC+    
Sbjct: 362 FYNGNQKDDNDKDFDR------AICCYLEEK-GEKYILESDHLFIWYTTES--YCD---- 408

Query: 375 FESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLN 434
              N     F      +C   SG  L++K CG H   M  +E+ +   KQ    T   + 
Sbjct: 409 -NGNEVSFKF------NCKDPSGVKLEIKNCGVH---MIWIEQKESDPKQ----TVIAVP 454

Query: 435 EFHHDFVGSNMA 446
                F G+N+A
Sbjct: 455 GSQSRFSGANIA 466


>gi|297791243|ref|XP_002863506.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309341|gb|EFH39765.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 154/344 (44%), Gaps = 67/344 (19%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +KE+P +++ +  LV L L+GC +L+ LP    ++ SLKTL L  C +F+   E +  
Sbjct: 696  TSLKELPEAMQKMKNLVFLNLRGCTSLLSLPKI--TMDSLKTLILSDCSQFQTF-EVIS- 751

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
             E LE L ++GTAI   PS+I  +  L  L+   C    +   C                
Sbjct: 752  -EHLETLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDC---------------- 794

Query: 132  ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI----- 186
                  L  L SL +L LS C   +   P     + SL+ L L   +   +P SI     
Sbjct: 795  ------LGKLKSLQELKLSRCSKLK-PFPDVTAKMESLRVLLLDGTSIAEMPGSIYDLSL 847

Query: 187  -------------------NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
                                 +F+L+ L+L+ CK L SLP LPPN++ +  +GC SL T+
Sbjct: 848  LRRLCLSRNDDIHTLRFDMGQMFHLKWLELKYCKNLISLPILPPNLQCLNAHGCTSLRTV 907

Query: 228  LGALKL-----RKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV----- 277
                 L     +  S  I      L+ + KN + IS +++  +++SA  +    V     
Sbjct: 908  ASPQTLPTPTEQIHSTFIFTNCYELEQVSKNAI-ISYVQKKSKLMSADRYNQDFVFKSLI 966

Query: 278  ---VPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
                PG +IP WF +Q  GS +T+  P +  N  +++G A C V
Sbjct: 967  GTCFPGYDIPAWFNHQALGSVLTLKLPQHW-NAGRLIGIALCVV 1009



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 50/92 (54%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  L L+ T I  +P +I  L  L+ L L  CKNLV LP  +  LKSL+ L L  C K
Sbjct: 752 EHLETLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLGKLKSLQELKLSRCSK 811

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIF 93
            +   +   ++ESL  L + GT+I   P SI+
Sbjct: 812 LKPFPDVTAKMESLRVLLLDGTSIAEMPGSIY 843


>gi|356514965|ref|XP_003526172.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1518

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 163/405 (40%), Gaps = 90/405 (22%)

Query: 4    LRELLLDKTD-IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            LREL L+  + ++++  SI  L+ LV+L LK CK+L  LP+NI  L SL+ L+L GC K 
Sbjct: 999  LRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCKSLESLPNNILRLSSLQYLSLFGCSKL 1058

Query: 63   ENLLETVGQ--VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             N+  +  Q     L++L I     R      F  K L           PS A     F 
Sbjct: 1059 YNIRSSEEQRGAGHLKKLRIGEAPSRSQSIFSFFKKGLPW---------PSVA-----FD 1104

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             +L     D    +LPSL     + +LDLS C L +  IP    N   L+ LYL  NNF 
Sbjct: 1105 KSLEDAHKDSVRCLLPSLPIFPCMRELDLSFCNLLK--IPDAFVNFQCLEELYLMGNNFE 1162

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            TLP S+  L  L  L L+ CKRL+ LP+LP   +    N                   T+
Sbjct: 1163 TLP-SLKELSKLLHLNLQHCKRLKYLPELPSRTDLFWWNW-----------------TTV 1204

Query: 241  IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSI------------------VVPGSE 282
             D+   L      GL I    E  E    P++ FS                   ++PGSE
Sbjct: 1205 DDYEYGL------GLNIFNCPELAERDRCPNNCFSWMMQIAHPDLLPLVPPISSIIPGSE 1258

Query: 283  IPKWFMYQN--EGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF--------- 331
            IP WF  Q+   G+ I + R  ++ +    +G A   +F V K     RR          
Sbjct: 1259 IPSWFEKQHLGMGNVINIGRSHFMQHYKNWIGLALSVIFVVHKE----RRIPPPDMEQPS 1314

Query: 332  --------------YRYPHPAHVLHCSMDEKFGHRGSDHLWLLYL 362
                           +   P+  +     E      SDHLWL Y 
Sbjct: 1315 ILSITCGPSIPPQQRKKERPSPYIPVLFREDLVTDESDHLWLFYF 1359


>gi|42569093|ref|NP_179297.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251486|gb|AEC06580.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1355

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 151/306 (49%), Gaps = 22/306 (7%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L +T IK++P S E L+ LV L L  C+ L  L   + S +S+  ++L GC + +
Sbjct: 668 LRHLNLAETPIKKLPSSFEDLTKLVSLDLNHCERLQHL--QMESFESVVRVDLSGCLELK 725

Query: 64  NLLE-TVGQVESLEELDISGTAIR-CPPSSIFLMKNLKTLSFRGCNGPPSSASCY----L 117
            +L  ++  +  L E       +   PP ++ L+  L+T   R       S S +    +
Sbjct: 726 YILGFSLQDITQLHEDGTDKVMLHGTPPCNVTLI--LETWRTRHVTPMEKSGSKFYLKLM 783

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           PF     R  S L + ++  +  + SL    LS   L +  IP +I NL SLKTL LS N
Sbjct: 784 PFVTTPYR--SKLQSSLVFRMYAMVSLF---LSKAYLLDIHIPQEICNLLSLKTLDLSGN 838

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
           NF  LP SI    NLE L L  CK L+SLP+LP ++E +  +GC  L  +  + +     
Sbjct: 839 NFGKLPESIKQFRNLESLILCHCKNLESLPELPQSLEFLNAHGCVCLKNIHRSFQQFPRH 898

Query: 238 CTIIDFV----DSLKLLGKNGLAISMLREFLE-VVSAPSHKFSIVVPGSEIPKWFMYQNE 292
           CT  +      D ++ + +  +A  ++   L+ ++ AP+  FS  VP    P +  + N 
Sbjct: 899 CTFSNCFEISPDIVREILEARVAQMVIDHTLQKLIEAPAFSFS--VPAFRDPNYIFHLNR 956

Query: 293 GSSITV 298
           GSS+ +
Sbjct: 957 GSSVMI 962



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 102/227 (44%), Gaps = 31/227 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+EL L  T I+E+  SI L S L  L L  CK L  LP    +L SL  L L GC K +
Sbjct: 533 LKELYLSGTGIREVTSSIHL-SSLEVLDLSNCKRLQNLPMGKGNLASLIKLMLSGCSKLQ 591

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           N+ +      +L+EL ++GT+IR  PSSI  +  L       C                 
Sbjct: 592 NIQDLPT---NLKELYLAGTSIREVPSSICHLTQLVVFDAENC----------------- 631

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
            ++  DL       +  L SLT L LS C     +IP    NL  L    L++     LP
Sbjct: 632 -KKLQDLPM----GMGNLISLTMLILSGCS-ELRSIPDLPRNLRHLN---LAETPIKKLP 682

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLP-PNVEKVRVNGCASLVTLLG 229
           +S   L  L  L L  C+RLQ L      +V +V ++GC  L  +LG
Sbjct: 683 SSFEDLTKLVSLDLNHCERLQHLQMESFESVVRVDLSGCLELKYILG 729



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 43/208 (20%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN--LLETVGQVESLEELDISGTAIRC 87
           + L+GC  +   P+    L+ L+ +NL GC + ++  L E  G   +L+EL +SGT IR 
Sbjct: 487 IDLQGCTKIQSFPAT-RHLQHLRVINLSGCVEIKSTQLEEFQGFPRNLKELYLSGTGIRE 545

Query: 88  PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTK 146
             SSI L  +L+ L    C                  +R  +     LP   G L SL K
Sbjct: 546 VTSSIHL-SSLEVLDLSNC------------------KRLQN-----LPMGKGNLASLIK 581

Query: 147 LDLSDCGLGEGAIPSDIGNLH----SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           L LS C        S + N+     +LK LYL+  +   +P+SI  L  L     E+CK+
Sbjct: 582 LMLSGC--------SKLQNIQDLPTNLKELYLAGTSIREVPSSICHLTQLVVFDAENCKK 633

Query: 203 LQSLPQLPPNVEKVRV---NGCASLVTL 227
           LQ LP    N+  + +   +GC+ L ++
Sbjct: 634 LQDLPMGMGNLISLTMLILSGCSELRSI 661


>gi|357474815|ref|XP_003607693.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508748|gb|AES89890.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 982

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 182/442 (41%), Gaps = 99/442 (22%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           +L  + IK++    + L  L+ L L    +L+++P N     +L+ LNL GC     L  
Sbjct: 577 ILKHSCIKQLWKGRKYLPNLITLDLSYSSHLIKVP-NFGEFPNLEHLNLEGCKNLLRLDP 635

Query: 68  TVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           ++G +  +  L++     +   P++IF +  LK L+  GC     S    +P+ +N++  
Sbjct: 636 SIGLLRKIVSLNLKDCKNLVSIPNNIFGLSFLKDLNMCGC-----SEVFNIPWDLNIIES 690

Query: 127 SSDLGALMLPS------LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 L LP+       +    LT +    C  G   +P  IG LH L+ L L  N FV
Sbjct: 691 V----LLFLPNSPFPTPTAQTNWLTSIISLSCFCGLNQLPDAIGCLHWLEELNLGGNKFV 746

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLP-PNVEKVRVNGCASLVTLLGALKLRKSSCT 239
           TLP S+  L  L  L LE CK L+SLPQLP P   K                 LRK +  
Sbjct: 747 TLP-SLRDLSKLVCLNLEHCKLLESLPQLPFPTAIK---------------HNLRKKTT- 789

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV- 298
                     + K GL I    +  E     S         SEI  WF  Q++G SI + 
Sbjct: 790 ----------VKKRGLYIFNCPKLCESEHYCSR--------SEISSWFKNQSKGDSIRID 831

Query: 299 TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRG----- 353
           + P    N N ++G+  C VF +  H           HP+  L     E  G R      
Sbjct: 832 SSPIIHDNNNNIIGFVCCAVFSMAPH-----------HPSRYLPLEFVEIHGKRNCTTSI 880

Query: 354 ------------SDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGL- 400
                       S+H+WL Y P +S++ NV+                  H  A +G GL 
Sbjct: 881 PVILIESLFTVKSNHIWLAYFPLESFW-NVR--------------NETMHVAASTGEGLV 925

Query: 401 -KVKRCGFHPGYMHEVEEFDET 421
            KVK  G+H  Y H+++E + T
Sbjct: 926 IKVKIFGYHWVYKHDLQELNLT 947


>gi|255558310|ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223540674|gb|EEF42237.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1349

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 123/236 (52%), Gaps = 17/236 (7%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L+ L LKGC NL   PS+++ LK L+ L+L GC K + L + +  +++L EL 
Sbjct: 700 SVGDLKKLIHLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSMKNLRELL 759

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL--MLPS 137
           +  TAI   P SIF +K L+ LS +GC       S ++    +L   S D   L  +  S
Sbjct: 760 LDETAIVKLPDSIFHLKELRKLSLKGC-WLLRHVSVHIGKLTSLQELSLDSSGLEEIPDS 818

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           +  L +L  L+L+ C     AIP  I NL SL  L L  ++   LPASI  L +L+ L +
Sbjct: 819 IGSLSNLEILNLARCK-SLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKSLSV 877

Query: 198 EDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTII-DFVDSLKLLGK 252
             C   QSL +LP +     + G ASLV L     L  +S T I D V +L +L K
Sbjct: 878 SHC---QSLSKLPDS-----IGGLASLVELW----LEGTSVTEIPDQVGTLSMLRK 921



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 137/303 (45%), Gaps = 60/303 (19%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L  L+LD + I E+P SIE+L  L  L L  CK L RLP++I +LK L+ L         
Sbjct: 943  LTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPASIGNLKRLQHL--------- 993

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
                       +EE     T++   P  + ++ NL     R     P +           
Sbjct: 994  ----------YMEE-----TSVSELPDEMGMLSNLMIWKMR----KPHT----------- 1023

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNFVTL 182
             R+  D  +++  SLS L  L  LD   CG    GA+P +   L SL+TL  S N+   L
Sbjct: 1024 -RQLQDTASVLPKSLSNLSLLEHLDA--CGWAFFGAVPDEFDKLSSLQTLNFSHNSICCL 1080

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
            P+ +  L  L+ L L DCK+L+SLP LP ++  + V  C +L ++     L+  S   +D
Sbjct: 1081 PSRLRGLSILKNLILADCKQLKSLPLLPSSLVNLIVANCNALESVCDLANLQ--SLQDLD 1138

Query: 243  FVDSLKLLGKNGLAI--SMLREFLEVVSA--PSHK-----------FSIVVPGSEIPKWF 287
              +  K++   GL    S+ R ++    A  P+ K            ++ +PG  +P WF
Sbjct: 1139 LTNCNKIMDIPGLECLKSLRRLYMTGCFACFPAVKKRLAKVALKRLLNLSMPGRVLPNWF 1198

Query: 288  MYQ 290
            + +
Sbjct: 1199 VQE 1201



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 117/246 (47%), Gaps = 35/246 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-----------------------KN 37
           M+ LRELLLD+T I ++P SI  L  L +L+LKGC                         
Sbjct: 752 MKNLRELLLDETAIVKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELSLDSSG 811

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  +P +I SL +L+ LNL  C     + +++  +ESL +L +  ++I   P+SI  + +
Sbjct: 812 LEEIPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCH 871

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-----GALMLPSLSG-LGSLTKLDLSD 151
           LK+LS   C      +   LP  I  +    +L         +P   G L  L KL + +
Sbjct: 872 LKSLSVSHCQ-----SLSKLPDSIGGLASLVELWLEGTSVTEIPDQVGTLSMLRKLHIGN 926

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
           C +    +P  IG + +L TL L  +    LP SI  L +L  L L  CK+LQ LP    
Sbjct: 927 C-MDLRFLPESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPASIG 985

Query: 212 NVEKVR 217
           N+++++
Sbjct: 986 NLKRLQ 991


>gi|359495272|ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 146/318 (45%), Gaps = 54/318 (16%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL +  + IK++   I++L  L  + L   K L++ P + + + +L+ L L GC    
Sbjct: 613 LVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYLIQTP-DFSGITNLERLVLEGCINLP 671

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +  ++G ++ L  L +   T +R  PSS   +K+L+T    GC       S +  FP N
Sbjct: 672 KVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKSLETFILSGC-------SKFEEFPEN 724

Query: 123 LMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                   G L ML  L   G +  LDLS C + +GA  S +G L SL+ L LS NNFVT
Sbjct: 725 F-------GNLEMLKELHADG-IVNLDLSYCNISDGANVSGLGFLVSLEWLNLSGNNFVT 776

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTII 241
           LP +++ L +LE L+L +CKRL++L QLP ++  +    C SL T               
Sbjct: 777 LP-NMSGLSHLETLRLGNCKRLEALSQLPSSIRSLNAKNCTSLGTTELLNL--------- 826

Query: 242 DFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRP 301
                                   +++     F +V+PGS IP W  YQ+  + I    P
Sbjct: 827 ------------------------LLTTKDSTFGVVIPGSRIPDWIRYQSSRNVIEADLP 862

Query: 302 SYLCNMNQVVGYAACRVF 319
             L      +G+A   VF
Sbjct: 863 --LNWSTNCLGFALALVF 878


>gi|15234324|ref|NP_195338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661225|gb|AEE86625.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1179

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 148/342 (43%), Gaps = 70/342 (20%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L  L LD T I ++P  +  L  L+ L LK CK L  +P  +  LK+L+ L L GC K +
Sbjct: 744  LETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKLK 803

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
                 +  ++ L+ L + GTA++  P         K L F                    
Sbjct: 804  TFSVPIETMKCLQILLLDGTALKEMP---------KLLRFNSS----------------- 837

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-L 182
              R  DL  L      G+  L+                      SL+ L LS+NN ++ L
Sbjct: 838  --RVEDLPELR----RGINGLS----------------------SLRRLCLSRNNMISNL 869

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRK-----SS 237
               IN L++L+ L L+ CK L S+P LPPN+E +  +GC  L T+   + L K      S
Sbjct: 870  QIDINQLYHLKWLDLKYCKNLTSIPLLPPNLEILDAHGCEKLKTVASPMALLKLMEQVQS 929

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK--------FSIVVPGSEIPKWFMY 289
              I    ++L+ + KN +     R+  ++ +   +K        F    PGS++P WF Y
Sbjct: 930  KFIFTNCNNLEQVAKNSITSYAQRKS-QLDARRCYKEGGVSEALFIACFPGSDVPSWFNY 988

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
            Q  GS++ +  P + C+ N++   A C V   P     I RF
Sbjct: 989  QTFGSALRLKLPPHWCD-NRLSTIALCAVVTFPDTQDEINRF 1029



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           ++I+E+    +    L  + L   + L  L   +N+ +SL+ LNL GC   E L   + +
Sbjct: 639 SEIEELWEGAKDTQKLKWVDLSHSRKLCNLSGLLNA-ESLQRLNLEGCTSLEELPREMKR 697

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++SL  L++ G T++R  P    +  +LKTL    C    SS   +     NL     D 
Sbjct: 698 MKSLIFLNMRGCTSLRVLPRMNLI--SLKTLILTNC----SSIQKFQVISDNLETLHLDG 751

Query: 131 GAL-MLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
            A+  LP+ +  L  L  L+L DC +  GA+P  +G L +L+ L LS  +   T    I 
Sbjct: 752 TAIGKLPTDMVKLQKLIVLNLKDCKM-LGAVPEFLGKLKALQELVLSGCSKLKTFSVPIE 810

Query: 188 CLFNLEKLKLEDCKRLQSLPQL 209
            +  L+ L L D   L+ +P+L
Sbjct: 811 TMKCLQILLL-DGTALKEMPKL 831


>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1981

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 61/328 (18%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
            E+P SI  ++ L +L L GC +LV LPS++ ++  L+ LNL  C     L  + G   +L
Sbjct: 868  EIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNL 927

Query: 76   EELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDL 130
              LD+SG +++   PSSI  + NL+ L+   C+     P S  + +L F ++L R    L
Sbjct: 928  WRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLAR-CQKL 986

Query: 131  GALMLPSLSGLGSLTKLDLSDC-------------------GLGEGAIPSDIGNLHSLKT 171
             AL  PS   L SL +LDL+DC                   G     +PS I +   L  
Sbjct: 987  EAL--PSNINLKSLERLDLTDCSQFKSFPEISTNIECLYLDGTAVEEVPSSIKSWSRLTV 1044

Query: 172  LYLS--------------------KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            L++S                      +   +   I  +  L  L+L  C++L SLPQLP 
Sbjct: 1045 LHMSYFEKLKEFSHVLDIITWLEFGEDIQEVAPWIKEISRLHGLRLYKCRKLLSLPQLPE 1104

Query: 212  NVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPS 271
            ++  +   GC SL TL  +     +  ++++F    KL   N  A    R+F  ++  P+
Sbjct: 1105 SLSIINAEGCESLETLDCSY---NNPLSLLNFAKCFKL---NQEA----RDF--IIQIPT 1152

Query: 272  HKFSIVVPGSEIPKWFMYQ-NEGSSITV 298
                 V+PG+E+P +F ++   G+S+T+
Sbjct: 1153 SN-DAVLPGAEVPAYFTHRATTGASLTI 1179



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 116/235 (49%), Gaps = 17/235 (7%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL+L     + ++P  +  L  L  L L GC +++ LPS   ++  L++L+L  C   
Sbjct: 689 LEELILKYCVSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKNVTGLQSLDLNECSSL 748

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L  ++G   +L+ LD+    +   P SI    NLK     GC     S+   LPF  N
Sbjct: 749 VELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFTNLKKFILNGC-----SSLVELPFMGN 803

Query: 123 LMR-RSSDLG----ALMLPSLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
               ++ DLG     + LPS  G   +L  LDLS+C      +PS IGN  +L+ L L K
Sbjct: 804 ATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCS-SLVKLPSFIGNATNLEILDLRK 862

Query: 177 -NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTL 227
            ++ V +P SI  + NL +L L  C  L  LP    N+ +++V   + C++LV L
Sbjct: 863 CSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKL 917



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 5/90 (5%)

Query: 4    LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L + +++ ++P SI  L  L  L+L  C+ L  LPSNIN LKSL+ L+L  C +F
Sbjct: 951  LQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNIN-LKSLERLDLTDCSQF 1009

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSI 92
            ++  E    +E L    + GTA+   PSSI
Sbjct: 1010 KSFPEISTNIECLY---LDGTAVEEVPSSI 1036



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L    ++KE+P      + L  L L GC +LV LP +I S  +L+ L+L  C     L  
Sbjct: 1874 LFHSKNLKELP-DFSTATNLQTLILCGCSSLVELPYSIGSANNLQKLHLCRCTSLVELPA 1932

Query: 68   TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG 108
            ++G +  L+ + + G + +   P++I L+ ++K    R   G
Sbjct: 1933 SIGNLHKLQNVTLKGCSKLEVVPTNINLILDVKKYKNRENRG 1974


>gi|297816422|ref|XP_002876094.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321932|gb|EFH52353.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1195

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 150/328 (45%), Gaps = 40/328 (12%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            LV L LKGC +L  LP  IN L SL+ L L  C    NL E     ++LE L + GT+I
Sbjct: 677 SLVFLNLKGCTSLKSLPE-IN-LVSLEILILSNC---SNLKEFRVISQNLETLYLDGTSI 731

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT 145
           +  P +  +++ L  L+ +GC        C             DL AL    LS    L 
Sbjct: 732 KELPLNFNILQRLVILNMKGCTKLKEFPDCL-----------DDLKALKELILSDCSKLQ 780

Query: 146 K--------LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLK 196
           K        + L    L    I ++I  + SL+ L  SKN+ ++ LP +I+ LF L+ L 
Sbjct: 781 KFPAIRESIMVLEILRLDATTI-TEIPMISSLQCLCFSKNDQISSLPDNISQLFQLKWLD 839

Query: 197 LEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS-----SCTIIDFVDSLKLLG 251
           L+ CKRL S+P+LPPN++ +  +GC SL T+   L    +     S  I    + L+   
Sbjct: 840 LKYCKRLTSIPKLPPNLQHLDAHGCCSLKTVSNPLACLTTTQQIYSTFIFSNCNKLERSA 899

Query: 252 KNGLAISMLREFLEVVSAPSH--------KFSIVVPGSEIPKWFMYQNEGSSITVTRPSY 303
           K  ++    R+   ++ A            FSI  PGSE+P WF ++  G  + +  P +
Sbjct: 900 KEEISSFAQRKCQLLLDAQKRCNGSDSEPLFSICFPGSELPSWFCHEAVGPVLELRMPPH 959

Query: 304 LCNMNQVVGYAACRVFHVPKHSTGIRRF 331
             + N++   A C V   PK    I  F
Sbjct: 960 W-HENRLASVALCAVVSFPKSEEQINCF 986



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L LD T IKE+PL+  +L  LV L +KGC  L   P  ++ LK+LK L L  C K +
Sbjct: 721 LETLYLDGTSIKELPLNFNILQRLVILNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQ 780

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
                   +  LE L +  T I    + I ++ +L+ L F
Sbjct: 781 KFPAIRESIMVLEILRLDATTI----TEIPMISSLQCLCF 816


>gi|147833945|emb|CAN61773.1| hypothetical protein VITISV_043565 [Vitis vinifera]
          Length = 695

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 15/207 (7%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA-I 85
           L  L L   +NLV++ SN +++  L+ L L GC     +  ++G +  L  L+++G   +
Sbjct: 365 LTVLDLSHSRNLVKI-SNFSTMPKLEKLILEGCTSLLEIDSSIGDLNKLIFLNLNGCKNL 423

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL--------GALMLPS 137
              PSS   +K L+TL   GC  P        P  +  ++ S +L        G+    S
Sbjct: 424 DSLPSSFCKLKFLETLIVSGCFRPEEX-----PVDLAGLQISGNLPENXTATGGSTSQVS 478

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           L GL SL +LDLSDC L +G IPSD   L SL+ L LS N+F  +P  I  L  L  L+L
Sbjct: 479 LFGLCSLRELDLSDCHLSDGVIPSDFWRLSSLERLNLSGNDFTVIPEGIAQLSKLSVLQL 538

Query: 198 EDCKRLQSLPQLPPNVEKVRVNGCASL 224
             C+RL  +P LP  V++V  + C+SL
Sbjct: 539 GYCQRLLGIPNLPSTVQEVDAHVCSSL 565


>gi|9279731|dbj|BAB01321.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1285

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 155/332 (46%), Gaps = 61/332 (18%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + + E+P SI  ++ L +L L GC +LV LPS++ ++  L+ LNL  C     L  + G 
Sbjct: 823  SSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGH 882

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRR 126
              +L  LD+SG +++   PSSI  + NL+ L+   C+     P S  + +L F ++L R 
Sbjct: 883  ATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLAR- 941

Query: 127  SSDLGALMLPSLSGLGSLTKLDLSDC-------------------GLGEGAIPSDIGNLH 167
               L AL  PS   L SL +LDL+DC                   G     +PS I +  
Sbjct: 942  CQKLEAL--PSNINLKSLERLDLTDCSQFKSFPEISTNIECLYLDGTAVEEVPSSIKSWS 999

Query: 168  SLKTLYLS--------------------KNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
             L  L++S                      +   +   I  +  L  L+L  C++L SLP
Sbjct: 1000 RLTVLHMSYFEKLKEFSHVLDIITWLEFGEDIQEVAPWIKEISRLHGLRLYKCRKLLSLP 1059

Query: 208  QLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVV 267
            QLP ++  +   GC SL TL  +     +  ++++F    KL   N  A    R+F  ++
Sbjct: 1060 QLPESLSIINAEGCESLETLDCSY---NNPLSLLNFAKCFKL---NQEA----RDF--II 1107

Query: 268  SAPSHKFSIVVPGSEIPKWFMYQ-NEGSSITV 298
              P+     V+PG+E+P +F ++   G+S+T+
Sbjct: 1108 QIPTSN-DAVLPGAEVPAYFTHRATTGASLTI 1138



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 8/216 (3%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + + E+P SI     L  L L  C +LV+LPS I +  +L+ L+L  C     +  ++G 
Sbjct: 775 SSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGH 834

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS-SD 129
           V +L  LD+SG +++   PSS+  +  L+ L+   C+      S +     NL R   S 
Sbjct: 835 VTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSF-GHATNLWRLDLSG 893

Query: 130 LGALM-LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
             +L+ LP S+  + +L +L+L +C      +PS IGNLH L TL L++      LP++I
Sbjct: 894 CSSLVELPSSIGNITNLQELNLCNCS-NLVKLPSSIGNLHLLFTLSLARCQKLEALPSNI 952

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           N L +LE+L L DC + +S P++  N+E + ++G A
Sbjct: 953 N-LKSLERLDLTDCSQFKSFPEISTNIECLYLDGTA 987



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 99/216 (45%), Gaps = 40/216 (18%)

Query: 22  ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDIS 81
           EL+     L L  C +LV LPS+I +  +L+ L+ LGC +   L                
Sbjct: 691 ELILKYCSLDLNECSSLVELPSSIGNAINLQNLD-LGCLRLLKL---------------- 733

Query: 82  GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR-RSSDLG----ALMLP 136
                  P SI    NLK     GC     S+   LPF  N    ++ DLG     + LP
Sbjct: 734 -------PLSIVKFTNLKKFILNGC-----SSLVELPFMGNATNLQNLDLGNCSSLVELP 781

Query: 137 SLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEK 194
           S  G   +L  LDLS+C      +PS IGN  +L+ L L K ++ V +P SI  + NL +
Sbjct: 782 SSIGNAINLQNLDLSNCS-SLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWR 840

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTL 227
           L L  C  L  LP    N+ +++V   + C++LV L
Sbjct: 841 LDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKL 876



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 8/101 (7%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGA------IPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           LP LS   +L +L L  C L          +PS IGN  +L+ L L     + LP SI  
Sbjct: 680 LPDLSTATNLEELILKYCSLDLNECSSLVELPSSIGNAINLQNLDLGCLRLLKLPLSIVK 739

Query: 189 LFNLEKLKLEDCKRLQSLPQL--PPNVEKVRVNGCASLVTL 227
             NL+K  L  C  L  LP +    N++ + +  C+SLV L
Sbjct: 740 FTNLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSSLVEL 780


>gi|224131108|ref|XP_002328456.1| predicted protein [Populus trichocarpa]
 gi|222838171|gb|EEE76536.1| predicted protein [Populus trichocarpa]
          Length = 317

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 144/270 (53%), Gaps = 27/270 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ LR L LD   +  +P SI  L  L  L L GC  L  LP NI +LKSLK+LNL G  
Sbjct: 20  LKSLRWLYLDG--LVSLPDSIGALKSLEYLDLSGCSGLASLPDNIGALKSLKSLNLSGWS 77

Query: 59  CFKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
                +L + +G ++SL+ L +SG + +   P +I ++K+L++L+  GC+G    A   L
Sbjct: 78  GLALASLPDNIGALKSLQSLRLSGCSGLASLPDNIGVLKSLESLNLHGCSGL---ALASL 134

Query: 118 PFPINLMRRSSDL------GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           P  I  ++    L      G   LP ++  L SL  LDL  C  G  ++P +IG L SL+
Sbjct: 135 PDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDLHGCS-GLASLPDNIGALKSLE 193

Query: 171 TLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVT 226
           +L LS  +   +LP +I  L +L+ L L  C RL SLP       +++ +R++ C+ L +
Sbjct: 194 SLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLASLPDNIGAFKSLQSLRLSCCSGLAS 253

Query: 227 LLGALKLRKSSCTIIDFVDSLKLLGKNGLA 256
           L   + + KS       ++SL L G +GLA
Sbjct: 254 LPDNIGVLKS-------LESLNLHGCSGLA 276



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 28/227 (12%)

Query: 29  QLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRC 87
            L L GC  L  LP NI +LKSL+ L L G     +L +++G ++SLE LD+SG + +  
Sbjct: 1   MLDLDGCSGLASLPDNIGALKSLRWLYLDG---LVSLPDSIGALKSLEYLDLSGCSGLAS 57

Query: 88  PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG----- 142
            P +I  +K+LK+L+  G +G    A   LP  I  ++    L +L L   SGL      
Sbjct: 58  LPDNIGALKSLKSLNLSGWSGL---ALASLPDNIGALKS---LQSLRLSGCSGLASLPDN 111

Query: 143 -----SLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLS-KNNFVTLPASINCLFNLEKL 195
                SL  L+L  C GL   ++P +IG L SL++L LS  +   +LP +I  L +LE L
Sbjct: 112 IGVLKSLESLNLHGCSGLALASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESL 171

Query: 196 KLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALKLRKS 236
            L  C  L SLP       ++E + ++GC+ L +L   +GALK  KS
Sbjct: 172 DLHGCSGLASLPDNIGALKSLESLDLSGCSGLASLPDNIGALKSLKS 218



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 25/196 (12%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P +I  L  L  L L  C  L  LP NI +LKSL++L+L GC    +L + +G ++
Sbjct: 131 LASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDLHGCSGLASLPDNIGALK 190

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SLE LD+SG + +   P +I  +K+LK+L   GC+   S     LP  I   +       
Sbjct: 191 SLESLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLAS-----LPDNIGAFK------- 238

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                     SL  L LS C  G  ++P +IG L SL++L L   +   +LP +I  L +
Sbjct: 239 ----------SLQSLRLSCCS-GLASLPDNIGVLKSLESLNLHGCSGLASLPDNIGALKS 287

Query: 192 LEKLKLEDCKRLQSLP 207
           L+ L L  C RL SLP
Sbjct: 288 LKSLHLSCCSRLASLP 303



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P +I +L  L  L L GC  L  LP NI +LKSLK+L+L  C +  +L   +G+
Sbjct: 249 SGLASLPDNIGVLKSLESLNLHGCSGLASLPDNIGALKSLKSLHLSCCSRLASLPGRIGE 308

Query: 72  VESL 75
           ++ L
Sbjct: 309 LKPL 312


>gi|255555349|ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223542092|gb|EEF43636.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1109

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 153/331 (46%), Gaps = 66/331 (19%)

Query: 4    LRELLLDKTDIKEMPLSIELL---SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            L EL LD T I ++  +I  +   S LVQL +  C  L  LPS+   LKSL++L+L    
Sbjct: 737  LEELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFYKLKSLESLDL---- 792

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                  +   ++ES              P  +  M NL+ ++ R C              
Sbjct: 793  ------DNWSELESF-------------PEILEPMINLEFITLRNC-------------- 819

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                RR   L      S+  L SL  LD+    + E  IPS I +L  L TL L+   + 
Sbjct: 820  ----RRLKRLPN----SICNLKSLAYLDVEGAAIKE--IPSSIEHLILLTTLKLNDCKDL 869

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
             +LP SI+ L  L+ L+L  CK L+SLP+ P ++ ++    C SL T+  +   +  +  
Sbjct: 870  ESLPCSIHKLPQLQTLELYSCKSLRSLPEFPLSLLRLLAMNCESLETISISFN-KHCNLR 928

Query: 240  IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH-KFSIVVPGSEIPKWFMYQNEGSSITV 298
            I+ F + L+L  K    ++         +A SH  F ++ PGSEIP+WF +Q+ GSS+T+
Sbjct: 929  ILTFANCLRLDPKALGTVAR--------AASSHTDFFLLYPGSEIPRWFSHQSMGSSVTL 980

Query: 299  TRPSYLCNMNQVVGYAACRV--FHVPKHSTG 327
              P    N+ Q    A C V  F +P   +G
Sbjct: 981  QFP---VNLKQFKAIAFCVVFKFKIPPKKSG 1008



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 18/114 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L ++   IKE+P SIE L  L  L L  CK+L  LP +I+ L  L+TL L  C 
Sbjct: 832 LKSLAYLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKLPQLQTLELYSCK 891

Query: 61  KFENLLE--------TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
              +L E             ESLE + IS     C         NL+ L+F  C
Sbjct: 892 SLRSLPEFPLSLLRLLAMNCESLETISISFNK-HC---------NLRILTFANC 935


>gi|225448269|ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 147/339 (43%), Gaps = 51/339 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
            M+ LR+L+L  T IKE+P  I     L  L L  C    +                    
Sbjct: 901  MKSLRQLVLTNTAIKELPTGIANWESLRTLDLSKCSKFEKFPEIQGNMTSLKKLLLNNTA 960

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LP +I  LKSL+ LN+  C KFEN  E  G ++SL+EL +  TAI+  P SI  +++
Sbjct: 961  IKGLPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKSLKELSLKNTAIKDLPDSIGDLES 1020

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSS-------DLGALMLP-SLSGLGSLTKLDL 149
            L  L    C       S +  FP       S       D     LP S+  L SL  LDL
Sbjct: 1021 LWFLDLTNC-------SKFEKFPEKGGNMKSLRVLYLNDTAIKDLPDSIGDLESLEFLDL 1073

Query: 150  SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
            SDC   E   P   GN+ SLK L L       LP SI  L +L  L L DC + +  P+ 
Sbjct: 1074 SDCSKFE-KFPEKGGNMKSLKKLSLKNTAIKDLPYSIRDLESLWFLDLSDCSKFEKFPEK 1132

Query: 210  PPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREF---LEV 266
              N++ +       L     A+K   ++ + + F+++L L G + L   ++      L+ 
Sbjct: 1133 GGNMKSL-----MDLRLKNTAIKDLPNNISGLKFLETLNLGGCSDLWEGLISNQLCNLQK 1187

Query: 267  VSAPS---HKFSIVVPGSE-IPKWFMYQNEGSSITVTRP 301
            ++ P     K + V+P S  I +W  Y   GS +T   P
Sbjct: 1188 INIPELKCWKLNAVIPESSGILEWIRYHILGSEVTAKLP 1226



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 118/250 (47%), Gaps = 42/250 (16%)

Query: 1    MECLRELLLDKTDIKEMPLSI---------------ELLSGLV-QLTLKG------CKNL 38
            M CLRE  L +T  K++P SI                L   LV Q  ++       CK  
Sbjct: 808  MRCLREPYLKETATKDLPTSIGNSRSFWDLYPCGRSNLEKFLVIQQNMRSLRLLYLCKTA 867

Query: 39   VR-LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
            +R LPS+I+ L+S++ L+L  CFKFE   E    ++SL +L ++ TAI+  P+ I   ++
Sbjct: 868  IRELPSSID-LESVEILDLSNCFKFEKFSENGANMKSLRQLVLTNTAIKELPTGIANWES 926

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML---------PSLSGLGSLTKLD 148
            L+TL    C       S +  FP  +    + L  L+L          S+  L SL  L+
Sbjct: 927  LRTLDLSKC-------SKFEKFP-EIQGNMTSLKKLLLNNTAIKGLPDSIGYLKSLEILN 978

Query: 149  LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            +SDC   E   P   GN+ SLK L L       LP SI  L +L  L L +C + +  P+
Sbjct: 979  VSDCSKFEN-FPEKGGNMKSLKELSLKNTAIKDLPDSIGDLESLWFLDLTNCSKFEKFPE 1037

Query: 209  LPPNVEKVRV 218
               N++ +RV
Sbjct: 1038 KGGNMKSLRV 1047



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 99/238 (41%), Gaps = 42/238 (17%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + +MP     LS L +L LKGC +L+ +  +I  LK L TLNL  C K + L  ++  
Sbjct: 725 TKLIQMP-EFSSLSNLERLILKGCVSLIDIHPSIGGLKKLTTLNLKWCLKIKGLPSSISM 783

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP---SSASCYLPFPINLMRRSS 128
           +ESL+ LD+S  +  C  S I    N++      C   P    +A+  LP  I   R   
Sbjct: 784 LESLQLLDLSKCSSFCKFSEI--QGNMR------CLREPYLKETATKDLPTSIGNSRSFW 835

Query: 129 DL-----------------------------GALMLPSLSGLGSLTKLDLSDCGLGEGAI 159
           DL                                 LPS   L S+  LDLS+C   E   
Sbjct: 836 DLYPCGRSNLEKFLVIQQNMRSLRLLYLCKTAIRELPSSIDLESVEILDLSNCFKFE-KF 894

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             +  N+ SL+ L L+      LP  I    +L  L L  C + +  P++  N+  ++
Sbjct: 895 SENGANMKSLRQLVLTNTAIKELPTGIANWESLRTLDLSKCSKFEKFPEIQGNMTSLK 952



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 102/245 (41%), Gaps = 48/245 (19%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L LK C  +  LPS+I+ L+SL+ L+L  C  F    E  G +  L E  
Sbjct: 756 SIGGLKKLTTLNLKWCLKIKGLPSSISMLESLQLLDLSKCSSFCKFSEIQGNMRCLREPY 815

Query: 80  ISGTAIRCPPSSI---------------------FLMKNLKTLSF-----RGCNGPPSSA 113
           +  TA +  P+SI                      + +N+++L             PSS 
Sbjct: 816 LKETATKDLPTSIGNSRSFWDLYPCGRSNLEKFLVIQQNMRSLRLLYLCKTAIRELPSSI 875

Query: 114 SCYLPFPINL-----MRRSSDLGALM---------------LPS-LSGLGSLTKLDLSDC 152
                  ++L       + S+ GA M               LP+ ++   SL  LDLS C
Sbjct: 876 DLESVEILDLSNCFKFEKFSENGANMKSLRQLVLTNTAIKELPTGIANWESLRTLDLSKC 935

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
              E   P   GN+ SLK L L+      LP SI  L +LE L + DC + ++ P+   N
Sbjct: 936 SKFE-KFPEIQGNMTSLKKLLLNNTAIKGLPDSIGYLKSLEILNVSDCSKFENFPEKGGN 994

Query: 213 VEKVR 217
           ++ ++
Sbjct: 995 MKSLK 999


>gi|82542033|gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 10/211 (4%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI   + LV L LKGC +L  LP +I ++KSL+T+ + GC + E L E +G ++ L
Sbjct: 698 EVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFL 757

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
            EL   G       SSI  +K +K LS RGC+  P S S        L+     +    L
Sbjct: 758 TELLADGIKTEQFLSSIGQLKYVKRLSLRGCSPTPPSCS--------LISAGVSILKCWL 809

Query: 136 PSLSGLGSLTK-LDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           P+      L K L LS+CGL + A    D   L SL+ L LS+N F +LP  I  L  L 
Sbjct: 810 PTSFTEWRLVKHLMLSNCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFLPKLS 869

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            L ++ C+ L S+P LP ++  +  + C SL
Sbjct: 870 HLVVQTCEYLVSIPDLPSSLCLLDASSCKSL 900


>gi|105922376|gb|ABF81413.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1152

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 170/404 (42%), Gaps = 115/404 (28%)

Query: 25  SGLVQLTLKGCKNLVRLP-------------SNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           S L QL   GCK+ V+L               ++  + +L++L L GC     +  ++G+
Sbjct: 590 SNLEQLWY-GCKSAVKLKIINLNNSLYLSKTPDLTGIPNLESLILEGCTSLSEVHPSLGR 648

Query: 72  VESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            + L+ ++ ++  +IR  PS++  M++LK  +  GC+                + +  D+
Sbjct: 649 HKKLQYVNLVNCRSIRILPSNL-EMESLKFFTLDGCSK---------------LEKFPDI 692

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
                  +  +  LT L L + G+ +  + S I +L  L+ L ++   N  ++P+SI CL
Sbjct: 693 -------VGNMNQLTVLHLDETGITK--LSSSIHHLIGLEVLSMNNCRNLESIPSSIGCL 743

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
            +L+KL L DC  LQ++PQ    VE +  +G                             
Sbjct: 744 KSLKKLDLSDCSELQNIPQNLGKVESLEFDG----------------------------- 774

Query: 250 LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQ 309
                            +S P   F I +PG+EIP WF +Q++GSSI+V  PS+      
Sbjct: 775 -----------------LSNPRPGFGIAIPGNEIPGWFNHQSKGSSISVQVPSW------ 811

Query: 310 VVGYAACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGHRGSDHLWLLYLP 363
            +G+ AC  F     S  +   ++      YP P   + C      GH  SDH+WL YL 
Sbjct: 812 SMGFVACVAFSANDESPSLFCHFKANERENYPSPM-CISCK-----GHLFSDHIWLFYLS 865

Query: 364 RQSYYCNVKW-HFESNHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
                   +W H   ++  LSF           S  G+KVK CG
Sbjct: 866 FDYLKELQEWQHASFSNIELSFQ---------SSEPGVKVKNCG 900



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L LD+T I ++  SI  L GL  L++  C+NL  +PS+I  LKSLK L+L  C 
Sbjct: 696 MNQLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLDLSDCS 755

Query: 61  KFENLLETVGQVESLE 76
           + +N+ + +G+VESLE
Sbjct: 756 ELQNIPQNLGKVESLE 771


>gi|227438249|gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1309

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 30/315 (9%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L EL LD T I+ +P  I  L  + +L L+ CK+L  LP +I ++ +L +L L G  
Sbjct: 785  LNSLLELELDWTPIETLPAEIGDLHFIQKLGLRNCKSLKALPESIGNMDTLHSLFLTGA- 843

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCY 116
              E L ET G++E+L+ L +     I+  P S   +K+L  L  +  +    P S  +  
Sbjct: 844  NIEKLPETFGKLENLDTLRMDNCKMIKRLPESFGDLKSLHDLYMKETSVVELPESFGNLS 903

Query: 117  LPFPINLMRR---------SSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNL 166
                + ++++         S +   + +P S S L SL ++D    G+  G +P D+G L
Sbjct: 904  NLRVLKILKKPLFRSSPGTSEEPSFVEVPNSFSNLLSLEEIDAKGWGIW-GKVPDDLGKL 962

Query: 167  HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
             SLK L L  N F +LP+S+  L+NL+   L DC+ L+ LP LP  +EK+ +  C +L +
Sbjct: 963  SSLKKLELGNNYFHSLPSSLEGLWNLKLFTLYDCQELKCLPPLPWKLEKLNLANCFALES 1022

Query: 227  LLGALKLRK------SSCTIIDFV------DSLKLLGKNGLAISMLREFLEVVSAPSHKF 274
            +    KL        ++C  +D V       +LK L  +G    +     + +S  S K 
Sbjct: 1023 IADLSKLEILEELNLTNCGKVDDVPGLEHLKALKRLYMSGCNSRLSVAVKKRLSKASLKM 1082

Query: 275  --SIVVPGSEIPKWF 287
              ++ +PG+ IP WF
Sbjct: 1083 MRNLSLPGNRIPDWF 1097



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 108/220 (49%), Gaps = 36/220 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL+EL LD T IKE+P SI  L  L +L+LK C+++  LP                  
Sbjct: 644 MPCLKELFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPM----------------- 686

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                   +G + SLEELD+S T+++  PSSI  +KNL+ LS   C     ++   +P  
Sbjct: 687 -------CIGTLTSLEELDLSSTSLQSLPSSIGDLKNLQKLSLMHC-----ASLSKIPDT 734

Query: 121 INLMRRSSDL-----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++    L         LP  L  L  LT     +C L +  +PS IG L+SL  L L
Sbjct: 735 IKELKSLKKLFIYGSAVEELPLCLGSLPCLTDFSAGECKLLK-HVPSSIGGLNSLLELEL 793

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
                 TLPA I  L  ++KL L +CK L++LP+   N++
Sbjct: 794 DWTPIETLPAEIGDLHFIQKLGLRNCKSLKALPESIGNMD 833


>gi|359486100|ref|XP_002274578.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1535

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 160/403 (39%), Gaps = 90/403 (22%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
            M+ L EL L  T IK++P SI  L  L  L L  C    + P    ++KSLK L L    
Sbjct: 963  MKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKWLYLTNTA 1022

Query: 59   ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                 C KFE   E  G ++SL +LD+  TAI+  P SI  +++
Sbjct: 1023 IKDLPDSIGDLESLLSLHLSDCSKFEKFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLES 1082

Query: 98   LKTLSFRGCNGPPSSASCYLPFP---------INLMRRSSDLGALMLPSLSGLGSLTKLD 148
            L+ L    C       S +  FP           L  R++ +  L   S+  L SL  LD
Sbjct: 1083 LRLLDLSDC-------SKFEKFPEKGGNMKSLKKLFLRNTAIKDLP-DSIGDLESLESLD 1134

Query: 149  LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            LSDC   E   P   GN+ SL  L L+      LP SI  L +L+ L L DC + +  P+
Sbjct: 1135 LSDCSKFE-KFPEKGGNMKSLMDLDLTNTAIKDLPDSIGDLESLKFLVLSDCSKFEKFPE 1193

Query: 209  --------------------LPPNV------EKVRVNGCASLV------TLLGALKLRKS 236
                                LP N+      E++ + GC+ L        L    KL  S
Sbjct: 1194 KGGNMKSLIHLDLKNTAIKDLPTNISRLKNLERLMLGGCSDLWEGLISNQLCNLQKLNIS 1253

Query: 237  SCTI----------IDFVDSLKLLGKNGLAISMLREFLEVVSAPSH-----KFSIVVPGS 281
             C +          +  +D+     K  L+  +    L  + + +      K   V+P S
Sbjct: 1254 QCKMAGQILVLPSSLQEIDAYPCTSKEDLSGLLWLCHLNWLKSTTEELKCWKLGAVIPES 1313

Query: 282  E-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGY-AACRVFHVP 322
              IP+W  YQN GS +T   P+        +G+  +C   H+P
Sbjct: 1314 NGIPEWIRYQNMGSEVTTELPTNWYEDPDFLGFVVSCVYRHIP 1356



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 115/251 (45%), Gaps = 47/251 (18%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
            M+ L +L L  T IK++P SI  L  L  L L  C    +                    
Sbjct: 822  MKSLMKLDLRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTA 881

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LP +I  L+SL  LNL GC KFE   E  G ++SL ELD+  TAI+  P SI  +++
Sbjct: 882  IKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSIGDLES 941

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM-----------LP-SLSGLGSLT 145
            L+ L   GC       S +  FP     +  ++ +L+           LP S+  L SL 
Sbjct: 942  LRLLDLSGC-------SKFEKFP----EKGGNMKSLVELDLKNTAIKDLPDSIGDLESLE 990

Query: 146  KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
             LDLSDC   E   P   GN+ SLK LYL+      LP SI  L +L  L L DC + + 
Sbjct: 991  SLDLSDCSKFE-KFPEKGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLSDCSKFEK 1049

Query: 206  LPQLPPNVEKV 216
             P+   N++ +
Sbjct: 1050 FPEKGGNMKSL 1060



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 105/239 (43%), Gaps = 47/239 (19%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVR-----------------------LPSNINSLKS 50
            +K +P SI  L  L  L L  C   V+                       LP +I  L+S
Sbjct: 788  LKNLPDSIGYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDLES 847

Query: 51   LKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
            L++LNL  C KFE   E  G ++SL  L +  TAI+  P SI  +++L  L+  GC    
Sbjct: 848  LESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTAIKDLPDSIGDLESLMFLNLSGC---- 903

Query: 111  SSASCYLPFPINLMRRSSDLGALM-----------LP-SLSGLGSLTKLDLSDCGLGEGA 158
               S +  FP     +  ++ +LM           LP S+  L SL  LDLS C   E  
Sbjct: 904  ---SKFEKFP----EKGGNMKSLMELDLRYTAIKDLPDSIGDLESLRLLDLSGCSKFE-K 955

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             P   GN+ SL  L L       LP SI  L +LE L L DC + +  P+   N++ ++
Sbjct: 956  FPEKGGNMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLK 1014



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 9/181 (4%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LPSN +  K ++    L C   + L +    +E L+ +D+S +      S    M NL+ 
Sbjct: 698 LPSNFDGEKLVELH--LKCSNIKQLWQGHKDLERLKVIDLSCSRNLIQMSEFSSMPNLER 755

Query: 101 LSFRGC----NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE 156
           L   GC    +  PS  +      ++L  R  D    +  S+  L SL  LDLSDC    
Sbjct: 756 LILEGCVSLIDIHPSVGNMKKLTTLSL--RFCDQLKNLPDSIGYLESLESLDLSDCS-KF 812

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
              P   GN+ SL  L L       LP SI  L +LE L L  C + +  P+   N++ +
Sbjct: 813 VKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSL 872

Query: 217 R 217
           R
Sbjct: 873 R 873


>gi|105923326|gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1368

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 137/312 (43%), Gaps = 53/312 (16%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
            L +L L+GC +LV +   I   KSL +LN+ GC + + L E +G +E   EL   G    
Sbjct: 753  LEKLLLEGCSSLVEIHQCIGHSKSLVSLNISGCSQLQKLPECMGDIECFTELLADGINNE 812

Query: 87   CPPSSIFLMKNLKTLSFRG-----CNGP--PSSASCYLPFPINLMRRSSDLGALMLPSLS 139
               SS+  ++ ++ LS RG      N P  PS  S ++P              L+ P+ +
Sbjct: 813  QFLSSVEHLRCVRKLSLRGHWDWNWNLPYWPSPNSSWIP------------AFLLTPTST 860

Query: 140  GLGSLTKLDLSDCGLGEGAIPS-DIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
                L KL L   GL E A  S D G L SL+ L LS NNF +LP+ I  L  L  L ++
Sbjct: 861  IWRLLGKLKLG-YGLSERATNSVDFGGLSSLEELDLSGNNFFSLPSGIGILSKLRLLTVQ 919

Query: 199  DCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAIS 258
            +C+ L S+P+LP N+E +   GC S+   L                      G  G  I 
Sbjct: 920  ECRNLVSIPELPSNLEHLDAFGCQSMQWAL--------------------CYGGYGYHI- 958

Query: 259  MLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYA-ACR 317
                    +    + FS     + IP WF Y  +G+S++   P     +  VVG A  C 
Sbjct: 959  --------LFNHCYTFSHRDKFTMIPNWFSYSGKGTSLSFHIPPVFQGL--VVGVACQCL 1008

Query: 318  VFHVPKHSTGIR 329
            + H      GI+
Sbjct: 1009 LGHFETAKLGIK 1020


>gi|147792427|emb|CAN68030.1| hypothetical protein VITISV_003124 [Vitis vinifera]
          Length = 1039

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 163/346 (47%), Gaps = 42/346 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LRE     T I E+PLSI+ L+GL +L L+ CK LV    NI SL SLK+L L GC 
Sbjct: 600 MGKLREFNFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCS 659

Query: 61  KFENLLETVGQVESLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGC---NGPP----- 110
           K + L  ++  +++L+ LD+S     +R  P SI  + +L+TL   GC    G P     
Sbjct: 660 KLKGLPSSIXHLKALKNLDLSXCENLVRL-PESICSLXSLETLFLNGCLKFKGFPGVKGH 718

Query: 111 ----------SSASCYLPFPINLMR--------RSSDLGALMLPSLSGLGSLTKLDLSDC 152
                     S+A   +P  I  ++        RSS  G ++   +  L SL +L LS C
Sbjct: 719 MNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSRSSIDGVVL--DICHLLSLKELHLSSC 776

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
            +    IP+DI  L SL+ L L  N+F ++PA I+ L +L  L L  C +LQ +P+LP +
Sbjct: 777 NI--RGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLSHLTSLNLRHCNKLQQVPELPSS 834

Query: 213 VEKVRVNGCAS---LVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA 269
           +  + V+G +        L        +C      DS     +N    S    +      
Sbjct: 835 LRLLDVHGPSDGTSSSPSLLPPLHSLVNCLNSAIQDSENRSRRNWNGASFSDSWY----- 889

Query: 270 PSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYA 314
             +   IV+PGS  IPKW   + +GS I +  P      N  +G+A
Sbjct: 890 SGNGICIVIPGSSGIPKWIKNKRKGSEIEIGLPQNWHLNNDFLGFA 935



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 24/190 (12%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC+ L  LPS+ +  K L++L+  GC K  +  E  G +  L E + SGT+I   P
Sbjct: 558 LTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREFNFSGTSINEVP 617

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
            SI  +  L+ L    C                L+  S ++G+L       L   +KL  
Sbjct: 618 LSIKHLNGLEELLLEDCK--------------KLVAFSENIGSLSSLKSLKLKGCSKLK- 662

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
                    +PS I +L +LK L LS   N V LP SI  L +LE L L  C + +  P 
Sbjct: 663 --------GLPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPG 714

Query: 209 LPPNVEKVRV 218
           +  ++  +RV
Sbjct: 715 VKGHMNNLRV 724


>gi|357521387|ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
 gi|355525004|gb|AET05458.1| NBS-LRR resistance-like protein [Medicago truncatula]
          Length = 1177

 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 158/337 (46%), Gaps = 56/337 (16%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLL---------------- 57
            I E+P S++ L GL +L+L  C+ L  +PS+I SL  L  L+L                 
Sbjct: 710  IMELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKLSKLDLTYCESLETFPSSIFKLK 769

Query: 58   -------GCFKFENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGCNGP 109
                   GC   +N  + +   E+   ++++ TAI+  PSS+ + +  L+TL  + C   
Sbjct: 770  LKKLDLHGCSMLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQTLCLKLC--- 826

Query: 110  PSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHS 168
                              SDL +L   S+  L  L+++D S C  L E  IP++IG+L S
Sbjct: 827  ------------------SDLVSLP-NSVVNLNYLSEIDCSGCCSLTE--IPNNIGSLSS 865

Query: 169  LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
            L+ L L ++N V LP SI  L NL+ L L  CKRL+ +PQLP ++ ++    C S+  ++
Sbjct: 866  LRKLSLQESNVVNLPESIANLSNLKSLDLSFCKRLECIPQLPSSLNQLLAYDCPSVGRMM 925

Query: 229  GALKLRKSSCT-----IIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEI 283
               +L  S+ +     I  F +S +L       I     FL +            PGS +
Sbjct: 926  PNSRLELSAISDNDIFIFHFTNSQELDETVCSNIGA-EAFLRITRGAYRSLFFCFPGSAV 984

Query: 284  PKWFMYQNEGSSITVTRPSYLC-NMNQVVGYAACRVF 319
            P  F Y+  GS +T+ + S  C N  ++ G+A C V 
Sbjct: 985  PGRFPYRCTGSLVTMEKDSVDCPNNYRLFGFALCVVL 1021



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 9   LDKTDIKEMPLSIEL-LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L KT IKE+P S+E  L  L  L LK C +LV LP+++ +L  L  ++  GC     +  
Sbjct: 799 LTKTAIKELPSSLEYNLVALQTLCLKLCSDLVSLPNSVVNLNYLSEIDCSGCCSLTEIPN 858

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            +G + SL +L +  + +   P SI  + NLK+L    C
Sbjct: 859 NIGSLSSLRKLSLQESNVVNLPESIANLSNLKSLDLSFC 897


>gi|15235064|ref|NP_193688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2853080|emb|CAA16930.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268749|emb|CAB78955.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|332658795|gb|AEE84195.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1167

 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 142/315 (45%), Gaps = 33/315 (10%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +K + L  E ++ LV L LKGC  L  LP  IN L+SLKTL L  C    NL E    
Sbjct: 699 TALKTLLLGPENMASLVFLNLKGCTGLESLPK-IN-LRSLKTLILSNC---SNLEEFWVI 753

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            E+L  L + GTAI+  P  +  + +L  L  + C          LP   + ++   +L 
Sbjct: 754 SETLYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDC-----EMLVKLPEEFDKLKVLQELV 808

Query: 132 ALMLPSLSGLGSLTK-LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINCL 189
                 LS L  + K +      L +G   + I ++ SL+ L LS+N  ++ L   I  L
Sbjct: 809 CSGCKRLSSLPDVMKNMQCLQILLLDGTAITKIPHISSLERLCLSRNEKISCLSNDIRLL 868

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIIDFV 244
             L+ L L+ C +L S+P+LP N++ +  NGC SL T+   L       +  S  I    
Sbjct: 869 SQLKWLDLKYCTKLVSIPELPTNLQCLDANGCESLTTVANPLATHLPTEQIHSTFIFTNC 928

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSY 303
           D L    K G               P   FS   PG E+P WF ++  GS + +   P +
Sbjct: 929 DKLDRTAKEGF-------------VPEALFSTCFPGCEVPSWFCHEAVGSVLKLNLLPHW 975

Query: 304 LCNMNQVVGYAACRV 318
             N N+ VG A C V
Sbjct: 976 --NENRFVGIALCAV 988



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  L LD T IK +P  +  L+ LV+L +K C+ LV+LP   + LK L+ L   GC +
Sbjct: 755 ETLYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEFDKLKVLQELVCSGCKR 814

Query: 62  FENLLETVGQVESLEELDISGTAIRCPP 89
             +L + +  ++ L+ L + GTAI   P
Sbjct: 815 LSSLPDVMKNMQCLQILLLDGTAITKIP 842


>gi|399920230|gb|AFP55577.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1035

 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 178/472 (37%), Gaps = 127/472 (26%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV------- 72
            SI LL  L     + CK++  LPS +N ++ L+T ++ GC K + + E VGQ+       
Sbjct: 650  SIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDISGCSKLKIIPEFVGQMKRLSKLY 708

Query: 73   -----------------ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC 115
                             ESL ELD+SG  IR  P S FL +NL              AS 
Sbjct: 709  LGGPAVEKLPSSIEHLSESLVELDLSGIVIREQPYSRFLKQNL-------------IASS 755

Query: 116  YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            +  FP    R+S      +L SL    SL +L L+DC L EG IP+DIG+L SL+ L L 
Sbjct: 756  FGLFP----RKSPHPLIPLLASLKHFSSLKELKLNDCNLCEGEIPNDIGSLSSLRWLELG 811

Query: 176  KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG--CASLVTLLGALKL 233
             NNF                         ++ +   +   VR N    A L  LL  +  
Sbjct: 812  GNNFAL-----------------------TIARTSRSATFVRNNNQILAQLRQLLEYVLK 848

Query: 234  RKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEG 293
            R     ++   D             M+    E           V+PGSEIP+WF  QN  
Sbjct: 849  RWIEFEVLSRCD-------------MMVRMQETHRRTLQPLEFVIPGSEIPEWFNNQNNP 895

Query: 294  SSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFG--- 350
            S++    P                   +   S  I+  +         +  +D  FG   
Sbjct: 896  SAVPEEDP------------------RLDPDSCEIQCIWN--------NYDIDIDFGGIS 929

Query: 351  --HRGSDHLWLLYL--PRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
                 SDHL LL L  P Q            N+  ++F+    +    GS   +KVK+CG
Sbjct: 930  VKQIVSDHLCLLVLLSPFQK---------PENYLEVNFVFTVRR--AVGSNISMKVKKCG 978

Query: 407  FHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCDD 458
                Y H+ EE      Q     S N++ +           A  +GSG  DD
Sbjct: 979  VRALYEHDTEELISKMNQ---SKSSNISLYEEVPWLKAKQEAATSGSGGSDD 1027


>gi|297791257|ref|XP_002863513.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309348|gb|EFH39772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1327

 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 149/350 (42%), Gaps = 76/350 (21%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
            +  L+ L L+GC +L  LP     L SLKTL L GC    N+ E     E LEEL + GT
Sbjct: 710  MGSLLFLNLRGCTSLESLPKI--KLNSLKTLILSGC---SNVDEFNLISEKLEELYLDGT 764

Query: 84   AIRCPPSSI---------------------FLMKNLKTLS---FRGCNGPPSSASCYLPF 119
            AI+  PS I                       ++NLK L      GC       S  + F
Sbjct: 765  AIKGLPSDIGNLQRLVLLKLKDCKKLLSLPDTIRNLKALEKLILSGC-------SSLVSF 817

Query: 120  PINLMRRSSDLGALMLPSLS----------------GLGSLTKLDLSDCGLGEGAIPSDI 163
            P  + +    L  L+L   +                   S T  DL +   G       I
Sbjct: 818  P-EVKQNLKHLKTLLLDGTAIKDVHDVVHRLSINQGQFSSFTHYDLCEWRHG-------I 869

Query: 164  GNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCAS 223
              L S++ L LS+N+F +LP SI  L+NL+ L L+ CK+L SLP LPPN+  +  +GC S
Sbjct: 870  NGLSSVQRLCLSRNDFTSLPESIMYLYNLKWLDLKYCKQLTSLPMLPPNLHWLDADGCIS 929

Query: 224  L------VTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK---- 273
            L      ++LL A   +  S  I      L  + KN +   + R+   +  A  HK    
Sbjct: 930  LKNIENSLSLLLAATEQLHSTFIFSNCKKLDQVAKNDIVSYVRRKIQLMSDALVHKNKGS 989

Query: 274  -----FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
                   I  PG ++P WF +++ GS +    P +  N + + G A C V
Sbjct: 990  ILDVLIKICYPGWQLPVWFDHRSVGSELKQNLPRHW-NEDGLTGIALCVV 1038


>gi|449526134|ref|XP_004170069.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
            [Cucumis sativus]
          Length = 1195

 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 162/368 (44%), Gaps = 54/368 (14%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+  L  L+ L L  C  L  LPS +  LKSL +L+L  C+K E L E    ++SL E++
Sbjct: 822  SVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFDENMKSLREMN 880

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL------ 133
            + GTAIR  P+SI  +  L+ L    C    S     LP  I+L++   +L         
Sbjct: 881  LKGTAIRKLPTSIRYLIGLENLILSYCTNLIS-----LPSEIHLLKSLKELDLRECSRLD 935

Query: 134  MLPSLSGL--------GSLTKLDLSDCGLGEGAIPSDIGNL-HSLKTLYLSKNNFVTLPA 184
            MLPS S L         +LT LDL +C +       ++ N   +LK L LS N F  LP 
Sbjct: 936  MLPSGSSLNFPQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFCCLP- 994

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
            S+    +L  L+L +CK L+++ ++P  ++++  +GC  LV                   
Sbjct: 995  SLKNFTSLRLLELRNCKFLRNIVKIPHCLKRMDASGCELLV------------------- 1035

Query: 245  DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYL 304
                 +  + +A  M R   + +   + K  ++V  SEIPK+   Q   SSI+    S+ 
Sbjct: 1036 -----ISPDYIADMMFRN--QDLKLRNFKRELIVTYSEIPKFCNNQTTESSISF---SFQ 1085

Query: 305  CNMNQVV-GYAACRVFHVPKHSTGIRRF--YRYPHPAHVLHCSMDEKFGHRGSDHLWLLY 361
             N + ++     C VF V   S     F  ++       L     E +    S+H+ LL 
Sbjct: 1086 HNSDMIIPALVVCVVFKVDADSFVAEAFIHFQVLFDGQKLMMPTMESWCGSKSEHMLLLR 1145

Query: 362  LPRQSYYC 369
             P     C
Sbjct: 1146 TPPSQLIC 1153



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 10/190 (5%)

Query: 23  LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV--GQVESLEELDI 80
            L  LV L L+GCK L RLP++    +SLK LNL  C   +NL E        +LE  D+
Sbjct: 754 FLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYC---QNLKEITDFSIASNLEIFDL 810

Query: 81  SGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
            G  ++R    S+  +  L  L    C+      SC     ++ +  ++      LP   
Sbjct: 811 RGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRLKSLDSLSLTNCYKIEQLPEFD 870

Query: 140 -GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKL 197
             + SL +++L   G     +P+ I  L  L+ L LS   N ++LP+ I+ L +L++L L
Sbjct: 871 ENMKSLREMNLK--GTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDL 928

Query: 198 EDCKRLQSLP 207
            +C RL  LP
Sbjct: 929 RECSRLDMLP 938



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 119/282 (42%), Gaps = 57/282 (20%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE---------NLLE--- 67
           S+  LS LV L L+GC+NL +LPS+   LKSL+ LNL GC K +         NL E   
Sbjct: 678 SVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSASSNLKELHL 737

Query: 68  ------------TVGQ-VESLEELDISGTAI-RCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
                        VG+ ++ L  LD+ G  I    P+S    ++LK L+   C       
Sbjct: 738 RECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEIT 797

Query: 114 SCYLP-----------FPINLMRRS----SDLGALM---------LPSLSGLGSLTKLDL 149
              +            F +  + +S      L AL          LPS   L SL  L L
Sbjct: 798 DFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRLKSLDSLSL 857

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-- 207
           ++C   E  +P    N+ SL+ + L       LP SI  L  LE L L  C  L SLP  
Sbjct: 858 TNCYKIE-QLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSE 916

Query: 208 -QLPPNVEKVRVNGCASLVTLLGALKL---RKSSCTIIDFVD 245
             L  +++++ +  C+ L  L     L   ++S C+ +  +D
Sbjct: 917 IHLLKSLKELDLRECSRLDMLPSGSSLNFPQRSLCSNLTILD 958



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 102/243 (41%), Gaps = 34/243 (13%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            L +L L  CK L  +  ++ SL  L TL+L GC   E L  +   ++SLE L++SG   
Sbjct: 660 NLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIK 719

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT 145
                 +    NLK L  R C            + + ++  S+ +G         L  L 
Sbjct: 720 LKEIPDLSASSNLKELHLREC------------YHLRIIHDSA-VGRF-------LDKLV 759

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
            LDL  C + E  +P+      SLK L LS    +      +   NLE   L  C  L++
Sbjct: 760 ILDLEGCKILE-RLPTSHLKFESLKVLNLSYCQNLKEITDFSIASNLEIFDLRGCFSLRT 818

Query: 206 LPQLPPNVEK---VRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE 262
           + +   ++++   ++++ C  L  L   L+L+         +DSL L   N   I  L E
Sbjct: 819 IHKSVGSLDQLIALKLDFCHQLEELPSCLRLKS--------LDSLSL--TNCYKIEQLPE 868

Query: 263 FLE 265
           F E
Sbjct: 869 FDE 871


>gi|356514859|ref|XP_003526120.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1146

 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 201/459 (43%), Gaps = 53/459 (11%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            +KE+ LSI L   L  L LK CK L+ LP     L  L+ L L GC K  ++  ++G ++
Sbjct: 667  LKEIGLSIVLSRRLSYLDLKDCKCLINLPRFGEDL-ILQILVLEGCQKLRHIDSSIGLLK 725

Query: 74   SLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL-------------PF 119
             L  LD+     +   P+SI  + +L+ L+  GC+   +    Y                
Sbjct: 726  KLRRLDLKNCKNLVSLPNSILGLNSLECLNLSGCSKLYNIQLLYELRDAEHLKKIDIDGA 785

Query: 120  PINLMRRSS-------DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            PI+    SS        +G LM PS      + +LDLS C L +  IP  IG +  L+ L
Sbjct: 786  PIHFQSTSSYSRQHKKSVGCLM-PSSPIFPCMCELDLSFCNLVQ--IPDAIGIICCLEKL 842

Query: 173  YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-KVRVNGCASLVTLLGAL 231
             LS NNFVTLP ++  L  L  LKL+ CK+L+SLP+LP  ++       C  L+ +    
Sbjct: 843  DLSGNNFVTLP-NLKKLSKLFSLKLQHCKKLKSLPELPSRIDLPTDAFDCFRLM-IPSYF 900

Query: 232  KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEV-VSAP-SHKFSIVVPGSEIPKWFMY 289
            K  K    I +  + +       +A+S +    +V    P + +   V  GSEIP+WF  
Sbjct: 901  KNEKIGLYIFNCPELVDRDRCTDMALSWMILISQVQFKLPFNRRIQSVTTGSEIPRWFNN 960

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYP-HPAHV-------L 341
            Q+EG+ +++     + + N  +G A C +F VP  +     F      P H         
Sbjct: 961  QHEGNCVSLDASPVMHDHNW-IGVAFCLMFVVPHETLSAMGFSDSDCPPWHFFGDIPVDF 1019

Query: 342  HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHF--RLSFMDEREKHCPAGSG-- 397
            +  +D +     SDH+WL ++ R  +         S  F  +L ++      C    G  
Sbjct: 1020 YGDLDLELVLDKSDHMWLFFVSRTQF---------SRQFPLKLKYLGRLVLKCDKRMGWS 1070

Query: 398  -TGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNE 435
             +  +VK+ G+   Y  + EE      +  +F     NE
Sbjct: 1071 ESYAEVKKYGYRWVYKEDKEEPSNPLARKRKFGEIEENE 1109


>gi|297819854|ref|XP_002877810.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323648|gb|EFH54069.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1251

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 124/270 (45%), Gaps = 55/270 (20%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            LR+L L  T I+E+P S+  LS LV L L+ CK L +LP  I +L SL  LNL GC + E
Sbjct: 737  LRKLYLGGTAIQELP-SLMHLSELVVLDLENCKRLEKLPMGIGNLSSLAVLNLSGCSELE 795

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---------------- 107
            ++    G   +LEEL ++GTAI+  PSSI  +  L  L  + C                 
Sbjct: 796  DI---QGIPRNLEELYLAGTAIQEVPSSIKHLSELVVLDLQNCKRLRHLPMEIGNLKSLV 852

Query: 108  ----GPPSSASC---------------------YLPFPI--NLMRRSSDLGALMLPSLSG 140
                  PS  S                      YL F +  N  +R   L    LPS S 
Sbjct: 853  TLKLTDPSGMSIREVSTSIIQNGISEINISNLNYLLFTVNENADQRREHLPQPRLPSSSL 912

Query: 141  LG------SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
             G      +L  L L +  L    IP +I +L S+  L L +N F  +P SI  L  L  
Sbjct: 913  HGLVPRFYALVSLSLFNASLMH--IPEEICSLPSVVLLDLGRNGFSKIPESIKQLSKLHS 970

Query: 195  LKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            L+L  C+ L SLP LP +++ + V+GC SL
Sbjct: 971  LRLRHCRNLISLPVLPQSLKLLNVHGCVSL 1000



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 30/205 (14%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           + L+GC  L R  +     + L+ +NL GC K ++  E    +E   EL +  T +R  P
Sbjct: 620 IDLQGCARLQRFIAT-GHFQHLRVINLSGCIKIKSFPEVPPNIE---ELYLKQTGLRSIP 675

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
           + IF               P  ++  Y       + R     +  L  +  L  L  LDL
Sbjct: 676 TVIF--------------SPQDNSFIYDHQDHKFLNREVSSESQSLSIMVYLKYLKVLDL 721

Query: 150 SDC-GLGE-GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           S C GL +   IP +      L+ LYL       LP S+  L  L  L LE+CKRL+ LP
Sbjct: 722 SHCLGLEDIHGIPKN------LRKLYLGGTAIQELP-SLMHLSELVVLDLENCKRLEKLP 774

Query: 208 QLPPNVEKVRV---NGCASLVTLLG 229
               N+  + V   +GC+ L  + G
Sbjct: 775 MGIGNLSSLAVLNLSGCSELEDIQG 799


>gi|449464636|ref|XP_004150035.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1195

 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 162/368 (44%), Gaps = 54/368 (14%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+  L  L+ L L  C  L  LPS +  LKSL +L+L  C+K E L E    ++SL E++
Sbjct: 822  SVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFDENMKSLREMN 880

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL------ 133
            + GTAIR  P+SI  +  L+ L    C    S     LP  I+L++   +L         
Sbjct: 881  LKGTAIRKLPTSIRYLIGLENLILSYCTNLIS-----LPSEIHLLKSLKELDLRECSRLD 935

Query: 134  MLPSLSGL--------GSLTKLDLSDCGLGEGAIPSDIGNL-HSLKTLYLSKNNFVTLPA 184
            MLPS S L         +LT LDL +C +       ++ N   +LK L LS N F  LP 
Sbjct: 936  MLPSGSSLNFPQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFCCLP- 994

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
            S+    +L  L+L +CK L+++ ++P  ++++  +GC  LV                   
Sbjct: 995  SLKNFTSLRLLELRNCKFLRNIVKIPHCLKRMDASGCELLV------------------- 1035

Query: 245  DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYL 304
                 +  + +A  M R   + +   + K  ++V  SEIPK+   Q   SSI+    S+ 
Sbjct: 1036 -----ISPDYIADMMFRN--QDLKLRNFKRELIVTYSEIPKFCNNQTTESSISF---SFQ 1085

Query: 305  CNMNQVV-GYAACRVFHVPKHSTGIRRF--YRYPHPAHVLHCSMDEKFGHRGSDHLWLLY 361
             N + ++     C VF V   S     F  ++       L     E +    S+H+ LL 
Sbjct: 1086 HNSDMIIPALVVCVVFKVDADSFVAEAFIHFQVLFDGQKLMMPTMESWCGSKSEHMLLLR 1145

Query: 362  LPRQSYYC 369
             P     C
Sbjct: 1146 TPPSQLIC 1153



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 10/190 (5%)

Query: 23  LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV--GQVESLEELDI 80
            L  LV L L+GCK L RLP++    +SLK LNL  C   +NL E        +LE  D+
Sbjct: 754 FLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYC---QNLKEITDFSIASNLEIFDL 810

Query: 81  SGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
            G  ++R    S+  +  L  L    C+      SC     ++ +  ++      LP   
Sbjct: 811 RGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRLKSLDSLSLTNCYKIEQLPEFD 870

Query: 140 -GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKL 197
             + SL +++L   G     +P+ I  L  L+ L LS   N ++LP+ I+ L +L++L L
Sbjct: 871 ENMKSLREMNLK--GTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDL 928

Query: 198 EDCKRLQSLP 207
            +C RL  LP
Sbjct: 929 RECSRLDMLP 938



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 119/282 (42%), Gaps = 57/282 (20%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE---------NLLE--- 67
           S+  LS LV L L+GC+NL +LPS+   LKSL+ LNL GC K +         NL E   
Sbjct: 678 SVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSASSNLKELHL 737

Query: 68  ------------TVGQ-VESLEELDISGTAI-RCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
                        VG+ ++ L  LD+ G  I    P+S    ++LK L+   C       
Sbjct: 738 RECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEIT 797

Query: 114 SCYLP-----------FPINLMRRS----SDLGALM---------LPSLSGLGSLTKLDL 149
              +            F +  + +S      L AL          LPS   L SL  L L
Sbjct: 798 DFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRLKSLDSLSL 857

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-- 207
           ++C   E  +P    N+ SL+ + L       LP SI  L  LE L L  C  L SLP  
Sbjct: 858 TNCYKIE-QLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSE 916

Query: 208 -QLPPNVEKVRVNGCASLVTLLGALKL---RKSSCTIIDFVD 245
             L  +++++ +  C+ L  L     L   ++S C+ +  +D
Sbjct: 917 IHLLKSLKELDLRECSRLDMLPSGSSLNFPQRSLCSNLTILD 958



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 102/243 (41%), Gaps = 34/243 (13%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            L +L L  CK L  +  ++ SL  L TL+L GC   E L  +   ++SLE L++SG   
Sbjct: 660 NLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIK 719

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT 145
                 +    NLK L  R C            + + ++  S+ +G         L  L 
Sbjct: 720 LKEIPDLSASSNLKELHLREC------------YHLRIIHDSA-VGRF-------LDKLV 759

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
            LDL  C + E  +P+      SLK L LS    +      +   NLE   L  C  L++
Sbjct: 760 ILDLEGCKILE-RLPTSHLKFESLKVLNLSYCQNLKEITDFSIASNLEIFDLRGCFSLRT 818

Query: 206 LPQLPPNVEK---VRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE 262
           + +   ++++   ++++ C  L  L   L+L+         +DSL L   N   I  L E
Sbjct: 819 IHKSVGSLDQLIALKLDFCHQLEELPSCLRLKS--------LDSLSL--TNCYKIEQLPE 868

Query: 263 FLE 265
           F E
Sbjct: 869 FDE 871


>gi|359496032|ref|XP_003635136.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1050

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 178/471 (37%), Gaps = 148/471 (31%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE-------- 63
            T+++++  S+  LS L+ L ++ C NL  LPS I  L SL+T  L GC K E        
Sbjct: 627  TNLRKVHPSLGYLSKLILLNMENCINLEHLPS-IRWLVSLRTFILSGCSKLEKLQEVPQH 685

Query: 64   ------------------------NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
                                    N  E  G ++ L EL+   + IR   SS  +++N  
Sbjct: 686  MPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLSELNSDDSTIRQQHSSSVVLRNH- 744

Query: 100  TLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAI 159
                   N  PSSA           RRS      + P  +                    
Sbjct: 745  -------NASPSSAP----------RRSR----FISPHCT-------------------- 763

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
                  L SL  L LS  + + LP ++  L  L++L+L +C+RLQ+LP LP ++E +  +
Sbjct: 764  ------LTSLTYLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIECMNAS 817

Query: 220  GCASLVT-------------LLG-ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLE 265
             C SL               L G   KLR     +   V S+      G        +  
Sbjct: 818  NCTSLELISPQSVFKRFGGFLFGNCFKLRNCHSKMEHDVQSVASHAVPGTWRDTYAIWHP 877

Query: 266  VVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV-TRPSYLCNMNQVVGYAACRVFHVPKH 324
             V+ P   FS V PGSEIP WF + ++G  I +   P +  N N  +G+A   V   P+H
Sbjct: 878  NVAIP---FSTVFPGSEIPDWFRHHSQGHEINIEVPPDWYINSN-FLGFALSAVM-APQH 932

Query: 325  STGIRRFYRYPHPAHVLHCSMD------EKFGHR-----------------GSDHLWLLY 361
             +           A  ++C +D          HR                  SDH+WL Y
Sbjct: 933  DS----------RAWCMYCDLDTHDLNSNSNSHRICSFFGSWTYQLQRTPIESDHVWLAY 982

Query: 362  LPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYM 412
            +P    +   KW    +H + SF           S  G  VK CGF P Y+
Sbjct: 983  VPSFFSFSREKW----SHIKFSF----------SSSGGCVVKSCGFCPVYI 1019


>gi|82542043|gb|ABB82029.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1147

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 151/335 (45%), Gaps = 28/335 (8%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI  L+ L+ L L+GC  L  LP +I ++KSLK LN+ GC + E L E +G +ESL
Sbjct: 662 EVHQSIGNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGDMESL 721

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD------ 129
            EL   G   +   SSI  +K ++ LS RG N    S S   P   +     S       
Sbjct: 722 IELLADGIENKQFLSSIGQLKYVRRLSLRGYNFSQDSPSWLSPSSTSWPPSISSFISASV 781

Query: 130 --LGALMLPSLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASI 186
             L  L+  +     S+  L+LS  GL +      D     SL+ L LS N F +LP+ I
Sbjct: 782 LCLKRLLPTTFIDWRSVKSLELSYVGLSDRVTNCVDFRGFSSLEELDLSGNKFSSLPSGI 841

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
             L  LE + +++CK L S+  LP N+  +   GC SL  +   ++ +K     +    S
Sbjct: 842 GFLAKLEMMDVQECKYLVSIRDLPSNLVYLFAGGCKSLERVRIPIESKKELYINLHESHS 901

Query: 247 LK----LLGKNGLAISML------------REFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
           L+    + G++ +  ++L            +  +E      +++ I     ++P W  Y 
Sbjct: 902 LEEIQGIEGQSNIFWNILVDDCIPSPNKLQKSVVEAFCNGCYRYFIYCLPGKMPNWMSYS 961

Query: 291 NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHS 325
            EG  ++   P     +   V +  C +  V +HS
Sbjct: 962 GEGCPLSFHIPPVFQGL---VVWFVCSLEKVHRHS 993


>gi|297791253|ref|XP_002863511.1| hypothetical protein ARALYDRAFT_916989 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309346|gb|EFH39770.1| hypothetical protein ARALYDRAFT_916989 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 464

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 150/312 (48%), Gaps = 28/312 (8%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV--ESLEELDIS 81
           +  L+ L L+GC  LV LP    SL SLK L L GC KF+       QV  E+LE L ++
Sbjct: 1   MKNLILLNLRGCTGLVSLPKI--SLCSLKILILSGCSKFQKF-----QVISENLETLYLN 53

Query: 82  GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSL-SG 140
           GTAI   P S+  ++ L  L  + C    + + C   + +  ++     G   L S    
Sbjct: 54  GTAIDRLPPSVGNLQRLILLDLKDCTNLETLSDCTNLWNMRSLQELKLSGCSKLKSFPKN 113

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLFNLEKLKLED 199
           + +L  L L    + E  +P +I  +  L+ L LS+++ + TL  +IN L++L+ L+L  
Sbjct: 114 IENLRNLLLEGTAITE--MPQNINGMSLLRRLCLSRSDEICTLQFNINELYHLKWLELMY 171

Query: 200 CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS-----SCTIIDFVDSLKLLGKNG 254
           CK L SL  LPPN++ +  +GC SL T+   L L  S     S  I      L+ + KN 
Sbjct: 172 CKNLTSLLGLPPNLQFLYAHGCTSLKTVSSPLALLISTEQIHSTFIFTNCHELEQVSKND 231

Query: 255 LAISMLREFLEVVSAPSHKFSIVV--------PGSEIPKWFMYQNEGSSITVTRPSYLCN 306
           + +S ++      S   +    VV        PGS++P+WF +Q  GS +    P +   
Sbjct: 232 I-MSSIQNTRHPTSYDQYNRGFVVKSLISTCFPGSDVPQWFKHQAFGSVLKQELPRHWYE 290

Query: 307 MNQVVGYAACRV 318
             +V G A C V
Sbjct: 291 -GRVNGLALCVV 301



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E LR LLL+ T I EMP +I  +S L +L L     +  L  NIN L  LK L L+ C 
Sbjct: 114 IENLRNLLLEGTAITEMPQNINGMSLLRRLCLSRSDEICTLQFNINELYHLKWLELMYCK 173

Query: 61  KFENLL 66
              +LL
Sbjct: 174 NLTSLL 179


>gi|336238978|gb|AEI27416.1| TIR_3 [Helianthus annuus]
          Length = 1111

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 127/265 (47%), Gaps = 38/265 (14%)

Query: 3   CLRELLLDKTD-IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           CL  L+L   + ++E+  SI     LV + ++ C  L R P  I+ +K L+TL+L  C +
Sbjct: 703 CLERLILVCCESLEEIHPSIGYHKSLVFVDMRLCSALKRFPPIIH-MKKLETLDLSWCKE 761

Query: 62  FENLLETVGQVESLEELDISGTAIRC-PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +   +    ++SL  LD+  T I   PPS      NL + S  GC         +    
Sbjct: 762 LQQFPDIQSNMDSLVTLDLCLTRIEIIPPSVGRFCTNLVSFSLHGCRKLKRIEGNF---- 817

Query: 121 INLMRRSSDL---GALMLPSLSGLGS-----------LTKLDLSDCGLGEGAIPSDIG-N 165
            +L++   DL   G + L S    GS           L KL+L  C LG+G IPSDI   
Sbjct: 818 -HLLKSLKDLNLSGCIGLQSFHHEGSVSLKLPRFPRFLRKLNLHRCNLGDGDIPSDIFCK 876

Query: 166 LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL- 224
           L +L+ L LS+NNF  LP+ ++ +  L+ L L DC  L  LP LP ++  ++ NGC SL 
Sbjct: 877 LLNLQVLDLSENNFSRLPSDLSQILCLKLLNLSDCINLVELPDLPSSIAILKANGCDSLE 936

Query: 225 --------------VTLLGALKLRK 235
                         V+LLG +KL K
Sbjct: 937 IARGDLSYCKWLWKVSLLGVVKLNK 961


>gi|297791249|ref|XP_002863509.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309344|gb|EFH39768.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1133

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 151/324 (46%), Gaps = 41/324 (12%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L L+GC +L  L  +++S KSLKTL L GC  F+   E     E+LE L +  TAI   P
Sbjct: 683 LNLEGCTSLESL-GDVDS-KSLKTLTLSGCTSFK---EFPLIPENLEALHLDRTAISQLP 737

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG------LGS 143
            +I  +K L  L+ + C               N+     +L AL    LSG        +
Sbjct: 738 DNIVNLKKLVLLTMKDCK-----------MLENIPTEVDELTALQKLVLSGCLKLKEFPA 786

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLKLEDCKR 202
           + K  L    L   +I + +  L S++ LYLS+N+ ++ LPA IN LF L  L L+ CK 
Sbjct: 787 INKSPLKILFLDGTSIKT-VPQLPSVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKS 845

Query: 203 LQSLPQLPPNVEKVRVNGCASLVT----LLGALKLRKSSCTIIDFVDSLKL--LGKNGLA 256
           L S+P+LPPN+  +  +GC+SL T    L   L   ++ C+  +F +  KL    K+ + 
Sbjct: 846 LTSIPELPPNLHYLDAHGCSSLKTVAKPLARILPTVQNHCS-FNFTNCCKLEQAAKDEIT 904

Query: 257 ISMLREFLEVVSAPSHK---------FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNM 307
           +   R+   +  A  H          FS   PG E+P WF ++  GS +    P +  + 
Sbjct: 905 LYSQRKCQLLSYARKHYNGGLSSEALFSTCFPGCEVPSWFCHEAVGSLLGRKLPPHW-HE 963

Query: 308 NQVVGYAACRVFHVPKHSTGIRRF 331
            ++ G + C V   P     I  F
Sbjct: 964 KKLSGISLCAVVSFPAGQNQISSF 987


>gi|297791369|ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309404|gb|EFH39828.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1177

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 79/373 (21%)

Query: 4    LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L+D   + E+P SI  ++ L++L L GC +LV+LPS+I +L +LK L L  C   
Sbjct: 682  LQELRLVDCLSLVELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSL 741

Query: 63   ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSA----- 113
              L  ++G V SL+EL++SG +++   PSSI    NLK L   GC+     PSS      
Sbjct: 742  VQLPSSIGNVTSLKELNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIAN 801

Query: 114  ---------SCYLPFPINLMR--RSSDL------GALMLPSLSGLGSLTKLDLSDCGLGE 156
                     S  + FP ++++  R  DL        + LPS+  + +L  L LS C    
Sbjct: 802  LRELQLMNCSSLIEFPSSILKLTRLKDLNLSGCSSLVKLPSIGNVINLQTLFLSGCS-SL 860

Query: 157  GAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPN 212
              +P  I N  +L+TLYL+  ++ + LP+SI  + NL+ L L  C  L+ LP L     N
Sbjct: 861  VELPFSIENATNLQTLYLNGCSDLLELPSSIWNITNLQSLYLNGCSSLKELPSLVGNAIN 920

Query: 213  VEKVRVNGCASLVTLLGAL-------KLRKSSCT-------------------------- 239
            ++ + +  C+S+V L  ++        L  SSC+                          
Sbjct: 921  LQSLSLMNCSSMVELPSSIWNATNLSYLDVSSCSSLVGLNIKLELNQCRKLVSHPVVPDS 980

Query: 240  -IIDFVDSLKLLGKNGLAIS-------------MLREFLEVVSAPSHKFSIVVPGSEIPK 285
             I+D  D   L+ +   +               + +E  +++   S   + ++PG ++P 
Sbjct: 981  LILDAGDCESLVERLDCSFQNPKIVLNFANCFKLNQEARDLIIQTSTCRNAILPGGKVPA 1040

Query: 286  WFMYQNEGSSITV 298
            +F Y+  G S+TV
Sbjct: 1041 YFTYRATGDSLTV 1053


>gi|297791265|ref|XP_002863517.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309352|gb|EFH39776.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1124

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 157/325 (48%), Gaps = 44/325 (13%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           +  LV L L+GC  L  LP +IN L SL+TL L GC    NL E     E+L+ L + GT
Sbjct: 497 MESLVFLNLRGCTGLRHLP-DIN-LSSLRTLILSGC---SNLQEFRLISENLDYLYLDGT 551

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
           AI   PS I  ++ L  L+ + C    S   C        + +   L  L+L   S L S
Sbjct: 552 AIEDLPSEIVKLQKLILLNLKECRRLGSLPEC--------IGKLKSLKELILSGCSNLKS 603

Query: 144 LTKLD---------LSDCGLGEGAIPSDI-GN--LHSLKTLYLSKNNFVT-LPASINCLF 190
              ++         L D G     +P  + GN  +  L+ L LS+N+ ++ L + I+ L+
Sbjct: 604 FPNVEENMENFRVLLLD-GTSIEEVPKILHGNNSISFLRRLSLSRNDVISSLGSDISQLY 662

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSSCTIIDFVDSL 247
           +L+ L L+ CK+L+ L  LPPN++ +  +GC SL T+   L  L   +   ++  F +  
Sbjct: 663 HLKWLDLKYCKKLRCLSTLPPNLQCLDAHGCISLETVTSPLAFLMPMEDIHSMFIFTNCC 722

Query: 248 KL--LGKNGLAISMLREFLEVVSAPSHKFSIVV--------PGSEIPKWFMYQNEGSSIT 297
           KL    KN +A S +R   +++S   H  S V         PG E+P WF +Q   S + 
Sbjct: 723 KLNDAAKNDIA-SHIRRKCQLISDDHHNGSFVFRALIGTCYPGYEVPPWFSHQAFDSVVE 781

Query: 298 VTRPSYLCNMNQVVGYAACRV--FH 320
              P + C+ N+ +G A C +  FH
Sbjct: 782 RKLPPHWCD-NKFLGLALCAIVSFH 805


>gi|357513699|ref|XP_003627138.1| Resistance protein [Medicago truncatula]
 gi|355521160|gb|AET01614.1| Resistance protein [Medicago truncatula]
          Length = 1050

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 185/434 (42%), Gaps = 70/434 (16%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           LV + L  C+ L  L S    L+ L+ +N+ GC     L E     +S+E LD+S T I+
Sbjct: 548 LVTVLLDRCEKLQSLKSE-KHLRYLEKINVNGC---SQLKEFSVFSDSIESLDLSNTGIK 603

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---------GALMLPS 137
              SSI  M+ L  L+  G           LP  ++ +R  ++L          + +   
Sbjct: 604 ILQSSIGRMRKLVWLNLEGLRLKN------LPNELSNLRSLTELWLCNCNIVTTSKLESI 657

Query: 138 LSGLGSLTKLDLSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
             GL SLT+L L DC  L E  IP++I +L SL  L L  ++   LPA+I  +  LE + 
Sbjct: 658 FDGLESLTRLYLKDCRYLIE--IPANISSLSSLYELRLDGSSVKFLPANIKYVLRLEIIS 715

Query: 197 LEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS------------CTIID-- 242
           L++C +L+ LP+LPP++++     C SLVT +  LK    S            CT +D  
Sbjct: 716 LDNCTKLRILPELPPHIKEFHAENCTSLVT-ISTLKTFSGSMNGKDIYISFKNCTSLDGP 774

Query: 243 -----FVDSLKLLGKNGLAISMLREF-LEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSI 296
                  D++  +        ++R++ L+  +   ++    +PG  +P+ F YQ + S I
Sbjct: 775 SLHGNLEDAISTMKSAAFHNILVRKYSLQTRNYNYNRAEFCLPGRRVPRQFQYQTKESCI 834

Query: 297 TVTRPSYLCNMNQVVGYAACRVFHVPKHST---GI----------RRFYRYPHPAHVLHC 343
            +     L  ++  +G+    +   P  +T   G+          R+   Y    H    
Sbjct: 835 NIE----LSKLSYSLGFIFSVIIAPPPINTFNDGLTIQCQCYSKDRKMVGYASKWH---- 886

Query: 344 SMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSF-MDEREKHCPAGSGTGLKV 402
              +      SDH+++ Y P   Y  ++ W  +  +    F +          +   + +
Sbjct: 887 --HKNTTRLNSDHIFVWYDP---YISDIIWESDETNVTFEFSVSTVSAEGVYNNFMTVTM 941

Query: 403 KRCGFHPGYMHEVE 416
           K CG  P Y  E +
Sbjct: 942 KECGICPIYFSEFQ 955


>gi|359473398|ref|XP_002268324.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1378

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 43/304 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L  L+LD + I E+P SI  L  L  L L  CK L RLP++I  LK+L +L +    
Sbjct: 954  MSSLTTLILDNSLITELPESIGKLERLNMLMLNNCKQLQRLPASIRKLKNLCSLLM---- 1009

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                                + TA+   P +  ++ NL+TL       P   A+      
Sbjct: 1010 --------------------TRTAVTELPENFGMLSNLRTLKM--AKHPDPEATGEHTEL 1047

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             NL+ + +    ++L S S L  L +LD     +  G+I SD   L SL+ L L  NNF 
Sbjct: 1048 TNLILQENPKPVVLLMSFSNLFMLKELDARAWKIS-GSI-SDFEKLSSLEDLNLGHNNFC 1105

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--VTLLGALK----LR 234
            +LP+S+  L  L+ L L  CK + SLP LP ++ K+ V+ C +L  V+ L  LK    L 
Sbjct: 1106 SLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSNCCALQSVSDLSNLKSLEDLN 1165

Query: 235  KSSC-TIIDF-----VDSLKLLGKNG--LAISMLREFLEVVSAPSHKFSIVVPGSEIPKW 286
             ++C  I+D      + SLK    +G    +  L+  +  V A  H +++ VPGSEIP W
Sbjct: 1166 LTNCKKIMDIPGLQCLKSLKRFYASGCNACLPALKSRITKV-ALKHLYNLSVPGSEIPNW 1224

Query: 287  FMYQ 290
            F+ +
Sbjct: 1225 FVQE 1228



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 9/198 (4%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L+ L L GC NL+  PS+++ L+ L+  NL GC K + L E +  + SL EL 
Sbjct: 715 SVGDLRTLLHLNLMGCSNLLEFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELL 774

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM--LP- 136
           +  TAI   P SIF +K L+  S   C+       C     ++ +R  S  G+ +  LP 
Sbjct: 775 VDKTAIVNLPDSIFRLKKLEKFSLDSCSSLKQLPDCI--GRLSSLRELSLNGSGLEELPD 832

Query: 137 SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
           S+  L +L +L L  C L   AIP  +G L SL  L++  ++   LPASI  L  L  L 
Sbjct: 833 SIGSLTNLERLSLMRCRL-LSAIPDSVGRLRSLIELFICNSSIKELPASIGSLSQLRYLS 891

Query: 197 LEDCKRLQSLPQLPPNVE 214
           L  C+   SL +LP ++E
Sbjct: 892 LSHCR---SLIKLPDSIE 906



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 127/262 (48%), Gaps = 40/262 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
            M  LRELL+DKT I  +P SI  L  L + +L  C +L +                    
Sbjct: 767  MTSLRELLVDKTAIVNLPDSIFRLKKLEKFSLDSCSSLKQLPDCIGRLSSLRELSLNGSG 826

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LP +I SL +L+ L+L+ C     + ++VG++ SL EL I  ++I+  P+SI  +  
Sbjct: 827  LEELPDSIGSLTNLERLSLMRCRLLSAIPDSVGRLRSLIELFICNSSIKELPASIGSLSQ 886

Query: 98   LKTLSFRGCNG---PPSSASCYLPFPINLMRRSSDLGALM--LPSLSG-LGSLTKLDLSD 151
            L+ LS   C      P S        ++L R   D G L+  +P   G L  L  L++ +
Sbjct: 887  LRYLSLSHCRSLIKLPDSIEGL----VSLARFQLD-GTLLTGVPDQVGSLNMLETLEMRN 941

Query: 152  CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            C +   + P +I N+ SL TL L  +    LP SI  L  L  L L +CK+LQ   +LP 
Sbjct: 942  CEIF-SSFP-EINNMSSLTTLILDNSLITELPESIGKLERLNMLMLNNCKQLQ---RLPA 996

Query: 212  NVEKVRVNGCASLVTLLGALKL 233
            ++ K++ N C+ L+T     +L
Sbjct: 997  SIRKLK-NLCSLLMTRTAVTEL 1017



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 49/183 (26%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            L+ + L GC +L  LP +++  ++L+ L L  C     + ++VG + +L  L++ G   
Sbjct: 674 NLMVMNLSGCNSLTDLP-DVSGHQTLEKLILERCLSLVTIHKSVGDLRTLLHLNLMG--- 729

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT 145
                                       S  L FP                 +SGL  L 
Sbjct: 730 ---------------------------CSNLLEFP---------------SDVSGLRHLE 747

Query: 146 KLDLSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
             +LS C  L E  +P D+ ++ SL+ L + K   V LP SI  L  LEK  L+ C  L+
Sbjct: 748 IFNLSGCTKLKE--LPEDMSSMTSLRELLVDKTAIVNLPDSIFRLKKLEKFSLDSCSSLK 805

Query: 205 SLP 207
            LP
Sbjct: 806 QLP 808


>gi|449528475|ref|XP_004171230.1| PREDICTED: uncharacterized protein LOC101229421 [Cucumis sativus]
          Length = 666

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 181/402 (45%), Gaps = 46/402 (11%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T+++ +  SI  LS LV L L  C NL +LPS + +LKSL+ LNL  C K E + +    
Sbjct: 37  TNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYL-TLKSLEYLNLAHCKKLEEIPDFSSA 95

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + +L+ L +   T +R    SI  + +L TL  R C       S      +     S   
Sbjct: 96  L-NLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLKLKSLRHFELSGCH 154

Query: 131 GALMLPSLS-GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINC 188
              M P ++  + SL  L L    + E  +PS IG L +L  L L    N ++LP++I  
Sbjct: 155 KLEMFPKIAENMKSLISLHLDSTAIRE--LPSSIGYLTALFVLNLHGCTNLISLPSTIYL 212

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
           L +L  L+L +CK LQ +P LP  ++K+   GC    TLLG     +S   I+D + S  
Sbjct: 213 LMSLWNLQLRNCKFLQEIPNLPHCIQKMDATGC----TLLG-----RSPDNIMDIISS-- 261

Query: 249 LLGKNGLAI-SMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNM 307
              K  +A+    REF             V+  + IP+WF YQ+  +SI V+    L NM
Sbjct: 262 ---KQDVALGDFTREF-------------VLMNTGIPEWFSYQSISNSIRVSFRHDL-NM 304

Query: 308 NQVVG-YAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQS 366
            +++  YA  +V  V     G+          + L      KF    S++ WL+     +
Sbjct: 305 ERILATYATLQV--VGDSYQGMALVSCKIFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPT 362

Query: 367 YYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFH 408
           +  +++ + E NH  + F           S   + +K CG H
Sbjct: 363 FSTSLEMN-EWNHVTVWF------EVVKCSEATVTIKCCGVH 397



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L  L LD T I+E+P SI  L+ L  L L GC NL+ LPS I  L SL  L L  C 
Sbjct: 166 MKSLISLHLDSTAIRELPSSIGYLTALFVLNLHGCTNLISLPSTIYLLMSLWNLQLRNC- 224

Query: 61  KFENLLETVGQVESLEELDISGTAI 85
           KF  L E       ++++D +G  +
Sbjct: 225 KF--LQEIPNLPHCIQKMDATGCTL 247


>gi|357480743|ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1128

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 185/445 (41%), Gaps = 96/445 (21%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCFKFENLLE-TVGQVESLEE 77
            S+ LL+ LV L+L+ C NL  L   +++ + SL+ L L GC    N  + TV    +LE 
Sbjct: 651  SVGLLTELVFLSLQNCTNLTCLDFGSVSRVWSLRVLRLSGCIGLRNTPDFTVAA--NLEY 708

Query: 78   LDISGTAIRCP-----PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-NLMRRSSDLG 131
            LD+     RC        SI  +  L+ LS R C            FPI N+    + L 
Sbjct: 709  LDME----RCINLSKIDKSIGTLTKLRFLSLRHCTKL---------FPISNIFDNMTSLT 755

Query: 132  AL---------MLP------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
             L          LP      S S L SL  LDLS C +    +P  IG L SL+ L L  
Sbjct: 756  TLDLCECWNFTTLPLPTTVNSPSPLESLIFLDLSFCNIS--VLPDSIGKLKSLERLNLQG 813

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
            N+F TLP++   L NL  L L  C RL+ LP+LP   +  + +            +  +S
Sbjct: 814  NHFTTLPSTFKRLANLAYLNLSHCHRLKRLPKLP--TKSGQSDSVGRYFKTTSGSRDHRS 871

Query: 237  SCTIIDFVDSLKLL---GKNGLAISMLREFLEVVSAPSH---KFSIVVPGSE-------- 282
               I D     K L      G+    L+   +    P H    F IV+P           
Sbjct: 872  GLYIYDCPKLTKRLFSCEDPGVPFKWLKRLFK---EPRHFRCGFDIVLPLHRKHIDLHGN 928

Query: 283  --IPKWFMYQNEGSSITVTRPSYLCNMN-QVVGYAACRVFHV---PKHSTGIRRFYRYPH 336
              IP+WF Y+ E  SI   + S   NM+   VG+A C  F +   P  S    RF+  P 
Sbjct: 929  PLIPQWFDYKFEKGSIITIKNS---NMHVDWVGFAFCVAFQIDNRPAVSGSPYRFHSSPL 985

Query: 337  P---------AHVLHCSMD-----EKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRL 382
            P          H   C  D     E+    GS+++W++Y+ R+  +C    HF     ++
Sbjct: 986  PYPFCLSFESEHTEEC-FDMPLSLERNKVAGSNYIWVIYISRE--HC----HFVKTGAQI 1038

Query: 383  SFMDEREKHCPAGSGTGLKVKRCGF 407
            +F    + H       GL +K+ GF
Sbjct: 1039 TFKAGEDGH-------GLIMKKWGF 1056


>gi|357474805|ref|XP_003607688.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508743|gb|AES89885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1353

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 146/318 (45%), Gaps = 44/318 (13%)

Query: 26   GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
             L +L L+GC  LV+L S+I  L  L  LNL  C    +L+  +  +  L++L++S    
Sbjct: 984  NLERLDLEGCIKLVQLDSSIRLLTKLVYLNLNDCKSIISLISNIFGLGCLDDLNMS---- 1039

Query: 86   RCPPSSIFLMKNLKTLSFRGCNGPPSSASCY--LPFPINLMRRSSDLGALMLPSLSGLGS 143
                       N + L+    +    ++S +  +  P   +  +      + PS  GL  
Sbjct: 1040 ----------YNPRHLNISASHSQSRTSSIFRWITLPYQYLFPTPTTHTNLFPSWHGL-- 1087

Query: 144  LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
              +LD+S CGL +  IP+ IG L+ L  L +  NNFVT+P+    L  L  L LE   +L
Sbjct: 1088 -RELDISFCGLCQ--IPNSIGCLYWLVGLNVGGNNFVTVPSPRE-LSKLVYLNLEHRPQL 1143

Query: 204  QSLPQLPPNV--EKVRVNGCASLVTLLGALKL--------RKSSCTIIDFVDSLKLLGKN 253
            +SLP+LP +   E    +    +   L  L +        R+  CT + F   ++L+  N
Sbjct: 1144 KSLPKLPSHTAFEHDYFSNSLGVTQWLTGLLIFNCPNLGEREHCCTNMTFSWMIQLIQAN 1203

Query: 254  GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV-TRPSYLCNMNQVVG 312
              +     + ++          IV PGSEIP WF  QN+G SI + + P    N N ++G
Sbjct: 1204 PQSFPDCYDIIQ----------IVTPGSEIPSWFNNQNKGDSIRLDSSPIMHDNNNNIIG 1253

Query: 313  YAACRVFHV-PKHSTGIR 329
               C VF + P H T IR
Sbjct: 1254 CICCVVFSIAPHHPTMIR 1271


>gi|154424272|gb|ABS82021.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 48/353 (13%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L+D + + ++P SI  L+ L +L L  C +LV+LPS+  ++ SLK LNL GC     +  
Sbjct: 711  LIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPS 770

Query: 68   TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMR 125
            ++G + +L++L   G +++   PSSI    NLK L    C+      S  L    +  + 
Sbjct: 771  SIGNIVNLKKLYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLN 830

Query: 126  RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
             S  L  + LPS+  + +L  L LSDC      +P  I N  +L TLYL   +N + LP+
Sbjct: 831  LSGCLSLVKLPSIGNVINLQSLYLSDCS-SLMELPFTIENATNLDTLYLDGCSNLLELPS 889

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGAL-------KLR 234
            SI  + NL+ L L  C  L+ LP L     N++ + +  C+SLV L  ++        L 
Sbjct: 890  SIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLD 949

Query: 235  KSSCT-----------------IID-------------FVDSLKLLGKNGLAISMLREFL 264
             S+C+                 I+D             F  + K++        + +E  
Sbjct: 950  VSNCSSLVELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVLNFANCFKLNQEAR 1009

Query: 265  EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAAC 316
            +++   S   + ++PG ++P +F Y+  G S+TV     YL    Q + + AC
Sbjct: 1010 DLIIQTSACRNAILPGEKVPAYFTYRATGDSLTVKLNQKYLL---QSLRFKAC 1059



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 100/211 (47%), Gaps = 29/211 (13%)

Query: 22  ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD-I 80
           E +  L  + L  C NL  LP + ++  +L+ L L+ C     L  ++G V +L ELD I
Sbjct: 654 EPIRNLKWMDLSFCVNLKELP-DFSTATNLQELRLINCLSLVELPSSIGNVTNLLELDLI 712

Query: 81  SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG 140
             +++   PSSI  + NLK L    C     S+   LP                  S   
Sbjct: 713 DCSSLVKLPSSIGNLTNLKKLFLNRC-----SSLVKLP-----------------SSFGN 750

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLED 199
           + SL +L+LS C      IPS IGN+ +LK LY    ++ V LP+SI    NL++L L +
Sbjct: 751 VTSLKELNLSGCS-SLLEIPSSIGNIVNLKKLYADGCSSLVQLPSSIGNNTNLKELHLLN 809

Query: 200 CKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           C  L   P    N   +E + ++GC SLV L
Sbjct: 810 CSSLMECPSSMLNLTRLEDLNLSGCLSLVKL 840


>gi|449443196|ref|XP_004139366.1| PREDICTED: LOW QUALITY PROTEIN: protein SUPPRESSOR OF npr1-1,
            CONSTITUTIVE 1-like [Cucumis sativus]
          Length = 1253

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 181/402 (45%), Gaps = 46/402 (11%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T+++ +  SI  LS LV L L  C NL +LPS + +LKSL+ LNL  C K E + +    
Sbjct: 688  TNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYL-TLKSLEYLNLAHCKKLEEIPDFSSA 746

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            + +L+ L +   T +R    SI  + +L TL  R C       S      +     S   
Sbjct: 747  L-NLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLKLKSLRHFELSGCH 805

Query: 131  GALMLPSLS-GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINC 188
               M P ++  + SL  L L    + E  +PS IG L +L  L L    N ++LP++I  
Sbjct: 806  KLEMFPKIAENMKSLISLHLDSTAIRE--LPSSIGYLTALLVLNLHGCTNLISLPSTIYL 863

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
            L +L  L+L +CK LQ +P LP  ++K+   GC    TLLG     +S   I+D + S  
Sbjct: 864  LMSLWNLQLRNCKFLQEIPNLPHCIQKMDATGC----TLLG-----RSPDNIMDIISS-- 912

Query: 249  LLGKNGLAI-SMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNM 307
               K  +A+    REF             ++  + IP+WF YQ+  +SI V+    L NM
Sbjct: 913  ---KQDVALGDFTREF-------------ILMNTGIPEWFSYQSISNSIRVSFRHDL-NM 955

Query: 308  NQVVG-YAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQS 366
             +++  YA  +V  V     G+          + L      KF    S++ WL+     +
Sbjct: 956  ERILATYATLQV--VGDSYQGMALVSCKIFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPT 1013

Query: 367  YYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFH 408
            +  +++ + E NH  + F           S   + +K CG H
Sbjct: 1014 FSTSLEMN-EWNHVTVWF------EVVKCSEATVTIKCCGVH 1048



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 35/59 (59%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M+ L  L LD T I+E+P SI  L+ L+ L L GC NL+ LPS I  L SL  L L  C
Sbjct: 817 MKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLMSLWNLQLRNC 875


>gi|51477386|gb|AAU04759.1| MRGH11 [Cucumis melo]
          Length = 1001

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 117/225 (52%), Gaps = 14/225 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L LD + I  +  SI  L+GLV L L  C  L  LP  I +LKSLKTL L  C 
Sbjct: 726 MEHLTHLHLDGSKITHLHPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLLLKYCK 785

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIF-LMKNLKTLSFRGCNGPPSSASCYLPF 119
           + + +  ++   ESLE L IS T+I   PSSI   +KNL+TL    C          L  
Sbjct: 786 RLDKIPPSLANAESLETLSISETSITHVPSSIIHCLKNLETLD---CEELSRGIWKSLLP 842

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
            +N+ +  +          +GLG L  L+L  C L +  IP D+    SL+TL LS NNF
Sbjct: 843 QLNINQTIT----------TGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNF 892

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            TLP S++ L  L+ L L  C  L+ LP+LP +++ V    C S+
Sbjct: 893 TTLPDSLSHLKKLKTLILNYCTELKDLPKLPESLQYVGGVDCRSM 937



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 30/218 (13%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SI  L+ L+ L L+GC +L   P+NI   K+L+TL L G      +   +G +E L
Sbjct: 673 EIHPSINSLNKLILLDLEGCGDLKHFPANIRC-KNLQTLKLSGTGL--EIFPEIGHMEHL 729

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
             L + G+ I     SI  +  L  L    C G  S     LPF I         G L  
Sbjct: 730 THLHLDGSKITHLHPSIGYLTGLVFLDLSTCLGLSS-----LPFEI---------GNLKS 775

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS-INCLFNLEK 194
                L    +LD          IP  + N  SL+TL +S+ +   +P+S I+CL NLE 
Sbjct: 776 LKTLLLKYCKRLD---------KIPPSLANAESLETLSISETSITHVPSSIIHCLKNLET 826

Query: 195 LKLEDCKR---LQSLPQLPPNVEKVRVNGCASLVTLLG 229
           L  E+  R      LPQL  N       GC   + L+G
Sbjct: 827 LDCEELSRGIWKSLLPQLNINQTITTGLGCLKALNLMG 864


>gi|15241520|ref|NP_199264.1| target of AVRB operation1 protein [Arabidopsis thaliana]
 gi|9758704|dbj|BAB09158.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007735|gb|AED95118.1| target of AVRB operation1 protein [Arabidopsis thaliana]
          Length = 1187

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 218/507 (42%), Gaps = 81/507 (15%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L+D + + ++P SI  L+ L +L L  C +LV+LPS+  ++ SLK LNL GC     +  
Sbjct: 711  LIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPS 770

Query: 68   TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMR 125
            ++G + +L+++   G +++   PSSI    NLK L    C+      S  L    +  + 
Sbjct: 771  SIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLN 830

Query: 126  RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
             S  L  + LPS+  + +L  L LSDC      +P  I N  +L TLYL   +N + LP+
Sbjct: 831  LSGCLSLVKLPSIGNVINLQSLYLSDCS-SLMELPFTIENATNLDTLYLDGCSNLLELPS 889

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGAL-------KLR 234
            SI  + NL+ L L  C  L+ LP L     N++ + +  C+SLV L  ++        L 
Sbjct: 890  SIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLD 949

Query: 235  KSSCT-----------------IID-------------FVDSLKLLGKNGLAISMLREFL 264
             S+C+                 I+D             F  + K++        + +E  
Sbjct: 950  VSNCSSLLELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVLNFANCFKLNQEAR 1009

Query: 265  EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAACRVFHVPK 323
            +++   S   + ++PG ++P +F Y+  G S+TV     YL    Q + + AC +    +
Sbjct: 1010 DLIIQTSACRNAILPGEKVPAYFTYRATGDSLTVKLNQKYLL---QSLRFKACLLLVEGQ 1066

Query: 324  HSTGIRRFYRYPHPAHVLHCSMDEKFGH----RGSDHLWLLYLPRQSYYCNVKWHFESNH 379
            +        ++P+    L  S  E  GH      S HL    L    Y    +    S+ 
Sbjct: 1067 N--------KWPNWGMNLVTSR-EPDGHIVLYTPSSHLQGPLLMENLYTFEFELVVTSSE 1117

Query: 380  FRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHD 439
            F L F  +R K C  G     +  + G H  + H +++++          S +   F  D
Sbjct: 1118 FVLEFRADRYK-CALG-----RFDKFGVHVVWCH-LDQYES--------KSPSCKPFWRD 1162

Query: 440  FVGSNMAVAKANGSGCCDDYDEEPQPN 466
            F      +  +NG    D   + P P+
Sbjct: 1163 F-----PIVISNGQNILDAILKTPMPS 1184



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 29/211 (13%)

Query: 22  ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD-I 80
           E +  L  + L  C NL  LP + ++  +L+ L L+ C     L  ++G   +L ELD I
Sbjct: 654 EPIRNLKWMDLSFCVNLKELP-DFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLI 712

Query: 81  SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG 140
             +++   PSSI  + NLK L    C     S+   LP                  S   
Sbjct: 713 DCSSLVKLPSSIGNLTNLKKLFLNRC-----SSLVKLP-----------------SSFGN 750

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLED 199
           + SL +L+LS C      IPS IGN+ +LK +Y    ++ V LP+SI    NL++L L +
Sbjct: 751 VTSLKELNLSGCS-SLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLN 809

Query: 200 CKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           C  L   P    N   +E + ++GC SLV L
Sbjct: 810 CSSLMECPSSMLNLTRLEDLNLSGCLSLVKL 840


>gi|357516579|ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355522600|gb|AET03054.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 215/491 (43%), Gaps = 105/491 (21%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSN---------------- 44
            +E L ELL   + IKE+P +I  LS L  L++  CK L +LP +                
Sbjct: 644  LESLTELLASNSGIKELPSTIGSLSYLRILSVGDCKLLNKLPDSFKNLASIIELKLDGTS 703

Query: 45   -------INSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                   I  LK L+ L +  C   E+L E++GQ+ SL  L+I    IR  P+SI L++N
Sbjct: 704  IRYLPDQIGELKQLRKLEIGNCCNLESLPESIGQLASLTTLNIVNGNIRELPASIGLLEN 763

Query: 98   LKTLSFRGCNG----PPS--------------SASCYLPFPINLMRR------------- 126
            L TL+   C      P S              +A   LP    ++ R             
Sbjct: 764  LVTLTLNQCKMLKQLPASVGNLKSLCHLMMMGTAMSDLPESFGMLSRLRTLRMAKNPDLV 823

Query: 127  ---SSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
               + +  + ++PS    L  L++LD     L  G IP +   L  LKTL L +NNF +L
Sbjct: 824  SKYAENTDSFVIPSSFCNLTLLSELDACAWRLS-GKIPDEFEKLSLLKTLNLGQNNFHSL 882

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-----LGAL-KLRKS 236
            P+S+  L  L++L L +C  L SLP LP ++  +  + C +L T+     L +L +L+ +
Sbjct: 883  PSSLKGLSILKELSLPNCTELISLPSLPSSLIMLNADNCYALETIHDMSNLESLEELKLT 942

Query: 237  SC-TIIDF--------VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
            +C  +ID         +  L L G N  +  + +   +VV       S+  PG+++P+W 
Sbjct: 943  NCKKLIDIPGLECLKSLRRLYLSGCNACSSKVCKRLSKVVLRNFQNLSM--PGTKLPEWL 1000

Query: 288  MYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDE 347
              +    +++ ++   L   + V+G     +F + +++   +        A VL    +E
Sbjct: 1001 SRE----TVSFSKRKNLELTSVVIGV----IFSIKQNNMKNQMSGVVDVQAKVLKLG-EE 1051

Query: 348  KFGHRGSDHLWLLYLPR---QSYY---CNVKWHFESNHFRLSFMDEREKHCPAGSG---- 397
             F    S  L++  +PR   Q  Y   CN      + H  +S + + +  C A       
Sbjct: 1052 IF----STSLYIGGVPRTDDQHIYLRRCN------NYHPLVSALKDSDTVCVAKRNPPFD 1101

Query: 398  TGLKVKRCGFH 408
              L++K+CG H
Sbjct: 1102 ERLELKKCGVH 1112



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 115/243 (47%), Gaps = 31/243 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINS------------- 47
           ++ L+ L  DKT I ++P SI  L+ L +L L  C  L RLP+ I               
Sbjct: 550 LKSLKTLAADKTAIVKLPESIFRLTKLERLVLDSCLYLRRLPNCIGKLCSLLELSLNHSG 609

Query: 48  ----------LKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                     LKSL+ L+L+GC     + +++G +ESL EL  S + I+  PS+I  +  
Sbjct: 610 LQELHNTVGFLKSLEKLSLIGCKSLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSY 669

Query: 98  LKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCG 153
           L+ LS   C   N  P S    L   I L    + +    LP   G L  L KL++ +C 
Sbjct: 670 LRILSVGDCKLLNKLPDSFK-NLASIIELKLDGTSIR--YLPDQIGELKQLRKLEIGNCC 726

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
             E ++P  IG L SL TL +   N   LPASI  L NL  L L  CK L+ LP    N+
Sbjct: 727 NLE-SLPESIGQLASLTTLNIVNGNIRELPASIGLLENLVTLTLNQCKMLKQLPASVGNL 785

Query: 214 EKV 216
           + +
Sbjct: 786 KSL 788



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 89/184 (48%), Gaps = 4/184 (2%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
           C+NL+ LPS+++ LK L++L L  C K + L E +G ++SL+ L    TAI   P SIF 
Sbjct: 513 CENLIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFR 572

Query: 95  MKNLKTLSFRGCNGPPSSASCY--LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           +  L+ L    C       +C   L   + L    S L  L   ++  L SL KL L  C
Sbjct: 573 LTKLERLVLDSCLYLRRLPNCIGKLCSLLELSLNHSGLQELH-NTVGFLKSLEKLSLIGC 631

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
                 +P  IGNL SL  L  S +    LP++I  L  L  L + DCK L  LP    N
Sbjct: 632 K-SLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRILSVGDCKLLNKLPDSFKN 690

Query: 213 VEKV 216
           +  +
Sbjct: 691 LASI 694



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 101/241 (41%), Gaps = 43/241 (17%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLN-------------------- 55
           E+P  +  L  L  L L  C  L  LP NI  LKSLKTL                     
Sbjct: 518 ELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLE 577

Query: 56  ---LLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS 112
              L  C     L   +G++ SL EL ++ + ++   +++  +K+L+ LS  GC      
Sbjct: 578 RLVLDSCLYLRRLPNCIGKLCSLLELSLNHSGLQELHNTVGFLKSLEKLSLIGCK----- 632

Query: 113 ASCYLPFPINLMRRSSDL-----GALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNL 166
           +   +P  I  +   ++L     G   LPS  G L  L  L + DC L    +P    NL
Sbjct: 633 SLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRILSVGDCKL-LNKLPDSFKNL 691

Query: 167 HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
            S+  L L   +   LP  I  L  L KL++ +C  L+SLP+         +   ASL T
Sbjct: 692 ASIIELKLDGTSIRYLPDQIGELKQLRKLEIGNCCNLESLPE--------SIGQLASLTT 743

Query: 227 L 227
           L
Sbjct: 744 L 744


>gi|224098439|ref|XP_002334559.1| predicted protein [Populus trichocarpa]
 gi|222873097|gb|EEF10228.1| predicted protein [Populus trichocarpa]
          Length = 422

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 160/393 (40%), Gaps = 66/393 (16%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
           GC  L  LP +I  LKSL+T+NL  C   + L E +G ++ L +L +  T ++  PSS  
Sbjct: 1   GCYGLQNLPESICELKSLETMNLQSCPSLKKLPEKLGNMQVLTDLLLDETGVQNLPSSTG 60

Query: 94  LMKNLKTLSFRGCN-GPPSSASCYLPFPINLMRRSS----------------DLGA---- 132
           ++K LK L  RG   G       Y P   +   R S                D  A    
Sbjct: 61  ILKKLKKLLVRGSGLGFGLEVQRYRPQASSFYSRQSRRLEAQLQRQEAFPSLDSNAFHSK 120

Query: 133 --------LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                    + PS SGL SLT LD+S+  L    I  ++G+L SL+ L L+ N+F  LPA
Sbjct: 121 ELALKQQPFLPPSFSGLSSLTTLDISNRYLSNNDISINLGSLSSLQDLNLAGNHFSELPA 180

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL----VTLLGALKLRKSSCTI 240
               L  LEKL L  C  L  + ++P ++  +    C SL    +    A  L    C  
Sbjct: 181 GTGHLAKLEKLDLSRCLNLLFISEIPSSLRALVARDCTSLEKVSIQSKTAPDLLLGGCGK 240

Query: 241 IDFVDSLKLLGKNGLAISM---------LREFLEVVSAPSHKFSIVVPGSEIPKWFM-YQ 290
           +  +  L+ + +N   I M          +E L  V +      +V+PGS++P WFM YQ
Sbjct: 241 LAEIQGLESV-ENKPVIRMENCNNLSNNSKEILLQVLSKGKLPDVVLPGSDVPHWFMQYQ 299

Query: 291 NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCS------ 344
            + SS     P     ++   G     V+   + +   R +     P  +  CS      
Sbjct: 300 RDRSSTKFRIPPLSAGLSP--GLIVWTVYAAIEVARCTRPYLNIQIPTCISLCSASIRKK 357

Query: 345 --------------MDEKFGHRGSDHLWLLYLP 363
                         +    G    DH W++Y+P
Sbjct: 358 KDDNELFYTRPCLDISSSHGCYDGDHSWVIYIP 390


>gi|296086817|emb|CBI32966.3| unnamed protein product [Vitis vinifera]
          Length = 1313

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 196/488 (40%), Gaps = 104/488 (21%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
            M+ L  L L  T IK++P SI  L  LV+L L  C    +                    
Sbjct: 750  MKSLGMLYLTNTAIKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTA 809

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LP +I SL+SL  L+L  C KFE   E  G ++SL  L +  TAI+  P SI  +++
Sbjct: 810  IKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLES 869

Query: 98   LKTLSFRGCNGPPSSASCYLPFPI---NLMRRSSDLGALML--------PSLSGLGSLTK 146
            L  L    C       S +  FP    N+ R    LG L L        P   G   L  
Sbjct: 870  LVELDLSNC-------SKFEKFPEKGGNMKR----LGVLYLTNTAIKDLPDSIGSLDLVD 918

Query: 147  LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
            LDLS+C   E   P    ++  L+TL L +     LP+SI+ +  L  L + +CK L+SL
Sbjct: 919  LDLSNCSQFE-KFPELKRSMLELRTLNLRRTAIKELPSSIDNVSGLWDLDISECKNLRSL 977

Query: 207  PQLPPNVEKVR---VNGCASLVTLLGALKLRK-----------SSCTI-----IDFVDSL 247
            P     +E +    + GC++L   L + +LR            +  T+     ++ +D+ 
Sbjct: 978  PDDISRLEFLESLILGGCSNLWEGLISNQLRNLGKLNTSQWKMAEKTLELPSSLERIDAH 1037

Query: 248  KLLGKNGLAISMLREFLEVVSAPSH-----KFSIVVPGSE-IPKWFMYQNEGSSITVTRP 301
                K  L+  +    L  + + +      K S V+P S  IP+W  Y N GS +T   P
Sbjct: 1038 HCTSKEDLSSLLWLCHLNWLKSATEELKCWKLSAVIPESSGIPEWIRYDNLGSELTTELP 1097

Query: 302  SYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSM-----------DEKFG 350
            +       ++G+    V+     S   R  Y   H +    C +           + +FG
Sbjct: 1098 TNWYEDPDLLGFVVSCVYQPIPTSHDPRISY---HFSSAFSCELNLHGNGFGFKDERRFG 1154

Query: 351  HRGS---------DHLWLLYLPRQSYYCNVKWHF-ESNHFRLSFMDEREKHCPAGSGTGL 400
             R           D +W+ + P+ +     K H   S H   SF      +C A     +
Sbjct: 1155 CRCECQGNFNDMIDQVWVWWYPKTAI---PKEHLHNSTHINASF-KSNTYYCDA-----V 1205

Query: 401  KVKRCGFH 408
             VK+CG +
Sbjct: 1206 NVKKCGIN 1213



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 116/243 (47%), Gaps = 32/243 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSN---------------- 44
           M  LR L L KT IKE+P SI+L S +  L L  C    + P N                
Sbjct: 563 MRSLRLLYLSKTAIKELPGSIDLES-VESLDLSYCSKFKKFPENGANMKSLRELDLTHTA 621

Query: 45  -------INSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                  I++ +SL+TL+L  C KFE      G + +L+EL ++ TAI+C P SI  +K+
Sbjct: 622 IKELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNLKELLLNNTAIKCFPDSIGYLKS 681

Query: 98  LKTLSFRGC----NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCG 153
           L+ L+   C    N P    +  +     L+ +++ +  L    +  L SL  LDLSDC 
Sbjct: 682 LEILNVSDCSKFENFPEKGGN--MKNLKQLLLKNTPIKDLP-DGIGELESLEILDLSDCS 738

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
             E   P   GN+ SL  LYL+      LP SI  L +L +L L +C + +  P+   N+
Sbjct: 739 KFE-KFPEKGGNMKSLGMLYLTNTAIKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNM 797

Query: 214 EKV 216
           + +
Sbjct: 798 KSL 800



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 114/250 (45%), Gaps = 41/250 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-------------KNLVRL------ 41
           M+ LREL L  T IKE+P+ I     L  L L  C             +NL  L      
Sbjct: 609 MKSLRELDLTHTAIKELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNLKELLLNNTA 668

Query: 42  ----PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               P +I  LKSL+ LN+  C KFEN  E  G +++L++L +  T I+  P  I  +++
Sbjct: 669 IKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTPIKDLPDGIGELES 728

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP---------SLSGLGSLTKLD 148
           L+ L    C       S +  FP       S LG L L          S+  L SL +LD
Sbjct: 729 LEILDLSDC-------SKFEKFPEKGGNMKS-LGMLYLTNTAIKDLPNSIGSLESLVELD 780

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           LS+C   E   P   GN+ SL  LYL+      LP SI  L +L +L L +C + +  P+
Sbjct: 781 LSNCSKFE-KFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSLESLVELDLSNCSKFEKFPE 839

Query: 209 LPPNVEKVRV 218
              N++ + V
Sbjct: 840 KGGNMKSLVV 849



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 122/277 (44%), Gaps = 46/277 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-------------KNLVRL------ 41
           M  L+ELLL+ T IK  P SI  L  L  L +  C             KNL +L      
Sbjct: 656 MRNLKELLLNNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTP 715

Query: 42  ----PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               P  I  L+SL+ L+L  C KFE   E  G ++SL  L ++ TAI+  P+SI  +++
Sbjct: 716 IKDLPDGIGELESLEILDLSDCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPNSIGSLES 775

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP---------SLSGLGSLTKLD 148
           L  L    C       S +  FP       S LG L L          S+  L SL +LD
Sbjct: 776 LVELDLSNC-------SKFEKFPEKGGNMKS-LGMLYLTNTAIKDLPDSIGSLESLVELD 827

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           LS+C   E   P   GN+ SL  L L       LP SI  L +L +L L +C + +  P+
Sbjct: 828 LSNCSKFE-KFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDLSNCSKFEKFPE 886

Query: 209 LPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
              N++++ V     L     A+K    S   +D VD
Sbjct: 887 KGGNMKRLGV-----LYLTNTAIKDLPDSIGSLDLVD 918



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 113/249 (45%), Gaps = 40/249 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
           M+ L++LLL  T IK++P  I  L  L  L L  C    +                    
Sbjct: 703 MKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFEKFPEKGGNMKSLGMLYLTNTA 762

Query: 41  ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
              LP++I SL+SL  L+L  C KFE   E  G ++SL  L ++ TAI+  P SI  +++
Sbjct: 763 IKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSLES 822

Query: 98  LKTLSFRGCNGPPSSASCYLPFPIN-------LMRRSSDLGALMLP-SLSGLGSLTKLDL 149
           L  L    C       S +  FP         ++ R  +     LP S+  L SL +LDL
Sbjct: 823 LVELDLSNC-------SKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDL 875

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           S+C   E   P   GN+  L  LYL+      LP SI  L +L  L L +C + +  P+L
Sbjct: 876 SNCSKFE-KFPEKGGNMKRLGVLYLTNTAIKDLPDSIGSL-DLVDLDLSNCSQFEKFPEL 933

Query: 210 PPNVEKVRV 218
             ++ ++R 
Sbjct: 934 KRSMLELRT 942



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 107/247 (43%), Gaps = 40/247 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP---SNINSLK-------- 49
           M C  E  L +  IKE P SIE       L   G  NL + P    N+ SL+        
Sbjct: 516 MRCPWEPYLKEIAIKEHPTSIENSRSFWDLDPCGHSNLEKFPGIQGNMRSLRLLYLSKTA 575

Query: 50  -----------SLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNL 98
                      S+++L+L  C KF+   E    ++SL ELD++ TAI+  P  I   ++L
Sbjct: 576 IKELPGSIDLESVESLDLSYCSKFKKFPENGANMKSLRELDLTHTAIKELPIGISNWESL 635

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML---------PSLSGLGSLTKLDL 149
           +TL    C       S +  FP  +     +L  L+L          S+  L SL  L++
Sbjct: 636 RTLDLSKC-------SKFEKFPA-IQGNMRNLKELLLNNTAIKCFPDSIGYLKSLEILNV 687

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           SDC   E   P   GN+ +LK L L       LP  I  L +LE L L DC + +  P+ 
Sbjct: 688 SDCSKFEN-FPEKGGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFEKFPEK 746

Query: 210 PPNVEKV 216
             N++ +
Sbjct: 747 GGNMKSL 753


>gi|296090136|emb|CBI39955.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 133/306 (43%), Gaps = 36/306 (11%)

Query: 15  KEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVES 74
           +E+  SI  L GL  L L+ CK+L  LPS+I  LK L  L+L GC   E   E    +E 
Sbjct: 81  QELLCSIGHLIGLQHLDLENCKDLSGLPSSIYGLKYLFELSLNGCSNLEAFSEIRFDMEH 140

Query: 75  LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
           L  L +SG  I   PSSI  + NL  L    C              + L     +L  L+
Sbjct: 141 LYNLRLSGMVITELPSSIERLTNLADLELTNCENL-----------VTLPNSIGNLTGLV 189

Query: 135 LPSLSGLGSLTKL-----DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
              +     L KL      L  C L EGAIP+D+  L SL+ L +S+N+   +PA    L
Sbjct: 190 TLRVRNCSKLHKLPDNLRSLQHCNLMEGAIPNDLWRLSSLEFLDVSENHIHRIPAGSIQL 249

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
            NL +L +  C  L+ + +LP ++  +  +GC  L TLL        S  +  F    + 
Sbjct: 250 SNLTELHMNHCLMLEEIHKLPSSLRVIEAHGCPCLETLLSDPTHLFWSYLLNCFKSQTEW 309

Query: 250 LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMN 308
           +            F E+        +I++PGS  IP+W   ++ G  + +  P       
Sbjct: 310 I------------FPEIR-------NIIIPGSSGIPEWVRDKSMGYEVRIAFPKSWYQDY 350

Query: 309 QVVGYA 314
             +G+A
Sbjct: 351 NFLGFA 356



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 17/123 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L L    I E+P SIE L+ L  L L  C+NLV LP++I +L  L TL +  C 
Sbjct: 138 MEHLYNLRLSGMVITELPSSIERLTNLADLELTNCENLVTLPNSIGNLTGLVTLRVRNCS 197

Query: 61  KFE------------NLLE-----TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
           K              NL+E      + ++ SLE LD+S   I   P+    + NL  L  
Sbjct: 198 KLHKLPDNLRSLQHCNLMEGAIPNDLWRLSSLEFLDVSENHIHRIPAGSIQLSNLTELHM 257

Query: 104 RGC 106
             C
Sbjct: 258 NHC 260


>gi|359486106|ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 16/207 (7%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  +  L  L+L+GC NL  LP +I  L+SL+ L+L  C +FE   E  G ++SL+EL 
Sbjct: 669 SVGNMKKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSLKELF 728

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-----INLMRRSSDLGALM 134
           +  TAI+  P+SI  +++LK L    C       S +  FP     +  ++  S +   +
Sbjct: 729 LRNTAIKDLPNSIGNLESLKILYLTDC-------SKFDKFPEKGGNMKSLKELSLINTAI 781

Query: 135 --LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
             LP S+  L SL  LDLSDC   E   P   GN+ SLK L+L K     LP SI  L +
Sbjct: 782 KDLPDSIGDLESLETLDLSDCSKFE-KFPEKGGNMKSLKELFLIKTAIKDLPNSIGDLGS 840

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           LE L L    R +  P+   N++ + V
Sbjct: 841 LEVLDLSYYSRFEKFPEKGGNMKSLEV 867



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 31/236 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLK-------- 52
           M+ L+EL L  T IK++P SI  L  L  L L  C    + P    ++KSLK        
Sbjct: 721 MKSLKELFLRNTAIKDLPNSIGNLESLKILYLTDCSKFDKFPEKGGNMKSLKELSLINTA 780

Query: 53  ---------------TLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                          TL+L  C KFE   E  G ++SL+EL +  TAI+  P+SI  + +
Sbjct: 781 IKDLPDSIGDLESLETLDLSDCSKFEKFPEKGGNMKSLKELFLIKTAIKDLPNSIGDLGS 840

Query: 98  LKTLS---FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCG 153
           L+ L    +      P          + +++ S+      LP S+  L SL  LDLSDC 
Sbjct: 841 LEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNSA---IKDLPDSIGDLESLETLDLSDCS 897

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
             E   P   GN+ SL+ L+L       LP SI  L +LE L L DC + +  P++
Sbjct: 898 RFE-KFPEKGGNMKSLENLFLINTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEM 952



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 156/350 (44%), Gaps = 54/350 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTL-----------KG----------CKN-- 37
            M+ L+EL L KT IK++P SI  L  L  L L           KG           KN  
Sbjct: 815  MKSLKELFLIKTAIKDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNSA 874

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
            +  LP +I  L+SL+TL+L  C +FE   E  G ++SLE L +  TAI+  P SI  +++
Sbjct: 875  IKDLPDSIGDLESLETLDLSDCSRFEKFPEKGGNMKSLENLFLINTAIKDLPDSIGDLES 934

Query: 98   LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCG 153
            L+ L    C+     P         + +NL R + +     + +LSGL +L    +++C 
Sbjct: 935  LEILDLSDCSKFEKFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSGLRNLI---IAECK 991

Query: 154  LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
                ++P +I  L  L+TL LS  + +      N L NL KL +  CK    + +LP ++
Sbjct: 992  -SLRSLPDNISRLKFLETLILSGCSDLWEGLISNQLCNLGKLNISQCKMAGQILELPSSL 1050

Query: 214  EKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK 273
            E++  + C S   L        SS   I  ++ LK   +  L    LR            
Sbjct: 1051 EEIDAHDCRSKEDL--------SSLLWICHLNWLKSTTEE-LKCWKLR------------ 1089

Query: 274  FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY-AACRVFHVP 322
             +I+   S  P+W  YQN G+ +T   P+        +G+  +C    +P
Sbjct: 1090 -AIIPENSGNPEWIRYQNLGTEVTTELPTNWYEDPDFLGFVVSCVCRSIP 1138



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 104/240 (43%), Gaps = 47/240 (19%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSL--------------------- 51
           ++K++P SI  L  L  L L  C    + P    ++KSL                     
Sbjct: 686 NLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSLKELFLRNTAIKDLPNSIGNLE 745

Query: 52  --KTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP 109
             K L L  C KF+   E  G ++SL+EL +  TAI+  P SI  +++L+TL    C   
Sbjct: 746 SLKILYLTDCSKFDKFPEKGGNMKSLKELSLINTAIKDLPDSIGDLESLETLDLSDC--- 802

Query: 110 PSSASCYLPFPINLMRRSSDLGALM-----------LP-SLSGLGSLTKLDLSDCGLGEG 157
               S +  FP     +  ++ +L            LP S+  LGSL  LDLS     E 
Sbjct: 803 ----SKFEKFP----EKGGNMKSLKELFLIKTAIKDLPNSIGDLGSLEVLDLSYYSRFE- 853

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             P   GN+ SL+ L L  +    LP SI  L +LE L L DC R +  P+   N++ + 
Sbjct: 854 KFPEKGGNMKSLEVLILKNSAIKDLPDSIGDLESLETLDLSDCSRFEKFPEKGGNMKSLE 913


>gi|297791267|ref|XP_002863518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309353|gb|EFH39777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1150

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 155/327 (47%), Gaps = 42/327 (12%)

Query: 21  IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDI 80
           ++ +  LV L L+GC +L  LP    +L SL TL L GC K   L E     E++E L +
Sbjct: 675 MKTMQSLVFLNLRGCTSLRCLPE--MNLSSLTTLILTGCLK---LREFRLISENIESLYL 729

Query: 81  SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG 140
            GTAI+  P+ +  ++ L  L+ + C        C        + +   L  L+L   S 
Sbjct: 730 DGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPEC--------IGKLKALQELILSGCSN 781

Query: 141 LGSLTKLD----------LSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNFV-TLPASINC 188
           L S   L+          L    + E   I S   +L  L+ L   +N+ + +L + I+ 
Sbjct: 782 LKSFPNLEDTMENFRVLLLDGTSIDEMPKIMSGSNSLSFLRRLSFRRNDVISSLGSDISQ 841

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---LGALKLRKSSCTIIDFVD 245
           L++L+ L L+ CK+L+SL  LPPN++ +  +GC SL T+   L  L   + + ++  F +
Sbjct: 842 LYHLKWLDLKYCKKLKSLSTLPPNIQCLDAHGCISLQTVTSPLAFLMPTEDTHSMFIFTN 901

Query: 246 SLKL--LGKNGLAISMLREFLEVVSAPSHKFSIVV--------PGSEIPKWFMYQNEGSS 295
             KL    KN +A  +LR+   ++S   H  S V         PG E+P WF +Q   S 
Sbjct: 902 CCKLNEAAKNDIASHILRK-CRLISDDHHNESFVFRALIGTCYPGYEVPPWFSHQAFSSV 960

Query: 296 ITVTRPSYLCNMNQVVGYAACRV--FH 320
           +    P + C+ N+ +G A C +  FH
Sbjct: 961 LEPKLPPHWCD-NKFLGLALCAIVSFH 986


>gi|15242334|ref|NP_199333.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007833|gb|AED95216.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1261

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 145/331 (43%), Gaps = 64/331 (19%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL LD T IKE+P +I  L  L+ L LK CKNL+ LP +I +LK+++ + L GC   E
Sbjct: 754  LEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSLE 813

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            +  E    ++ L+ L + GTAI+  P                                  
Sbjct: 814  SFPEVNQNLKHLKTLLLDGTAIKKIPD--------------------------------- 840

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                      +L  LS    LT    S+C L E   P  I  L S++ L LS N F  LP
Sbjct: 841  ----------ILHHLSPDQGLTS-SQSNCHLCEW--PRGIYGLSSVRRLSLSSNEFRILP 887

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL------LGALKLRKSS 237
             SI  L++L  L L+ CK L S+P LPPN++ +  +GC SL T+      L A      S
Sbjct: 888  RSIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCISLETISILSDPLLAETEHLHS 947

Query: 238  CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS----------IVVPGSEIPKWF 287
              I      L  + +N +  S  R+ ++++S    ++           I  PG ++P WF
Sbjct: 948  TFIFTNCTKLYKVEENSIE-SYPRKKIQLMSNALARYEKGLALDVLIGICFPGWQVPGWF 1006

Query: 288  MYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
             ++  G  +    P +  N   + G A C V
Sbjct: 1007 NHRTVGLELKQNLPRH-WNAGGLAGIALCAV 1036



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + E + E      +L+ LD++ ++     S +   + L++++  GC G  +     LP  
Sbjct: 650 QIEQIWEEEKDTSNLQWLDLNHSSKLHSLSGLSRAQKLQSINLEGCTGLKT-----LPQV 704

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKL-DLSDCGLGEGAIPSDIGNLH-------SLKTL 172
           +  M       +LM  +L G  SL  L D++  GL    I S+            +L+ L
Sbjct: 705 LQNME------SLMFLNLRGCTSLESLPDITLVGL-RTLILSNCSRFKEFKLIAKNLEEL 757

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASL 224
           YL       LP++I  L  L  LKL+DCK L SLP    N   ++++ ++GC+SL
Sbjct: 758 YLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSL 812


>gi|302125463|emb|CBI35550.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 40/321 (12%)

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           EG I + + +L  L+ L LS+N  V++PA I+ L NL+ L +  C++LQ +P+LPP+++ 
Sbjct: 2   EGTIDNKLCHLELLEVLNLSRNYMVSIPADISRLSNLKVLLVRQCEKLQKIPKLPPSIKL 61

Query: 216 VRVNGCASLVTL-----LGALKLRKSSCTI--IDFVDSLKLLGKNGLA---ISMLREFLE 265
               GC +L +L     + +L+ R  S  +  ++F+    L   +GL    ++M  E L 
Sbjct: 62  FDACGCTALRSLPTPSRMISLQHRLVSTWLRPVEFM----LWNCSGLYQDHVAMALETLH 117

Query: 266 VVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHS 325
               P   +SIV+PG  IPKW  ++N G+S++ T P +  + N  +G A C VF + +  
Sbjct: 118 RELFPEIGYSIVIPGRGIPKWPWHENMGASVSATLPPHWLD-NNFLGVALCAVFALEEGK 176

Query: 326 T-----GIRRFYRYPHPAHVLHCSMDEKFGHR--GSDHLWLLYLPR------QSYYCNVK 372
           T      IR  +      +  H       G R   +DH+ ++Y PR      +S Y +V 
Sbjct: 177 TIQRPGEIRCNFECREGPYFSHSITWTHSGDRVVETDHVCMMYQPRSQFVKSKSTYASVF 236

Query: 373 WHFESNHFRLSFMDEREKHCP-----AGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTR 427
            H +++ F LS      K C      A + +G K K   F P   + +E F  T     R
Sbjct: 237 KHIKAS-FSLSGASHEVKKCAIRLIYAPNTSGNKRK---FLPEIGNNMENFRITRFGDHR 292

Query: 428 FTSYNL--NEFH-HDFVGSNM 445
           +++ N    E H HD+   N 
Sbjct: 293 YSANNKCGRELHCHDWKSINF 313


>gi|297850940|ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339193|gb|EFH69610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 148/322 (45%), Gaps = 52/322 (16%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG----- 58
            L +L LD+T I+ +P  I  L  L +L L+ CK+L  LP +I  +  L +L L G     
Sbjct: 917  LLQLQLDRTPIETLPEEIGDLHFLHKLELRNCKSLKGLPESIKDMDQLHSLYLEGSNIEN 976

Query: 59   ------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
                              C K   L E+ G ++SL  L +  T++   P S   + NL+ 
Sbjct: 977  LPEDFGKLEKLVLLRMNNCKKLRGLPESFGDLKSLHRLFMQETSVTKLPESFGNLSNLRV 1036

Query: 101  LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAI 159
            L               L  P      S +   + LP S S L SL +LD     +  G I
Sbjct: 1037 LKM-------------LKKPFFRSSESEEPHFVELPNSFSNLSSLEELDARSWAIS-GKI 1082

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
            P D+  L S+K L L  N F +LP+S+  L NL+KL L DC+ L+ LP LP  +E++ + 
Sbjct: 1083 PDDLEKLTSMKILNLGNNYFHSLPSSLKGLSNLKKLSLYDCRELKCLPPLPWRLEQLILA 1142

Query: 220  GCASL--VTLLGALK----LRKSSC-TIIDF-----VDSLKLLGKNGLAISMLREFLEVV 267
             C SL  ++ L  LK    L  ++C  ++D      + +LK L  +G   +        +
Sbjct: 1143 NCFSLESISDLSNLKFLDELNLTNCEKVVDILGLEHLTALKRLYMSGCNSTCSLAVKRRL 1202

Query: 268  SAPSHK--FSIVVPGSEIPKWF 287
            S  S K  +++ +PG+ IP WF
Sbjct: 1203 SKASLKLLWNLSLPGNRIPDWF 1224



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 104/215 (48%), Gaps = 38/215 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL+ELLLD T I  +P SI  L  L +L+L GC+++  LP+                 
Sbjct: 773 MPCLKELLLDGTAISNLPDSIFCLQKLEKLSLMGCRSIQELPT----------------- 815

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                   VG++ SLEEL +  TA++  P SI  +KNL+ L F  C     ++   +P  
Sbjct: 816 -------CVGKLTSLEELYLDDTALQNLPDSIGNLKNLQKLHFMHC-----ASLSKIPDT 863

Query: 121 INLMRRSSDL---GALMLPSLSGLGSLTKLDLSDCGLGE----GAIPSDIGNLHSLKTLY 173
           IN ++   +L   G+ +       GSL   DLSD   G       +PS IG L+ L  L 
Sbjct: 864 INELKSLKELFLNGSAVEELPLNPGSLP--DLSDLSAGGCKFLKHVPSSIGGLNYLLQLQ 921

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           L +    TLP  I  L  L KL+L +CK L+ LP+
Sbjct: 922 LDRTPIETLPEEIGDLHFLHKLELRNCKSLKGLPE 956


>gi|154424270|gb|ABS82020.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 48/353 (13%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L+D + + ++P SI  L+ L +L L  C +LV+LPS+  ++ SLK LNL GC     +  
Sbjct: 711  LIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPS 770

Query: 68   TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMR 125
            ++G + +L+++   G +++   PSSI    NLK L    C+      S  L    +  + 
Sbjct: 771  SIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLN 830

Query: 126  RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
             S  L  + LPS+  + +L  L LSDC      +P  I N  +L TLYL   +N + LP+
Sbjct: 831  LSGCLSLVKLPSIGNVINLQSLYLSDCS-SLMELPFTIENATNLDTLYLDGCSNLLELPS 889

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGAL-------KLR 234
            SI  + NL+ L L  C  L+ LP L     N++ + +  C+SLV L  ++        L 
Sbjct: 890  SIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLD 949

Query: 235  KSSCT-----------------IID-------------FVDSLKLLGKNGLAISMLREFL 264
             S+C+                 I+D             F  + K++        + +E  
Sbjct: 950  VSNCSSLLELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVLNFANCFKLNQEAR 1009

Query: 265  EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAAC 316
            +++   S   + ++PG ++P +F Y+  G S+TV     YL    Q + + AC
Sbjct: 1010 DLIIQTSACRNAILPGEKVPAYFTYRATGDSLTVKLNQKYLL---QSLRFKAC 1059



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 29/211 (13%)

Query: 22  ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD-I 80
           E +  L  + L  C NL  LP + ++  +L+ L L+ C     L  ++G   +L ELD I
Sbjct: 654 EPIRNLKWMDLSFCVNLKELP-DFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLI 712

Query: 81  SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG 140
             +++   PSSI  + NLK L    C     S+   LP                  S   
Sbjct: 713 DCSSLVKLPSSIGNLTNLKKLFLNRC-----SSLVKLP-----------------SSFGN 750

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLED 199
           + SL +L+LS C      IPS IGN+ +LK +Y    ++ V LP+SI    NL++L L +
Sbjct: 751 VTSLKELNLSGCS-SLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLN 809

Query: 200 CKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           C  L   P    N   +E + ++GC SLV L
Sbjct: 810 CSSLMECPSSMLNLTRLEDLNLSGCLSLVKL 840


>gi|297790638|ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309038|gb|EFH39463.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 916

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 49/305 (16%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+ L LK C  L  LP  +  LKSL+TL + GC K E L   +  ++SL  L  + TAI 
Sbjct: 600 LILLNLKDCTKLGDLPLELYMLKSLETLIVSGCVKLERLDNALRDMKSLTTLKANYTAIT 659

Query: 87  CPPSSIFLMKNLKTLSFRGC-----------NGPPSSASCYLPFPINLMRRSSDLGALML 135
             P   ++   L+ LS  GC           +     A+  L FP+N+            
Sbjct: 660 QIP---YMSNQLEELSLDGCKELWKVRDNTHSDESPQATLSLLFPLNV------------ 704

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
                +  L  L L  C L +  +P ++G+L  L+ L L  NNF  L      L +L+ L
Sbjct: 705 -----ISCLKTLRLGSCNLSDELVPKNLGSLSCLEELDLQGNNFRNLQMDFAGLSSLQIL 759

Query: 196 KLEDCKRLQSLPQLPPNVEKVRVNGCASL--------VTLLGALKLRKSSC-TIIDF--V 244
           K++ C  LQS+  LP  +     + C  L         ++L +L L  ++C  +++   +
Sbjct: 760 KVDSCSELQSMFSLPKRLRSFYASNCIMLERTPDLSECSVLQSLHL--TNCFNLVETPGL 817

Query: 245 DSLKLLGKNGLAI-----SMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
           D LK +G   + +     +  RE +    A      I +PGS +P W  ++NE  SI+ T
Sbjct: 818 DKLKTVGVIHMEMCNRISTDYRESIMQGWAVGANGGIFIPGSSVPNWVSFKNERHSISFT 877

Query: 300 RPSYL 304
            P  L
Sbjct: 878 VPESL 882


>gi|449482307|ref|XP_004156243.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1857

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 115/216 (53%), Gaps = 23/216 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M  L EL +D T I ++  SI  L GLV L L+ C  L  LP+ I  L SLKTL L GC 
Sbjct: 1298 MGYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCK 1357

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              + +   +  V+ LEELDI GT+I    S+I  ++NL+ L+   C    S         
Sbjct: 1358 NLDKIPPCLRYVKHLEELDIGGTSI----STIPFLENLRILN---CERLKS--------- 1401

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             N+    + L A  L SL+       L+LSDC L +  IP+D+    SL+ L LS N+F 
Sbjct: 1402 -NIWHSLAGLAAQYLRSLN------DLNLSDCNLVDEDIPNDLELFSSLEILDLSSNHFE 1454

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
             L  SI  L NL+ L L DC +L+ +P+LP +++ V
Sbjct: 1455 RLSESIKQLINLKVLYLNDCNKLKQVPKLPKSIKYV 1490


>gi|224145367|ref|XP_002325616.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862491|gb|EEE99997.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 889

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 193/445 (43%), Gaps = 47/445 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +ECLR  L D   + E+P S++ L  L ++ L  C NL   P  +   K L  L++  C 
Sbjct: 471 LECLR--LKDCPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFP--MLDSKVLSFLSISRCL 526

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +      + Q  +L  L +  T+I+  P S+    NL+ L+  GC       S    FP
Sbjct: 527 -YVTTCPMISQ--NLVWLRLEQTSIKEVPQSV--TGNLQLLNLDGC-------SKMTKFP 574

Query: 121 INLMRRSSDLGALML---------PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
            NL     D+  L L          S+  L  L  L++S C   E + P    ++ SL+ 
Sbjct: 575 ENL----EDIEELNLRGTAIKEVPSSIQFLTRLRHLNMSGCSKLE-SFPEITVHMKSLEH 629

Query: 172 LYLSKNNFVTLP-ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA 230
           L LSK     +P  S   + +L  L L D   +++LP+LPP++  +  + CASL T+   
Sbjct: 630 LILSKTGIKEIPLISFKHMISLISLDL-DGTPIKALPELPPSLRYLNTHDCASLETVTST 688

Query: 231 LKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
           + + +    + DF +  KL  +  L  +M  +       P     +V+PGSEIP+WF  +
Sbjct: 689 INIGRLRLGL-DFTNCFKL-DQKPLVAAMHLKIQSGEEIPDGSIQMVLPGSEIPEWFGDK 746

Query: 291 NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFG 350
             GSS+T+  PS  C+  Q+ G A C VF  P  S G      Y        C +  + G
Sbjct: 747 GIGSSLTIQLPSN-CH-QQLKGIAFCLVFLAPLPSHGFSFSDVY------FDCHVKSENG 798

Query: 351 HRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPG 410
               D   +L   ++S   +     +S+H  L +  E   H    SG  +  K   F+ G
Sbjct: 799 ENDGDDEVVLA-SQKSLLSHYLRTCDSDHMILLYKLELVDHLRKYSGNEVTFK---FYRG 854

Query: 411 YMHEVEEFDETT-KQWTRFTSYNLN 434
            M + E       K W  +  ++ N
Sbjct: 855 RMEDHESRRPVELKSWGVYLHFDEN 879


>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
          Length = 1224

 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 184/435 (42%), Gaps = 64/435 (14%)

Query: 12   TDIKEMPLS-----IEL----LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            T++KE+ L+     +EL    ++ L  L    C +LV + S+I ++ +L  L+L GC   
Sbjct: 809  TNLKELELNECSSLVELTFGNMTNLKNLDPNRCSSLVEISSSIGNMTNLVRLDLTGCSSL 868

Query: 63   ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G + +LE L++SG +++   PSSI  + NLK L+ R C       S  +  P+
Sbjct: 869  VELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNC-------STLMALPV 921

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG-EGA----IPSDIGNLHSLKTL---- 172
            N+  +S D   L L   S L S  ++  +   LG +G     IP+ I +   L TL    
Sbjct: 922  NINMKSLDF--LDLSYCSVLKSFPEISTNIIFLGIKGTAIEEIPTSIRSWSRLDTLDMSY 979

Query: 173  -----------------YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
                             +LS      +   +  +  L +L +  C +L SLPQLP ++E 
Sbjct: 980  SENLRKSHHAFDLITNLHLSDTGIQEISPWVKEMSRLRELVINGCTKLVSLPQLPDSLEF 1039

Query: 216  VRVNGCASLVTLLG-ALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF 274
            + V  C SL  L        ++  T + FV+ LKL           RE ++++   S K 
Sbjct: 1040 MHVENCESLERLDSLDCSFYRTKLTDLRFVNCLKL----------NREAVDLILKTSTKI 1089

Query: 275  SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
              + PG  +P +F Y+  GSS+++    +       + + AC +            +YR 
Sbjct: 1090 WAIFPGESVPAYFSYRATGSSVSMKLNRFDTRFPTSLRFKACILLVTNPDDVEPAAWYR- 1148

Query: 335  PHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPA 394
               ++ ++  + +        H+W    PR  +   +++        L F    EK    
Sbjct: 1149 SDMSYCINGKLRDAGVFLAYTHIWDPLRPRSEHLVVIEFEETVTSPELVFEFRFEKE--- 1205

Query: 395  GSGTGLKVKRCGFHP 409
                  ++K CG  P
Sbjct: 1206 ----NWEIKECGLRP 1216



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 126/243 (51%), Gaps = 22/243 (9%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++KE+P ++   + L +L L GC +L+ LPS+I +L +LK LNL  C     L  ++G +
Sbjct: 702 NLKELP-NLSTATNLRELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNM 760

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
            +LE L++SG +++   PSSI  M NL+  +   C     S+   L F I  M    +L 
Sbjct: 761 TNLENLNLSGCSSLVELPSSISNMTNLENFNLSQC-----SSVVRLSFSIGNMTNLKELE 815

Query: 131 ----GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
                +L+  +   + +L  LD + C      I S IGN+ +L  L L+  ++ V LP S
Sbjct: 816 LNECSSLVELTFGNMTNLKNLDPNRCS-SLVEISSSIGNMTNLVRLDLTGCSSLVELPYS 874

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
           I  + NLE L+L  C  L  LP       N++++ +  C++L+ L   + ++      +D
Sbjct: 875 IGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNCSTLMALPVNINMKS-----LD 929

Query: 243 FVD 245
           F+D
Sbjct: 930 FLD 932



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 8/209 (3%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LREL L   + + E+P SI  L+ L +L LK C +L+ LPS+I ++ +L+ LNL GC   
Sbjct: 715 LRELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSL 774

Query: 63  ENLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             L  ++  + +LE  ++S   + +R    SI  M NLK L    C+         +   
Sbjct: 775 VELPSSISNMTNLENFNLSQCSSVVRL-SFSIGNMTNLKELELNECSSLVELTFGNMTNL 833

Query: 121 INLM-RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NN 178
            NL   R S L  +   S+  + +L +LDL+ C      +P  IGN+ +L+TL LS  ++
Sbjct: 834 KNLDPNRCSSLVEIS-SSIGNMTNLVRLDLTGCS-SLVELPYSIGNMTNLETLELSGCSS 891

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            V LP+SI  L NL++L L +C  L +LP
Sbjct: 892 LVELPSSIGNLHNLKRLNLRNCSTLMALP 920


>gi|356497814|ref|XP_003517752.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 115/232 (49%), Gaps = 17/232 (7%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           LS LV L L+ C NLV LPS+++ +K L+ L L  C+K + L + +  +  L +L I  T
Sbjct: 719 LSSLVHLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNT 778

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL-MLP-SLSGL 141
           A+   P SIF +  L+ LS  GCN      +C      +L   S +  AL  LP S+  L
Sbjct: 779 AVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKL-CSLQELSLNHTALEELPYSVGSL 837

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
             L KL L  C      IP+ IGNL SL  L+L  +    LPASI  L  L KL +  C 
Sbjct: 838 EKLEKLSLVGCK-SLSVIPNSIGNLISLAQLFLDISGIKELPASIGSLSYLRKLSVGGCT 896

Query: 202 RLQSLPQLPPNVEKVRVNGCASLVTL-LGALKLRKSSCTIIDFVDSLKLLGK 252
            L  LP        V +    S+V L L   K+     T+ D +D++++L K
Sbjct: 897 SLDKLP--------VSIEALVSIVELQLDGTKI----TTLPDQIDAMQMLEK 936



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 35/236 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPS----------------- 43
           M CLR+LL+D T + E+P SI  L+ L  L+  GC +L RLP+                 
Sbjct: 767 MICLRQLLIDNTAVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTA 826

Query: 44  ------NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                 ++ SL+ L+ L+L+GC     +  ++G + SL +L +  + I+  P+SI  +  
Sbjct: 827 LEELPYSVGSLEKLEKLSLVGCKSLSVIPNSIGNLISLAQLFLDISGIKELPASIGSLSY 886

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-----GALMLP-SLSGLGSLTKLDLSD 151
           L+ LS  GC          LP  I  +    +L         LP  +  +  L KL++ +
Sbjct: 887 LRKLSVGGCTSLDK-----LPVSIEALVSIVELQLDGTKITTLPDQIDAMQMLEKLEMKN 941

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           C      +P   G L +L +L L + N   LP SI  L NL +L+L+ CK+LQ LP
Sbjct: 942 CE-NLRFLPVSFGCLSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLP 996



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 142/306 (46%), Gaps = 50/306 (16%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L  L L +T+I E+P SI +L  L++L L  CK L RLP +  +LKSL+ L +    
Sbjct: 955  LSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQMKET- 1013

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               +L ++ G + SL +LD+                  + L   G  G            
Sbjct: 1014 TLTHLPDSFGMLTSLVKLDME-----------------RRLYLNGATG------------ 1044

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            + +  +       +L S   L  L +L+    G+  G IP D   L SL+TL L  NN  
Sbjct: 1045 VIIPNKQEPNSKAILRSFCNLTLLEELNAHGWGMC-GKIPDDFEKLSSLETLSLGHNNIF 1103

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL------LGALKLR 234
            +LPAS+  L  L+KL L DC+ L  LP LP ++E++ +  C ++  +          +L 
Sbjct: 1104 SLPASMIGLSYLKKLLLSDCRELIFLPPLPSSLEELNLANCIAVQYMHDISNLKLLEELN 1163

Query: 235  KSSC-TIIDF-----VDSLKLLGKN---GLAISMLREFLEVVSAPSHKFSI-VVPGSEIP 284
             ++C  ++D      + SL+ L  N   G + ++ R F +V+     K  I ++PGS +P
Sbjct: 1164 LTNCEKVVDIPGLEHLKSLRRLYMNGCIGCSHAVKRRFTKVL---LKKLEILIMPGSRVP 1220

Query: 285  KWFMYQ 290
             WF  +
Sbjct: 1221 DWFTAE 1226


>gi|297794871|ref|XP_002865320.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297311155|gb|EFH41579.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1156

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 188/444 (42%), Gaps = 80/444 (18%)

Query: 26   GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL------------------LE 67
             L +L L+GC +L++LP  + +++SL  LN+ GC     L                  LE
Sbjct: 729  NLERLNLEGCTSLLKLPKEMENMESLVFLNMRGCKSLTFLHRMNLSSLTILILSDCSKLE 788

Query: 68   TVGQV-ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
                + E+LE L + GTAI+  P ++  +K L  L+ +GC    S   C        + +
Sbjct: 789  EFEVISENLEALYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPEC--------LGK 840

Query: 127  SSDLGALMLPSLSGLGSLTK----LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVT 181
               L  L+L + S L S+ K    +      L +G    DI  ++SL+ L LS+N   + 
Sbjct: 841  QKALEELILSNCSKLESVPKAVKNMKKLRILLLDGTRIKDIPKINSLERLSLSRNIAMIH 900

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---------LGALK 232
            L  S++   NL+ + +++C+ L+ LP LP ++E + V GC  L T+            ++
Sbjct: 901  LQDSLSGFSNLKCVVMKNCENLRYLPSLPRSLEYLNVYGCERLETVENPLVFRGFFNVIQ 960

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREF-----------LEVVSAPSHKFSIVVPGS 281
            L K   T + F +   L      +IS   ++           L +VS     F+   PG 
Sbjct: 961  LEKIRSTFL-FTNCNNLFQDAKESISSYAKWKCHRLALDCYQLGIVSGAF--FNTCYPGF 1017

Query: 282  EIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI---------RRFY 332
             +P WF YQ  GS       S+ CN N + G A C V    ++   I          +F 
Sbjct: 1018 IVPSWFHYQAVGSVFEPRLKSHWCN-NMLYGIALCAVVSFHENQDPIIDSFSVKCTLQFE 1076

Query: 333  RYPHPAHVLHCSMDE--KFGHRGSDHLWLLYLP---RQSYYCNVKWHFESNHFRLSFMDE 387
                      C +    K G  G+DH+++ Y+P    + YY    +H    + ++ F   
Sbjct: 1077 NEDGSRIRFDCDIGSLTKPGRIGADHVFIGYVPCSRLKDYYSIPIYH--PTYVKVEF--- 1131

Query: 388  REKHCPAGSGTGLKVKRCGFHPGY 411
               + P G  +  +V  CGF   Y
Sbjct: 1132 ---YLPDGCKS--EVVDCGFRLMY 1150


>gi|449447729|ref|XP_004141620.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 838

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 114/216 (52%), Gaps = 23/216 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL +D T I ++  SI  L GLV L L+ C  L  LP+ I  L SLKTL L GC 
Sbjct: 489 MGYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCK 548

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             + +   +  V+ LEELDI GT+I    S+I  ++NL+ L+   C    S         
Sbjct: 549 NLDKIPPCLRYVKHLEELDIGGTSI----STIPFLENLRILN---CERLKS--------- 592

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            N+    + L A        L SL  L+LSDC L +  IP+D+    SL+ L LS N+F 
Sbjct: 593 -NIWHSLAGLAA------QYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDLSSNHFE 645

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            L  SI  L NL+ L L DC +L+ +P+LP +++ V
Sbjct: 646 RLSESIKQLINLKVLYLNDCNKLKQVPKLPKSIKYV 681


>gi|359493390|ref|XP_003634584.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1067

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 176/480 (36%), Gaps = 125/480 (26%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE------SLEE 77
            L  L  L   GC+NL  LP +I ++ SLKTL +  C K E +LE    V+      S   
Sbjct: 573  LKALESLDFSGCRNLESLPVSIYNVSSLKTLGITNCPKLEEMLEMKLGVDPCPWPFSPLT 632

Query: 78   LDISGTAI------------------RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
              IS +AI                  +CP SS+  +   K          P  +S     
Sbjct: 633  CHISNSAIIWDDHWHDCFSSLEALDSQCPLSSLVELSVRKFYDME--EDIPIGSSHLTSL 690

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH------------ 167
             I  +     +   +L  +  L SL KL L+ C   E  IP DI NL             
Sbjct: 691  EILSLGNVPTVVEGILYDIFHLSSLVKLSLTKCKPTEEGIPRDIQNLSPLQQLSLHDCNL 750

Query: 168  -------------SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
                         SL+ LYL  N+F ++PA I+ L NL+ L L  CK+LQ +P+LP ++ 
Sbjct: 751  MKGTILDHICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPELPSSLR 810

Query: 215  KV------RVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVS 268
             +      R++    L+ +   +   KS       ++       NG+             
Sbjct: 811  FLDAHCPDRISSSPLLLPIHSMVNCFKSKIEGRKVINRYSSFYGNGIG------------ 858

Query: 269  APSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI 328
                   IV+P S I +W  Y+N G  +T+  P      + + G+A C V+  P   +  
Sbjct: 859  -------IVIPSSGILEWITYRNMGRQVTIELPPNWYKNDDLWGFALCCVYVAPACKSED 911

Query: 329  RRFYR----------YPHPAHVLHCSM-------DEKFGH----------RGSDHLWLLY 361
               Y                   +C +        E  GH            SD  W++ 
Sbjct: 912  ESQYESGLISEDDSDLKDEEASFYCELTIEGNNQSEDVGHFFLHSRCIKDDVSDMQWVIC 971

Query: 362  LPR----QSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEE 417
             P+    +SY+ N +W     HF+ SF              G +V+ CG    Y  + E+
Sbjct: 972  YPKLAIEKSYHTN-QW----THFKASF-------------GGAQVEECGIRLVYRKDYEQ 1013


>gi|359486120|ref|XP_003633392.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1218

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 34/245 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSN---------------- 44
            M+ L+ L L KT I+E+P SI+L S  + L L  C    + P N                
Sbjct: 890  MKSLKFLYLRKTAIRELPSSIDLESVEI-LDLSDCSKFEKFPENGANMKSLYDLSLENTV 948

Query: 45   -------INSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                   I + +SL+TL+L  C KFE   E  G ++SL++L  +GTAI+  P SI  +++
Sbjct: 949  IKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLES 1008

Query: 98   LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDC 152
            LK L    C+     P    +    + +NL     +     LP S+  L SL  LDLS C
Sbjct: 1009 LKILDLSYCSKFEKFPEKGGNMKSLWKLNL----KNTAIKDLPDSIGDLESLVSLDLSKC 1064

Query: 153  GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
               E   P   GN+ SLK LYL+      LP SI  L +LE L L  C + +  P+   N
Sbjct: 1065 SKFE-KFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDLSKCSKFEKFPKKGGN 1123

Query: 213  VEKVR 217
            ++ ++
Sbjct: 1124 MKSLK 1128



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 115/248 (46%), Gaps = 39/248 (15%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-------------KNLVRL------ 41
            M+ L +L L+ T IKE+P  I     L  L L  C             K+L +L      
Sbjct: 936  MKSLYDLSLENTVIKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTA 995

Query: 42   ----PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                P +I  L+SLK L+L  C KFE   E  G ++SL +L++  TAI+  P SI  +++
Sbjct: 996  IKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSIGDLES 1055

Query: 98   LKTLSFRGCNGPPSSASCYLPFP-----INLMRRS--SDLGALMLP-SLSGLGSLTKLDL 149
            L +L    C       S +  FP     +  ++R   ++     LP S+  L SL  LDL
Sbjct: 1056 LVSLDLSKC-------SKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDL 1108

Query: 150  SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
            S C   E   P   GN+ SLK LY+       LP SI  L +L+ L L  C + +  P+ 
Sbjct: 1109 SKCSKFE-KFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKILDLSYCSKFEKFPEK 1167

Query: 210  PPNVEKVR 217
              N++ ++
Sbjct: 1168 GGNMKSLK 1175



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 17/205 (8%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+ +L     L L  C  L  LPS+I++L++L+ L L  C  F+   E  G ++SL+ L 
Sbjct: 838  SVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLYLTRCSSFDKFSEIQGNMKSLKFLY 897

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN--LMRRSSDLG-----A 132
            +  TAIR  PSSI L ++++ L    C       S +  FP N   M+   DL       
Sbjct: 898  LRKTAIRELPSSIDL-ESVEILDLSDC-------SKFEKFPENGANMKSLYDLSLENTVI 949

Query: 133  LMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
              LP+ ++   SL  LDLS C L     P   GN+ SLK L  +      LP SI  L +
Sbjct: 950  KELPTGIANWESLQTLDLSSC-LKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLES 1008

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKV 216
            L+ L L  C + +  P+   N++ +
Sbjct: 1009 LKILDLSYCSKFEKFPEKGGNMKSL 1033



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 99/224 (44%), Gaps = 47/224 (20%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
            M+ L++L  + T IK++P SI  L  L  L L  C    +                    
Sbjct: 983  MKSLKKLCFNGTAIKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTA 1042

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LP +I  L+SL +L+L  C KFE   E  G ++SL+ L ++ TAI+  P SI  +++
Sbjct: 1043 IKDLPDSIGDLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLES 1102

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM-----------LP-SLSGLGSLT 145
            L+ L    C       S +  FP    ++  ++ +L            LP S+  L SL 
Sbjct: 1103 LEILDLSKC-------SKFEKFP----KKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLK 1151

Query: 146  KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
             LDLS C   E   P   GN+ SLK LYL       LP SI  L
Sbjct: 1152 ILDLSYCSKFE-KFPEKGGNMKSLKQLYLINTAIKDLPDSIGDL 1194



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 20/232 (8%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL L  ++IK++    + L  L  + L     LV++P   +S+ +L+ L L GC  
Sbjct: 773 ENLVELHLKCSNIKQLWQGKKDLESLKVIDLSHSNKLVQMPE-FSSMPNLEELILKGCVS 831

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             ++  +VG ++    L+++    ++  PSSI  ++ L+ L    C    SS   +    
Sbjct: 832 LIDIHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLYLTRC----SSFDKFSEIQ 887

Query: 121 INL-------MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            N+       +R+++      LPS   L S+  LDLSDC   E   P +  N+ SL  L 
Sbjct: 888 GNMKSLKFLYLRKTA---IRELPSSIDLESVEILDLSDCSKFE-KFPENGANMKSLYDLS 943

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCA 222
           L       LP  I    +L+ L L  C + +  P+   N++ ++    NG A
Sbjct: 944 LENTVIKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTA 995


>gi|449482303|ref|XP_004156242.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1633

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 117/225 (52%), Gaps = 14/225 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L LD ++I     SI  L+GLV L L  C  L  LP  I +LKSLKTL L  C 
Sbjct: 726 MEHLTHLHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSLKTLLLKYCK 785

Query: 61  KFENLLETVGQVESLEELDISGTAI-RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K + +  ++   ESLE L IS T+I   PPS I  +KNLKTL    C G        L  
Sbjct: 786 KLDKIPPSLANAESLETLSISETSITHVPPSIIHCLKNLKTLD---CEGLSHGIWKSLLP 842

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
             N+ +  +          +GLG L  L+L  C L +  IP D+    SL+TL LS NNF
Sbjct: 843 QFNINQTIT----------TGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNF 892

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            TLP S++ L  L+ L L  C  L+ LP+LP +++ V    C S+
Sbjct: 893 TTLPDSLSHLKKLKTLNLNCCTELKDLPKLPESLQYVGGIDCRSM 937



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 31/174 (17%)

Query: 273  KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
            KF +++ G +IPK+F  Q++G+   +  P YL    + +G A C +  V K    +    
Sbjct: 1456 KFDLLLHGDKIPKFFSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEII 1515

Query: 333  ----RYPH----------------PAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVK 372
                RY                  P H    S  +      S  LWL Y+P   +  N+ 
Sbjct: 1516 PERERYTKVVDLICKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGF--NIN 1573

Query: 373  WHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWT 426
            WH+    F ++     E  C    G    VK CG H  + HE    D+   + T
Sbjct: 1574 WHY-CTQFEIAL----ETSCDELFG----VKNCGLHLIHKHERMMIDKMVMEST 1618



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 90/220 (40%), Gaps = 30/220 (13%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            L +L L  C  L  +  +INSL  L  L+L GC   ++    + + ++L+ L +SGT +
Sbjct: 659 NLERLVLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANI-RCKNLQTLKLSGTGL 717

Query: 86  RCPPSSIFLMKNLKTLSFRGCN----GPPSSASCYLPFPINLMRRSS-----DLGALMLP 136
              P  I  M++L  L   G N     P       L F              ++G L   
Sbjct: 718 EIFP-EIGHMEHLTHLHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSL 776

Query: 137 SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS-INCLFNLEKL 195
               L    KLD          IP  + N  SL+TL +S+ +   +P S I+CL NL+ L
Sbjct: 777 KTLLLKYCKKLD---------KIPPSLANAESLETLSISETSITHVPPSIIHCLKNLKTL 827

Query: 196 KLEDCKRLQS------LPQLPPNVEKVRVNGCASLVTLLG 229
              DC+ L        LPQ   N       GC   + L+G
Sbjct: 828 ---DCEGLSHGIWKSLLPQFNINQTITTGLGCLKALNLMG 864


>gi|342365826|gb|AEL30360.1| TIR-NBS-LRR-TIR type disease resistance protein [Arachis hypogaea]
          Length = 849

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 194/468 (41%), Gaps = 100/468 (21%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L E+ L K+ I E+    ++L  L  L L  CK L + P +++   +LK LNL GC + +
Sbjct: 418 LVEINLSKSQIAELWDGKKVLENLEHLYLSWCKQLKQTP-DLSGAPNLKKLNLRGCEELD 476

Query: 64  NL--------------------LETVG---QVESLEELDI-SGTAIRCPPSSIFLMKNLK 99
            +                    LET+G   ++ SLE+LD+ S +++R  P     MK L 
Sbjct: 477 YIHPSLAHHKRLVELNLEDCKRLETLGDKLEMSSLEKLDLDSCSSLRRLPEFGECMKKLS 536

Query: 100 TLSFRGCNG---PPSSASCYLPFPINLMRRSSDLGALM---------------LPSLS-G 140
            L+ R       PP+  +      +NL       G L+               LP  + G
Sbjct: 537 ILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKKLVLRALPQKTDG 596

Query: 141 LGSLT----KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
           L SLT      D       E  +  DI +L SL  L LS+N F+ +P SI+ L  L  LK
Sbjct: 597 LESLTVRADYDDSDSSSREESTLSYDIAHLASLTYLDLSRNRFLRVPISIHQLPRLTHLK 656

Query: 197 LEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLA 256
           L  C  L+ LP+LP ++ ++   GC SL              + +D V S    G     
Sbjct: 657 LSFCDELEVLPELPSSLRELDAQGCYSL------------DKSYVDDVISKTCCG----- 699

Query: 257 ISMLREFLEVVSAPSHKF-SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAA 315
                 F E  S     F  +++ G EIP WF +Q E   ++V+ P   C   ++V  A 
Sbjct: 700 ------FAESASQDREDFLQMMITGEEIPAWFEHQEEDEGVSVSFPLN-CPSTEMVALAL 752

Query: 316 CRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLW-----LLYLPRQSYYCN 370
           C +F+      GI        P+ +  C+  E      S + W     LL++   + Y  
Sbjct: 753 CFLFN------GIEGL----QPSVI--CNGKEFIN--ASFYWWSSLYNLLFIVCVNGYYF 798

Query: 371 VKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEF 418
            K     N F++ F        P     G++V+RCG    Y  ++++F
Sbjct: 799 SKLLCHHNRFQMLF--------PYADHLGIRVQRCGARWVYKQDIQDF 838


>gi|359493388|ref|XP_003634583.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1196

 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 179/456 (39%), Gaps = 111/456 (24%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE---SLEELDI 80
            L  L  L    C+NL  LP +I +L SLKTL +  C K E +LE    V+   S     I
Sbjct: 751  LKALELLDFSHCRNLESLPVSIYNLSSLKTLGITNCPKLEEMLEIKLGVDWPFSPLTCHI 810

Query: 81   SGTAI------------------RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP---- 118
            S +AI                  +CP SS+     L    F G      S S +L     
Sbjct: 811  SNSAITWYDDWHDCFSSLEALNPQCPLSSLV---ELSVRKFYGMEEDILSGSFHLSSLQI 867

Query: 119  -----FPI---NLMRRSSDLGALMLPSLS--------------GLGSLTKLDLSDCGLGE 156
                 FP     ++ +   L +L+  SL+               L  L +L L DC L E
Sbjct: 868  LSLGNFPSVAEGILDKIFHLSSLVKLSLTKCKPTEEGIPGDIWNLSPLQQLSLRDCNLME 927

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            G I + I +L SL+ LYL  N+F ++PA I+ L NL+ L L  CK LQ +P+LP ++  +
Sbjct: 928  GKILNHICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFL 987

Query: 217  R------VNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAP 270
                   ++   SL+ +   +   KS       ++       NG+ I + R         
Sbjct: 988  DAHCSDGISSSPSLLPIHSMVNCFKSEIEDRKVINHYSYFWGNGIGIVIPR--------- 1038

Query: 271  SHKFSIVVPGSEIPKWFMYQNEG-SSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIR 329
                      S I +W  Y+N G + +TV  P      + + G+A C V+  P       
Sbjct: 1039 ---------SSGILEWITYRNMGRNEVTVELPPNWYKNDDLWGFALCCVYVAPA------ 1083

Query: 330  RFYRYPHPAHVLHCSMD----EKFGHRGSDHLWLLYLPR----QSYYCNVKWHFESNHFR 381
                Y     + H S D    E  G       W++  P+    +SY+ N +W     HF+
Sbjct: 1084 ----YESQYELGHISKDDAELEDEGPGFCYMQWVICYPKLAIEESYHTN-QW----THFK 1134

Query: 382  LSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEE 417
             SF              G +V+ CG    Y  + E+
Sbjct: 1135 ASF-------------GGAQVEECGIRLVYTEDYEQ 1157



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 79/156 (50%), Gaps = 28/156 (17%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK---FENLLETVGQVESLEELDI 80
           L+GL +L L  CKNL+ LP +I SL SL+TL+L+ C K   F N+   +G +++LE LD+
Sbjct: 653 LNGLEELDLSNCKNLLSLPDSIGSLNSLQTLDLVECSKLVGFTNI--NIGSLKALEYLDL 710

Query: 81  SG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           S    +   P+SI  + +L+TL   GC                     S L      +  
Sbjct: 711 SWCENLESLPNSIGSLSSLQTLLLIGC---------------------SKLKGFPDINFG 749

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            L +L  LD S C   E ++P  I NL SLKTL ++
Sbjct: 750 SLKALELLDFSHCRNLE-SLPVSIYNLSSLKTLGIT 784



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 9/174 (5%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LPSN + +++   LNL      E+L E     + L+  D+S +      S+I  M+N
Sbjct: 580 LEYLPSNFH-VENPVELNLWYS-NIEHLWEGNMPAKKLKVTDLSYSRHLVDISNISSMQN 637

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
           L+TL  +GC       +      +  +  S+    L LP S+  L SL  LDL +C    
Sbjct: 638 LETLILKGCTRLLKHLN-----GLEELDLSNCKNLLSLPDSIGSLNSLQTLDLVECSKLV 692

Query: 157 GAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           G    +IG+L +L+ L LS   N  +LP SI  L +L+ L L  C +L+  P +
Sbjct: 693 GFTNINIGSLKALEYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDI 746


>gi|357516577|ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1406

 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 199/468 (42%), Gaps = 85/468 (18%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            LR LL+ K  + ++P S + L+ +++L L G   +  LP  I  LK L+ L +  C   E
Sbjct: 861  LRTLLVRKCKLSKLPDSFKTLASIIELDLDGTY-IRYLPDQIGELKQLRKLEIGNCSNLE 919

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPS-------- 111
            +L E++G + SL  L+I    IR  P SI L++NL  L+   C      P S        
Sbjct: 920  SLPESIGYLTSLNTLNIINGNIRELPVSIGLLENLVNLTLSRCRMLKQLPASIGNLKSLC 979

Query: 112  ------SASCYLPFPINLMRRSSDL----------------GALMLP-SLSGLGSLTKLD 148
                  +A   LP    ++     L                G+ +LP S   L  L +LD
Sbjct: 980  HLKMEETAMVDLPESFGMLSSLRTLRMAKRPHLVPISVKNTGSFVLPPSFCNLTLLHELD 1039

Query: 149  LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
                 L  G IP D   L  L+TL L +NNF +LP+S+  L  L++L L +C  L SLP 
Sbjct: 1040 ARAWRLS-GKIPDDFEKLSLLETLKLDQNNFHSLPSSLKGLSILKELSLPNCTELISLPL 1098

Query: 209  LPPNVEKVRVNGCASLVTL------LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE 262
            LP ++ K+  + C +L T+          +L  ++C  +  +  L+ L       S+ R 
Sbjct: 1099 LPSSLIKLNASNCYALETIHDMSSLESLEELELTNCEKVADIPGLECLK------SLKRL 1152

Query: 263  FLEVVSAPSHKF-------------SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQ 309
            +L   +A S K              ++ +PG+++P+WF    E  S +  +   L ++  
Sbjct: 1153 YLSGCNACSSKVCKRLSKVALRNFENLSMPGTKLPEWF--SGETVSFSNRKNLELTSVVV 1210

Query: 310  VVGYAACRVFHVPKHSTGIRRFYRYPHPAHV-----LHCSMDEKFGHRGSDHLWLLYLPR 364
             V  +     H+P          R   P  +     +     +KFG      L +  +PR
Sbjct: 1211 GVVVSINHNIHIP--------IKREEMPGIIDVEGKVFKHGKQKFG----TTLNIRGVPR 1258

Query: 365  QSYYCNVKWHFESNHFRLSFMDEREKHCPAGSG----TGLKVKRCGFH 408
             +        F++ H  ++F+ + +  C          GL++K+CG +
Sbjct: 1259 TNVDHIHLCRFQNYHQLVAFLKDADTFCVTTRSPPFDKGLRLKKCGVY 1306



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 105/230 (45%), Gaps = 24/230 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINS------------- 47
           ++ L+ L  DKT I ++P SI  L+ L +L L  C +L RLP  I               
Sbjct: 741 LKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETG 800

Query: 48  ----------LKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                     LK+L+ L+L+GC     + +++G +ESL EL  S + I+  PS+I  +  
Sbjct: 801 LQELPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSY 860

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+TL  R C       S      I  +         +   +  L  L KL++ +C   E 
Sbjct: 861 LRTLLVRKCKLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSNLE- 919

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           ++P  IG L SL TL +   N   LP SI  L NL  L L  C+ L+ LP
Sbjct: 920 SLPESIGYLTSLNTLNIINGNIRELPVSIGLLENLVNLTLSRCRMLKQLP 969



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 91/190 (47%), Gaps = 3/190 (1%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L+ L  L L  C+NL+ LPS+++ LK L++L L  C K + L E +G ++SL+ L 
Sbjct: 689 SIGSLTTLRNLNLTRCENLIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLA 748

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
              TAI   P SIF +  L+ L    C+       C             + G   LP+  
Sbjct: 749 ADKTAIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETGLQELPNTV 808

Query: 140 G-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           G L +L KL L  C  G   +P  IGNL SL  L  S +    LP++I  L  L  L + 
Sbjct: 809 GFLKNLEKLSLMGCE-GLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRTLLVR 867

Query: 199 DCKRLQSLPQ 208
            CK L  LP 
Sbjct: 868 KCK-LSKLPD 876



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 52/254 (20%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLN---- 55
           +  LR L L +  ++ E+P  +  L  L  L L  C  L  LP NI  LKSLKTL     
Sbjct: 693 LTTLRNLNLTRCENLIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKT 752

Query: 56  -------------------LLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMK 96
                              L  C     L + +G++ +L+EL +  T ++  P+++  +K
Sbjct: 753 AIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETGLQELPNTVGFLK 812

Query: 97  NLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE 156
           NL+ LS  GC G                        LM  S+  L SLT+L  S+ G+ E
Sbjct: 813 NLEKLSLMGCEGL----------------------TLMPDSIGNLESLTELLASNSGIKE 850

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
             +PS IG+L  L+TL + K     LP S   L ++ +L L D   ++ LP     ++++
Sbjct: 851 --LPSTIGSLSYLRTLLVRKCKLSKLPDSFKTLASIIELDL-DGTYIRYLPDQIGELKQL 907

Query: 217 R---VNGCASLVTL 227
           R   +  C++L +L
Sbjct: 908 RKLEIGNCSNLESL 921



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 73/227 (32%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+ + L  C  L  +P +++    L+ +NL  C     + E++G + +L  L+++    R
Sbjct: 649 LMVMNLSNCYQLAAIP-DLSWCLGLEKINLANCINLTRIHESIGSLTTLRNLNLT----R 703

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
           C                                  NL+   SD+        SGL  L  
Sbjct: 704 CE---------------------------------NLIELPSDV--------SGLKHLES 722

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           L LS+C     A+P +IG L SLKTL   K   V LP SI  L  LE+L L+ C  L+ L
Sbjct: 723 LILSECS-KLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSHLRRL 781

Query: 207 P--------------------QLP------PNVEKVRVNGCASLVTL 227
           P                    +LP       N+EK+ + GC  L  +
Sbjct: 782 PDCIGKLCALQELSLYETGLQELPNTVGFLKNLEKLSLMGCEGLTLM 828


>gi|356524097|ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 200/456 (43%), Gaps = 71/456 (15%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            + ++P SI+ L+ +V+L L G   +  LP  I  +K L+ L ++ C   E L E++G + 
Sbjct: 894  LSKLPNSIKTLASVVELQLDGT-TITDLPDEIGEMKLLRKLEMMNCKNLEYLPESIGHLA 952

Query: 74   SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSS-------------ASCYL 117
             L  L++    IR  P SI  ++NL TL    C   +  P+S              +C  
Sbjct: 953  FLTTLNMFNGNIRELPESIGWLENLVTLRLNKCKMLSKLPASIGNLKSLYHFFMEETCVA 1012

Query: 118  PFPINLMRRSS----------DLGA----------------LMLPSLSGLGSLTKLDLSD 151
              P +  R SS          +L                  ++ PS   L  LT+LD   
Sbjct: 1013 SLPESFGRLSSLRTLRIAKRPNLNTNENSFLAEPEENHNSFVLTPSFCNLTLLTELDARS 1072

Query: 152  CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
              +  G IP +   L  L+TL L  N+F  LP+S+  L  L+ L L +C +L SLP LP 
Sbjct: 1073 WRIS-GKIPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNCTQLISLPSLPS 1131

Query: 212  NVEKVRVNGCASLVTL-----LGALK-LRKSSCTII------DFVDSLKLLGKNGLAI-- 257
            ++ ++ V  C +L T+     L +LK L+ ++C  +      + + SL+ L  +G     
Sbjct: 1132 SLIELNVENCYALETIHDMSNLESLKELKLTNCVKVRDIPGLEGLKSLRRLYLSGCVACS 1191

Query: 258  SMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACR 317
            S +R+ L  V   + + ++ +PG ++P+WF     G ++  ++P  L     +VG     
Sbjct: 1192 SQIRKRLSKVVLKNLQ-NLSMPGGKLPEWF----SGQTVCFSKPKNLELKGVIVGVVLSI 1246

Query: 318  VFHVPKHSTGIRRFYRYPHPAHV-LHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFE 376
              ++   + GI    R   P  + +  ++ ++     S  L +  +PR          F 
Sbjct: 1247 NHNI---NIGIPNMQREHMPGVLDVQANVLKQGKTLFSTVLNICGVPRTDEEHIHLCRFH 1303

Query: 377  SNHFRLSFMDEREKHCPAGSG----TGLKVKRCGFH 408
              H  ++ + + +  C +        GL++K+CG H
Sbjct: 1304 DYHQLIAILKDGDTFCVSKRNPPFDKGLELKQCGVH 1339



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 116/240 (48%), Gaps = 25/240 (10%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  LS L  L L  C +L+ LP +++ LK L++L L GC K ++L E +G ++SL+ L 
Sbjct: 711 SIGSLSTLRSLKLTRCSSLINLPIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALH 770

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSSDLGALMLP 136
             GTAI   P SIF +  L+ L   GC      PSS           + +S   G   LP
Sbjct: 771 ADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQS---GLEELP 827

Query: 137 -SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
            S+  L +L +L+L  C      IP  IG+L SL  L+ +      LP++I  L+ L +L
Sbjct: 828 DSIGSLNNLERLNLMWCE-SLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYYLREL 886

Query: 196 KLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD---SLKLLGK 252
            + +CK L  LP               S+ TL   ++L+    TI D  D    +KLL K
Sbjct: 887 SVGNCKFLSKLPN--------------SIKTLASVVELQLDGTTITDLPDEIGEMKLLRK 932



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 111/236 (47%), Gaps = 35/236 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPS----------------- 43
           ++ L+ L  D T I E+P SI  L+ L +L L+GCK+L RLPS                 
Sbjct: 763 LKSLKALHADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSG 822

Query: 44  ------NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                 +I SL +L+ LNL+ C     + +++G + SL +L  + T I+  PS+I  +  
Sbjct: 823 LEELPDSIGSLNNLERLNLMWCESLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYY 882

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GALM--LPSLSG-LGSLTKLDLSD 151
           L+ LS   C          LP  I  +    +L   G  +  LP   G +  L KL++ +
Sbjct: 883 LRELSVGNC-----KFLSKLPNSIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMN 937

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           C   E  +P  IG+L  L TL +   N   LP SI  L NL  L+L  CK L  LP
Sbjct: 938 CKNLE-YLPESIGHLAFLTTLNMFNGNIRELPESIGWLENLVTLRLNKCKMLSKLP 992



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           +P LSG   L K+DL +C +    I   IG+L +L++L L++ ++ + LP  ++ L  LE
Sbjct: 685 IPDLSGCRRLEKIDLENC-INLTNIHDSIGSLSTLRSLKLTRCSSLINLPIDVSGLKQLE 743

Query: 194 KLKLEDCKRLQSLPQ 208
            L L  C +L+SLP+
Sbjct: 744 SLFLSGCTKLKSLPE 758


>gi|224127230|ref|XP_002329432.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870482|gb|EEF07613.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1136

 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 32/335 (9%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   + E+P  + +   LV L L  C +L  +PS++  L  L+ + L  C+   +   
Sbjct: 671 LSDSPYLTELP-DLSMAKNLVSLDLTDCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSFPM 729

Query: 68  TVGQV-------------------ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
              +V                   +++E L +  T+I+  P S+     L+ L   GC  
Sbjct: 730 LDSKVLRFLLISRCLDVTTCPTISQNMEWLWLEQTSIKEVPQSV--TGKLERLCLSGC-- 785

Query: 109 PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
           P  +    +   I ++         +  S+  L  L  LD+S C   E ++P     + S
Sbjct: 786 PEITKFPEISGDIEILDLRGTAIKEVPSSIQFLTRLEVLDMSGCSKLE-SLPEITVPMES 844

Query: 169 LKTLYLSKNNFVTLPAS-INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           L +L LSK     +P+S I  + +L  L L D   +++LP+LPP++  +  + CASL T+
Sbjct: 845 LHSLKLSKTGIKEIPSSLIKHMISLTFLNL-DGTPIKALPELPPSLRYLTTHDCASLETV 903

Query: 228 LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
             ++ + +    + DF +  KL  +  L  +M  +       P     +V+PGSEIP+WF
Sbjct: 904 TSSINIGRLELGL-DFTNCFKL-DQKPLVAAMHLKIQSGEEIPDGGIQMVLPGSEIPEWF 961

Query: 288 MYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
             +  GSS+T+  PS   N +Q+ G A C VF +P
Sbjct: 962 GDKGIGSSLTMQLPS---NCHQLKGIAFCLVFLLP 993



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 24/132 (18%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR--------------------LPSNIN 46
           L L++T IKE+P S+     L +L L GC  + +                    +PS+I 
Sbjct: 759 LWLEQTSIKEVPQSVT--GKLERLCLSGCPEITKFPEISGDIEILDLRGTAIKEVPSSIQ 816

Query: 47  SLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            L  L+ L++ GC K E+L E    +ESL  L +S T I+  PSS  L+K++ +L+F   
Sbjct: 817 FLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSS--LIKHMISLTFLNL 874

Query: 107 NGPPSSASCYLP 118
           +G P  A   LP
Sbjct: 875 DGTPIKALPELP 886


>gi|105922680|gb|ABF81430.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1282

 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 163/383 (42%), Gaps = 89/383 (23%)

Query: 34  GCKNLVRLP--SNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPS 90
           GCK+ + L   +  NSL   KT NL G             + +LE L + G T++     
Sbjct: 659 GCKSAINLKIINLSNSLNLSKTPNLTG-------------IPNLESLILEGCTSLSEVHP 705

Query: 91  SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLS 150
           S+ L K L+ ++   C              I ++  + ++ +L + +L G   L K    
Sbjct: 706 SLALHKKLQHVNLVNCKS------------IRILPNNLEMESLKVCTLDGCSKLEKF--- 750

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP 210
                    P  IGN++ L  L L + +   LP+SI+ L  L  L +  CK L+S+P   
Sbjct: 751 ---------PDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIP--- 798

Query: 211 PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAP 270
                      +S+  L    KL  S C+       LK + +N   +  L EF + +S P
Sbjct: 799 -----------SSIGCLKSLKKLDLSGCS------ELKCIPENLGKVESLEEF-DGLSNP 840

Query: 271 SHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRR 330
              F I VPG+EIP WF ++++GSSI+V  PS        +G+ AC  F+    S  +  
Sbjct: 841 RPGFGIAVPGNEIPGWFNHRSKGSSISVQVPS------GRMGFFACVAFNANDESPSLFC 894

Query: 331 FYR------YPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLS 383
            ++      YP P     C   E  GH  SDH+WL YL         +W  ES ++  LS
Sbjct: 895 HFKANGRENYPSPM----CINFE--GHLFSDHIWLFYLSFDYLKELQEWQHESFSNIELS 948

Query: 384 FMDEREKHCPAGSGTGLKVKRCG 406
           F    +         G+KV  CG
Sbjct: 949 FHSYEQ---------GVKVNNCG 962



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD+T I ++P SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 757 MNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 816

Query: 61  KFENLLETVGQVESLEELD 79
           + + + E +G+VESLEE D
Sbjct: 817 ELKCIPENLGKVESLEEFD 835



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 31/171 (18%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L  L+L+  T + E+  S+ L   L  + L  CK++  LP+N+  ++SLK   L GC K 
Sbjct: 689 LESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIRILPNNL-EMESLKVCTLDGCSKL 747

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPF 119
           E   + +G +  L  L +  T+I   PSSI  +  L  LS   C      PSS  C    
Sbjct: 748 EKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGC---- 803

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                                L SL KLDLS C   +  IP ++G + SL+
Sbjct: 804 ---------------------LKSLKKLDLSGCSELK-CIPENLGKVESLE 832


>gi|357513659|ref|XP_003627118.1| Disease resistance protein [Medicago truncatula]
 gi|355521140|gb|AET01594.1| Disease resistance protein [Medicago truncatula]
          Length = 913

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 142/299 (47%), Gaps = 38/299 (12%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           LV L L GCK L  L S  N L SL+ +++ GC    +L E     +S+EELD+S T I 
Sbjct: 597 LVTLLLDGCKKLEILVSE-NHLTSLQKIDVSGC---SSLREFSLSSDSIEELDLSNTGIE 652

Query: 87  CPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINL----MRRSSDLGALMLPSLS 139
              SSI  M  L  L  +G    N P   +S      I+L    +   S L AL      
Sbjct: 653 ILHSSIGRMSMLWRLDLQGLRLKNLPKEMSSMRSLTEIDLSNCNVVTKSKLEAL----FG 708

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
           GL SL  L L DCG     +P +I +L  L  L L  +N   LP S   L  L  L L++
Sbjct: 709 GLESLIILYLKDCG-NLLELPVNIDSLSLLYELRLDGSNVKMLPTSFKNLSRLRILYLDN 767

Query: 200 CKRLQSLPQLPPNVEKVRVNGCASLVTL--LGALKLR-KSSCTIIDFVDSLKLLGKNGLA 256
           CK+L  L ++PP++E++ VN C SLV +  L AL    K     I F +++KL   +  +
Sbjct: 768 CKKLGCLSEVPPHIEELHVNNCISLVKVSSLKALSHSMKGWKKEISFKNTIKL---DAPS 824

Query: 257 ISMLRE--FLEVVSAPSHKFSIV--------------VPGSEIPKWFMYQNEGSSITVT 299
           ++ + E   L + SA  H   IV              +PG  +P  F ++  GSS ++T
Sbjct: 825 LNRITEDVILTMKSAAFHNTIIVYDVHGWSYNGVHFWLPGCTVPSQFKFRAIGSSSSIT 883



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 40/255 (15%)

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL--LGALKLR-KSSC 238
           LP S   L  L  L L++CK+L  L ++PP++E++ VN C SLV +  L AL    K   
Sbjct: 2   LPTSFKNLSRLRILYLDNCKKLGCLSEVPPHIEELHVNNCISLVKVSSLKALSHSMKGWK 61

Query: 239 TIIDFVDSLKLLGKNGLAISMLRE--FLEVVSAPSHKFSIV--------------VPGSE 282
             I F +++KL   +  +++ + E   L + SA  H   IV              +PG  
Sbjct: 62  KEISFKNTIKL---DAPSLNRITEDVILTMKSAAFHNTIIVYDLHGWSYNGVHFWLPGCT 118

Query: 283 IPKWFMYQNEG--SSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHV 340
           +P  F ++  G  SSIT+  P    ++  +        F + +H   +   ++Y   +  
Sbjct: 119 VPSQFKFRAIGSSSSITIKIPPLSKDVGFIYSVVVSPSFQMEEHGNNLEIRFKYYSESGD 178

Query: 341 LHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGL 400
           L+            DH+++         C  + HF  N F  S  +       +G   G 
Sbjct: 179 LNFINSHSIKDVSLDHVFM---------CYNEPHFIGNAFEFSVTN------LSGDLNGS 223

Query: 401 KV-KRCGFHPGYMHE 414
            + K CG +P Y  E
Sbjct: 224 YILKECGIYPIYYSE 238


>gi|224101027|ref|XP_002334313.1| predicted protein [Populus trichocarpa]
 gi|222871050|gb|EEF08181.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+  SIE L+ LV L +KGC  L  LP +I +LKSL+TLN+ GC + E L E +G +ESL
Sbjct: 80  EVHQSIENLTSLVFLNMKGCWRLKNLPESIGNLKSLETLNISGCSQLEKLPERMGDMESL 139

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
            EL  +G       SSI  +K+++ LS  G +  P S S  L    NL R       L+ 
Sbjct: 140 TELLANGIENEQFLSSIGQLKHVRRLSLCGYSSAPPSCSLILAGASNLKR-------LLP 192

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            S +   S+ +L+L + GL + A    D   L +L+ L L  N F ++P+ I  L  L+ 
Sbjct: 193 TSFTEWISVKRLELFNGGLTDRATNCVDFSGLSALEFLDLRGNKFSSVPSGIGFLPKLDV 252

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L L  C+ + S+  LP ++       C SL
Sbjct: 253 LFLHGCEHIVSILDLPSSLSCFSAPYCKSL 282


>gi|224131094|ref|XP_002328452.1| predicted protein [Populus trichocarpa]
 gi|222838167|gb|EEE76532.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 135/263 (51%), Gaps = 28/263 (10%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P +I+ L  LV+L L  C  LVRLP++I  LK L  LNL G  K  NL + +G++ 
Sbjct: 238 LASLPDNIDELKSLVELDLYSCSKLVRLPNSICKLKCLAKLNLGGQPKLANLPDNIGELR 297

Query: 74  SLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS---------SASCYLPFPINL 123
           SL EL++ S + +   P SI  +++L  L+   C G  S         S  C L + +  
Sbjct: 298 SLAELNVYSCSKLASLPDSIGELRSLGALNVFSCLGLASLPDSIGGLRSLHCALYYLLLR 357

Query: 124 MRRSS-----DLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK- 176
             +S+       G   LP S+  L SL  LDLS C  G  ++P  IG L SLK L LS  
Sbjct: 358 TSKSTRQYCDSPGLASLPDSIGALKSLKWLDLSCCS-GLASLPDSIGALKSLKCLDLSGC 416

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTLLGALKL 233
           +   +LP SI  L +L++L L D   L SLP       ++E + ++GC+ LV+L  ++  
Sbjct: 417 SGLASLPDSIGALKSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPDSICA 476

Query: 234 RKSSCTIIDFVDSLKLLGKNGLA 256
            KS       +  L L+G +GLA
Sbjct: 477 LKS-------LQLLDLIGCSGLA 492



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 94/193 (48%), Gaps = 25/193 (12%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D   +  +P SI  L  L  L L  C  L  LP +I +LKSLK L+L GC    +L +++
Sbjct: 367 DSPGLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKSLKCLDLSGCSGLASLPDSI 426

Query: 70  GQVESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           G ++SL+ LD+S +  +   P SI  +K+L+ L   GC+G  S     LP          
Sbjct: 427 GALKSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVS-----LP---------- 471

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
                   S+  L SL  LDL  C  G  ++P  IG L  L++L L   +   +LP SI 
Sbjct: 472 -------DSICALKSLQLLDLIGCS-GLASLPDRIGELKYLESLELCGCSGLASLPDSIY 523

Query: 188 CLFNLEKLKLEDC 200
            L  LE L L DC
Sbjct: 524 ELKCLEWLDLSDC 536



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 121/255 (47%), Gaps = 36/255 (14%)

Query: 1   MECLREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ++CL +L L  +  +  +P +I  L  L +L +  C  L  LP +I  L+SL  LN+  C
Sbjct: 272 LKCLAKLNLGGQPKLANLPDNIGELRSLAELNVYSCSKLASLPDSIGELRSLGALNVFSC 331

Query: 60  FKFENLLETVGQVESL----------------EELDISGTAIRCPPSSIFLMKNLKTLSF 103
               +L +++G + SL                +  D  G A    P SI  +K+LK L  
Sbjct: 332 LGLASLPDSIGGLRSLHCALYYLLLRTSKSTRQYCDSPGLASL--PDSIGALKSLKWLDL 389

Query: 104 RGCNGPPSSASCYLPFPINLMR--RSSDL----GALMLP-SLSGLGSLTKLDLSDCGLGE 156
             C+G  S     LP  I  ++  +  DL    G   LP S+  L SL +LDLSD   G 
Sbjct: 390 SCCSGLAS-----LPDSIGALKSLKCLDLSGCSGLASLPDSIGALKSLKRLDLSDSP-GL 443

Query: 157 GAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN--- 212
            ++P  IG L SL+ L LS  +  V+LP SI  L +L+ L L  C  L SLP        
Sbjct: 444 ASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQLLDLIGCSGLASLPDRIGELKY 503

Query: 213 VEKVRVNGCASLVTL 227
           +E + + GC+ L +L
Sbjct: 504 LESLELCGCSGLASL 518



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 1/101 (0%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   +  +P SI  L  L  L L GC  LV LP +I +LKSL+ L+L+GC    +L +
Sbjct: 437 LSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQLLDLIGCSGLASLPD 496

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN 107
            +G+++ LE L++ G + +   P SI+ +K L+ L    C+
Sbjct: 497 RIGELKYLESLELCGCSGLASLPDSIYELKCLEWLDLSDCS 537



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 117/258 (45%), Gaps = 44/258 (17%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P SI+  + L  L L   ++   LPS+I        LNL  C    +L + + +++SL 
Sbjct: 199 IPSSIKYSTRLTTLELPRFESFCTLPSSI------LRLNLSFCESLASLPDNIDELKSLV 252

Query: 77  ELDI-SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG---- 131
           ELD+ S + +   P+SI  +K L  L+     G P  A+  LP  I  +R  ++L     
Sbjct: 253 ELDLYSCSKLVRLPNSICKLKCLAKLNL---GGQPKLAN--LPDNIGELRSLAELNVYSC 307

Query: 132 ---ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL--------------YL 174
              A +  S+  L SL  L++  C LG  ++P  IG L SL                 Y 
Sbjct: 308 SKLASLPDSIGELRSLGALNVFSC-LGLASLPDSIGGLRSLHCALYYLLLRTSKSTRQYC 366

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL---L 228
                 +LP SI  L +L+ L L  C  L SLP     ++ ++   ++GC+ L +L   +
Sbjct: 367 DSPGLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKSLKCLDLSGCSGLASLPDSI 426

Query: 229 GALKLRKSSCTIIDFVDS 246
           GALK  K     +D  DS
Sbjct: 427 GALKSLKR----LDLSDS 440


>gi|297734779|emb|CBI17013.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 118/266 (44%), Gaps = 51/266 (19%)

Query: 23  LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG 82
           L  GL+  +L  CKNL  LPSNI  L+SL TL+L  C   E   E +  ++ L+ LD+ G
Sbjct: 12  LWVGLLFFSLCFCKNLRSLPSNICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRG 71

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP------ 136
           TAI+  PSS+  +K L+ L    C    +     LP  I  +    DL A   P      
Sbjct: 72  TAIKELPSSVQRIKRLRYLDLSNCKNLET-----LPHTIYDLEFLVDLTAHGCPKLKKFP 126

Query: 137 ----SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
               +L GL SL  LDLS C   EGAI SDIG  + L+ L +S                 
Sbjct: 127 RNMGNLKGLRSLENLDLSYCDGMEGAIFSDIGQFYKLRELNISH---------------- 170

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA--------LKLRKSS-----CT 239
                  CK LQ +P+ P  + ++  + C +L TL           LKL KS+     C 
Sbjct: 171 -------CKLLQEIPEFPSTLREIDAHDCTALETLFSPSSPLWSSFLKLLKSATQDSECD 223

Query: 240 IIDFVDSLKLLGKNGLAISMLREFLE 265
               +  + + G +G+    L+  L+
Sbjct: 224 TQTGISKINIPGSSGIPSGALQIVLQ 249



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L+ L L  T IKE+P S++ +  L  L L  CKNL  LP  I  L+ L  L   GC 
Sbjct: 61  MQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNLETLPHTIYDLEFLVDLTAHGCP 120

Query: 61  KFENLLETVGQVE---SLEELDIS 81
           K +     +G ++   SLE LD+S
Sbjct: 121 KLKKFPRNMGNLKGLRSLENLDLS 144


>gi|297791241|ref|XP_002863505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309340|gb|EFH39764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1137

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 187/440 (42%), Gaps = 54/440 (12%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +K +P  +  +  L  L LKGC +L  LP    +L SLKTL L GC  F++       
Sbjct: 654  TTLKTLPHDMHKMKVLSFLNLKGCTSLEFLPEM--NLVSLKTLTLSGCSSFKDFPLISDN 711

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E+L    + GT I   P+++  +++L  L+ + C          +P  +N ++    L 
Sbjct: 712  IETLY---LDGTEISQLPTNMEKLQSLVVLNMKDCKMLEE-----IPGRVNELKA---LQ 760

Query: 132  ALMLPSLSGLGSLTKLDLSDCG--LGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINC 188
             L+L     L +  ++++S     L +G     +  L S++ L LS+N  ++ LP  I+ 
Sbjct: 761  ELILSDCFNLKNFPEINMSSLNILLLDGTAVEVMPQLPSVQYLSLSRNTKISCLPIGISH 820

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIIDF 243
            L  L+ L L+ C +L S+P+ PPN++ +  +GC+ L T+   L       +  S  I   
Sbjct: 821  LSQLKWLNLKYCTKLTSVPEFPPNLQCLDAHGCSLLKTVSKPLARIMPTEQNHSTFIFTN 880

Query: 244  VDSLKLLGKNGLA---------ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
              +L+   K  +          +S  R+           FS   PG E+P WF ++  GS
Sbjct: 881  CQNLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGS 940

Query: 295  SITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF---------------YRYPHPAH 339
             + V    +  +  ++ G A C V    +H   I RF               + +P  + 
Sbjct: 941  ELKVKLLPHWHD-KKLAGIALCAVVSCFEHQDQISRFSVTCTFKVEDKSWIPFTFPVGSW 999

Query: 340  VLH-----CSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPA 394
              H        +++     SDH+++ Y    SY   +K   + N  + +           
Sbjct: 1000 TRHEDGKVTRHEDEKDKIESDHVFIGY---TSYPHTIKCPEDGNSDKCNSTQASLNFTIT 1056

Query: 395  GSGTGLKVKRCGFHPGYMHE 414
            G+   LKV +CGF   Y  +
Sbjct: 1057 GANEKLKVLQCGFSLVYARD 1076



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 22/138 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +  L LD T+I ++P ++E L  LV L +K CK L  +P  +N LK+L+ L L  CF  +
Sbjct: 712 IETLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKALQELILSDCFNLK 771

Query: 64  NL-----------------LETVGQVESLEELDIS-GTAIRCPPSSIFLMKNLKTLSFRG 105
           N                  +E + Q+ S++ L +S  T I C P  I  +  LK L+ + 
Sbjct: 772 NFPEINMSSLNILLLDGTAVEVMPQLPSVQYLSLSRNTKISCLPIGISHLSQLKWLNLKY 831

Query: 106 CNGPPSSASCYLPFPINL 123
           C    S       FP NL
Sbjct: 832 CTKLTSVPE----FPPNL 845


>gi|297791235|ref|XP_002863502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309337|gb|EFH39761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1161

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 157/332 (47%), Gaps = 39/332 (11%)

Query: 24  LSGLVQ------LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEE 77
           LSGL +      L L+GC +L  L  ++NS KSLKTL L GC  F+   E     E+LE 
Sbjct: 674 LSGLSKAQNLQVLNLEGCTSLKSL-GDVNS-KSLKTLTLSGCSNFK---EFPLIPENLEA 728

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
           L + GTAI   P ++  ++ L +L+ + C    +     +P  +  ++    L  L+L  
Sbjct: 729 LYLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKN-----IPTFVGELK---SLQKLVLSG 780

Query: 138 LSGLGSLTKLDLSDCG--LGEGAIPSDIGNLHSLKTLYLSKN-NFVTLPASINCLFNLEK 194
              L   ++++ S     L +G     +  L S++ L LS+N N   LPA IN L  L +
Sbjct: 781 CLKLKEFSEINKSSLKFLLLDGTSIKTMPQLPSVQYLCLSRNDNLSYLPAGINQLSQLTR 840

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK----LRKSSCTIIDFV--DSLK 248
           L L+ CK+L S+P+LPPN++ +  +GC+SL T+   L       ++ CT  +F   D+L+
Sbjct: 841 LDLKYCKKLTSIPELPPNLQYLDAHGCSSLNTVAKPLARIMPTVQNRCT-FNFTNCDNLE 899

Query: 249 LLGKNGLA---------ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT 299
               + +          +S  R+      +    F+   PG E+P WF ++  GS +   
Sbjct: 900 QAAMDEITSFAQSKCQFLSDARKHYNEGFSSEALFTTCFPGCEVPSWFSHEERGSLMQRK 959

Query: 300 RPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
              +  +   + G A C V   P   T I  F
Sbjct: 960 LLPHWHD-KSLSGIALCAVVSFPAGQTQISSF 990


>gi|104646943|gb|ABF74095.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 157/370 (42%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L 
Sbjct: 295 LEXXXTMXXLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRXXPWSIARLTRLQVLX 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                  P                   L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 IGNSFFTPEG-----------------LLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL  L  L LS      +PASI  L  L +L L +C+RLQ+LP   P  +  + ++ C
Sbjct: 396 IGNLWXLLXLDLSGXXXXXIPASIKRLTRLNRLNLNNCQRLQALPXXXPXGLLXIXIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +D    + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCYKLDQAAQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F     G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTXFNXXVMGPSLNIQLPQSESS-SDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 99/204 (48%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG               L    F     PP S S      I ++
Sbjct: 201 LPDTLQNLTSLETLEVSGC--------------LNVNEF-----PPVSTS------IEVL 235

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
           R                       +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 236 R-----------------------ISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL    ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCTSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPPVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L      NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCTSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|255564962|ref|XP_002523474.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537302|gb|EEF38933.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1091

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 209/516 (40%), Gaps = 118/516 (22%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L EL + +++I+++    E    L +L L    NL RLP +++S  +L ++ L GC 
Sbjct: 606  MENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLP-DLSSTTNLTSIELWGC- 663

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E+LLE                     PSS+   K L +L+   C    S         
Sbjct: 664  --ESLLEI--------------------PSSVQKCKKLYSLNLDNCKELRS--------- 692

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                          LPSL  L SL+ L L+ C      +P DI     +K L L  +   
Sbjct: 693  --------------LPSLIQLESLSILSLA-CCPNLKMLP-DIP--RGVKDLSLHDSGLE 734

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQL--PPNVEKVRVNGCASLVTL---------LG 229
              P+S+  L NL    +  CK L+SLP L    ++  + ++GC++L  L         +G
Sbjct: 735  EWPSSVPSLDNLTFFSVAFCKNLRSLPSLLQWKSLRDIDLSGCSNLKVLPEIPDLPWQVG 794

Query: 230  ALKLRKSSCTIIDFVDSLKL--LGKNGLAISMLREFLEVVSAPSHK-FSIVVPGSEIPKW 286
             L+  +       F++ + L    +  +     +   E+ SA +   F++ + GS+ P+W
Sbjct: 795  ILQGSRKDYCRFHFLNCVNLGWYARLNIMACAQQRIKEIASAKTRNYFAVALAGSKTPEW 854

Query: 287  FMYQNEGSSITVTRPSYLCNMNQV-VGYAACRV--FHVPKHSTGIRRFY-----RYPHPA 338
            F YQ+ G SIT++ P+  C+ N + +G+A C V  F  P   +    FY     R+ +  
Sbjct: 855  FSYQSLGCSITISLPT--CSFNTMFLGFAFCAVLEFEFPLVISRNSHFYIACESRFENTN 912

Query: 339  HVLHCSMDEKFGHRG------SDHLWLLY-----------------LPRQSYYCNVKWHF 375
              +    D  F          SDH++L Y                 L + S+    ++ F
Sbjct: 913  DDIR--DDLSFSASSLETIPESDHVFLWYRFNSSDLNSWLIQNCCILRKASFEFKAQYRF 970

Query: 376  ESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTK-QWTRFTSYNLN 434
             SNH             P+     +KVKRCG H  Y   V+      K QW + T  N N
Sbjct: 971  LSNHH------------PSTEKWEVKVKRCGVHLIYNENVQNAIAGDKNQWQQVTETNSN 1018

Query: 435  --EFHHDFVGSNMAVAKANGSGCCDDYDEEPQPNRF 468
                  D+  +   +    GSG     +EEPQ  R 
Sbjct: 1019 NKRSRDDYCSNQTNIIADGGSGYA---EEEPQAKRL 1051


>gi|224133158|ref|XP_002321497.1| predicted protein [Populus trichocarpa]
 gi|222868493|gb|EEF05624.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 162/370 (43%), Gaps = 62/370 (16%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG----- 58
           + EL LD+T I  +P  I  L  + +L ++ C +L  LP +I S+ SL TL+L G     
Sbjct: 244 ISELELDETSISHLPEQIGGLKMIEKLYMRKCTSLRSLPESIGSMLSLTTLDLFGSNIIE 303

Query: 59  ------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
                             C K + L  ++G+++SL  L +  TA+   P S   + NL  
Sbjct: 304 LPESLGMLENLVMLRLHQCRKLQKLPVSIGKLKSLCHLLMEKTAVTVLPESFGKLSNLMI 363

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           L  R    P  S S            + +   ++  S   L  L +L+     +  G IP
Sbjct: 364 LKMR--KEPLESPS------------TQEQLVVLPSSFFELSLLEELNARAWRIS-GKIP 408

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
            D   L SL+ L L  NNF +LP+S+  L  L +L L  C+ L+SLP LP ++E+V V+ 
Sbjct: 409 DDFEKLSSLEILDLGHNNFSSLPSSLCGLSLLRELHLPHCEELESLPPLPSSLEEVDVSN 468

Query: 221 CASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAI--SMLREFLEVVSAPSHKF---- 274
           C +L T+     L   S T+++  +  K++   G+    S+ R ++    A S K     
Sbjct: 469 CFALETMSDVSNL--GSLTLLNMTNCEKVVDIPGIECLKSLKRLYMSNCKACSLKVKRRL 526

Query: 275 ---------SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHS 325
                    ++ +PGS+IP WF  ++   S    R         ++G        +P+H 
Sbjct: 527 SKVCLRNIRNLSMPGSKIPDWFSQEDVKFSERRNREIKAV----IIGVVVSLDCQIPEH- 581

Query: 326 TGIRRFYRYP 335
             +R F   P
Sbjct: 582 --LRYFPVVP 589



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 131/280 (46%), Gaps = 54/280 (19%)

Query: 27  LVQLTLKGCKNLVRLPSNIN--------------------SLKSLKTLNLLGCFKFENLL 66
           L+QL L  C NLV  PS+++                    SL +L+ L+L+ C     + 
Sbjct: 129 LLQLNLNDCSNLVEFPSDVSGLKELSLNQSAVEELPDSVGSLSNLEKLSLMWCQSLTAIP 188

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E+VG ++ L E+ I+ +AI+  P +I  +  LKTL   GC      +   LP  I  +  
Sbjct: 189 ESVGNLQLLTEVSINRSAIKELPPAIGSLPYLKTLLAGGC-----GSLSKLPDSIGGLAS 243

Query: 127 SSDL-----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            S+L         LP  + GL  + KL +  C     ++P  IG++ SL TL L  +N +
Sbjct: 244 ISELELDETSISHLPEQIGGLKMIEKLYMRKCT-SLRSLPESIGSMLSLTTLDLFGSNII 302

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            LP S+  L NL  L+L  C++LQ LP        V +    SL  LL    + K++ T+
Sbjct: 303 ELPESLGMLENLVMLRLHQCRKLQKLP--------VSIGKLKSLCHLL----MEKTAVTV 350

Query: 241 IDFVDSLKLLGK--NGLAISMLREFLEVVSAPSHKFSIVV 278
           +      +  GK  N + + M +E LE   +PS +  +VV
Sbjct: 351 LP-----ESFGKLSNLMILKMRKEPLE---SPSTQEQLVV 382


>gi|297800054|ref|XP_002867911.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313747|gb|EFH44170.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 966

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 150/333 (45%), Gaps = 50/333 (15%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV- 72
           +K +P  +  +  LV L ++GC +L  +P    +L SLK L L  C +F+       QV 
Sbjct: 459 VKVLPEKMGNMKSLVFLNMRGCTSLRNIPKA--NLSSLKVLILSDCSRFQEF-----QVI 511

Query: 73  -ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            E+LE L + GTA+   P +I  ++ L  L+ R C      A  +LP   + +R+   L 
Sbjct: 512 SENLETLYLDGTALETLPPAIGNLQRLVLLNLRSCK-----ALEHLP---SSLRKLKALE 563

Query: 132 ALMLPSLSGLGSLTKLDLSDCG--------LGEGAIPSDIGNL----HSLKTLYLSKNNF 179
            L+L   S L S      +D G        L +G    +I  +     SL+ L LS N+ 
Sbjct: 564 DLILSGCSKLKSFP----TDTGNMKHLRILLYDGTALKEIQMILHFKESLQRLCLSGNSM 619

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK---LRKS 236
           + LPA+I  L +L+ L L+ C+ L  LP LPPN+E +  +GC  L  ++  L    + + 
Sbjct: 620 INLPANIKQLNHLKWLDLKYCENLIELPTLPPNLEYLDAHGCHKLEHVMDPLAIALITEQ 679

Query: 237 SCTIIDFVDSLKLLGKNGLAISMLREF-----------LEVVSAPSHKFSIVVPGSEIPK 285
           +C+   F +   L       I+   E            +  VS  S  F    PG E+P 
Sbjct: 680 TCSTFIFTNCTNLEEDARNTITSYAERKCQLHACKCYDMGFVSRAS--FKTCFPGCEVPL 737

Query: 286 WFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
           WF +Q  GS +        C+ N V G A C V
Sbjct: 738 WFQHQAVGSVLEKRLQPNWCD-NLVSGIALCAV 769


>gi|297802316|ref|XP_002869042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314878|gb|EFH45301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1178

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 160/363 (44%), Gaps = 64/363 (17%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T ++E+P  ++ L  LV L ++GC +L  LP    +L S+KTL L  C   E       Q
Sbjct: 687  TSLEELPSEMKSLENLVFLNMRGCTSLRVLPH--MNLISMKTLILTNCSSLEEF-----Q 739

Query: 72   V--ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY------------- 116
            V  +++E L + GTAI   P ++  ++ L  L+ + C    +   C              
Sbjct: 740  VISDNIETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCLGRLKALQELVLSG 799

Query: 117  ------LPFPINLMRRSSDLGALML--------PSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                   P PI  M+    L  L+L        P +    S    DL +   G       
Sbjct: 800  CSTLKTFPVPIENMKC---LQILLLDGTEIKEIPKILQYNSSKVEDLRELRRG------- 849

Query: 163  IGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
            +  L SL+ L LS+N  ++ L   I+ L++L+ L L+ CK L S+  LPPN+E +  +GC
Sbjct: 850  VKGLSSLRRLCLSRNGMISNLQIDISQLYHLKWLDLKYCKNLTSISLLPPNLEILDAHGC 909

Query: 222  ASLVTLLGALKLRK-----------SSCTIIDFV--DSLKLLGKNGLAISMLREFLEVVS 268
              L T+   + L K           ++C  ++ V  +S+ L  +    +  LR + E   
Sbjct: 910  EKLKTVASPMALPKLMEQVRSKFIFTNCNKLEQVAKNSITLYAQRKCQLDALRCYKEGTV 969

Query: 269  APSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGI 328
            + +   +   PGSE+P WF +Q  GS + +  P + C+ N +     C V   P+    I
Sbjct: 970  SEALLIT-CFPGSEVPSWFNHQTFGSKLKLKFPPHWCD-NGLSTLVLCAVVKFPRDE--I 1025

Query: 329  RRF 331
             RF
Sbjct: 1026 NRF 1028


>gi|224133150|ref|XP_002321495.1| predicted protein [Populus trichocarpa]
 gi|222868491|gb|EEF05622.1| predicted protein [Populus trichocarpa]
          Length = 767

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 200/488 (40%), Gaps = 84/488 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---- 59
           + EL LD+T I  +P  I  L  + +L ++ C +L  LP +I S+ SL TLNL GC    
Sbjct: 308 ISELELDETSISHLPEQIGGLKMIEKLYMRKCTSLSSLPESIGSMLSLTTLNLFGCNINE 367

Query: 60  -------------------FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
                               K + L  ++G+++SL  L +  TA+   P S   + NL  
Sbjct: 368 LPESFGMLENLVMLRLHQCRKLQKLPVSIGKLKSLCHLLMEKTAVTVLPESFGKLSNLMI 427

Query: 101 LSF-RGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAI 159
           L   +     PS+    +  P                S   L  L +L+     +  G I
Sbjct: 428 LKMGKEPLESPSTQEQLVVLP---------------SSFFELSLLKELNARAWRIS-GKI 471

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
           P D   L SL+ + L  NNF +LP+S+  L  L KL L  C+ L+SLP LP ++ +V V+
Sbjct: 472 PDDFEKLSSLEMVDLGHNNFSSLPSSLCGLSLLRKLHLPHCEELESLPPLPSSLVEVDVS 531

Query: 220 GCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAI--SMLREFLEVVSAPSHKF--- 274
            C +L T+     L   S T+++  +  K++   G+    S+ R ++    A S K    
Sbjct: 532 NCFALETMSDVSNL--GSLTLLNMTNCEKVVDIPGIECLKSLKRLYMSNCKACSLKVKRR 589

Query: 275 ----------SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKH 324
                     ++ +PGS+IP WF  ++   S    R         ++G        +P+ 
Sbjct: 590 LSKVCLRNIRNLSMPGSKIPDWFSQEDVKFSERRNREIKAV----IIGVVVSLDRQIPEQ 645

Query: 325 STGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQS----YYCNVKWHFESNHF 380
                   RY      +  ++ ++     S  L+L  +P+      + C    HF     
Sbjct: 646 -------LRYLPVVPDIQVNLLDQNKPIFSTTLYLQGIPKTHEDHIHLCRYS-HFNPLVL 697

Query: 381 RL---SFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE------VEEFDETTKQWTRFTSY 431
            L   S +  R++  P   G  L  K+CG H  Y ++       E  DE+ +  ++  + 
Sbjct: 698 MLKDGSEIQVRKRKPPVIEGVEL--KKCGIHLVYENDDDYGGNEESLDESQQSVSQKLAN 755

Query: 432 NLNEFHHD 439
             N +  D
Sbjct: 756 FFNSYEED 763



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 114/236 (48%), Gaps = 35/236 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLK-------- 52
           M  L++LL+DKT I  +P SI  L+ L +L+L GC+ + RLP ++ +L SLK        
Sbjct: 164 MYSLKQLLVDKTAISVLPESIFRLTKLEKLSLNGCQFIKRLPKHLGNLSSLKELSLNQSA 223

Query: 53  ---------------TLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                           L+L+ C     + E+VG ++ L E+ I+ +AI+  P +I  +  
Sbjct: 224 VEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSINSSAIKELPPAIGSLPY 283

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-----GALMLP-SLSGLGSLTKLDLSD 151
           LK LS  GC      +   LP  I  +   S+L         LP  + GL  + KL +  
Sbjct: 284 LKILSAGGCR-----SLSKLPDSIGGLASISELELDETSISHLPEQIGGLKMIEKLYMRK 338

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           C     ++P  IG++ SL TL L   N   LP S   L NL  L+L  C++LQ LP
Sbjct: 339 CT-SLSSLPESIGSMLSLTTLNLFGCNINELPESFGMLENLVMLRLHQCRKLQKLP 393



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 50/199 (25%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+QL L  C NLV  PS+++ LK L+ LNL  C   ++L + +G + SL++L +  TAI 
Sbjct: 119 LLQLNLNDCSNLVEFPSDVSGLKVLQNLNLSNCPNLKDLPQEIGSMYSLKQLLVDKTAIS 178

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             P SIF +  L+ LS  GC                 ++R                    
Sbjct: 179 VLPESIFRLTKLEKLSLNGC---------------QFIKR-------------------- 203

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
                       +P  +GNL SLK L L+++    LP S+  L NLEKL L  C+ L ++
Sbjct: 204 ------------LPKHLGNLSSLKELSLNQSAVEELPDSVGSLSNLEKLSLMWCQSLTAI 251

Query: 207 PQLPPNVE---KVRVNGCA 222
           P+   N++   +V +N  A
Sbjct: 252 PESVGNLQLLTEVSINSSA 270



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 31/226 (13%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKT---------------- 53
           D +++ E P  +  L  L  L L  C NL  LP  I S+ SLK                 
Sbjct: 126 DCSNLVEFPSDVSGLKVLQNLNLSNCPNLKDLPQEIGSMYSLKQLLVDKTAISVLPESIF 185

Query: 54  -------LNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
                  L+L GC   + L + +G + SL+EL ++ +A+   P S+  + NL+ LS   C
Sbjct: 186 RLTKLEKLSLNGCQFIKRLPKHLGNLSSLKELSLNQSAVEELPDSVGSLSNLEKLSLMWC 245

Query: 107 NG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                 P S  +  L   +++   SS +  L  P++  L  L  L    C      +P  
Sbjct: 246 QSLTAIPESVGNLQLLTEVSI--NSSAIKELP-PAIGSLPYLKILSAGGCR-SLSKLPDS 301

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           IG L S+  L L + +   LP  I  L  +EKL +  C  L SLP+
Sbjct: 302 IGGLASISELELDETSISHLPEQIGGLKMIEKLYMRKCTSLSSLPE 347



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 47/182 (25%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+ + L GC NLV  P +++  K+L+ LNL GC +   + ++VG   +L +L+++  +  
Sbjct: 72  LMVMDLHGCYNLVACP-DLSGCKTLEKLNLQGCVRLTKVHKSVGNARTLLQLNLNDCS-- 128

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
                                              NL+   SD+        SGL  L  
Sbjct: 129 -----------------------------------NLVEFPSDV--------SGLKVLQN 145

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           L+LS+C      +P +IG+++SLK L + K     LP SI  L  LEKL L  C+ ++ L
Sbjct: 146 LNLSNCP-NLKDLPQEIGSMYSLKQLLVDKTAISVLPESIFRLTKLEKLSLNGCQFIKRL 204

Query: 207 PQ 208
           P+
Sbjct: 205 PK 206


>gi|359486092|ref|XP_002274052.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 919

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 103/217 (47%), Gaps = 25/217 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ LR+L L  T IK++P SI  L  L  L L  C    + P    ++KSL  L LL   
Sbjct: 629 MKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQL-LLRNT 687

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             ++L +++G +ESLE LD+SG+     P     MK+L  L  R      ++A   LP  
Sbjct: 688 AIKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLR------NTAIKDLP-- 739

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                           S+  L SL  LDLSDC   E   P   GN+ SLK L L      
Sbjct: 740 ---------------DSIGDLESLESLDLSDCSKFE-KFPEKGGNMKSLKKLRLRNTAIK 783

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            LP SI  L +LE L L DC + +  P+   N++++R
Sbjct: 784 DLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLR 820



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 107/237 (45%), Gaps = 33/237 (13%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L  L+L+ C  L  LP +I  L+SL+ LNL  C KFE      G ++SL +L 
Sbjct: 577 SVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLH 636

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI---------NLMRRSSDL 130
           +  TAI+  P SI  +++L+ L    C       S +  FP           L+ R++ +
Sbjct: 637 LKDTAIKDLPDSIGDLESLEILDLSDC-------SKFEKFPEKGGNMKSLNQLLLRNTAI 689

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
             L   S+  L SL  LD+S  G      P   GN+ SL  L L       LP SI  L 
Sbjct: 690 KDLP-DSIGDLESLESLDVS--GSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLE 746

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSL 247
           +LE L L DC + +  P+   N++ ++              KLR  +  I D  DS+
Sbjct: 747 SLESLDLSDCSKFEKFPEKGGNMKSLK--------------KLRLRNTAIKDLPDSI 789



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 111/255 (43%), Gaps = 46/255 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK----------------------NL 38
           M+ L +LLL  T IK++P SI  L  L  L + G K                       +
Sbjct: 676 MKSLNQLLLRNTAIKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLRNTAI 735

Query: 39  VRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNL 98
             LP +I  L+SL++L+L  C KFE   E  G ++SL++L +  TAI+  P SI  +K+L
Sbjct: 736 KDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKSL 795

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
           + L    C       S +  FP                    +  L +L L    + +  
Sbjct: 796 EFLDLSDC-------SKFEKFP---------------EKGGNMKRLRELHLKITAIKD-- 831

Query: 159 IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           +P++I  L  LK L LS  + +      N L NL+KL +  CK    +  LP ++E++  
Sbjct: 832 LPTNISRLKKLKRLVLSDCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLEEIDA 891

Query: 219 NGCASLVTLLGALKL 233
             C S   L G L L
Sbjct: 892 YHCTSKEDLSGLLWL 906



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCYL 117
           FE  L     +E L+ +D+S +      S    M NL++L   GC    +  PS  +  L
Sbjct: 524 FERALTAYEDLERLKVIDLSYSRKLIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGN--L 581

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                L  RS D    +  S+  L SL  L+LS C   E   P   GN+ SL+ L+L   
Sbjct: 582 KKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFE-KFPGKGGNMKSLRKLHLKDT 640

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
               LP SI  L +LE L L DC + +  P+   N++ +
Sbjct: 641 AIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSL 679


>gi|298205201|emb|CBI17260.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 18/163 (11%)

Query: 75  LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
           LE L + GTAI+  PSSI  +K+L+ L    C    +     LP  IN +R    L  L+
Sbjct: 7   LEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVT-----LPDSINDLR---SLKRLI 58

Query: 135 LP----------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           LP          +L GL SL +LDLS C L EG+IP+DI  L+SL TL LS N+ V++P+
Sbjct: 59  LPGCSNLEKFPKNLEGLCSLVELDLSHCNLMEGSIPTDIWGLYSLFTLNLSGNHMVSIPS 118

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            I  L  L  L +  CK LQ +P+L  ++ ++  +GC  L  L
Sbjct: 119 GITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAHGCTKLEML 161



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 2/107 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L  L L+ T IKE+P SI+ L  L  L L  CKNLV LP +IN L+SLK L L GC 
Sbjct: 4   MKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTLPDSINDLRSLKRLILPGCS 63

Query: 61  KFENLLETVGQVESLEELDISGTAIR--CPPSSIFLMKNLKTLSFRG 105
             E   + +  + SL ELD+S   +     P+ I+ + +L TL+  G
Sbjct: 64  NLEKFPKNLEGLCSLVELDLSHCNLMEGSIPTDIWGLYSLFTLNLSG 110


>gi|82542037|gb|ABB82026.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1070

 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 146/336 (43%), Gaps = 66/336 (19%)

Query: 25  SGLVQLTLKGCKNLVR-------LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEE 77
           S L +L L+GC +LV+       LP +I ++KSLK++N+ GC + E L E +  +ESL E
Sbjct: 646 SSLEKLILEGCSSLVKGCWRLKILPESIGNVKSLKSMNISGCSQLEKLPEHMDDMESLIE 705

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSS------ASCYLPFPINLMRRSS 128
           L   G       SSI  +K ++ LS RG N     PSS      +S + P  I+    +S
Sbjct: 706 LLADGIENEQFLSSIRQLKYIRRLSLRGYNFSQNSPSSTFWLSPSSTFWPPSISSFISAS 765

Query: 129 DLG-ALMLPSLSGLGSLTK-LDLSDCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPAS 185
            L     LP       L K L+L D GL +      D   L SL+ L LS+N F +LP+ 
Sbjct: 766 VLCLKRSLPKAFIDWRLVKSLELPDAGLSDHTTNCVDFRGLSSLEVLDLSRNKFSSLPSG 825

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
           I  L NL  L +  C  L S+P LP N+  +    C S         L ++ C       
Sbjct: 826 IAFLPNLGSLIVVGCNNLVSIPDLPSNLGYLGATYCKS---------LERAMC------- 869

Query: 246 SLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPS--- 302
                  NG  I              H  +  +PG E+PKW  Y+ EG S++   P    
Sbjct: 870 -------NGGHI-------------YHFHAERIPG-EMPKWLSYRGEGCSLSFHIPPVFQ 908

Query: 303 -----YLCNMNQVVGY--AACRVFHVPKHSTGIRRF 331
                 +C + + V Y      +  +   S GI+ F
Sbjct: 909 GLVVWVVCPLQKSVHYYNKNTHIITIRNKSNGIQLF 944


>gi|311992493|gb|ABR67409.2| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 947

 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 39/257 (15%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R  L + T+++ +  S+  L  L  L L+ C NL +LPS++  LKSL+ L L  C K E+
Sbjct: 677 RLYLQECTNLRLIHESVGSLDKLDHLDLRQCTNLSKLPSHLR-LKSLQNLELSRCCKLES 735

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---------------- 108
                  ++SL  LD+  TAI+  PSSI  +  L TL+   C                  
Sbjct: 736 FPTIDENMKSLRHLDLDFTAIKELPSSIGYLTELCTLNLTSCTNLISLPNTIYLLRNLDE 795

Query: 109 -PPSSASCYLPFP----------------INLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
              S  S +  FP                I     S +   L++P+ S     T LDL  
Sbjct: 796 LLLSGCSRFRIFPHKWDRSIQPVCSPTKMIETTSWSLEFPHLLVPNESLFSHFTLLDLKS 855

Query: 152 CGLGEGA---IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           C +       I  D+     L  L LS+N F +LP+ ++   +L  L+L++CK LQ +P 
Sbjct: 856 CNISNAKFLEILCDVAPF--LSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFLQEIPN 913

Query: 209 LPPNVEKVRVNGCASLV 225
           LP N++K+  +GC SLV
Sbjct: 914 LPKNIQKMDASGCESLV 930



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 26/201 (12%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L++ T++  +  S+  L+ L+ L L GC NL + P     L SLK L L  C K E + +
Sbjct: 609 LINCTNLGMIDKSLFSLNNLIVLNLDGCSNLKKFPRGYFMLSSLKELRLSYCKKLEKIPD 668

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            +    +LE L +   T +R    S+  +  L  L  R C               NL + 
Sbjct: 669 -LSAASNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQCT--------------NLSK- 712

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                   LPS   L SL  L+LS C   E + P+   N+ SL+ L L       LP+SI
Sbjct: 713 --------LPSHLRLKSLQNLELSRCCKLE-SFPTIDENMKSLRHLDLDFTAIKELPSSI 763

Query: 187 NCLFNLEKLKLEDCKRLQSLP 207
             L  L  L L  C  L SLP
Sbjct: 764 GYLTELCTLNLTSCTNLISLP 784


>gi|326516606|dbj|BAJ92458.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 876

 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 18/228 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +K +P S+  L+ L  L L GC+ L  LP ++ SL++++TL+L  C + ++L E +G 
Sbjct: 642 TSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQTLDLSVCDELKSLPECLGS 701

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + +L+ LD+SG   +   P S+  +K L+TL   GC    S     LP  +  ++    +
Sbjct: 702 LNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLES-----LPESLGSLKTLQRM 756

Query: 131 GAL------MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
                     LP SL GL +L  LDLS C   E ++P  +G+L +L T  LS      +L
Sbjct: 757 HLFACHKLEFLPESLGGLKNLQTLDLSHCDKLE-SLPESLGSLQNLYTFDLSSCFELKSL 815

Query: 183 PASINCLFNLEKLKLEDCKRLQSLP---QLPPNVEKVRVNGCASLVTL 227
           P S+  L NL+ L L  C RL+ LP   +   N++ + ++GC  L +L
Sbjct: 816 PESLGGLKNLQTLDLTFCHRLKDLPESLESLKNLQTLNLSGCYRLKSL 863



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 25/198 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +I  +P S+  L  LV L L  C ++  +P ++ SL +L+TL+L GC K E+L E++G +
Sbjct: 619 EISAIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSL 678

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           E+++ LD+S    ++  P  +  + NL TL   GC    S     LP             
Sbjct: 679 ENIQTLDLSVCDELKSLPECLGSLNNLDTLDLSGCRKLES-----LP------------- 720

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNFVTLPASINCLF 190
                SL  L +L  LDLS CG  E ++P  +G+L +L+ ++L + +    LP S+  L 
Sbjct: 721 ----KSLGSLKTLQTLDLSGCGKLE-SLPESLGSLKTLQRMHLFACHKLEFLPESLGGLK 775

Query: 191 NLEKLKLEDCKRLQSLPQ 208
           NL+ L L  C +L+SLP+
Sbjct: 776 NLQTLDLSHCDKLESLPE 793



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 25/206 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++K +P  +  L+ L  L L GC+ L  LP ++ SLK+L+TL+L GC K E+L E++G +
Sbjct: 691 ELKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPESLGSL 750

Query: 73  ESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           ++L+ + +     +   P S+  +KNL+TL    C+   S     LP             
Sbjct: 751 KTLQRMHLFACHKLEFLPESLGGLKNLQTLDLSHCDKLES-----LP------------- 792

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
                SL  L +L   DLS C     ++P  +G L +L+TL L+  +    LP S+  L 
Sbjct: 793 ----ESLGSLQNLYTFDLSSC-FELKSLPESLGGLKNLQTLDLTFCHRLKDLPESLESLK 847

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKV 216
           NL+ L L  C RL+SLP+ P N++ +
Sbjct: 848 NLQTLNLSGCYRLKSLPKGPENLKII 873



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 13/194 (6%)

Query: 49  KSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG--- 105
           K L+ L+L  C        TVGQ++ LE L       R  P SI  +  L  L+  G   
Sbjct: 561 KCLRVLDLSRC-SITEFPSTVGQLKQLEVLIAPELQDRQFPDSITRLSRLHYLNLNGSRE 619

Query: 106 CNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
            +  PSS S  L   ++L         ++  SL  L +L  LDLS C   E ++P  +G+
Sbjct: 620 ISAIPSSVS-KLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLE-SLPESLGS 677

Query: 166 LHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGC 221
           L +++TL LS  +   +LP  +  L NL+ L L  C++L+SLP+   +++ ++   ++GC
Sbjct: 678 LENIQTLDLSVCDELKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGC 737

Query: 222 ASLVTL---LGALK 232
             L +L   LG+LK
Sbjct: 738 GKLESLPESLGSLK 751


>gi|104647001|gb|ABF74124.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 159/370 (42%), Gaps = 75/370 (20%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN-- 64
           L + +T I+E+P  I  LS L  L +   K L  LP +I+ L+SL+ L L GC   E+  
Sbjct: 235 LRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFP 294

Query: 65  ----------------------LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
                                 L E +G + +LE L  S T IR  P SI  +  L+ L+
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLA 354

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
                      S + P           L   + P LS    L  L LS+  + E  IP+ 
Sbjct: 355 I--------GNSFFTP---------EGLLHSLCPPLSRFDDLRALSLSNMNMTE--IPNS 395

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGC 221
           IGNL  L  L LS      +PASI  L  L +L L +C+RLQ+ P   P  +  + ++ C
Sbjct: 396 IGNLWXLLXLDLSGXXXXXIPASIKRLTRLNRLNLNNCQRLQAXPXXXPXGLLXIXIHSC 455

Query: 222 ASLVTLLGAL------KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA-PSHKF 274
            SLV++ G        KL  S+C  +     + L+ +N          L++ SA P H +
Sbjct: 456 TSLVSISGCFNQYCLRKLVASNCXXLXQXXQI-LIHRN----------LKLESAKPEHSY 504

Query: 275 SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRY 334
               PGS+IP  F +   G S+ +  P    + + ++G++AC +  V            Y
Sbjct: 505 ---FPGSDIPTCFNHXXMGPSLNIQLPQSE-SSSDILGFSACIMIGVDGQ---------Y 551

Query: 335 PHPAHVLHCS 344
           P     +HCS
Sbjct: 552 PMNNLKIHCS 561



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 51/204 (25%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T I+E+P SI  LS LV+L +  C+ L  LPS +  L SLK+LNL GC + EN
Sbjct: 141 RRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLEN 200

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L +T+  + SLE L++SG                                      +N  
Sbjct: 201 LPDTLQNLTSLETLEVSGC-----------------------------------LNVNEF 225

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTLP 183
            R S              S+  L +S+  + E  IP+ I NL  L++L +S+N    +LP
Sbjct: 226 PRVS-------------TSIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLASLP 270

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI+ L +LEKLKL  C  L+S P
Sbjct: 271 VSISELRSLEKLKLSGCSVLESFP 294



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  ++++++   I+ L  L ++ L  CK LV +P +++   +L+ LNL  C  
Sbjct: 24  EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYC-- 80

Query: 62  FENLLETVGQVESLEELD----ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            ++L+E    +++L+ L      +   ++  P  I L K+L+T+   GC    SS   + 
Sbjct: 81  -QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITL-KSLETVGMSGC----SSLKHFP 134

Query: 118 PFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
               N  R   SS     +  S+S L  L KLD+SDC                       
Sbjct: 135 EISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDC----------------------- 171

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGC 221
                TLP+ +  L +L+ L L+ C+RL++LP    N   +E + V+GC
Sbjct: 172 -QRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGC 219



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 51/233 (21%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---------------- 59
           E+  SI+ L GL    L  C  L  +P  I +LKSL+T+ + GC                
Sbjct: 85  EVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRL 143

Query: 60  ----FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
                K E L  ++ ++  L +LD+S    +R  PS +  + +LK+L+  GC        
Sbjct: 144 YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGC-------- 195

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                     RR  +L      +L  L SL  L++S C L     P       S++ L +
Sbjct: 196 ----------RRLENLPD----TLQNLTSLETLEVSGC-LNVNEFPRVST---SIEVLRI 237

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP---NVEKVRVNGCASL 224
           S+ +   +PA I  L  L  L + + KRL SLP       ++EK++++GC+ L
Sbjct: 238 SETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVL 290



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K MP S      LV+L +    NL +L   I  L++LK ++L  C K+ 
Sbjct: 4   LRYLRWDGYPLKTMP-SRFCPEFLVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRC-KYL 60

Query: 64  NLLETVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  + +  +LEEL++S   + +   PS    +KNLK LS            C+  +  
Sbjct: 61  VEVPDLSKATNLEELNLSYCQSLVEVTPS----IKNLKGLS------------CF--YLT 102

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           N ++       + L SL  +G      +S C       P    N    + LYLS      
Sbjct: 103 NCIQLKDIPIGITLKSLETVG------MSGCS-SLKHFPEISWNT---RRLYLSSTKIEE 152

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGALK 232
           LP+SI+ L  L KL + DC+RL++LP       +++ + ++GC  L  L   L+
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206


>gi|28555894|emb|CAD45029.1| NBS-LRR disease resistance protein homologue [Hordeum vulgare]
          Length = 1262

 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 135/243 (55%), Gaps = 32/243 (13%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            ++ +P S+  L+ L  L L  C NLV L  ++ SLK+L+TL+L GC K E+L E++G +E
Sbjct: 839  LESVPESLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGSLE 898

Query: 74   SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            +L+ L++S    +   P S+  +KNL+TL+   C     +   +LP              
Sbjct: 899  NLQILNLSNCFKLESLPESLGRLKNLQTLNISWC-----TELVFLP-------------- 939

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                +L  L +L +LDLS C   E ++P  +G+L +L+TL LSK     +LP S+  L N
Sbjct: 940  ---KNLGNLKNLPRLDLSGCMKLE-SLPDSLGSLENLETLNLSKCFKLESLPESLGGLQN 995

Query: 192  LEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL---LGALK-LRKSSCTIIDFV 244
            L+ L L  C +L+SLP+      N++ ++++ C  L +L   LG LK L+  + ++ D +
Sbjct: 996  LQTLDLLVCHKLESLPESLGGLKNLQTLQLSFCHKLESLPESLGGLKNLQTLTLSVCDKL 1055

Query: 245  DSL 247
            +SL
Sbjct: 1056 ESL 1058



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 17/222 (7%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
            L  L  L L GCK L  LP ++ SL++L+ LNL  CFK E+L E++G++++L+ L+IS  
Sbjct: 873  LKNLQTLDLSGCKKLESLPESLGSLENLQILNLSNCFKLESLPESLGRLKNLQTLNISWC 932

Query: 83   TAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCYLPFPINLMRRSSDLGALMLP-S 137
            T +   P ++  +KNL  L   GC    + P S  S      +NL   S       LP S
Sbjct: 933  TELVFLPKNLGNLKNLPRLDLSGCMKLESLPDSLGSLENLETLNL---SKCFKLESLPES 989

Query: 138  LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLK 196
            L GL +L  LDL  C   E ++P  +G L +L+TL LS  +   +LP S+  L NL+ L 
Sbjct: 990  LGGLQNLQTLDLLVCHKLE-SLPESLGGLKNLQTLQLSFCHKLESLPESLGGLKNLQTLT 1048

Query: 197  LEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALK 232
            L  C +L+SLP+      N+  +++  C  L +L   LG++K
Sbjct: 1049 LSVCDKLESLPESLGSLKNLHTLKLQVCYKLKSLPESLGSIK 1090



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 125/234 (53%), Gaps = 22/234 (9%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T++K +P ++ +L  L  L L  C+ L  LP ++ S+++L+ LNL  CF+ E L E++G 
Sbjct: 645 TNVKVIPKALGILRNLQTLDLSWCEKLESLPESLGSVQNLQRLNLSNCFELEALPESLGS 704

Query: 72  VESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR----R 126
           ++ ++ LD+S    +   P S+  +KN++TL    C          +  P NL R    R
Sbjct: 705 LKDVQTLDLSSCYKLESLPESLGSLKNVQTLDLSRCYK-------LVSLPKNLGRLKNLR 757

Query: 127 SSDLGA-----LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
           + DL           S   L +L  L+LS+C   E ++P   G+L +L+TL L +     
Sbjct: 758 TIDLSGCKKLETFPESFGSLENLQILNLSNCFELE-SLPESFGSLKNLQTLNLVECKKLE 816

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLLGAL 231
           +LP S+  L NL+ L    C +L+S+P+      N++ ++++ C +LV+LL +L
Sbjct: 817 SLPESLGGLKNLQTLDFSVCHKLESVPESLGGLNNLQTLKLSVCDNLVSLLKSL 870



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 25/197 (12%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            ++ +P S+  L  L  L +  C  LV LP N+ +LK+L  L+L GC K E+L +++G +E
Sbjct: 911  LESLPESLGRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDLSGCMKLESLPDSLGSLE 970

Query: 74   SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            +LE L++S    +   P S+  ++NL+TL    C+   S     LP              
Sbjct: 971  NLETLNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLES-----LP-------------- 1011

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                SL GL +L  L LS C   E ++P  +G L +L+TL LS  +   +LP S+  L N
Sbjct: 1012 ---ESLGGLKNLQTLQLSFCHKLE-SLPESLGGLKNLQTLTLSVCDKLESLPESLGSLKN 1067

Query: 192  LEKLKLEDCKRLQSLPQ 208
            L  LKL+ C +L+SLP+
Sbjct: 1068 LHTLKLQVCYKLKSLPE 1084



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 21/236 (8%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T++  +P ++  L  L +L L GC  L  LP ++ SL++L+TLNL  CFK E+L E++G 
Sbjct: 933  TELVFLPKNLGNLKNLPRLDLSGCMKLESLPDSLGSLENLETLNLSKCFKLESLPESLGG 992

Query: 72   VESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            +++L+ LD +    +   P S+  +KNL+TL    C+   S     LP  +  ++    L
Sbjct: 993  LQNLQTLDLLVCHKLESLPESLGGLKNLQTLQLSFCHKLES-----LPESLGGLKNLQTL 1047

Query: 131  GALM------LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
               +      LP SL  L +L  L L  C     ++P  +G++ +L TL LS  +N  ++
Sbjct: 1048 TLSVCDKLESLPESLGSLKNLHTLKLQVC-YKLKSLPESLGSIKNLHTLNLSVCHNLESI 1106

Query: 183  PASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGALK 232
            P S+  L NL+ L L +C +L+S+P+      N++ + ++ C  LV+L   LG LK
Sbjct: 1107 PESVGSLENLQILNLSNCFKLESIPKSLGSLKNLQTLILSWCTRLVSLPKNLGNLK 1162



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 108/206 (52%), Gaps = 25/206 (12%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            +K +P S+  +  L  L L  C NL  +P ++ SL++L+ LNL  CFK E++ +++G ++
Sbjct: 1079 LKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGSLK 1138

Query: 74   SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            +L+ L +S  T +   P ++  +KNL+TL   GC    S     LP              
Sbjct: 1139 NLQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCKKLES-----LP-------------- 1179

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                SL  L +L  L+LS+C   E ++P  +G+L  L+TL L +     +LP S+  L +
Sbjct: 1180 ---DSLGSLENLQTLNLSNCFKLE-SLPEILGSLKKLQTLNLFRCGKLESLPESLGSLKH 1235

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVR 217
            L+ L L DC +L+ LP+   N+   R
Sbjct: 1236 LQTLVLIDCPKLEYLPKSLENLSGNR 1261



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 31/227 (13%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            ++ +P S+  L  L  LTL  C  L  LP ++ SLK+L TL L  C+K ++L E++G ++
Sbjct: 1031 LESLPESLGGLKNLQTLTLSVCDKLESLPESLGSLKNLHTLKLQVCYKLKSLPESLGSIK 1090

Query: 74   SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            +L  L++S    +   P S+  ++NL+ L+   C            F +  + +S     
Sbjct: 1091 NLHTLNLSVCHNLESIPESVGSLENLQILNLSNC------------FKLESIPKS----- 1133

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                 L  L +L  L LS C     ++P ++GNL +L+TL LS      +LP S+  L N
Sbjct: 1134 -----LGSLKNLQTLILSWCT-RLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLEN 1187

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVRVNG---CASLVTL---LGALK 232
            L+ L L +C +L+SLP++  +++K++      C  L +L   LG+LK
Sbjct: 1188 LQTLNLSNCFKLESLPEILGSLKKLQTLNLFRCGKLESLPESLGSLK 1234



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 9/100 (9%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +  +P ++  L  L  L L GCK L  LP ++ SL++L+TLNL  CFK E+L E +G 
Sbjct: 1149 TRLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEILGS 1208

Query: 72   VESLEELDISGTAIRCP-----PSSIFLMKNLKTLSFRGC 106
            ++ L+ L++     RC      P S+  +K+L+TL    C
Sbjct: 1209 LKKLQTLNL----FRCGKLESLPESLGSLKHLQTLVLIDC 1244



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 31/191 (16%)

Query: 49  KSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
           K L+ L+L GC   ++    +GQ++ LE L       R  P SI  +  L  L+  G  G
Sbjct: 564 KCLRVLDLSGC-SIKDFASALGQLKQLEVLIAQKLQDRQFPESITRLSKLHYLNLSGSRG 622

Query: 109 PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
                S                      S+  L SL  LDLS C      IP  +G L +
Sbjct: 623 ISEIPS----------------------SVGKLVSLVHLDLSYCT-NVKVIPKALGILRN 659

Query: 169 LKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASL 224
           L+TL LS      +LP S+  + NL++L L +C  L++LP+      +V+ + ++ C  L
Sbjct: 660 LQTLDLSWCEKLESLPESLGSVQNLQRLNLSNCFELEALPESLGSLKDVQTLDLSSCYKL 719

Query: 225 VTL---LGALK 232
            +L   LG+LK
Sbjct: 720 ESLPESLGSLK 730


>gi|224131106|ref|XP_002328455.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838170|gb|EEE76535.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1150

 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 124/245 (50%), Gaps = 40/245 (16%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK--------------- 61
           +P SI  LS LV+L L  C++L  LP NI+ LKSL  L+L  C K               
Sbjct: 600 LPSSIGCLSQLVRLNLSSCESLASLPDNIDELKSLVELDLYSCSKLASLPNSICKLKCLT 659

Query: 62  ---FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
                +L +++G++ SLEELD+S  + +   P+SI  +K+L+ L   GC+G  S      
Sbjct: 660 KLNLASLPDSIGELRSLEELDLSSCSKLASLPNSIGELKSLQWLDLNGCSGLAS------ 713

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
             P N+     +L +L    L+G   L   DL+ C  G  ++PS IG L SLK+L+L   
Sbjct: 714 -LPDNI----GELKSLQWFDLNGCFGLASFDLNGCS-GLASLPSSIGALKSLKSLFL--- 764

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL---LGAL 231
              +   SI+ L +L+ L    C  L SLP       ++E +  +GC+ L +L   +G+L
Sbjct: 765 RVASQQDSIDELESLKSLIPSGCLGLTSLPDSIGALKSLENLYFSGCSGLASLPDNIGSL 824

Query: 232 KLRKS 236
           K  KS
Sbjct: 825 KSLKS 829



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 124/237 (52%), Gaps = 24/237 (10%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            +  +P SI  L  L  L   GC  L  LP NI SLKSLK+L L GC    +L + +G+++
Sbjct: 790  LTSLPDSIGALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELK 849

Query: 74   SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-- 130
            SLE+L+++G   +   P +I  +K+LK L   GC+G  S     LP  I  ++    L  
Sbjct: 850  SLEKLELNGCLGLASLPDNIGTLKSLKWLKLDGCSGLAS-----LPDRIGELKSLKQLYL 904

Query: 131  -GALMLPSLSG----LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
             G   L SL+     L SL +L L+ C  G  ++P  IG L SL+ L L+  +   +LP 
Sbjct: 905  NGCSELASLTDNIGELKSLKQLYLNGCS-GLASLPDRIGELKSLELLELNGCSGLASLPD 963

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNV------EKVRVNGCASLVTL---LGALK 232
            +I+ L  L+KL    C  L  L  LP N+      + ++++GC+ L +L   +G LK
Sbjct: 964  TIDALKCLKKLDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELK 1020



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 34/249 (13%)

Query: 9   LDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET 68
           L K ++  +P SI  L  L +L L  C  L  LP++I  LKSL+ L+L GC    +L + 
Sbjct: 658 LTKLNLASLPDSIGELRSLEELDLSSCSKLASLPNSIGELKSLQWLDLNGCSGLASLPDN 717

Query: 69  VGQVESLEELDISG------------TAIRCPPSSIFLMKNLKTLSFRGCNGPPS----- 111
           +G+++SL+  D++G            + +   PSSI  +K+LK+L  R  +   S     
Sbjct: 718 IGELKSLQWFDLNGCFGLASFDLNGCSGLASLPSSIGALKSLKSLFLRVASQQDSIDELE 777

Query: 112 SASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           S    +P        S  LG   LP S+  L SL  L  S C  G  ++P +IG+L SLK
Sbjct: 778 SLKSLIP--------SGCLGLTSLPDSIGALKSLENLYFSGCS-GLASLPDNIGSLKSLK 828

Query: 171 TLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVT 226
           +L L   +   +L   I  L +LEKL+L  C  L SLP       +++ ++++GC+ L +
Sbjct: 829 SLTLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLPDNIGTLKSLKWLKLDGCSGLAS 888

Query: 227 L---LGALK 232
           L   +G LK
Sbjct: 889 LPDRIGELK 897



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 24/158 (15%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            +  +P +I  L  L  L L GC  L  LP  I  LKSLK L L GC +  +L + +G+++
Sbjct: 985  LASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELK 1044

Query: 74   SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            SL++L ++G + +   P  I  +K+L+ L   GC+G  S     LP  I+ ++       
Sbjct: 1045 SLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLAS-----LPDTIDALK------- 1092

Query: 133  LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                       L KLD   C  G  ++P++IG L SL+
Sbjct: 1093 ----------CLKKLDFFGCS-GLASLPNNIGELESLQ 1119



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 32/236 (13%)

Query: 1    MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
            ++ L++L L+  +++  +  +I  L  L QL L GC  L  LP  I  LKSL+ L L GC
Sbjct: 896  LKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGC 955

Query: 60   FKFENLLETVGQVESLEELDISG----TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC 115
                +L +T+  ++ L++LD  G      +   P +I  +K+LK L   GC+G  S    
Sbjct: 956  SGLASLPDTIDALKCLKKLDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLAS---- 1011

Query: 116  YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
             LP  I  ++    L  L L   S L SLT                +IG L SLK LYL+
Sbjct: 1012 -LPDRIGELK---SLKQLYLNGCSELASLT---------------DNIGELKSLKQLYLN 1052

Query: 176  K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
              +   +LP  I  L +LE L+L  C  L SLP        ++K+   GC+ L +L
Sbjct: 1053 GCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGLASL 1108


>gi|307135798|gb|ADN33677.1| TIR-LRR-NBS disease resistance protein [Cucumis melo subsp. melo]
          Length = 1139

 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 155/351 (44%), Gaps = 59/351 (16%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +K +P S  +L+ L  LTL  C+ L  +P +++S  +L +LN+  C     + E++G 
Sbjct: 593 STLKTLPTSCFMLTSLNTLTLYSCQKLEEVP-DLSSASNLNSLNVEKCTNLRGIHESIGS 651

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           ++ L+ L            SI  +K+LK L    C+   S       FPI          
Sbjct: 652 LDRLQTLVSRKCTNLVKLPSILRLKSLKHLDLSWCSKLES-------FPI---------- 694

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
                    + SL  LDLS   + +  +PS IG L  L  L L    + ++LP +I+ L 
Sbjct: 695 -----IDENMKSLRFLDLSFTAIKD--LPSSIGYLTELPRLNLGNCTSLISLPKTISLLM 747

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLL 250
           +L  L+L +C+ LQ +P LP N++ +   GC  L          KS   I+D +      
Sbjct: 748 SLLDLELRNCRSLQEIPNLPQNIQNLDAYGCELLT---------KSPDNIVDIISQ---- 794

Query: 251 GKNGLAISML-REFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQ 309
            K  L +  + REFL             + G EIPKWF Y+   + ++ +   Y  +M +
Sbjct: 795 -KQDLTLGEISREFL-------------LMGVEIPKWFSYKTTSNLVSASFRHY-SDMER 839

Query: 310 VVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLL 360
            +  AAC  F V   S+  RR        +  HCS    F    S+++WL+
Sbjct: 840 TL--AACVSFKVNGDSS--RRISCNIFICNRFHCSFSRPFLPSKSEYMWLV 886


>gi|451798984|gb|AGF69190.1| TMV resistance protein N-like protein 4 [Vitis labrusca]
          Length = 1049

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 183/444 (41%), Gaps = 88/444 (19%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL L  ++IK++    +L   L  + L    +L+R+P +++S+ +L+ L L GC   E
Sbjct: 609 LVELSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIP-DLSSVPNLEILTLEGCVNLE 667

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L                       P  I+ +K+L+TLS  GC     S     P  +  
Sbjct: 668 LL-----------------------PRGIYKLKHLQTLSCNGC-----SKLERFPEIMAN 699

Query: 124 MR--RSSDLG--ALM-LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           MR  R  DL   A+M LPS ++ L  L  L L +C      IPS I  L SLK L L   
Sbjct: 700 MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECS-KLHQIPSHICYLSSLKKLNLEGG 758

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
           +F ++P +IN L  L+ L L  C  L+ +P+LP  +  + V+ C SL  L     L  SS
Sbjct: 759 HFSSIPPTINQLSRLKALNLSHCNNLEQIPELPSGLINLDVHHCTSLENLSSPSNLLWSS 818

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                       L K   +    R+F   V       + +   + IP+W  +Q  G  IT
Sbjct: 819 ------------LFKCFKSKIQARDFRRPVR------TFIAERNGIPEWICHQKSGFKIT 860

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVP--KHSTGIRRF-----------YRYPHPAHVLHCS 344
           +  P      +  +G+  C ++ VP    +T  R F           Y   H        
Sbjct: 861 MKLPWSWYENDDFLGFVLCSLY-VPLEIETTPHRDFNCKLNFDDDSAYFSCHSHQFCEFC 919

Query: 345 MDEKFGHRGSDHLWLLYLPR----QSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGL 400
            DE    +G     L+Y P+    + Y+ N +W   +  F + F               +
Sbjct: 920 YDEDASSQGC----LIYYPKSNIPEGYHSN-EWRTLNASFNVYF-----------GVKPV 963

Query: 401 KVKRCGFHPGYMHEVEEFDETTKQ 424
           KV RCGFH  Y H+ E+ + T  Q
Sbjct: 964 KVARCGFHFLYAHDYEQNNLTIVQ 987



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++PS+I  L SLK LNL G  
Sbjct: 700 MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEGG- 758

Query: 61  KFENLLETVGQVESLEELDIS 81
            F ++  T+ Q+  L+ L++S
Sbjct: 759 HFSSIPPTINQLSRLKALNLS 779


>gi|224150150|ref|XP_002336911.1| predicted protein [Populus trichocarpa]
 gi|222837116|gb|EEE75495.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 33/312 (10%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
           GC +L  LP +I ++KSL+TLN+ GC + E L E +G +ESL EL   G       SSI 
Sbjct: 1   GCWSLKTLPESIGNVKSLETLNISGCSQLEKLPERMGDMESLTELLADGIENEQFLSSIG 60

Query: 94  LMKNLKTLSF-RGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG--SLTKLDLS 150
            +K+++ LS  R  + PPSS+          +  +  L     P  S +   S+ +L+LS
Sbjct: 61  QLKHVRRLSLCRNRSAPPSSS----------LISAGVLNWKRWPPTSFIEWISVKRLELS 110

Query: 151 DCGLGEGAIP-SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           + GL + A    D   L +L+ L L  N F +LP+ +  L  L  L ++ CK L S+P L
Sbjct: 111 NGGLSDRATNCVDFRGLSALEHLDLDGNKFSSLPSGLGFLPKLRWLSVQACKYLVSIPDL 170

Query: 210 PPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSL-KLLGKNGLAISML-------- 260
           P +++ +    C SL  +    + +K     ++   SL ++ G  GL+ S          
Sbjct: 171 PSSLDFLFAAHCKSLKRVRIPSEPKKELYIGLENSHSLEEIQGIEGLSNSFWYIRVDKHN 230

Query: 261 -------REFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
                  +  +E      +++ I     ++P W  Y  EG  ++   P        +V +
Sbjct: 231 NSPNKLPKNVIEAFCNGCYRYFIYCLPGKMPNWMSYSGEGCPLSFHIPPVF---QGLVVW 287

Query: 314 AACRVFHVPKHS 325
             C +  V +HS
Sbjct: 288 FVCSLEKVHRHS 299


>gi|297741887|emb|CBI33322.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 84/168 (50%), Gaps = 22/168 (13%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC NL  LP  I  LK L+TL+  GC K E   +  G +  L  LD+SG AI   P
Sbjct: 51  LTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPKIKGNMGKLRVLDLSGIAIMDLP 110

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
           SSI  +  L+TL    C       S     PI++                 L SL  LDL
Sbjct: 111 SSISHLNGLQTLLLEDC-------SKLHKIPIHICH---------------LSSLEVLDL 148

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            +C + EG IPSDI +L SL+ L L   +F  +PA+IN L  L+ L L
Sbjct: 149 GNCNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNL 196


>gi|51477385|gb|AAU04758.1| MRGH10 [Cucumis melo]
          Length = 944

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 113/222 (50%), Gaps = 34/222 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL +D T I E+  SI+ L GLV L L  C  L  LP+ I SL SLKTL L GC 
Sbjct: 706 MGYLTELHIDGTSINELSPSIKNLLGLVLLNLGNCIRLSSLPTEIGSLSSLKTLILNGCK 765

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L  ++  V+ LEELDI GT+I    S+I  ++NL+ L+                  
Sbjct: 766 NLHKLPPSLEYVKPLEELDIGGTSI----STIPFVENLRILN------------------ 803

Query: 121 INLMRRSSDLGALMLPSLSGL-----GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
                    L +++  SL+ L      SL  L+LSDC L +  IPSD+    SL+ L L 
Sbjct: 804 ------CERLKSIIWHSLASLPTEYFSSLKDLNLSDCNLVDEDIPSDLELFSSLEILDLG 857

Query: 176 KNNF-VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            N+F  T+  ++N L  L+   L DC +L+ LP+LP ++  V
Sbjct: 858 SNHFEKTVRKALNNLLPLKYCTLNDCHKLKQLPKLPQSIRYV 899


>gi|356573485|ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1134

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 122/293 (41%), Gaps = 54/293 (18%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L+  GC  LV  P     L SL+ LNL  C   E+  E +G++E++ EL 
Sbjct: 738 SIGFLYKLKILSAFGCTKLVSFPPI--KLTSLEKLNLSRCHSLESFPEILGKMENIRELQ 795

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL------GAL 133
              T+I+  PSSI  +  L+ L    C          LP  I +M   ++L      G  
Sbjct: 796 CEYTSIKELPSSIHNLTRLQELQLANC------GVVQLPSSIVMMPELTELIGWKWKGWQ 849

Query: 134 MLPSLSG---LGSL---TKLDL---SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
            L    G    GS    +K++L   SDC L +            +K L LSKNNF  LP 
Sbjct: 850 WLKQEEGEEKFGSSIVSSKVELLWASDCNLYDDFFSIGFTRFAHVKDLNLSKNNFTMLPE 909

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
            I     L KL + DCK LQ +  +PP+++      C SL +         SS ++    
Sbjct: 910 CIKEFQFLRKLNVNDCKHLQEIRGIPPSLKHFLATNCKSLTS---------SSTSM---- 956

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                             FL      + K    +PG  IP+WF +Q+ G SI+
Sbjct: 957 ------------------FLNQELHETGKTQFYLPGERIPEWFDHQSRGPSIS 991


>gi|297789019|ref|XP_002862524.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308097|gb|EFH38782.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1091

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 36/312 (11%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +KE+P  ++ +  LV L L+GC +L+ LP    ++ SLKTL L  C KF+   E + +
Sbjct: 662 TSLKELPEEMQKMKKLVSLNLRGCTSLLSLPKI--TMDSLKTLILSCCSKFQTF-EVISK 718

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
              LE L ++ TAI   P +I  +  L  L  + C    +   C        + +   L 
Sbjct: 719 --HLETLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDC--------LWKMKSLQ 768

Query: 132 ALMLPSLSGLGSL-----TKLDLSDCGLGEGAIP---SDIGNLHSLKTLYLSKNNFV-TL 182
            L L   S L S      T ++L    L   +IP   S I +   L+ L LS+N  + +L
Sbjct: 769 ELKLSGCSKLKSFPNVKETMVNLRILLLDGTSIPLMPSKIFDSSFLRRLCLSRNEEICSL 828

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSS 237
              ++ LF+L+ L+L+ CK L SLP+LPPN+  +  +GC+SL T+   L       +  S
Sbjct: 829 LFDMSQLFHLKWLELKYCKNLTSLPKLPPNLLCLNAHGCSSLRTVASPLASLMPTEQIHS 888

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV--------VPGSEIPKWFMY 289
             I+     L+ + K+ + IS +++  +++S   H    V         PG ++P WF +
Sbjct: 889 TFILTDCHKLEQVSKSAI-ISYIQKKSQLMSNDRHSQDFVFKSLIGTCFPGCDVPVWFNH 947

Query: 290 QNEGSSITVTRP 301
           Q  GS + +  P
Sbjct: 948 QALGSVLKLELP 959



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 50/90 (55%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L L+ T I E+P +I  L GL+ L LK CKNL  LP  +  +KSL+ L L GC K +
Sbjct: 720 LETLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLWKMKSLQELKLSGCSKLK 779

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIF 93
           +       + +L  L + GT+I   PS IF
Sbjct: 780 SFPNVKETMVNLRILLLDGTSIPLMPSKIF 809


>gi|357471111|ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355506895|gb|AES88037.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1264

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 148/340 (43%), Gaps = 40/340 (11%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++ +  SI  L  LV L L  CKNL  L SN   L SL+ L L GC    +L E     E
Sbjct: 666 LRHVHASILSLQKLVNLNLVWCKNLKSLLSN-TPLNSLRILELYGC---SSLKEFSVTSE 721

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDL 130
            +  LD+  TAI   P S+  +  L  L    C      P+  SC       ++   + L
Sbjct: 722 EMTYLDLRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLL 781

Query: 131 GALMLPSL-SGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
               L  L  GL SL  L L +C  L E  +P +I  L SL  L LS +N   +P SI  
Sbjct: 782 DTSNLHLLFDGLRSLGYLCLDNCCNLTE--LPHNISLLSSLYYLSLSGSNVKNIPKSIKH 839

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL---GALKLRKSSCTIIDFVD 245
           L  LE L L  C  +Q LP+LPP++E + V  C SL T+       +L +     I F +
Sbjct: 840 LSQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKN 899

Query: 246 SLKL--LGKNGLAISM---LREFL---------------------EVVSAPSHKFSIVVP 279
            ++L    +NG+ +     L+E                       E  S+  H  +++ P
Sbjct: 900 CVELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICP 959

Query: 280 GSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
           GS +P WF Y++  +SIT+         + + G+  C + 
Sbjct: 960 GSRVPDWFHYRSTEASITIELSVSHSPQSNIFGFIFCLIL 999


>gi|147778859|emb|CAN73697.1| hypothetical protein VITISV_038484 [Vitis vinifera]
          Length = 784

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 107/236 (45%), Gaps = 52/236 (22%)

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
           C + +GA    +G L SL+ L LS+NNFVTLP++I  L  L+ L LE+CKRLQ+LP+LP 
Sbjct: 555 CNISDGATLDSLGFLSSLEDLDLSENNFVTLPSNIXRLPXLKMLGLENCKRLQALPELPT 614

Query: 212 NVEKVRVNGCASLVT--------LLGALKLRKS-SCTIIDFVDSLKLLGKNGLAISMLRE 262
           ++  +    C SL T        LL  ++L++   C I           ++GL +  L  
Sbjct: 615 SIRSIMARNCTSLETISNQSFGSLLMTVRLKEHIYCPI----------NRDGLLVPAL-- 662

Query: 263 FLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVP 322
                       S V  GS IP W  YQ+ G  +    P    B N  +G A C V  VP
Sbjct: 663 ------------SAVXFGSRIPDWIRYQSSGXEVKAELPPNWFBSN-FLGLALC-VVTVP 708

Query: 323 KH-----STGIRRFYR-----YPHPAH------VLHCSMDEKFGHRGSDHLWLLYL 362
           +      +     F+R     Y    H      V  C    K G   SDHLWL+Y+
Sbjct: 709 RXGLVSLADFFGLFWRSCTLFYSTSNHASSSLGVYTCPNHLK-GKVESDHLWLVYV 763


>gi|342365838|gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 139/316 (43%), Gaps = 32/316 (10%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+ L   LV+L L GC ++  L   +  + SL+TL L  C +   L E    ++ L  L 
Sbjct: 1513 SLALHKSLVELNLTGCYSIETLADKLE-MCSLETLGLDCCTRLRRLPEFGECMKQLSILI 1571

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
            ++ T I   P+++  +  +  L   GC+   S     LP     +++    G + L  L 
Sbjct: 1572 LTYTDIEEVPTTLGNLAGVSELDLTGCDKLTS-----LPLTGCFLKKLELHGFVELSCLP 1626

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
                  KL+       E  +  D+G+L  L  L LS N F+ +P SI+ L  L  LKL  
Sbjct: 1627 HEAPSLKLEGCFSTSKESTLYCDLGHLAQLTNLDLSDNCFIRVPISIHQLPRLTCLKLSF 1686

Query: 200  CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISM 259
            C  L+ LP+LP ++ ++   GC SL        + K+ C               G A S 
Sbjct: 1687 CDELEVLPELPSSLRELHAQGCDSLDASNVDDVISKACC---------------GFAESA 1731

Query: 260  LREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
             ++  +V+        +++ G EIP WF +Q E   ++V+ P   C   ++V  A C +F
Sbjct: 1732 SQDREDVL-------QMLITGEEIPGWFEHQEEDEGVSVSFP-LNCPSTEMVALALCFLF 1783

Query: 320  HVPKHSTGIRRFYRYP 335
               K   G R F  YP
Sbjct: 1784 ERTK---GYRTFTFYP 1796


>gi|147845097|emb|CAN78476.1| hypothetical protein VITISV_009816 [Vitis vinifera]
          Length = 826

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 64/107 (59%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L EL L+ T I E+P S+  L GLV L +K CKNL  LP  I  LKSLKTL L GC 
Sbjct: 701 MESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICDLKSLKTLILSGCS 760

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           K E L E    +E LEEL + GT+IR  P SI  +K L  L+ R C 
Sbjct: 761 KLERLPEITEVMEHLEELLLDGTSIRELPRSILRLKGLVLLNLRKCK 807



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 67/158 (42%), Gaps = 23/158 (14%)

Query: 49  KSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
           K L+ LNL GC + E   +    +ESL EL + GTAI   PSS+  ++ L  L+ + C  
Sbjct: 678 KKLEVLNLSGCSRLEKFPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKN 737

Query: 109 PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
                   LP       R  DL +L    LSG   L +L            P     +  
Sbjct: 738 LK-----ILP------GRICDLKSLKTLILSGCSKLERL------------PEITEVMEH 774

Query: 169 LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           L+ L L   +   LP SI  L  L  L L  CK L++L
Sbjct: 775 LEELLLDGTSIRELPRSILRLKGLVLLNLRKCKELRTL 812



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKS 50
           ME L ELLLD T I+E+P SI  L GLV L L+ CK L  L ++I  LKS
Sbjct: 772 MEHLEELLLDGTSIRELPRSILRLKGLVLLNLRKCKELRTLRNSICGLKS 821



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 32/198 (16%)

Query: 37  NLVRLPSNINSLK----SLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSI 92
           +L  LPSN N  K    SLK  +L   +K    LE +     + +L  S   + CP  S 
Sbjct: 593 SLESLPSNFNGKKLVELSLKHSSLNHLWKGNKCLENL----KVMDLSHSXYLVECPDVSG 648

Query: 93  FLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
               +L+TL+  GC      AS        L  ++  +G            L  L+LS C
Sbjct: 649 --APSLETLNLYGCTSLREDAS--------LFSQNHWIGK----------KLEVLNLSGC 688

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
              E   P    N+ SL  L+L     + LP+S+  L  L  L ++ CK L+ LP    +
Sbjct: 689 SRLE-KFPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICD 747

Query: 213 VEKVR---VNGCASLVTL 227
           ++ ++   ++GC+ L  L
Sbjct: 748 LKSLKTLILSGCSKLERL 765


>gi|357515077|ref|XP_003627827.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355521849|gb|AET02303.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1266

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 148/340 (43%), Gaps = 40/340 (11%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++ +  SI  L  LV L L  CKNL  L SN   L SL+ L L GC    +L E     E
Sbjct: 666 LRHVHASILSLQKLVNLNLVWCKNLKSLLSN-TPLNSLRILELYGC---SSLKEFSVTSE 721

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDL 130
            +  LD+  TAI   P S+  +  L  L    C      P+  SC       ++   + L
Sbjct: 722 EMTYLDLRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLL 781

Query: 131 GALMLPSL-SGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
               L  L  GL SL  L L +C  L E  +P +I  L SL  L LS +N   +P SI  
Sbjct: 782 DTSNLHLLFDGLRSLGYLCLDNCCNLTE--LPHNISLLSSLYYLSLSGSNVKNIPKSIKH 839

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL---GALKLRKSSCTIIDFVD 245
           L  LE L L  C  +Q LP+LPP++E + V  C SL T+       +L +     I F +
Sbjct: 840 LSQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKN 899

Query: 246 SLKL--LGKNGLAISM---LREFL---------------------EVVSAPSHKFSIVVP 279
            ++L    +NG+ +     L+E                       E  S+  H  +++ P
Sbjct: 900 CVELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICP 959

Query: 280 GSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
           GS +P WF Y++  +SIT+         + + G+  C + 
Sbjct: 960 GSRVPDWFHYRSTEASITIELSVSHSPQSNIFGFIFCLIL 999


>gi|280967725|gb|ACZ98531.1| ARGH17 [Malus x domestica]
          Length = 1056

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 137/286 (47%), Gaps = 41/286 (14%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
           GC+ L  LP +    KS++TL L  C +F  + E +G++ SL  L+   TAIR  P+SI 
Sbjct: 662 GCRMLTSLPRDFYKSKSVETLCLNDCSEFREVHEDLGEMISLRILEADFTAIRQIPTSIV 721

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GALMLPSLSGLGSLTKLDLS 150
            +KNL  LS              L  PI   RR S L     + LP+     SL +L LS
Sbjct: 722 RLKNLTRLS--------------LINPI--FRRGSSLIGVEGIHLPN-----SLRELSLS 760

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP 210
            C L + AI  ++G+L SL+ L L  N F TLP S++ L  LE L+L  C  L ++P L 
Sbjct: 761 VCKLDDDAI-KNLGSLISLQYLDLGWNKFHTLP-SLSGLSKLETLQLSGCMYLHTIPDLL 818

Query: 211 PNVEKVRVNGCASLVT------LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISM----- 259
            N++ + V+ C +L T      +    +L  S    +  V SL     + + I M     
Sbjct: 819 TNLKVLHVDECPALETMPNFSEMSNIRQLHVSHSPKLTEVPSLDKSLNSMIWIDMHECTN 878

Query: 260 -LREFLEVV--SAPSHKF-SIVVPGSEIPKWFMYQNEGSSITVTRP 301
              +F + +     S  F  I + G+ +P WF + NEG+ ++   P
Sbjct: 879 LTADFRKNILQGWTSCGFGGIALHGNYVPDWFEFVNEGAKVSFDIP 924


>gi|296083367|emb|CBI23256.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 24/230 (10%)

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           EG I + + +L  L+ L LS+N  V++PA I+ L NL+ L +  C++LQ +P+LPPN++ 
Sbjct: 2   EGTIDNKLCHLELLEVLNLSRNYMVSIPADISRLSNLKVLLVRQCEKLQKIPKLPPNIKL 61

Query: 216 VRVNGCASLVTL-----LGALKLRKSSCTI--IDFVDSLKLLGKNGLA---ISMLREFLE 265
           +    C SL +L     + +L+ R  S  +  ++F+    L   +GL    ++M  E L 
Sbjct: 62  LDACDCTSLRSLSTPSWMISLQHRLVSTWLRPVEFM----LWNCSGLYQDHVAMALETLH 117

Query: 266 VVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSYLCNMNQVVGYAACRVFHVPKH 324
               P   +SI++PGS IPK   ++N G+S++ T RP +L   N  +G A C VF + + 
Sbjct: 118 QKLFPEIGYSILIPGSRIPKGRWHENMGASVSATLRPHWL--DNNFLGVALCAVFALEEG 175

Query: 325 ST-----GIRRFYRYPHPAHVLHCSMDEKFGHR--GSDHLWLLYLPRQSY 367
            T      IR  +      +  H       G R   +DH+ ++Y PR  +
Sbjct: 176 ETIQRPGEIRCIFECGEGPYFSHSITWTHSGDRVVETDHVCMMYQPRSQF 225



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 38/263 (14%)

Query: 170 KTLYLSKNNF-VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
           K+ Y S  N+ V++PA I+ L NL+ L +  C++LQ +P+LPP+++ +    C SL++L 
Sbjct: 229 KSTYASVRNYMVSIPADISKLSNLKVLLVRQCEQLQKIPKLPPSIKLLDACDCTSLMSLP 288

Query: 229 GALKLRKSSCTIID-FVDSLKLLGKN--GLA---ISMLREFLEVVSAPSHKFSIVVPGSE 282
              ++      ++  ++  ++ +  N  GL    ++M  E L     P   +SI++PGS 
Sbjct: 289 TPSRIISPQHWLVSTWLRPVEFMLWNCSGLYQDHVAMALEKLHQKLFPEIGYSILIPGSR 348

Query: 283 IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHV-- 340
           IPKW  ++N G+S++ T P    + N ++G A C VF +    T I+R      P  +  
Sbjct: 349 IPKWAWHENMGASVSATLPPDWLDDN-LLGIALCGVFALEAGET-IQR------PGGICC 400

Query: 341 -LHCSMDEKFGHRGS-----------DHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDER 388
              C     F H  S           DH+W++Y PR  +  +        H +  F    
Sbjct: 401 NFECREGPYFSHSISWTHSGDRVVETDHVWMVYQPRTQFVKSKSICARFKHIKAYF---- 456

Query: 389 EKHCPAGSGTGLKVKRCGFHPGY 411
                + SG   +VK+C     Y
Sbjct: 457 -----SLSGASHEVKKCAIRLIY 474


>gi|9759605|dbj|BAB11393.1| disease resistance protein RPS4 [Arabidopsis thaliana]
          Length = 1232

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 151/343 (44%), Gaps = 67/343 (19%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +K +P  ++ +  L+ L L+GC +L  LP    +L  L+TL L  C +F+   E    
Sbjct: 696  TGLKTLPQVLQNMESLMFLNLRGCTSLESLPDI--TLVGLRTLILSNCSRFK---EFKLI 750

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
             ++LEEL + GTAI+  PS+I  ++ L +L  + C               NL        
Sbjct: 751  AKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCK--------------NL-------- 788

Query: 132  ALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS--------------- 175
             L LP S+  L ++ ++ LS C   E + P    NL  LKTL L                
Sbjct: 789  -LSLPDSIGNLKAIQEIILSGCSSLE-SFPEVNQNLKHLKTLLLDGTAIKKIPELSSVRR 846

Query: 176  ----KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL---- 227
                 N F  LP SI  L++L  L L+ CK L S+P LPPN++ +  +GC SL T+    
Sbjct: 847  LSLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCISLETISILS 906

Query: 228  --LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS---------- 275
              L A      S  I      L  + +N +  S  R+ ++++S    ++           
Sbjct: 907  DPLLAETEHLHSTFIFTNCTKLYKVEENSIE-SYPRKKIQLMSNALARYEKGLALDVLIG 965

Query: 276  IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            I  PG ++P WF ++  G  +    P +  N   + G A C V
Sbjct: 966  ICFPGWQVPGWFNHRTVGLELKQNLPRH-WNAGGLAGIALCAV 1007



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 53/86 (61%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL LD T IKE+P +I  L  L+ L LK CKNL+ LP +I +LK+++ + L GC   E
Sbjct: 754 LEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSLE 813

Query: 64  NLLETVGQVESLEELDISGTAIRCPP 89
           +  E    ++ L+ L + GTAI+  P
Sbjct: 814 SFPEVNQNLKHLKTLLLDGTAIKKIP 839


>gi|224284598|gb|ACN40032.1| unknown [Picea sitchensis]
          Length = 1071

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 10/235 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L +++L    +  +P S+  L+GL  L L GC  L  LP ++ +L  L+ L+L  C 
Sbjct: 661 LKYLEKIVLYNGSMTLLPDSVGHLTGLQTLDLIGCSTLQMLPDSVGNLTGLQKLDLSWCS 720

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCY 116
             + L ++VG +  L+ L +   + ++  P S+  +  L+TL    C+     P S    
Sbjct: 721 TLQMLPDSVGNLTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDLIECSTLQTLPDSVGNL 780

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
                  + R S L  L   S+  L  L  L LS C   +  +P  +GNL  L+TLYLS 
Sbjct: 781 TGLQTLYLSRCSTLQTLP-DSVGNLTGLQTLYLSGCSTLQ-TLPDSVGNLTGLQTLYLSG 838

Query: 177 -NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
            +   TLP S+  L  L+ L L+ C  LQ+LP L  N++ ++   ++GC++L TL
Sbjct: 839 CSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKSLQTLDLDGCSTLQTL 893



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 30/226 (13%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L++ + ++ +P S+  L+GL  L L  C  L  LP ++ +L  L+TL L GC   + L +
Sbjct: 764 LIECSTLQTLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPD 823

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           +VG +  L+ L +SG + ++  P S+  +  L+TL+   C+   +               
Sbjct: 824 SVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQT--------------- 868

Query: 127 SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
                   LP L G L SL  LDL  C   +  +P  +GNL  L+TL LS  +   TLP 
Sbjct: 869 --------LPDLVGNLKSLQTLDLDGCSTLQ-TLPDSVGNLTGLQTLNLSGCSTLQTLPD 919

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           S   L  L+ L L  C  LQ+LP    N   ++ + + GC++L TL
Sbjct: 920 SFGNLTGLQTLNLIGCSTLQTLPDSFGNLTGLQTLNLIGCSTLQTL 965



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 20/248 (8%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            ++ +P S+  L+GL  L L GC  L  LP ++ +L  L+TLNL  C   + L + VG ++
Sbjct: 818  LQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLK 877

Query: 74   SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSS 128
            SL+ LD+ G + ++  P S+  +  L+TL+  GC+     P S  +      +NL+  S+
Sbjct: 878  SLQTLDLDGCSTLQTLPDSVGNLTGLQTLNLSGCSTLQTLPDSFGNLTGLQTLNLIGCST 937

Query: 129  DLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL----SKNNFVTLP 183
                  LP S   L  L  L+L  C   +  +P  +GNL  L+ LYL    +     TLP
Sbjct: 938  ---LQTLPDSFGNLTGLQTLNLIGCSTLQ-TLPDSVGNLTGLQILYLGGCFTLQTLQTLP 993

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
              +  L  L+ L L+    LQ LP    N+  ++       +TL GA   R+S    +  
Sbjct: 994  DLVGTLTGLQTLYLDGYSTLQMLPDSIWNLMGLKR------LTLAGATLCRRSQVGNLTG 1047

Query: 244  VDSLKLLG 251
            + +L L G
Sbjct: 1048 LQTLHLTG 1055



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 42/225 (18%)

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCY------ 116
           E++G ++ LE++ +   ++   P S+  +  L+TL   GC+     P S  +        
Sbjct: 656 ESIGTLKYLEKIVLYNGSMTLLPDSVGHLTGLQTLDLIGCSTLQMLPDSVGNLTGLQKLD 715

Query: 117 LPFPINLMRRSSDLGAL---------------MLP-SLSGLGSLTKLDLSDCGLGEGAIP 160
           L +   L      +G L                LP S+  L  L  LDL +C   +  +P
Sbjct: 716 LSWCSTLQMLPDSVGNLTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDLIECSTLQ-TLP 774

Query: 161 SDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKV 216
             +GNL  L+TLYLS+ +   TLP S+  L  L+ L L  C  LQ+LP    N   ++ +
Sbjct: 775 DSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTL 834

Query: 217 RVNGCASLVTL---------LGALKLRKSSC--TIIDFVDSLKLL 250
            ++GC++L TL         L  L L + S   T+ D V +LK L
Sbjct: 835 YLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKSL 879


>gi|147774849|emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 138/314 (43%), Gaps = 38/314 (12%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL------------ 54
            L LD T I ++P  I  L  L +L ++ CK L  LP  I S+ SL TL            
Sbjct: 958  LQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPE 1017

Query: 55   -----------NLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
                       NL  C +   L  ++G ++SL  L +  TA+R  P S  ++ +L  L  
Sbjct: 1018 SIGKLENLIMLNLNKCKRLRRLPGSIGXLKSLHHLXMEETAVRQLPESFGMLTSLMRLLM 1077

Query: 104  RGCNGPPSSASCYL-PFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPS 161
                 P       L P    ++    +   ++LP S S L  L +LD     +  G IP 
Sbjct: 1078 --AKRPHLELPQALGPTETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKIS-GKIPD 1134

Query: 162  DIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
            D   L SL+ L L +NNF +LP+S+  L  L KL L  C+ L++LP LP ++ +V    C
Sbjct: 1135 DFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANC 1194

Query: 222  ASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLA-ISMLREFL-------EVVSAPSHK 273
             +L  +     L   S   ++  +  KL+   G+  +  L+ F            A  + 
Sbjct: 1195 YALEVISDLSNLE--SLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVALKNL 1252

Query: 274  FSIVVPGSEIPKWF 287
             ++ +PGS IP WF
Sbjct: 1253 RTLSIPGSNIPDWF 1266



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 100/210 (47%), Gaps = 12/210 (5%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  +  L+ L L  CKNLV  PS+++ LK+L TL L GC K + L E +  ++SL EL 
Sbjct: 759 SIGDIISLLHLDLSECKNLVEFPSDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELL 818

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL--MLPS 137
           + GT I   P S+  +  L+ LS   C       +C      +L   S +  AL  +  S
Sbjct: 819 LDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLE-SLRELSFNDSALEEIPDS 877

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
              L +L +L L  C     AIP  + NL  L    ++ +    LPASI  L NL+ L +
Sbjct: 878 FGSLTNLERLSLMRCQ-SIYAIPDSVXNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSV 936

Query: 198 EDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
             C+ L  LP          + G AS+V L
Sbjct: 937 GXCRFLSKLP--------ASIEGLASMVXL 958



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 25/231 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKT------- 53
            M+ LRELLLD T I+++P S+  L+ L +L+L  C++L +LP+ I  L+SL+        
Sbjct: 811  MKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSA 870

Query: 54   ----------------LNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                            L+L+ C     + ++V  ++ L E  ++G+ +   P+SI  + N
Sbjct: 871  LEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVXNLKLLTEFLMNGSPVNELPASIGSLSN 930

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
            LK LS   C       +        +  +      + LP  + GL +L +L++  C   E
Sbjct: 931  LKDLSVGXCRFLSKLPASIEGLASMVXLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLE 990

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
             ++P  IG++ SL TL +       LP SI  L NL  L L  CKRL+ LP
Sbjct: 991  -SLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLP 1040


>gi|105922664|gb|ABF81429.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1107

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 136/321 (42%), Gaps = 57/321 (17%)

Query: 97  NLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           NL+ L   GC       PS A       +NL+   S     +LPS   + SL    L  C
Sbjct: 666 NLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQS---IRILPSNLEMESLKVFTLDGC 722

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
              E   P  +GN++ L  L L       L +SI  L  L  L + +CK L+S+P     
Sbjct: 723 SKLE-RFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIP----- 776

Query: 213 VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
                    +S+  L    KL  S C+      +LK + +N   +  L EF +  S P  
Sbjct: 777 ---------SSIGCLKSLKKLDLSCCS------ALKNIPENLGKVESLEEF-DGFSNPRP 820

Query: 273 KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
            F I VPG+EIP WF ++++GSSI+V  PS        +G+ AC  F+    S  +   +
Sbjct: 821 GFGIAVPGNEIPGWFNHRSKGSSISVQVPS------GRMGFFACVAFNANDESPSLFCHF 874

Query: 333 R------YPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSFM 385
           +      YP P     C   E  GH  SDH+WL YL         +W  ES ++  LSF 
Sbjct: 875 KANGRENYPSPM----CINFE--GHLFSDHIWLFYLSFDYLKELQEWQHESFSNIELSFH 928

Query: 386 DEREKHCPAGSGTGLKVKRCG 406
              +         G+KV  CG
Sbjct: 929 SYEQ---------GVKVNNCG 940



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 50/79 (63%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD T I E+  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L  C 
Sbjct: 735 MNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLKSLKKLDLSCCS 794

Query: 61  KFENLLETVGQVESLEELD 79
             +N+ E +G+VESLEE D
Sbjct: 795 ALKNIPENLGKVESLEEFD 813



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 74/171 (43%), Gaps = 31/171 (18%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L  L+L+  T + E+  S+     L  + L  C+++  LPSN+  ++SLK   L GC K 
Sbjct: 667 LENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLE-MESLKVFTLDGCSKL 725

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPF 119
           E   + VG +  L  L + GT I    SSI  +  L  LS   C      PSS  C    
Sbjct: 726 ERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGC---- 781

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                                L SL KLDLS C   +  IP ++G + SL+
Sbjct: 782 ---------------------LKSLKKLDLSCCSALKN-IPENLGKVESLE 810


>gi|296089535|emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 67/113 (59%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L EL LD + I E+P SI  L+GLV L LK CK L  LP +   L SL TL L GC 
Sbjct: 573 MESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCS 632

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
           + + L + +G ++ L EL+  G+ I+  P SI L+ NL+ LS  GC G  S +
Sbjct: 633 ELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDSKS 685



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 27/200 (13%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LR L+L   T + E+  SI  L  L+ L L+GCK L    S+I+ ++SL+ L L GC K 
Sbjct: 505 LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCSKL 563

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +   E    +ESL EL + G+ I   PSSI  +  L  L+ + C    S    +      
Sbjct: 564 KKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFC----- 618

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNFVT 181
                          L+ LG+LT      CG  E   +P D+G+L  L  L    +    
Sbjct: 619 --------------ELTSLGTLTL-----CGCSELKELPDDLGSLQCLAELNADGSGIQE 659

Query: 182 LPASINCLFNLEKLKLEDCK 201
           +P SI  L NL+KL L  CK
Sbjct: 660 VPPSITLLTNLQKLSLAGCK 679



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 18/179 (10%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCF-KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMK 96
           L   PSN +  K L  LN+  CF + + L E     E L+ + +S +           + 
Sbjct: 447 LKSFPSNFHPEK-LVELNM--CFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVP 503

Query: 97  NLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG---LGSLTKLDL 149
           NL+ L  +GC       PS  +      +NL       G   L S S    + SL  L L
Sbjct: 504 NLRRLILKGCTSLVEVHPSIGALKKLIFLNLE------GCKKLKSFSSSIHMESLQILTL 557

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           S C   +   P    N+ SL  L+L  +  + LP+SI CL  L  L L++CK+L SLPQ
Sbjct: 558 SGCSKLK-KFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQ 615


>gi|15223444|ref|NP_174038.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332192670|gb|AEE30791.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1556

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 34/319 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L +L LD T I+ +P  I  L  + QL L+ CK+L  LP  I  + +L +LNL+G  
Sbjct: 1078 LNSLLQLQLDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGS- 1136

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRG---CNGPPSSASC- 115
              E L E  G++E+L EL ++    ++  P S   +K+L  L  +       P S  +  
Sbjct: 1137 NIEELPEEFGKLENLVELRMNNCKMLKRLPKSFGDLKSLHRLYMQETLVAELPESFGNLS 1196

Query: 116  ------YLPFPINLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSD 162
                   L  P+  +  S+  G    P       S S L  L +LD     +  G IP D
Sbjct: 1197 NLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDD 1255

Query: 163  IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
            +  L  L  L L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C 
Sbjct: 1256 LEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCF 1315

Query: 223  SL--------VTLLGALKLRKSSCTI----IDFVDSLKLLGKNGLAISMLREFLEVVSAP 270
            SL        +T+L  L L   +  +    ++ + +LK L   G   +      + +S  
Sbjct: 1316 SLESVSDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKA 1375

Query: 271  SHKF--SIVVPGSEIPKWF 287
            S K   ++ +PG+ +P WF
Sbjct: 1376 SLKMMRNLSLPGNRVPDWF 1394



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 29/234 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN----------------------- 37
            M CL+ELLLD T I  +P SI  L  L +L+L GC++                       
Sbjct: 937  MPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTA 996

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP---SSIFL 94
            L  LPS+I  LK+L+ L+L+ C     + ET+ ++ SL+EL I+G+A+   P    S+  
Sbjct: 997  LRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSLLC 1056

Query: 95   MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
            + +L     +     PSS    L   + L   S+ + AL    +  L  + +LDL +C  
Sbjct: 1057 LTDLSAGDCKFLKQVPSSIGG-LNSLLQLQLDSTPIEALP-EEIGDLHFIRQLDLRNCK- 1113

Query: 155  GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
               A+P  IG + +L +L L  +N   LP     L NL +L++ +CK L+ LP+
Sbjct: 1114 SLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLKRLPK 1167



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 5/208 (2%)

Query: 3    CLRELLLDKTDI-KEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
             L +L+L++ ++  ++P S+  L  L+QL L+ C +L     +++ LK L+   L GC  
Sbjct: 867  ALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSN 926

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC--YLPF 119
               L E +G +  L+EL + GTAI   P SIF ++ L+ LS  GC       SC  YL  
Sbjct: 927  LSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTS 986

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              +L    + L  L   S+  L +L KL L  C      IP  I  L SLK L+++ +  
Sbjct: 987  LEDLYLDDTALRNLP-SSIGDLKNLQKLHLMRCT-SLSTIPETINKLMSLKELFINGSAV 1044

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLP 207
              LP     L  L  L   DCK L+ +P
Sbjct: 1045 EELPIETGSLLCLTDLSAGDCKFLKQVP 1072



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 26/137 (18%)

Query: 96  KNLKTLSFRGCNG----PPSSASCYLP--------FPINLMRRSSDLGALM--------- 134
           +NLK ++ RGC+G    P  S    L           + + R   +LG L+         
Sbjct: 843 ENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSS 902

Query: 135 ----LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
               L  +SGL  L K  LS C      +P +IG++  LK L L       LP SI  L 
Sbjct: 903 LSEFLGDVSGLKCLEKFFLSGCS-NLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQ 961

Query: 191 NLEKLKLEDCKRLQSLP 207
            LEKL L  C+ ++ LP
Sbjct: 962 KLEKLSLMGCRSIEELP 978


>gi|10121909|gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 34/319 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L +L LD T I+ +P  I  L  + QL L+ CK+L  LP  I  + +L +LNL+G  
Sbjct: 1112 LNSLLQLQLDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGS- 1170

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRG---CNGPPSSASC- 115
              E L E  G++E+L EL ++    ++  P S   +K+L  L  +       P S  +  
Sbjct: 1171 NIEELPEEFGKLENLVELRMNNCKMLKRLPKSFGDLKSLHRLYMQETLVAELPESFGNLS 1230

Query: 116  ------YLPFPINLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSD 162
                   L  P+  +  S+  G    P       S S L  L +LD     +  G IP D
Sbjct: 1231 NLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDD 1289

Query: 163  IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
            +  L  L  L L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C 
Sbjct: 1290 LEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCF 1349

Query: 223  SL--------VTLLGALKLRKSSCTI----IDFVDSLKLLGKNGLAISMLREFLEVVSAP 270
            SL        +T+L  L L   +  +    ++ + +LK L   G   +      + +S  
Sbjct: 1350 SLESVSDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKA 1409

Query: 271  SHKF--SIVVPGSEIPKWF 287
            S K   ++ +PG+ +P WF
Sbjct: 1410 SLKMMRNLSLPGNRVPDWF 1428



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 29/234 (12%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN----------------------- 37
            M CL+ELLLD T I  +P SI  L  L +L+L GC++                       
Sbjct: 971  MPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTA 1030

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP---SSIFL 94
            L  LPS+I  LK+L+ L+L+ C     + ET+ ++ SL+EL I+G+A+   P    S+  
Sbjct: 1031 LRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSLLC 1090

Query: 95   MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
            + +L     +     PSS    L   + L   S+ + AL    +  L  + +LDL +C  
Sbjct: 1091 LTDLSAGDCKFLKQVPSSIGG-LNSLLQLQLDSTPIEALP-EEIGDLHFIRQLDLRNCK- 1147

Query: 155  GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
               A+P  IG + +L +L L  +N   LP     L NL +L++ +CK L+ LP+
Sbjct: 1148 SLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLKRLPK 1201



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 5/208 (2%)

Query: 3    CLRELLLDKTDI-KEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
             L +L+L++ ++  ++P S+  L  L+QL L+ C +L     +++ LK L+   L GC  
Sbjct: 901  ALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSN 960

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC--YLPF 119
               L E +G +  L+EL + GTAI   P SIF ++ L+ LS  GC       SC  YL  
Sbjct: 961  LSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTS 1020

Query: 120  PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              +L    + L  L   S+  L +L KL L  C      IP  I  L SLK L+++ +  
Sbjct: 1021 LEDLYLDDTALRNLP-SSIGDLKNLQKLHLMRCT-SLSTIPETINKLMSLKELFINGSAV 1078

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLP 207
              LP     L  L  L   DCK L+ +P
Sbjct: 1079 EELPIETGSLLCLTDLSAGDCKFLKQVP 1106



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 26/137 (18%)

Query: 96   KNLKTLSFRGCNG----PPSSASCYLP--------FPINLMRRSSDLGALM--------- 134
            +NLK ++ RGC+G    P  S    L           + + R   +LG L+         
Sbjct: 877  ENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSS 936

Query: 135  ----LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
                L  +SGL  L K  LS C      +P +IG++  LK L L       LP SI  L 
Sbjct: 937  LSEFLGDVSGLKCLEKFFLSGCS-NLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQ 995

Query: 191  NLEKLKLEDCKRLQSLP 207
             LEKL L  C+ ++ LP
Sbjct: 996  KLEKLSLMGCRSIEELP 1012


>gi|168051179|ref|XP_001778033.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670576|gb|EDQ57142.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 361

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 112/227 (49%), Gaps = 20/227 (8%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           DI+E+  SI  L  L +L  +GC  L RLP NI +L  L+T+NL  C    ++  ++G +
Sbjct: 128 DIQEISFSIGRLRSLQELNCRGCDRLERLPENIGALTRLETINLSLCSALRSIPSSIGAL 187

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
             L +LD+S    ++C P SI  + +L+ L    C+   S     LP  I  M R   L 
Sbjct: 188 TGLSKLDLSNCLQLQCLPESIGQLTHLRELMMDNCDRLKS-----LPETIGHMVRLRKLH 242

Query: 131 -----GALMLP-SLSGLGSLTKLDLSDCGLGEGAI---PSDIGNLHSLKTLYLSK-NNFV 180
                  + +P SL  L +L +L LS   L    +   P  +  L  L+ LYL   +   
Sbjct: 243 LSGCSAVVYIPSSLGKLSNLQELSLSTKALLSNDVIKLPDYLVQLSRLRELYLHDCSGLE 302

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASL 224
           +LP  IN L NL  L L++C +L  LP    L  +++K+R+ GC  L
Sbjct: 303 SLPCCINKLSNLRILDLKNCSKLTGLPNNICLMTHLQKLRLKGCREL 349


>gi|359473396|ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 148/320 (46%), Gaps = 43/320 (13%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL------------ 54
            L LD T I ++P  I  L  L +L ++ CK L  LP  I S+ SL TL            
Sbjct: 911  LQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPE 970

Query: 55   -----------NLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
                       NL  C +   L  ++G ++SL  L +  TA+R  P S  ++ +L  L  
Sbjct: 971  SIGKLENLIMLNLNKCKRLRRLPGSIGNLKSLHHLKMEETAVRQLPESFGMLTSLMRLLM 1030

Query: 104  RGCNGPPSSASCYL-PFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPS 161
                 P       L P    ++    +   ++LP S S L  L +LD     +  G IP 
Sbjct: 1031 --AKRPHLELPQALGPTETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKIS-GKIPD 1087

Query: 162  DIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
            D   L SL+ L L +NNF +LP+S+  L  L KL L  C+ L++LP LP ++ +V    C
Sbjct: 1088 DFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANC 1147

Query: 222  ASLVTL-----LGALK-LRKSSC-TIIDF-----VDSLKLLGKNGLA--ISMLREFLEVV 267
             +L  +     L +L+ L  ++C  ++D      + SLK    +G +   S ++  L  V
Sbjct: 1148 YALEVISDLSNLESLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVKRRLSKV 1207

Query: 268  SAPSHKFSIVVPGSEIPKWF 287
            +  + + ++ +PGS IP WF
Sbjct: 1208 ALKNLR-TLSIPGSNIPDWF 1226



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 101/210 (48%), Gaps = 12/210 (5%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  +  L+ L L  CKNLV  PS+++ LK+L+TL L GC K + L E +  ++SL EL 
Sbjct: 712 SIGDIISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELL 771

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL--MLPS 137
           + GT I   P S+  +  L+ LS   C       +C      +L   S +  AL  +  S
Sbjct: 772 LDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLE-SLRELSFNDSALEEIPDS 830

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
              L +L +L L  C     AIP  + NL  L    ++ +    LPASI  L NL+ L +
Sbjct: 831 FGSLTNLERLSLMRCQ-SIYAIPDSVRNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSV 889

Query: 198 EDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
             C+ L  LP          + G AS+V L
Sbjct: 890 GHCRFLSKLP--------ASIEGLASMVVL 911



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 25/231 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKT------- 53
           M+ LRELLLD T I+++P S+  L+ L +L+L  C++L +LP+ I  L+SL+        
Sbjct: 764 MKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSA 823

Query: 54  ----------------LNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                           L+L+ C     + ++V  ++ L E  ++G+ +   P+SI  + N
Sbjct: 824 LEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVRNLKLLTEFLMNGSPVNELPASIGSLSN 883

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
           LK LS   C       +        ++ +      + LP  + GL +L +L++  C   E
Sbjct: 884 LKDLSVGHCRFLSKLPASIEGLASMVVLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLE 943

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            ++P  IG++ SL TL +       LP SI  L NL  L L  CKRL+ LP
Sbjct: 944 -SLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLP 993


>gi|302818895|ref|XP_002991120.1| hypothetical protein SELMODRAFT_132799 [Selaginella moellendorffii]
 gi|300141214|gb|EFJ07928.1| hypothetical protein SELMODRAFT_132799 [Selaginella moellendorffii]
          Length = 550

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 118/228 (51%), Gaps = 14/228 (6%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D  ++ E+P++I  LS L +L L+GC +L  LP  I  LKSL+ L+L  C     L    
Sbjct: 200 DCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGGLKSLRCLSLAECVSLTTLAVPR 259

Query: 70  GQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLM 124
           G + SLE LD+ G +++   P+ +  M +L+ L+ R C      PP             +
Sbjct: 260 GSLASLEILDLVGCSSLTELPAGVAGMSSLERLNCRECTALKALPPQVGE-LTRLQALYL 318

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLP 183
           ++ S L  L  P +  L  L +LDL  CG G  ++PS+IG L  LK L+L+       LP
Sbjct: 319 QQCSTLKELP-PQIGKLSMLERLDLKKCG-GLTSLPSEIGMLSRLKFLHLNACTGIKQLP 376

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP----QLPPNVEKVRVNGCASLVTL 227
           A +  + +L +L LE C  L+ LP    QL  ++E + ++GC  L +L
Sbjct: 377 AEVGDMRSLVELGLEGCTSLKGLPAQVGQL-RSLENLGLDGCTGLASL 423



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 114/273 (41%), Gaps = 47/273 (17%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L+  + + E+P  +  +S L +L  + C  L  LP  +  L  L+ L L  C   + L  
Sbjct: 270 LVGCSSLTELPAGVAGMSSLERLNCRECTALKALPPQVGELTRLQALYLQQCSTLKELPP 329

Query: 68  TVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            +G++  LE LD+     +   PS I ++  LK L    C G        LP  +  MR 
Sbjct: 330 QIGKLSMLERLDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQ-----LPAEVGDMRS 384

Query: 127 SSDLGALMLPSLSGLG-------SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK--- 176
             +LG     SL GL        SL  L L  C  G  ++P+D+GNL SLK L L+K   
Sbjct: 385 LVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCT-GLASLPADVGNLESLKRLSLAKCAA 443

Query: 177 ----------------------NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP---- 210
                                  +   +PA +  +  L  L LE C  L S+P  P    
Sbjct: 444 LEGLPREVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIP--PGIFR 501

Query: 211 -PNVEKVRVNGCASLVTLLGALK-LRKSSCTII 241
            PN+E + +  C  L   +G+   + K  CT++
Sbjct: 502 LPNLELLDLRRCTLLAQDVGSSSDMHKYGCTLV 534



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 113/248 (45%), Gaps = 28/248 (11%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL LD    + E+P SI  L  L  L +  C +L  LP +I  L  L+ L L  C   
Sbjct: 1   LVELELDNCVKLVELPRSIGSLKWLHSLHMHNCHSLRALPDSIGGLVMLQELVLSVCTSI 60

Query: 63  ENLLETVGQVESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L +++G +  LE +D++    +   P SI  +  LK +   GC    S     LP  I
Sbjct: 61  TELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTS-----LPPEI 115

Query: 122 NLMRRSSDL-----GAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL-Y 173
             +R   +L     G+L  + P +  L  LT LD+S C      +P  IGNL  L+ L  
Sbjct: 116 GELRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCE-QLMLLPQQIGNLTGLRELNM 174

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV------EKVRVNGCASLVTL 227
           +       LP  +  L  L  L+L DCK   +LP+LP  +      +++ + GCA L  L
Sbjct: 175 MWCEKLAALPPQVGFLHELTDLELSDCK---NLPELPVTIGKLSCLKRLHLRGCAHLKVL 231

Query: 228 ---LGALK 232
              +G LK
Sbjct: 232 PPEIGGLK 239



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 17/236 (7%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL+L   T I E+P S+  L  L  + L  C  L+ LP +I  L +LK ++L GC   
Sbjct: 49  LQELVLSVCTSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESL 108

Query: 63  ENLLETVGQVESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYL 117
            +L   +G++ +L EL ++G  +++  P  I  + +L  L    C      P    +   
Sbjct: 109 TSLPPEIGELRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTG 168

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSK 176
              +N+M     L AL  P +  L  LT L+LSDC  L E  +P  IG L  LK L+L  
Sbjct: 169 LRELNMM-WCEKLAALP-PQVGFLHELTDLELSDCKNLPE--LPVTIGKLSCLKRLHLRG 224

Query: 177 -NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP----PNVEKVRVNGCASLVTL 227
             +   LP  I  L +L  L L +C  L +L  +P     ++E + + GC+SL  L
Sbjct: 225 CAHLKVLPPEIGGLKSLRCLSLAECVSLTTL-AVPRGSLASLEILDLVGCSSLTEL 279


>gi|22325729|ref|NP_179298.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251488|gb|AEC06582.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1195

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 158/362 (43%), Gaps = 56/362 (15%)

Query: 13   DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            ++K +P  ++ +  L+ L L GC  LV LP     LKSLKTL L  C  FE         
Sbjct: 716  ELKTLPQEMQEMESLIYLNLGGCTRLVSLPEF--KLKSLKTLILSHCKNFEQFPVIS--- 770

Query: 73   ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY---------------- 116
            E LE L + GTAI+C P+SI  ++ L  L  + C    S   C                 
Sbjct: 771  ECLEALYLQGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPDCLGNLRSLQELILSGCSK 830

Query: 117  LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
            L F   L      +  L+L    G        L  C   +G   ++    +SL   YL  
Sbjct: 831  LKFFPELKETMKSIKILLL---DGTAIKQMPILLQCIQSQGHSVANKTLPNSLSDYYLPS 887

Query: 177  ---------NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
                     N+  +L A+I+ L++L+ L L++CK+L+S+  LPPN++ +  +GC SL  +
Sbjct: 888  SLLSLCLSGNDIESLHANISQLYHLKWLDLKNCKKLKSVSVLPPNLKCLDAHGCDSLEEV 947

Query: 228  LGALKL----RKSSCTIIDFVDSLKLLGKNGLAISMLREFL----EVVSAPSHKF----- 274
               L +     K  CT I F +  KL   + +A S +  F     +++S   +++     
Sbjct: 948  GSPLAVLMVTGKIHCTYI-FTNCNKL---DQVAESNIISFTWRKSQMMSDALNRYNGGFV 1003

Query: 275  -----SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIR 329
                 S   PG E+P  F +Q  G+ +    P + C+ +++ G A C V   P +     
Sbjct: 1004 LESLVSTCFPGCEVPASFDHQAYGALLQTKLPRHWCD-SRLTGIALCAVILFPDYQHQSN 1062

Query: 330  RF 331
            RF
Sbjct: 1063 RF 1064



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 29/224 (12%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K   L +   ++  L+ +D+S ++  C  S +    N++ L+  GC    +     LP  
Sbjct: 669 KITRLWKESKEISKLKWVDLSHSSELCDISGLIGAHNIRRLNLEGCIELKT-----LPQE 723

Query: 121 INLMRRSSDL---GALMLPSLS--GLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYL 174
           +  M     L   G   L SL    L SL  L LS C    +  + S+      L+ LYL
Sbjct: 724 MQEMESLIYLNLGGCTRLVSLPEFKLKSLKTLILSHCKNFEQFPVISE-----CLEALYL 778

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLLGAL 231
                  +P SI  L  L  L L+DC+ L SLP    N+  ++   ++GC+ L      L
Sbjct: 779 QGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPDCLGNLRSLQELILSGCSKL-KFFPEL 837

Query: 232 KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFS 275
           K         + + S+K+L  +G AI  +   L+ + +  H  +
Sbjct: 838 K---------ETMKSIKILLLDGTAIKQMPILLQCIQSQGHSVA 872


>gi|296089376|emb|CBI39195.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 177/451 (39%), Gaps = 109/451 (24%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ L+LD  T + ++  S+  L  L +L+LK C NL   PS I  L SL+ L L GC K 
Sbjct: 99  LKMLILDGCTQLCKIHPSLGDLDKLARLSLKNCINLEHFPS-IGQLVSLEDLILSGCSKL 157

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E   +    +  L +L + GTA    PSSI     L  L  + C                
Sbjct: 158 EKFPDIFQHMPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCR--------------K 203

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           L    S +G L L     L   +  DL  C +  G                    N   L
Sbjct: 204 LRSLPSSIGKLTLLETLSLSGCS--DLGKCEVNSG--------------------NLDAL 241

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL-GALKLRKSSCTII 241
           P +++ L +L +L+L++C+ L++LP LP ++E +  + C SL  +   A+  +  SC   
Sbjct: 242 PRTLDQLCSLWRLELQNCRSLRALPALPSSLEIINASNCESLEDISPQAVFSQFRSCM-- 299

Query: 242 DFVDSLKLLGKNGLAISMLREFLEVVSAPSHK----------------FSIVVPGSEIPK 285
            F + LKL         M R+   + +   H+                FS V PGS IP 
Sbjct: 300 -FGNCLKL---TKFQSRMERDLQSMAAPVDHEIQPSTFEEQNPEVPVLFSTVFPGSGIPD 355

Query: 286 WFMYQNEGS--SITVTRPSYLCNMNQVVGYAACRVFHVPKH------------------- 324
           WF +++EG   +I V++  Y  N    +G+A   V    K                    
Sbjct: 356 WFEHRSEGHEINIQVSQNWYTSNF---LGFALSAVVAPEKEPLTSGWKTYCDLGCGAPNS 412

Query: 325 ---STGIRRFYRYPHPAHVL-HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHF 380
              S GI  F        +L H ++       GSDH WL Y+P    +   KW    +  
Sbjct: 413 KLKSNGIFSFSIVDDSTELLEHITI-------GSDHWWLAYVPSFIGFAPEKW----SCI 461

Query: 381 RLSFMDEREKHCPAGSGTGLKVKRCGFHPGY 411
           + SF  +RE            VK CG  P Y
Sbjct: 462 KFSFRTDRE---------SCIVKCCGVCPVY 483



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL +L LD T   E+P SI   + LV+L LK C+ L  LPS+I  L  L+TL+L GC 
Sbjct: 167 MPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCRKLRSLPSSIGKLTLLETLSLSGCS 226

Query: 61  KFENLLETVGQVESL 75
                    G +++L
Sbjct: 227 DLGKCEVNSGNLDAL 241


>gi|302398837|gb|ADL36713.1| HD domain class transcription factor [Malus x domestica]
          Length = 570

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 27/301 (8%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           +L D   + E+  S+  L  LV L L GC  L R  + +  L+SL+ L L GC +  +  
Sbjct: 277 VLSDCKSLVEVDDSVGFLDKLVYLNLNGCSKLKRFATRL-GLRSLEWLYLKGCTRLGSFP 335

Query: 67  ETV-GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
           E   G+++SL +LDI  + IR  PSSI  +  L+ L    C     ++  ++    +L++
Sbjct: 336 EIEEGKMKSLTDLDIRQSGIRELPSSIAYLTGLQRLKANECENLTGTSLHHIYGLQDLIQ 395

Query: 126 -------RSSDLG--ALMLPSLSGLGSLT-------KLDLSDCGLGEGAIPSDIGNLHSL 169
                  +    G   +    +S   S+T        LDL  C L E      +G   +L
Sbjct: 396 VHFGKCPKLVTFGNHKVKFDEVSSCNSITLALPNLFDLDLGGCNLSESDFLVPLG-CWAL 454

Query: 170 KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ-LPPNVEKVRVNGCASLVTLL 228
            +L LS NNFV+LP  I+   NL KL+L  C+RL+ +PQ LPP++  + ++ C SL  + 
Sbjct: 455 ASLDLSGNNFVSLPDCIDKFVNLMKLRLSGCRRLRKIPQVLPPSLCDLYLDDCTSLEKIP 514

Query: 229 GALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFM 288
               + +     ++  + +KL   +G  ++ L+       +   +  +++P +E+ KW  
Sbjct: 515 ELPPMLEH----LELTNCIKL---SGHEVAKLKNNWLNEESERGELQVILPDNEVQKWPS 567

Query: 289 Y 289
           Y
Sbjct: 568 Y 568


>gi|300697477|ref|YP_003748138.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074201|emb|CBJ53746.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CFBP2957]
          Length = 890

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 109/226 (48%), Gaps = 38/226 (16%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+ L +D + ++++P     L  LV L+L   K L  LPS+  +L +LKTL+L    K 
Sbjct: 261 ALQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALKTLSLQDNPKL 319

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E+L ++ GQ+  L+ L ++G  IR  P            S RG     SS          
Sbjct: 320 ESLPQSFGQLSGLQALTLTGNHIRALP------------SMRGA----SSLQTMTVAEAA 363

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-T 181
           L +  +D         S LG+L  L LSD  L E  +P+DIGNL +LKTL L  N  +  
Sbjct: 364 LEKLPAD--------FSTLGNLAHLSLSDTKLRE--LPADIGNLQALKTLTLRNNEKLGA 413

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           LPASI  L +LE+L L    R + LP L         NG + L TL
Sbjct: 414 LPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSN-INSLKSLKTLNLLGCFKF 62
           L +L L  T + E+P S+  LS L  LTL     L  LP + +  LK+++ ++L  C + 
Sbjct: 470 LTQLTLSNTQLLELPASVGALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPRL 529

Query: 63  ENLLETVGQVESLEELDISG 82
             L +++G + +L  LD+SG
Sbjct: 530 RTLPQSIGALSNLRTLDLSG 549


>gi|15230522|ref|NP_190724.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572077|emb|CAB63020.1| disease resistance-like protein [Arabidopsis thaliana]
 gi|332645285|gb|AEE78806.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1253

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 119/270 (44%), Gaps = 55/270 (20%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            LR+L L  T IKE+P S+  LS LV L L+ CK L +LP  I +L SL  LNL GC + E
Sbjct: 737  LRKLYLGGTAIKELP-SLMHLSELVVLDLENCKRLHKLPMGIGNLSSLAVLNLSGCSELE 795

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---------------- 107
            ++    G   +LEEL ++GTAI+   S I  +  L  L  + C                 
Sbjct: 796  DI---QGIPRNLEELYLAGTAIQEVTSLIKHLSELVVLDLQNCKRLQHLPMEISNLKSLV 852

Query: 108  ----GPPSSASC-----------------------YLPFPINLMRRSSDLGALMLPSLSG 140
                  PS  S                         L F  N  +R   L    LPS S 
Sbjct: 853  TLKLTDPSGMSIREVSTSIIQNGISEIGISNLNYLLLTFNENAEQRREYLPRPRLPSSSL 912

Query: 141  LG------SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
             G      +L  L L +  L    IP +I +L S+  L L +N F  +P SI  L  L  
Sbjct: 913  HGLVPRFYALVSLSLFNASLMH--IPEEICSLPSVVLLDLGRNGFSKIPESIKQLSKLHS 970

Query: 195  LKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            L+L  C+ L  LP LP +++ + V+GC SL
Sbjct: 971  LRLRHCRNLILLPALPQSLKLLNVHGCVSL 1000



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 28/204 (13%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           + L+GC  L R  +     + L+ +NL GC K ++  E    +E   EL +  T IR  P
Sbjct: 620 IDLQGCARLQRFLAT-GHFQHLRVINLSGCIKIKSFPEVPPNIE---ELYLKQTGIRSIP 675

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
           +  F               P  ++  Y       + R     +  L  +  L +L  LDL
Sbjct: 676 TVTF--------------SPQDNSFIYDHKDHKFLNREVSSDSQSLSIMVYLDNLKVLDL 721

Query: 150 SDCGLGEGAIPSDIGNL-HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           S C   E     DI  +  +L+ LYL       LP+ ++ L  L  L LE+CKRL  LP 
Sbjct: 722 SQCLELE-----DIQGIPKNLRKLYLGGTAIKELPSLMH-LSELVVLDLENCKRLHKLPM 775

Query: 209 LPPNVEKVRV---NGCASLVTLLG 229
              N+  + V   +GC+ L  + G
Sbjct: 776 GIGNLSSLAVLNLSGCSELEDIQG 799


>gi|147858878|emb|CAN82897.1| hypothetical protein VITISV_026993 [Vitis vinifera]
          Length = 607

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 158/386 (40%), Gaps = 63/386 (16%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L  L+LD  T + ++  S+  L  L  L+L+ C NL   P  I+ L SL+TL L GC K 
Sbjct: 160 LNSLILDGCTQLCKIHPSLGDLDKLTWLSLENCINLEHFP-GISQLVSLETLILSGCSKL 218

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E  L+    +  L +L + GTAI   PSSI     L+ L  R C    S     LP  I 
Sbjct: 219 EKFLDISQHMPCLRQLYLDGTAITELPSSIDYATKLEILDLRNCRKLRS-----LPSSI- 272

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                  L  L   SLSG       DL  C +  G                    N   L
Sbjct: 273 -----CKLTLLWCLSLSGCS-----DLGKCEVNSG--------------------NLDAL 302

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--VTLLGALKLRKSS--- 237
           P +++ L +L+ L L++C  L++LP LP ++  +  + C SL  ++      L + S   
Sbjct: 303 PGTLDQLCSLKMLFLQNCWSLRALPALPSSLVILNASNCESLEDISPQSVFSLCRGSIFR 362

Query: 238 -CTIIDFVDSLKLLGKNGLAISMLRE-----FLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
            C+ +    S        +A  + +E     F E  S    +FS V PGS IP WF +++
Sbjct: 363 NCSKLTKFQSRMERDLQSMAAKVDQEKWRSTFEEQNSEVDVQFSTVFPGSGIPDWFKHRS 422

Query: 292 EGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHS-------------TGIRRFYRYPHPA 338
           +       + S     +  +G+A C V    K S               +   ++     
Sbjct: 423 KRWRKIDMKVSPNWYTSNFLGFALCAVVAPKKKSLTSSWSAYCDLEFRALNSKWKSNRSF 482

Query: 339 HVLHC-SMDEKFGHRGSDHLWLLYLP 363
           H+    +   K    GSDH+WL Y+P
Sbjct: 483 HIFDVFTRGLKDITIGSDHVWLAYVP 508



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 36/59 (61%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M CLR+L LD T I E+P SI+  + L  L L+ C+ L  LPS+I  L  L  L+L GC
Sbjct: 228 MPCLRQLYLDGTAITELPSSIDYATKLEILDLRNCRKLRSLPSSICKLTLLWCLSLSGC 286


>gi|83747846|ref|ZP_00944879.1| PopC [Ralstonia solanacearum UW551]
 gi|83725493|gb|EAP72638.1| PopC [Ralstonia solanacearum UW551]
          Length = 890

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 109/226 (48%), Gaps = 38/226 (16%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+ L +D + ++++P     L  LV L+L   K L  LPS+  +L +LKTL+L G  K 
Sbjct: 261 ALQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALKTLSLQGNPKL 319

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E+L ++ GQ+  L+ L ++   IR  P            S RG     SS          
Sbjct: 320 ESLPQSFGQLSGLQALTLTDNHIRALP------------SMRGA----SSLQTMTVAEAA 363

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-T 181
           L +  +D         S LG+L  L LSD  L E  +P+DIGNL +LKTL L  N  +  
Sbjct: 364 LEKLPAD--------FSTLGNLAHLSLSDTKLRE--LPADIGNLQALKTLTLRNNEKLGA 413

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           LPASI  L +LE+L L    R + LP L         NG + L TL
Sbjct: 414 LPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSN-INSLKSLKTLNLLGCFKF 62
           L +L L  T + E+P S+  LS L  LTL     L  LP + +  LK+++ ++L  C + 
Sbjct: 470 LTQLTLSNTQLLELPASVGALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPRL 529

Query: 63  ENLLETVGQVESLEELDISG 82
             L +++G + +L  LD+SG
Sbjct: 530 RTLPQSIGALSNLRTLDLSG 549


>gi|359493402|ref|XP_002279700.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1186

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 183/495 (36%), Gaps = 97/495 (19%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            MECL+EL  +++ I+E+P SI  L+ L  L L  C N  + P    ++K L+ L L  C 
Sbjct: 672  MECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLERCS 731

Query: 61   KFENLLET-----------------------VGQVESLEELDIS---------------- 81
            KFE   +T                       +G +ESLE LD+S                
Sbjct: 732  KFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMK 791

Query: 82   --------GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL--- 130
                     TAI+  P+SI  + +L+ LS R C+     +  +       M R  +L   
Sbjct: 792  CLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTN-----MGRLRELCLY 846

Query: 131  --GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
              G   LP S+  L SL +L+L  C   E   P   GN+  LK L L       LP  I 
Sbjct: 847  GSGIKELPGSIGYLESLEELNLRYCSNFE-KFPEIQGNMKCLKMLCLEDTAIKELPNGIG 905

Query: 188  CLFNLEKLKLEDCKRLQSLPQLPPNV--------EKVRVNGCASLV---TLLGALKLR-- 234
             L  LE L L  C  L+  P++  N+        ++  + G    V   T L  L L   
Sbjct: 906  RLQALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENC 965

Query: 235  ---KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK---FSIVVPGSEIPKWFM 288
               KS    I  + SLK L  NG   S L  FLE+          F      SE+P    
Sbjct: 966  RNLKSLPNSICGLKSLKGLSLNG--CSNLEAFLEITEDMEQLEGLFLCETGISELPSSIE 1023

Query: 289  YQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEK 348
            +     S+ +     L  +   +G   C      ++   +            + CS +  
Sbjct: 1024 HLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSQQCISCSSERY 1083

Query: 349  FGHRGSD-HLWLLYLP--------RQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTG 399
                 SD  LW+ Y P        R   + N K HF +  +  SF          G    
Sbjct: 1084 DSGSTSDPALWVTYFPQIGIPSKYRSRKWNNFKAHFYNRVYNASF--------TCGENAS 1135

Query: 400  LKVKRCGFHPGYMHE 414
             K+K CG H  Y  +
Sbjct: 1136 FKMKSCGIHLIYAQD 1150



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 102/245 (41%), Gaps = 56/245 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           MECL+EL L+K+ I+                         LPS+I  L SL+ LNL  C 
Sbjct: 625 MECLKELYLNKSGIQA------------------------LPSSIVYLASLEVLNLSYCS 660

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP---------- 110
            F+   E  G +E L+EL  + + I+  PSSI  + +L+ L+   C+             
Sbjct: 661 NFKKFPEIHGNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMK 720

Query: 111 -------SSASCYLPFPINL----------MRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
                     S +  FP             +R S   G   LPS  G L SL  LDLS C
Sbjct: 721 FLRELYLERCSKFEKFPDTFTYMGHLRGLHLRES---GIKELPSSIGYLESLEILDLSCC 777

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
              E   P   GN+  L  L+L +     LP SI  L +LE L L +C + +    +  N
Sbjct: 778 SKFE-KFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTN 836

Query: 213 VEKVR 217
           + ++R
Sbjct: 837 MGRLR 841



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 93/195 (47%), Gaps = 26/195 (13%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           +S L +L L+GC +L  L  +I  LKSL  LNL GC +  + L ++ + ESLE L     
Sbjct: 554 MSNLERLNLEGCISLRELHPSIGDLKSLTYLNLGGCEQLRSFLSSM-KFESLEVL----- 607

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLG 142
            + C P       NLK   F   +G   +  C     +N        G   LP S+  L 
Sbjct: 608 YLNCCP-------NLK--KFPEIHG---NMECLKELYLN------KSGIQALPSSIVYLA 649

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           SL  L+LS C       P   GN+  LK LY +++    LP+SI  L +LE L L DC  
Sbjct: 650 SLEVLNLSYCS-NFKKFPEIHGNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSN 708

Query: 203 LQSLPQLPPNVEKVR 217
            +  P++  N++ +R
Sbjct: 709 FEKFPEIHGNMKFLR 723



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 81/212 (38%), Gaps = 48/212 (22%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           C    L D  DI +     E L  L  + L   K LV++P   +S+ +L+ LNL GC   
Sbjct: 510 CKWSRLWDVDDIYDAFSKQERLEELKGIDLSNSKQLVKMPK-FSSMSNLERLNLEGCISL 568

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L  ++G ++SL  L++ G        S    ++L+ L    C                
Sbjct: 569 RELHPSIGDLKSLTYLNLGGCEQLRSFLSSMKFESLEVLYLNCC---------------- 612

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                        P+L                     P   GN+  LK LYL+K+    L
Sbjct: 613 -------------PNLK------------------KFPEIHGNMECLKELYLNKSGIQAL 641

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           P+SI  L +LE L L  C   +  P++  N+E
Sbjct: 642 PSSIVYLASLEVLNLSYCSNFKKFPEIHGNME 673


>gi|227438251|gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 19/261 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIE--LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG 58
            +  L+EL++D + ++E+PLS++   L  L + +  GCK+L ++PS++  L SL  L L  
Sbjct: 874  LASLQELIIDGSAVEELPLSLKPGSLPCLAKFSAGGCKSLKQVPSSVGWLNSLLQLKL-D 932

Query: 59   CFKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGP--PSSASC 115
                  L E + Q+  ++++++    +++  P+ I  M  L +L   G N    P +   
Sbjct: 933  STPITTLPEEISQLRFIQKVELRNCLSLKSLPNKIGDMDTLHSLYLEGSNIEELPENFGN 992

Query: 116  YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
                 +  M +  +L  L   S  GL SL  L + +  + E  +P   GNL +L+ L L 
Sbjct: 993  LENLVLLQMNKCKNLKKLP-NSFGGLKSLCHLYMEETLVME--LPGSFGNLSNLRVLNLG 1049

Query: 176  KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--------VTL 227
             N F +LP+S+  L +L++L L DC+ L  LP LP N+EK+ +  C SL        +T+
Sbjct: 1050 NNKFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPCNLEKLNLANCCSLESISDLSELTM 1109

Query: 228  LGALKLRKSSCTIIDFVDSLK 248
            L  L L  ++C I+D +  L+
Sbjct: 1110 LHELNL--TNCGIVDDIPGLE 1128



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 62/268 (23%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK-----------------------N 37
            M CL+ELLLD+T IK +P SI  L  L +L+LK C+                       +
Sbjct: 745  MLCLKELLLDETAIKNLPGSIFRLEKLQKLSLKSCRSIHELPECIGTLTSLEELDLSSTS 804

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI-RCP-------- 88
            L  LPS+I +LK+L+ L+++ C     + +T+ ++ SL+EL I G+A+   P        
Sbjct: 805  LQSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSL 864

Query: 89   ---PSSIFLMKNLKTLSFRGC-------NGPPSSASCYLPFPI----NLMRRSSDLGAL- 133
               P +I  + +L+ L   G        +  P S  C   F      +L +  S +G L 
Sbjct: 865  SKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLPCLAKFSAGGCKSLKQVPSSVGWLN 924

Query: 134  -------------MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                          LP  +S L  + K++L +C L   ++P+ IG++ +L +LYL  +N 
Sbjct: 925  SLLQLKLDSTPITTLPEEISQLRFIQKVELRNC-LSLKSLPNKIGDMDTLHSLYLEGSNI 983

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLP 207
              LP +   L NL  L++  CK L+ LP
Sbjct: 984  EELPENFGNLENLVLLQMNKCKNLKKLP 1011



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 30/218 (13%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+P S+  L  L+ L L+ C NL     +++ LKSL+ L L GC     L E +G +  L
Sbjct: 689 EVPSSVGNLRSLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGYMLCL 748

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
           +EL +  TAI+  P SIF ++ L+ LS + C        C                    
Sbjct: 749 KELLLDETAIKNLPGSIFRLEKLQKLSLKSCRSIHELPEC-------------------- 788

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEK 194
             +  L SL +LDLS   L   ++PS IGNL +L+ L++    +   +P +IN L +L++
Sbjct: 789 --IGTLTSLEELDLSSTSL--QSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQE 844

Query: 195 LKLEDCKRLQSLP--QLPPNVEKV--RVNGCASLVTLL 228
           L + D   ++ LP    P ++ K+   +N  ASL  L+
Sbjct: 845 LII-DGSAVEELPLSLKPGSLSKIPDTINKLASLQELI 881



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 70/260 (26%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNIN-----------------------SLK 49
           ++ E  + +  L  L +L L GC +L  LP NI                         L+
Sbjct: 710 NLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLE 769

Query: 50  SLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP 109
            L+ L+L  C     L E +G + SLEELD+S T+++  PSSI  +KNL+ L    C   
Sbjct: 770 KLQKLSLKSCRSIHELPECIGTLTSLEELDLSSTSLQSLPSSIGNLKNLQKLHVMHC--- 826

Query: 110 PSSASCYLPFPINLMRRSSDL----------------GAL-MLP-SLSGLGSLTKLDLSD 151
             ++   +P  IN +    +L                G+L  +P +++ L SL +L +  
Sbjct: 827 --ASLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLSKIPDTINKLASLQELIIDG 884

Query: 152 CGLGE------------------------GAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             + E                          +PS +G L+SL  L L      TLP  I+
Sbjct: 885 SAVEELPLSLKPGSLPCLAKFSAGGCKSLKQVPSSVGWLNSLLQLKLDSTPITTLPEEIS 944

Query: 188 CLFNLEKLKLEDCKRLQSLP 207
            L  ++K++L +C  L+SLP
Sbjct: 945 QLRFIQKVELRNCLSLKSLP 964



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 30/210 (14%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           + L+GC +L  +P ++++ KSL+ L   GC     +  +VG + SL  LD+      CP 
Sbjct: 656 VNLRGCDSLEAIP-DLSNHKSLEKLVFEGCKLLVEVPSSVGNLRSLLHLDLRN----CPN 710

Query: 90  SSIFL-----MKNLKTLSFRGCNGPPSSASCYLPFPINLM--RRSSDLGALMLPSLSG-- 140
            + FL     +K+L+ L   GC     S+   LP  I  M   +   L    + +L G  
Sbjct: 711 LTEFLVDVSGLKSLEKLYLSGC-----SSLSVLPENIGYMLCLKELLLDETAIKNLPGSI 765

Query: 141 --LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
             L  L KL L  C      +P  IG L SL+ L LS  +  +LP+SI  L NL+KL + 
Sbjct: 766 FRLEKLQKLSLKSCR-SIHELPECIGTLTSLEELDLSSTSLQSLPSSIGNLKNLQKLHVM 824

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
            C  L  +P          +N  ASL  L+
Sbjct: 825 HCASLSKIPD--------TINKLASLQELI 846



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 11/182 (6%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ L  L L+ ++I+E+P +   L  LV L +  CKNL +LP++   LKSL  L +    
Sbjct: 970  MDTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETL 1029

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              E L  + G + +L  L++        PSS+  + +LK LS   C       +C    P
Sbjct: 1030 VME-LPGSFGNLSNLRVLNLGNNKFHSLPSSLKGLSSLKELSLCDCQ----ELTCLPSLP 1084

Query: 121  INLMRRSSDLGALMLPSLSGLGSLT---KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
             NL  + +      L S+S L  LT   +L+L++CG+ +  IP  + +L +LK L +S  
Sbjct: 1085 CNL-EKLNLANCCSLESISDLSELTMLHELNLTNCGIVDD-IPG-LEHLTALKRLDMSGC 1141

Query: 178  NF 179
            NF
Sbjct: 1142 NF 1143


>gi|207739231|ref|YP_002257624.1| type III effector protein popc [Ralstonia solanacearum IPO1609]
 gi|206592604|emb|CAQ59510.1| type III effector protein popc [Ralstonia solanacearum IPO1609]
          Length = 890

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 109/226 (48%), Gaps = 38/226 (16%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+ L +D + ++++P     L  LV L+L   K L  LPS+  +L +LKTL+L G  K 
Sbjct: 261 ALQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALKTLSLQGNPKL 319

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E+L ++ GQ+  L+ L ++   IR  P            S RG     SS          
Sbjct: 320 ESLPQSFGQLSGLQALTLTDNHIRALP------------SMRGA----SSLQTMTVAEAA 363

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-T 181
           L +  +D         S LG+L  L LSD  L E  +P+DIGNL +LKTL L  N  +  
Sbjct: 364 LEKLPAD--------FSTLGNLAHLSLSDTKLRE--LPADIGNLQALKTLTLRNNEKLGA 413

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           LPASI  L +LE+L L    R + LP L         NG + L TL
Sbjct: 414 LPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSN-INSLKSLKTLNLLGCFKF 62
           L +L L  T + E+P S+  LS L  LTL     L  LP + +  LK+++ ++L  C + 
Sbjct: 470 LTQLTLSNTQLLELPASVGALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPRL 529

Query: 63  ENLLETVGQVESLEELDISG 82
             L +++G + +L  LD+SG
Sbjct: 530 RTLPQSIGALSNLRTLDLSG 549


>gi|255567756|ref|XP_002524856.1| hypothetical protein RCOM_0723140 [Ricinus communis]
 gi|223535819|gb|EEF37480.1| hypothetical protein RCOM_0723140 [Ricinus communis]
          Length = 375

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 147/350 (42%), Gaps = 54/350 (15%)

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +ESL E+   GTAI+  P SI  +K L+ +S  G     S  S +      L  R+ +  
Sbjct: 1   MESLTEILAYGTAIKLLPYSIGDLKKLRNVSL-GVLKDTSPRSWFSSISSWLSPRNPNSK 59

Query: 132 ALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
           +L+LP S   L SL  L L  C L E +IPS + NL SL+ L L  N F  LP  I+ L 
Sbjct: 60  SLLLPASFVCLSSLQSLALCHCNLTEDSIPS-LENLSSLQYLDLKGNKFSRLPTGIHSLT 118

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLL 250
            L++L L  C  + S+ +LPP+++ +    C SL                    + L + 
Sbjct: 119 KLDRLCLNSCTNIVSISELPPSLKVLYAYNCISL--------------------EKLSIQ 158

Query: 251 GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQV 310
            K    + +     +V+S      +I +PGSE+  WF +Q  GSS++   P  +   +++
Sbjct: 159 SKEAPLLHLPYRQKQVLSKYRPLPAIFLPGSEVSSWFAHQGYGSSLSFYIPP-VSEGDEI 217

Query: 311 VGYAACRVFHV--------PKHSTGIRR----FYRYPHPAHVLHCSMDEKFGHRGSDHLW 358
            G     ++          P     I R       Y H +  L  S+  +      DH W
Sbjct: 218 RGLFIWGIYSAGEQYDPSGPASPFAIIRNKSNGLEYIHRSAYLSTSLVRE------DHSW 271

Query: 359 LLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFH 408
           + ++P     C+ K   E   + L             +G    VK+CG H
Sbjct: 272 VTFVPFSLVPCSRKGGEELEVYVLV------------AGIATVVKKCGVH 309


>gi|359496028|ref|XP_003635135.1| PREDICTED: putative disease resistance protein At4g11170-like [Vitis
            vinifera]
 gi|296090593|emb|CBI40962.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 211/517 (40%), Gaps = 106/517 (20%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL +L LD T I E+P SI   + LV L LK C+ L  LPS+I  L  LKTL+L GC 
Sbjct: 722  MPCLSKLYLDGTAITELPSSIAYATELVLLDLKNCRKLWSLPSSICQLTLLKTLSLSGCS 781

Query: 61   ----------KFENLLETVGQVESLEELDI----SGTAIRCPPSSIFLMK---------- 96
                        + L  T+ ++ +L  L++    S  A+   PSS+ ++           
Sbjct: 782  DLGKCEVNSGNLDALPRTLDKLCNLWRLELQNCRSLRALPALPSSLAIINARNCESLEDA 841

Query: 97   -------NLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
                   ++KTL   GC      P  A  ++P    L    + +  L   S+S    L  
Sbjct: 842  GAFSQLVSVKTLILSGCPKLEKFPDIAQ-HMPCLSKLYLDGTAITELP-SSISYATELVL 899

Query: 147  LDLSDCGLGEGAIPSDIGNL-----------HSLKTLYLSKNNFVTLPASINCLFNLEKL 195
            LDL +C     ++PS I  L             L    ++  N   LP +++ L NL +L
Sbjct: 900  LDLKNCR-KLWSLPSSICQLTLLETLSLSGCSDLGKCEVNSGNLDALPRTLDQLRNLWRL 958

Query: 196  KLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGA---LKLRKS---SCTIIDFVDSLKL 249
            +L++CK L++LP LP ++E +  + C SL  +       +LR+S   +C  +    S   
Sbjct: 959  ELQNCKSLRALPVLPSSLEFINASNCESLEDISPQSVFSQLRRSMFGNCFKLTKFQSRME 1018

Query: 250  LGKNGLAISM----LREFLEVVSAPSHK-FSIVVPGSEIPKWFMYQNEGSSITVTRPSYL 304
                 +A  +     R   E  S   H  FS V PGS IP WF +++EG  I + + S  
Sbjct: 1019 RDLQSMAAHVDQKKWRSTFEEQSPVVHVLFSTVFPGSGIPDWFAHRSEGHEINI-QVSQN 1077

Query: 305  CNMNQVVGYA----------------------ACRVFHVPKHSTGIRRF-YRYPHPAHVL 341
               +  +G+A                       C  F+    S GI  F +       + 
Sbjct: 1078 WYSSYFLGFAFSAVVAPEKEPLTSGWITYCDLRCGAFNSELKSNGIFSFSFVDDWTEQLE 1137

Query: 342  HCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLK 401
            H ++        SDH+WL Y+P    +   KW    +  + SF  ++E            
Sbjct: 1138 HITI-------ASDHMWLAYVPSFLGFSPEKW----SCIKFSFRTDKE---------SCI 1177

Query: 402  VKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHH 438
            VKRCG  P Y+      D  +   T   +Y+L  F  
Sbjct: 1178 VKRCGVCPVYIRSSTLDDAES---TNAHAYDLEWFER 1211



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 95/228 (41%), Gaps = 47/228 (20%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           +ECL   +LD  T + ++ LS+  L  L  L+L+ C NL   P  I  L SLKTL L GC
Sbjct: 654 LECL---ILDGCTQLCKIHLSLGTLDKLTLLSLENCINLKHFP-GICQLVSLKTLILSGC 709

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCY 116
            K E   +    +  L +L + GTAI   PSSI     L  L  + C      PSS    
Sbjct: 710 PKLEKFPDIAQHMPCLSKLYLDGTAITELPSSIAYATELVLLDLKNCRKLWSLPSSICQL 769

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
                  +   SDLG                    C +  G                   
Sbjct: 770 TLLKTLSLSGCSDLGK-------------------CEVNSG------------------- 791

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            N   LP +++ L NL +L+L++C+ L++LP LP ++  +    C SL
Sbjct: 792 -NLDALPRTLDKLCNLWRLELQNCRSLRALPALPSSLAIINARNCESL 838


>gi|359493392|ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 141/353 (39%), Gaps = 78/353 (22%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE---SLEELDI 80
            L  L  L    C+NL  LP +I +L SLKTL +  C K E +LE    V+         I
Sbjct: 842  LKALQLLDFSRCRNLESLPMSIYNLSSLKTLRITNCPKLEEMLEIELGVDWPLPPTTSHI 901

Query: 81   SGTAI---------------RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP-FPINLM 124
            S +AI               +CP SS+     L    F G      S S +L    I  +
Sbjct: 902  SNSAIIWYDGCFSSLEALKQKCPLSSLV---ELSVRKFYGMEKDILSGSFHLSSLKILSL 958

Query: 125  RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH----------------- 167
                 +   +L  +  L SL KL L+ C   E  IPSDI NL                  
Sbjct: 959  GNFPSMAGGILDKIFHLSSLVKLSLTKCKPTEEGIPSDIRNLSPLQQLSLHDCNLMEGKI 1018

Query: 168  --------SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV--- 216
                    SL+ L+L  N+F ++PA I+ L NL+ L L  CK LQ +P+LP ++  +   
Sbjct: 1019 LNHICHLTSLEELHLGWNHFSSIPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFLDAH 1078

Query: 217  ---RVNGCASLV---TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAP 270
               R++   SL+   +++   K     C +I    S      NG+ I + R         
Sbjct: 1079 CSDRISSSPSLLPIHSMVNCFKSEIEDCVVIHRYSS---FWGNGIGIVIPR--------- 1126

Query: 271  SHKFSIVVPGSEIPKWFMYQNEGS-SITVTRPSYLCNMNQVVGYAACRVFHVP 322
                      S I +W  Y+N G   +T+  P      + + G+A C V+  P
Sbjct: 1127 ---------SSGILEWITYRNMGGHKVTIELPPNWYENDDLWGFALCCVYVAP 1170



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 41/262 (15%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE-TVGQVESLEELDISG 82
           L+GL +L L  CKNL+ LP +I SL SL+TLNL  C K        +G +++LE LD+S 
Sbjct: 670 LNGLEKLDLGYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFPGINIGSLKALEYLDLSY 729

Query: 83  TA-IRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPS 137
              I   P++I    +L TLS  GC+     P  +   +       +   S L      +
Sbjct: 730 CENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMGCSKLKGFPDIN 789

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIG----------------------NLHSLKTLYLS 175
           +  L +L  LD S C   E ++P++IG                      N  SLK L L 
Sbjct: 790 IGSLKALQLLDFSRCRNLE-SLPNNIGSLSSLHTLLLVGCSKLKGFPDINFGSLKALQLL 848

Query: 176 K----NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ--------LPPNVEKVRVNGCAS 223
                 N  +LP SI  L +L+ L++ +C +L+ + +        LPP    +  +    
Sbjct: 849 DFSRCRNLESLPMSIYNLSSLKTLRITNCPKLEEMLEIELGVDWPLPPTTSHISNSAIIW 908

Query: 224 LVTLLGALKLRKSSCTIIDFVD 245
                 +L+  K  C +   V+
Sbjct: 909 YDGCFSSLEALKQKCPLSSLVE 930


>gi|224171160|ref|XP_002339466.1| predicted protein [Populus trichocarpa]
 gi|222875162|gb|EEF12293.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 115/236 (48%), Gaps = 20/236 (8%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R L L  T ++E P S+  L   + L L  C  L  LPS I  L  L+ LNL GC    +
Sbjct: 78  RYLYLSGTAVEEFPSSVGHLWR-ISLDLSNCGRLKNLPSTIYELAYLEKLNLSGC---SS 133

Query: 65  LLETVGQVESLEELDISGTAI------RCPPSSIFLMKNLKTL-----SFRGCNGPPSSA 113
           + E      +++EL + GT I      R  P  +  M++L+ L       R  + P  + 
Sbjct: 134 ITEFPNISWNIKELYLDGTTIEEIIVNRRFPGILETMESLRYLYLDRTGIRKLSSPIRNL 193

Query: 114 S--CYLPFPINLMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
              C L            LG L +L     L  L KL+LS CG+ E  +P  +G L SL+
Sbjct: 194 KGLCCLALGNCKYLEGKYLGDLRLLEQDVDLKYLRKLNLSGCGILE--VPKSLGCLTSLE 251

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
            L LS NNFV LP +I+ L+ L+ L L  C+RL SL +LPP + K+  + C SL T
Sbjct: 252 ALDLSGNNFVRLPTNISELYELQYLGLRYCRRLGSLQKLPPRLAKLDAHSCTSLRT 307



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 8/113 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNL-------VRLPSNINSLKSLKT 53
           ME LR L LD+T I+++   I  L GL  L L  CK L       +RL      LK L+ 
Sbjct: 170 MESLRYLYLDRTGIRKLSSPIRNLKGLCCLALGNCKYLEGKYLGDLRLLEQDVDLKYLRK 229

Query: 54  LNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
           LNL GC   E + +++G + SLE LD+SG      P++I  +  L+ L  R C
Sbjct: 230 LNLSGCGILE-VPKSLGCLTSLEALDLSGNNFVRLPTNISELYELQYLGLRYC 281


>gi|297835804|ref|XP_002885784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331624|gb|EFH62043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 673

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 109/218 (50%), Gaps = 31/218 (14%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+P SI   + L  L L GC +LV LPS+I +  +L+TLNL  C     L  ++G+  +L
Sbjct: 178 ELPSSIGNATNLQTLNLSGCSSLVELPSSIGNATNLQTLNLRNCLSLVELPSSIGKATNL 237

Query: 76  EELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
           + L++S    +   P+SI    NL+TL+ R C                       L    
Sbjct: 238 QTLNLSDCHRLVELPTSIGNATNLQTLNLRDC-----------------------LSLAQ 274

Query: 135 LPSLSGLGS-LTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
           LPS  G  + L  L+LS C  L E  +PS IGN  S + L LS   + V LP+SI  + N
Sbjct: 275 LPSSIGKATHLQSLNLSYCTSLVE--LPSLIGNATSFQKLNLSYCTSLVRLPSSIGNVSN 332

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEK--VRVNGCASLVTL 227
           L+ L L DCK L  LP    N+ K  + + GC+SLV L
Sbjct: 333 LQTLNLRDCKSLVELPSSIGNLTKLDLDIRGCSSLVEL 370



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 115/230 (50%), Gaps = 29/230 (12%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L++L L   + + E+P SIE  + L +L L GC +LV LPS++ S  +L+ L L+ C   
Sbjct: 69  LQDLYLSNFSSLVELPSSIENATTLRKLDLSGCSSLVELPSSLGSAINLQDLYLINCSSL 128

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L  ++    + + LD+SG +++   PSSI    NL+TL+   C        C L    
Sbjct: 129 VKLPSSIRNAANHKILDLSGCSSLVELPSSIGNATNLQTLNLSNC--------CRLVELP 180

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFV 180
           + +  +++L  L   +LSG  SL +L            PS IGN  +L+TL L    + V
Sbjct: 181 SSIGNATNLQTL---NLSGCSSLVEL------------PSSIGNATNLQTLNLRNCLSLV 225

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
            LP+SI    NL+ L L DC RL  LP       N++ + +  C SL  L
Sbjct: 226 ELPSSIGKATNLQTLNLSDCHRLVELPTSIGNATNLQTLNLRDCLSLAQL 275



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 105/226 (46%), Gaps = 19/226 (8%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           + E+P  +   + L +L L GC +LV LP +I +   LK L L GC     L  ++G   
Sbjct: 9   LNELP-DLSTATNLQELYLNGCISLVELPYSIGNAIYLKILELSGCSSLVELPFSIGNAI 67

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           +L++L +S  +++   PSSI     L+ L   GC     S+   LP  +       DL  
Sbjct: 68  NLQDLYLSNFSSLVELPSSIENATTLRKLDLSGC-----SSLVELPSSLGSAINLQDLYL 122

Query: 133 LMLPSLSGLGSLTK-------LDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
           +   SL  L S  +       LDLS C      +PS IGN  +L+TL LS     V LP+
Sbjct: 123 INCSSLVKLPSSIRNAANHKILDLSGCS-SLVELPSSIGNATNLQTLNLSNCCRLVELPS 181

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
           SI    NL+ L L  C  L  LP       N++ + +  C SLV L
Sbjct: 182 SIGNATNLQTLNLSGCSSLVELPSSIGNATNLQTLNLRNCLSLVEL 227



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 35/223 (15%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSL------KSLKTLNLLGCFK 61
           L D   + E+P SI  L+ L  L ++GC +LV LPS+I +        ++ + N   C  
Sbjct: 338 LRDCKSLVELPSSIGNLTKL-DLDIRGCSSLVELPSSIGNFIMNQDGGNIYSFN--TCTS 394

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              +  ++G    LE L+  G +++   P+SI  + NL  L F  C+      +C     
Sbjct: 395 LLQIPSSIGNAIKLESLNFYGCSSLVDVPASIGNLINLDVLVFSECSSLVEVPTC----- 449

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                            +  L +LT LD + C     AIP+ IGNLH L+ L +   +  
Sbjct: 450 -----------------IGNLINLTYLDFNGCS-SLVAIPASIGNLHKLRMLAMKGCSKL 491

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
             LP ++N L +L++L L  C  L+  P++  N+ ++ ++G A
Sbjct: 492 EILPGNVN-LKSLDRLVLSGCSSLRCFPEISTNIRELYLSGTA 533



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 41/281 (14%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPSSIF 93
           C +L+++PS+I +   L++LN  GC    ++  ++G + +L+ L  S  +++   P+ I 
Sbjct: 392 CTSLLQIPSSIGNAIKLESLNFYGCSSLVDVPASIGNLINLDVLVFSECSSLVEVPTCIG 451

Query: 94  LMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLS 150
            + NL  L F GC+     P+S        +  M+  S L   +LP    L SL +L LS
Sbjct: 452 NLINLTYLDFNGCSSLVAIPASIGNLHKLRMLAMKGCSKLE--ILPGNVNLKSLDRLVLS 509

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP 210
            C       P    N   ++ LYLS      +P+ I     LE L +  CK L+     P
Sbjct: 510 GCS-SLRCFPEISTN---IRELYLSGTAIEVVPSFIWSCLRLETLDMSYCKNLKEFLHTP 565

Query: 211 PNV-------EKVR--VNGCASLVTLLGALKLRKSSC----TIIDFVDSLKLLGKNGLAI 257
            ++       +KV      C SL  L        SSC      ++F +  KL        
Sbjct: 566 DSITGHDSKRKKVSPFAENCESLERL-------YSSCHNPYISLNFDNCFKL-------- 610

Query: 258 SMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
              +E  +++   S + + V+PG +IP +F Y+  G S+ V
Sbjct: 611 --NQEARDLIIQTSTQLT-VLPGGDIPTYFTYRASGGSLVV 648


>gi|15230525|ref|NP_190725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572078|emb|CAB63021.1| propable disease resistance protein [Arabidopsis thaliana]
 gi|332645286|gb|AEE78807.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1226

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 153/355 (43%), Gaps = 67/355 (18%)

Query: 27   LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
            LV L LKGC +L  LP  IN L SL+ L L  C    NL E     ++LE L + GT+I+
Sbjct: 679  LVFLNLKGCTSLKSLPE-IN-LVSLEILILSNC---SNLKEFRVISQNLETLYLDGTSIK 733

Query: 87   CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT- 145
              P +  +++ L  L+ +GC        C             DL AL    LS    L  
Sbjct: 734  ELPLNFNILQRLVILNMKGCAKLKEFPDCL-----------DDLKALKELILSDCWKLQN 782

Query: 146  ------KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLFNLEKLKLE 198
                  ++ + +    +    ++I  + SL+ L LSKN+ + +LP +I+ L  L+ L L+
Sbjct: 783  FPAICERIKVLEILRLDTTTITEIPMISSLQCLCLSKNDHISSLPDNISQLSQLKWLDLK 842

Query: 199  DCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL-------------------KLRKSSCT 239
             CK L S+P+LPPN++ +  +GC SL T+   L                   KL +S+  
Sbjct: 843  YCKSLTSIPKLPPNLQHLDAHGCCSLKTVSNPLACLTTAQQIYSTFILTNCNKLERSAKE 902

Query: 240  IID---------FVDSLK--------------LLGKNGLAISMLREFLEVVSAPSHKFSI 276
             I           +D+ K               + K  ++I +        S     FSI
Sbjct: 903  EISSFAQRKCQLLLDAQKRCNVSSLISFSICCYISKIFVSICIFLSISMQNSDSEPLFSI 962

Query: 277  VVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
              PGSE+P WF ++  G  + +  P +  + N++ G A C V   PK    I  F
Sbjct: 963  CFPGSELPSWFCHEAVGPVLELRMPPHW-HENRLAGVALCAVVTFPKSQEQINCF 1016


>gi|356497765|ref|XP_003517729.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1135

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 66/306 (21%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDIS--- 81
           + L  L+L  CK+L ++  +I SL  L++L+L GC + ++L   V  +ESL++L +S   
Sbjct: 660 TNLEDLSLSQCKSLRQVHPSILSLPKLQSLDLEGCIEIQSLQSDV-HLESLQDLRLSNCS 718

Query: 82  ------------------GTAIRCPPSSIFLMKNLKTLSFRGCNGPPS---------SAS 114
                             GT I+  P+SI+    LK +  +GC+               +
Sbjct: 719 SLKEFSVMSVELRRLWLDGTHIQELPASIWGCTKLKFIDVQGCDNLDGFGDKLSYDPRTT 778

Query: 115 CYLPFPINLMRR--SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
           C+    ++  ++  +S+L  +++    G+ SLT L+L +C      +P  IG L SLK L
Sbjct: 779 CFNSLVLSGCKQLNASNLDFILV----GMRSLTSLELENC-FNLRTLPDSIGLLSSLKLL 833

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
            LS++N  +LPASI  L  L +L L+ C +L SLP+LP ++  +    CASLVT    L 
Sbjct: 834 KLSRSNVESLPASIENLVKLRRLYLDHCMKLVSLPELPESLWLLSAVNCASLVTNFTQLN 893

Query: 233 LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNE 292
                   I F                L++ LE +       S+ +PG  +P+ F +  E
Sbjct: 894 --------IPF---------------QLKQGLEDLPQ-----SVFLPGDHVPERFSFHAE 925

Query: 293 GSSITV 298
           G+S+T+
Sbjct: 926 GASVTI 931


>gi|356561376|ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1049

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 122/288 (42%), Gaps = 41/288 (14%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++ +S+  L  L  L   GC  L   P     L SL+ L L  C   E   E +G++E++
Sbjct: 664 KIHVSVGFLDKLKILDADGCSKLTSFPPM--KLTSLEELKLSFCANLECFPEILGKMENV 721

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFR--GCNGPPSSASCYLPFPINLMRRSSDL--- 130
             LDI  T I+  PSSI  +  L+ +  +  G    PS+          L+ +   L   
Sbjct: 722 TSLDIKDTPIKELPSSIQHLSRLQRIKLKNGGVIQLPSTFFAMKELRYLLVNQCEGLLLP 781

Query: 131 ----GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
               G   + S+    ++  LDLS C + +  + S +    ++K LYL+ N+F  LPA I
Sbjct: 782 VENEGKEQMSSMVVENTIGYLDLSHCHISDKFLQSGLPLFSNVKELYLNGNDFTILPACI 841

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
                L +L LE C+ L  +  +PPN+E      C+SL           S C  +     
Sbjct: 842 QEFQFLTELYLEACENLHEIGWIPPNLEVFSARECSSLT----------SECRSM----- 886

Query: 247 LKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
             LL +        +EF             ++PG+ IP+WF   NE S
Sbjct: 887 --LLNEELHEADGFKEF-------------ILPGTRIPEWFECTNESS 919


>gi|357474807|ref|XP_003607689.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508744|gb|AES89886.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1043

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 185/415 (44%), Gaps = 59/415 (14%)

Query: 36   KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
            KNL+++P +     +L+ L+L GC K   L  ++  +  L  L++      C      L 
Sbjct: 637  KNLIKMP-HFGEFPNLERLDLEGCIKLVQLDPSLSLLTKLVYLNLKD----CKCIIGLLS 691

Query: 96   KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS--LSGLGSLTKLDLSDCG 153
             N + L+ R      SS++       N++ + S L      +   S L SL +L+LS C 
Sbjct: 692  NNPRPLNIRA---SHSSSTTPSSLKRNMLPKHSSLQTPTTHTNLFSSLHSLCELNLSFCN 748

Query: 154  LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
            L +  IP+ IG L+ L+ L L  NNFVT+P S+  L  L  L LE CK L+SLP LP   
Sbjct: 749  LLQ--IPNAIGCLYWLEALNLGGNNFVTVP-SLRELSKLVYLSLEHCKLLKSLPVLPSPT 805

Query: 214  EKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK----NGLAISMLREFLEVVSA 269
              +  +   + +   G      +   I  F+ +   LG+    + +  S + +F++    
Sbjct: 806  -AIEHDLYKNNLPAFG------TRWPIGLFIFNCPKLGETERWSSMTFSWMIQFIQANRQ 858

Query: 270  PSH----KFSIVVPGSEIPKWFMYQNEGSSITV-TRPSYLCNMNQVVGYAACRVFHV-PK 323
             SH    +  IV PGSE+P WF  Q++G+ I + + P    N N +VG   C VF + P+
Sbjct: 859  FSHDSSDRVQIVTPGSEMPSWFNNQSKGNLIRIDSSPIMHDNNNNIVGCVCCVVFSMTPR 918

Query: 324  HSTGIRRF-----------YRYPHPAHV------LHCSMDEKFGHRGSDHLWLLYLPRQS 366
                +RR            +   H   +      +  +++++     S+H+WL Y P   
Sbjct: 919  SHPTMRRSSPSRQTYLGLEFTDTHGRVIEKSNTGIQVTLNDRLITAKSNHIWLTYFPLD- 977

Query: 367  YYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDET 421
                      S+    +   +  ++    +   ++VK CG+   Y  +++EF+ T
Sbjct: 978  --------LSSDLLNRTLWVDTSRY---ENDLKIEVKNCGYRWVYKQDLQEFNLT 1021


>gi|105922395|gb|ABF81414.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1282

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 140/322 (43%), Gaps = 58/322 (18%)

Query: 97  NLKTLSFRGCNG-----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           NL++L   GC       P       L + +NLM   S     +LPS   + SL    L  
Sbjct: 723 NLESLILEGCTSLSEVHPSLGYHKKLQY-VNLMDCES---VRILPSNLEMESLKVCILDG 778

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
           C   E   P  +GN++ L  L L       L +SI+ L  LE L ++ CK L+S+P    
Sbjct: 779 CSKLE-KFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIP---- 833

Query: 212 NVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPS 271
                     +S+  L    KL    C+  +F +  + LGK    +  L EF + +S P 
Sbjct: 834 ----------SSIGCLKSLKKLDLFGCS--EFENIPENLGK----VESLEEF-DGLSNPR 876

Query: 272 HKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
             F I +PG+EIP WF +Q+ GSSI+V  PS+       +G+ AC  F     S  +   
Sbjct: 877 PGFGIAIPGNEIPGWFNHQSMGSSISVQVPSW------SMGFVACVAFSANGESPSLFCH 930

Query: 332 YR------YPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSF 384
           ++      YP P   + C+  +      SDH+WL YL         +W  ES ++  LSF
Sbjct: 931 FKANGRENYPSPM-CISCNYIQVL----SDHIWLFYLSFDHLKELKEWKHESYSNIELSF 985

Query: 385 MDEREKHCPAGSGTGLKVKRCG 406
              +          G+KVK CG
Sbjct: 986 HSFQ---------PGVKVKNCG 998



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 55/79 (69%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD T I+E+  SI  L GL  L++K CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 792 MNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCS 851

Query: 61  KFENLLETVGQVESLEELD 79
           +FEN+ E +G+VESLEE D
Sbjct: 852 EFENIPENLGKVESLEEFD 870


>gi|168030211|ref|XP_001767617.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681146|gb|EDQ67576.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 556

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P S+  L+ LV+L L GC++L  LP ++++L SL  LNL GC   E L E++G + 
Sbjct: 44  LKALPESMGNLNSLVELDLGGCESLDALPESMDNLNSLVELNLGGCESLEALPESMGNLN 103

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSS 128
           SL +LD+ G  ++   P S+  + +L  L   GC      P S  +      ++L R   
Sbjct: 104 SLVKLDLYGCESLEALPESMGNLNSLVKLYLHGCRSLKALPESMGNLNSLVELDL-RGCE 162

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
            L AL   S+  L SL +LDL  CG    A+P  +GNL+SL  L L    +   LP S+ 
Sbjct: 163 SLEALP-ESMGNLNSLVELDLYGCG-SLKALPESMGNLNSLVELNLYGCGSLEALPESMG 220

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
            L +L KL L  CK L++LP+   N++ ++ N
Sbjct: 221 NLNSLVKLDLRGCKTLEALPESIGNLKNLKFN 252



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 112/228 (49%), Gaps = 18/228 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
             +K +P SI  L+ L+ L L  C +L  LP +I +L SL  LNL  C   E LLE++G 
Sbjct: 329 VSLKALPESIGNLNSLLDLYLYTCGSLKALPESIGNLNSLVKLNLGVCQSLEALLESIGN 388

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
             SL +LD+    +++  P SI  + +L  L+  GC    +     L   I  +    DL
Sbjct: 389 FNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCQSLEA-----LQESIGNLNSLVDL 443

Query: 131 ---GALMLP----SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
              G + L     S+  L SL  LDL  CG    A+P  IGNL+SL    L    +   L
Sbjct: 444 NLYGCVSLKALPESIGNLNSLMDLDLYTCG-SLKALPESIGNLNSLVKFNLGVCQSLEAL 502

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
           P SI  L +L KL L  CK L++LP+   N+    K+ + GC SL  L
Sbjct: 503 PKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEAL 550



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++ +P SI  L+ LV+L L+ CK+L  LP +I +L SL  LNL GC   E L E++G + 
Sbjct: 259 LEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPESIGNLN 318

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSS 128
           SL +L++ G  +++  P SI  + +L  L    C      P S  +      +NL    S
Sbjct: 319 SLVDLNLYGCVSLKALPESIGNLNSLLDLYLYTCGSLKALPESIGNLNSLVKLNLGVCQS 378

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
            L AL L S+    SL KLDL  C     A+P  IGNL+SL  L L    +   L  SI 
Sbjct: 379 -LEAL-LESIGNFNSLVKLDLRVCK-SLKALPESIGNLNSLVKLNLYGCQSLEALQESIG 435

Query: 188 CLFNLEKLKLEDCKRLQSLPQ 208
            L +L  L L  C  L++LP+
Sbjct: 436 NLNSLVDLNLYGCVSLKALPE 456



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 95/191 (49%), Gaps = 25/191 (13%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI   + LV+L L+ CK+L  LP +I +L SL  LNL GC   E L E++G + SL +L+
Sbjct: 385 SIGNFNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCQSLEALQESIGNLNSLVDLN 444

Query: 80  ISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSL 138
           + G  +++  P SI  + +L  L    C    +     LP                  S+
Sbjct: 445 LYGCVSLKALPESIGNLNSLMDLDLYTCGSLKA-----LP-----------------ESI 482

Query: 139 SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKL 197
             L SL K +L  C   E A+P  IGNL+SL  L L    +   LP SI  L +L KL L
Sbjct: 483 GNLNSLVKFNLGVCQSLE-ALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNL 541

Query: 198 EDCKRLQSLPQ 208
             C+ L++LP+
Sbjct: 542 YGCRSLEALPK 552



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 28/214 (13%)

Query: 19  LSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEEL 78
           +S+  L  LV L +  C++L  LP ++ +L SL  L L GC   + L E++G + SL EL
Sbjct: 1   MSVVHLHKLVSLHVADCRSLKALPKSMGNLNSLVKLYLYGCRSLKALPESMGNLNSLVEL 60

Query: 79  DISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
           D+ G  ++   P S+  + +L  L+  GC    +     LP                  S
Sbjct: 61  DLGGCESLDALPESMDNLNSLVELNLGGCESLEA-----LP-----------------ES 98

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLK 196
           +  L SL KLDL  C   E A+P  +GNL+SL  LYL    +   LP S+  L +L +L 
Sbjct: 99  MGNLNSLVKLDLYGCESLE-ALPESMGNLNSLVKLYLHGCRSLKALPESMGNLNSLVELD 157

Query: 197 LEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
           L  C+ L++LP+   N+    ++ + GC SL  L
Sbjct: 158 LRGCESLEALPESMGNLNSLVELDLYGCGSLKAL 191



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 19/226 (8%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++ +P SI  L  L +  L  C++L  LP +I +L SL  L+L  C   + L E++G + 
Sbjct: 236 LEALPESIGNLKNL-KFNLGVCQSLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLN 294

Query: 74  SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-- 130
           SL +L++ G  ++   P SI  + +L  L+  GC    +     LP  I  +    DL  
Sbjct: 295 SLVKLNLYGCRSLEALPESIGNLNSLVDLNLYGCVSLKA-----LPESIGNLNSLLDLYL 349

Query: 131 ---GAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
              G+L  LP S+  L SL KL+L  C   E  + S IGN +SL  L L    +   LP 
Sbjct: 350 YTCGSLKALPESIGNLNSLVKLNLGVCQSLEALLES-IGNFNSLVKLDLRVCKSLKALPE 408

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEK-VRVN--GCASLVTL 227
           SI  L +L KL L  C+ L++L +   N+   V +N  GC SL  L
Sbjct: 409 SIGNLNSLVKLNLYGCQSLEALQESIGNLNSLVDLNLYGCVSLKAL 454



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 24/147 (16%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L+ LV L L GC +L  LP +I +L SL  L+L  C   + L E++G + SL + +
Sbjct: 433 SIGNLNSLVDLNLYGCVSLKALPESIGNLNSLMDLDLYTCGSLKALPESIGNLNSLVKFN 492

Query: 80  ISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSL 138
           +    ++   P SI  + +L  L  R C    +     LP                  S+
Sbjct: 493 LGVCQSLEALPKSIGNLNSLVKLDLRVCKSLKA-----LP-----------------ESI 530

Query: 139 SGLGSLTKLDLSDCGLGEGAIPSDIGN 165
             L SL KL+L  C   E A+P  IGN
Sbjct: 531 GNLNSLVKLNLYGCRSLE-ALPKSIGN 556



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           ++ +P SI  L+ LV+L L+ CK+L  LP +I +L SL  LNL GC   E L +++G 
Sbjct: 499 LEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPKSIGN 556



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+ LV+  L  C++L  LP +I +L SL  L+L  C   + L E++G + 
Sbjct: 475 LKALPESIGNLNSLVKFNLGVCQSLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLN 534

Query: 74  SLEELDISGT-AIRCPPSSI 92
           SL +L++ G  ++   P SI
Sbjct: 535 SLVKLNLYGCRSLEALPKSI 554


>gi|147851963|emb|CAN81250.1| hypothetical protein VITISV_002336 [Vitis vinifera]
          Length = 482

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 65/100 (65%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L+EL LD T I+ +P SI+ L GLV L L+ CKNLV LP  + +L SL+TL + GC 
Sbjct: 307 MENLKELFLDGTSIEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCS 366

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           +  N  + +G ++ L +   +GTAI  PP SI L++NLK 
Sbjct: 367 QLNNFPKNLGSLQHLAQPHANGTAITQPPDSIVLLRNLKA 406



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 94/202 (46%), Gaps = 27/202 (13%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L++  DI   P SI  LS L+ L LK CK L   PS I+ +++L+ LNL GC + +   +
Sbjct: 198 LIEIPDISVHP-SIGKLSKLILLNLKNCKKLSSFPSIID-MEALEILNLSGCSELKKFPD 255

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
             G +E L EL ++ TAI   PSSI  +  L  L  + C+   +       FP  +M+  
Sbjct: 256 IQGNMEHLLELYLASTAIEELPSSIEHLTGLVLLDLKSCSKLEN-------FP-EMMKEM 307

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
            +L  L L   S  G                +PS I  L  L  L L    N V+LP  +
Sbjct: 308 ENLKELFLDGTSIEG----------------LPSSIDRLKGLVLLNLRNCKNLVSLPKGM 351

Query: 187 NCLFNLEKLKLEDCKRLQSLPQ 208
             L +LE L +  C +L + P+
Sbjct: 352 CTLTSLETLIVSGCSQLNNFPK 373



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 83/198 (41%), Gaps = 48/198 (24%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L EL L  T I+E+P SIE L+GLV L LK                         C 
Sbjct: 260 MEHLLELYLASTAIEELPSSIEHLTGLVLLDLKS------------------------CS 295

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K EN  E + ++E+L+EL + GT+I   PSSI  +K L  L+ R C    S     LP  
Sbjct: 296 KLENFPEMMKEMENLKELFLDGTSIEGLPSSIDRLKGLVLLNLRNCKNLVS-----LP-- 348

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                            +  L SL  L +S C       P ++G+L  L   + +     
Sbjct: 349 ---------------KGMCTLTSLETLIVSGCS-QLNNFPKNLGSLQHLAQPHANGTAIT 392

Query: 181 TLPASINCLFNLEKLKLE 198
             P SI  L NL K K+E
Sbjct: 393 QPPDSIVLLRNL-KAKIE 409



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            PS+  + +L  L+LS C       P   GN+  L  LYL+      LP+SI  L  L  
Sbjct: 230 FPSIIDMEALEILNLSGCS-ELKKFPDIQGNMEHLLELYLASTAIEELPSSIEHLTGLVL 288

Query: 195 LKLEDCKRLQSLPQLPPNVEKVR 217
           L L+ C +L++ P++   +E ++
Sbjct: 289 LDLKSCSKLENFPEMMKEMENLK 311


>gi|386336196|ref|YP_006032366.1| POPC protein [Ralstonia solanacearum Po82]
 gi|334198646|gb|AEG71830.1| POPC protein [Ralstonia solanacearum Po82]
          Length = 894

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 114/228 (50%), Gaps = 42/228 (18%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+ L +D + ++++P     L  L  L+L   K L  LPS+  +L +LKTL+L G  + 
Sbjct: 261 ALQRLTIDNSPLEKLPTGFTALPQLANLSLSDTK-LHELPSSFGNLSALKTLSLQGNPRL 319

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E+L ++ GQ+  L+ L ++G  IR  P S+    +L+TL+                    
Sbjct: 320 ESLPQSFGQLSGLQALTLTGNHIRALP-SMSGASSLQTLTV------------------- 359

Query: 123 LMRRSSDLGAL-MLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 D  AL  LP+  S LG+L  L LS+  L E  +P+DIGNL +LKTL L  N  +
Sbjct: 360 ------DEAALEKLPADFSTLGNLAHLSLSNTKLRE--LPADIGNLQALKTLTLRNNEKL 411

Query: 181 -TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
             LPASI  L +LE+L L    R + LP L         NG + L TL
Sbjct: 412 GALPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449


>gi|15230461|ref|NP_190049.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|30692207|ref|NP_850654.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6967111|emb|CAB72465.1| disease resistance protein homolog [Arabidopsis thaliana]
 gi|28973753|gb|AAO64192.1| putative disease resistance protein homolog [Arabidopsis thaliana]
 gi|332644404|gb|AEE77925.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644405|gb|AEE77926.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1214

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 28/243 (11%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D  D+KE+P SIE L+ L  L L+ C +LV+LP +IN+  +L+ L+L  C +    L 
Sbjct: 746 LSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNLQGLSLTNCSRVVK-LP 803

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            +  V +L +L +   +++   P SI    NL  L  RGC     S+   LP        
Sbjct: 804 AIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGC-----SSLVKLP-------- 850

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
                     S+  + +L + DLS+C      +PS IGNL  L  L +   +   TLP +
Sbjct: 851 ---------SSIGDMTNLKEFDLSNCS-NLVELPSSIGNLQKLFMLRMRGCSKLETLPTN 900

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
           IN L +L  L L DC +L+S P++  ++ ++R+ G A     L      + +   + + +
Sbjct: 901 IN-LISLRILDLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSITSWSRLAVYEMSYFE 959

Query: 246 SLK 248
           SLK
Sbjct: 960 SLK 962


>gi|30692215|ref|NP_850655.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644403|gb|AEE77924.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1240

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 28/243 (11%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D  D+KE+P SIE L+ L  L L+ C +LV+LP +IN+  +L+ L+L  C +    L 
Sbjct: 746 LSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNLQGLSLTNCSRVVK-LP 803

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            +  V +L +L +   +++   P SI    NL  L  RGC     S+   LP        
Sbjct: 804 AIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGC-----SSLVKLP-------- 850

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
                     S+  + +L + DLS+C      +PS IGNL  L  L +   +   TLP +
Sbjct: 851 ---------SSIGDMTNLKEFDLSNCS-NLVELPSSIGNLQKLFMLRMRGCSKLETLPTN 900

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
           IN L +L  L L DC +L+S P++  ++ ++R+ G A     L      + +   + + +
Sbjct: 901 IN-LISLRILDLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSITSWSRLAVYEMSYFE 959

Query: 246 SLK 248
           SLK
Sbjct: 960 SLK 962


>gi|255555353|ref|XP_002518713.1| Disease resistance protein RPS2, putative [Ricinus communis]
 gi|223542094|gb|EEF43638.1| Disease resistance protein RPS2, putative [Ricinus communis]
          Length = 1010

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 48/291 (16%)

Query: 134 MLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLFN 191
           +LPS    + SL  LDL+ C + +  IPS I +L  L  L L+   ++ +LP+SI  L  
Sbjct: 734 ILPSSFYKMKSLRSLDLAYCAIKQ--IPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPR 791

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL-L 250
           L  + L  C+ L+SLP+LP ++  +  N C S    L +  +  +   ++ F + L+L  
Sbjct: 792 LATMYLNSCESLRSLPELPLSLRMLFANNCKS----LESESITSNRHLLVTFANCLRLRF 847

Query: 251 GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQV 310
            +  L ++   +FL   + P  +F  + PGSE+P WF  Q+ GSS+T+  P    NM  +
Sbjct: 848 DQTALQMT---DFLVPTNVPG-RFYWLYPGSEVPGWFSNQSMGSSVTMQSP---LNMYML 900

Query: 311 VGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGS------------DHLW 358
              A C VF   K S          +    + C+ D      GS            DH+ 
Sbjct: 901 NAIAFCIVFEFKKPS----------YCCFKVECAEDHAKATFGSGQIFSPSILAKTDHVL 950

Query: 359 LLYLPRQSYY--CNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
           + +   +  Y    +   F   H + +  +E  KHC        KVKRCGF
Sbjct: 951 IWFNCTRELYKSTRIASSFYFYHSKDADKEESLKHC--------KVKRCGF 993



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 37/67 (55%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ LR L L    IK++P SIE LS L+ L L  CK L  LPS+I  L  L T+ L  C 
Sbjct: 742 MKSLRSLDLAYCAIKQIPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCE 801

Query: 61  KFENLLE 67
              +L E
Sbjct: 802 SLRSLPE 808


>gi|356577113|ref|XP_003556672.1| PREDICTED: putative disease resistance protein At4g11170-like
            [Glycine max]
          Length = 1344

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 192/472 (40%), Gaps = 100/472 (21%)

Query: 24   LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
            LS L  L+LKG  ++  LP +I  L SLK L L  C K  +L        SLE+L +  +
Sbjct: 887  LSSLADLSLKGS-SIENLPVSIKDLPSLKKLTLTECKKLRSL---PSLPPSLEDLSLDES 942

Query: 84   AIRCPPSSIFLMKNLKTLS---FRGCNGP---PSSASCYLPFPINL------MRRSSDLG 131
             I C   SI  + +LK L+   ++    P   PSS+   L     +      M+  S L 
Sbjct: 943  DIECLSLSIKDLSHLKILTLTNYKKLMSPQDLPSSSKASLLNESKVDSHLVSMKGLSHLQ 1002

Query: 132  ALMLPSLSGLGSLTKLD--LSDCGLGEG---AIPSDIGNLHSLKTLYLSK---------- 176
               L       SL +L   L +  L E     IP  I NL  L+ L + K          
Sbjct: 1003 KFPLVKWKRFHSLPELPPFLEELSLSESNIECIPKSIKNLSHLRKLAIKKCTGLRYLPEL 1062

Query: 177  -----NNFV------TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
                 + FV      +LP SI  L +L K+ L +CK+LQ LP+LPP ++      C SL 
Sbjct: 1063 PPYLKDLFVRGCDIESLPISIKDLVHLRKITLIECKKLQVLPELPPCLQSFCAADCRSL- 1121

Query: 226  TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHK------------ 273
                  ++ +SS T++  ++       N +++        +  AP               
Sbjct: 1122 ------EIVRSSKTVL--IEDRYAYYYNCISLDQNSRNNIIADAPFEAAYTSLQQGTPLG 1173

Query: 274  --FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV------------- 318
               SI +PG+EIP WF YQ+  SS+ +  P      ++ +G+A C V             
Sbjct: 1174 PLISICLPGTEIPDWFSYQSTNSSLDMEIPQQWFKDSKFLGFALCLVIGGFLQNSYEGYD 1233

Query: 319  -----FHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHR-GSDHLWLLYLPRQSY----- 367
                 +H  K +     F   P    + HC+   +      SDH+++ Y P  +      
Sbjct: 1234 PDVKCYHFVKSA-----FNSDPSVPFLGHCTTVMQVPQGFNSDHMFICYYPTFNASILQD 1288

Query: 368  YCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLK-VKRCGFHPGYMHEVEEF 418
            + ++  ++++N  RL  + + +     G    L  VK+CG  P  +   E F
Sbjct: 1289 FKDLGMYYDANSLRLRVIFKFK-----GPYQRLDIVKKCGVRPLLIANTERF 1335



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 29/217 (13%)

Query: 4   LRELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           +  L L +T IK+ P  + E L+ LV L L+ C  L  L S I+ LKSL+ L+L  C   
Sbjct: 752 MTNLDLRETAIKDFPEYLWEHLNKLVYLNLESCSMLKSLTSKIH-LKSLQKLSLRDCSSL 810

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E    T    E++  L++ GT+I+  P+S++    L TL    C          + FP  
Sbjct: 811 EEFSVTS---ENMGCLNLRGTSIKELPTSLWRNNKLFTLVLHSCKK-------LVNFPDR 860

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                        P L  L     L  +     E     +   L SL  L L  ++   L
Sbjct: 861 -------------PKLEDL----PLIFNGVSSSESPNTDEPWTLSSLADLSLKGSSIENL 903

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
           P SI  L +L+KL L +CK+L+SLP LPP++E + ++
Sbjct: 904 PVSIKDLPSLKKLTLTECKKLRSLPSLPPSLEDLSLD 940


>gi|297734812|emb|CBI17046.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 108/227 (47%), Gaps = 29/227 (12%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           R+L L    I E+P +IE    L  L L+ CKNL  LPS+I  LKSL TL   GC +  +
Sbjct: 299 RKLCLKGNAINELP-TIECPLELDSLCLRECKNLEHLPSSICELKSLTTLFCSGCSRLRS 357

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
             E V  VE+L  L + GTAI   P+SI  ++ L+ L+   C    S     LP      
Sbjct: 358 FPEIVEDVENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCTNLVS-----LP------ 406

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY-----LSKNNF 179
                       S+  L SL  LD+S C   E   P ++ +L  L+ L      LS + F
Sbjct: 407 -----------ESICNLSSLKTLDVSFCTKLE-KFPENLRSLQCLEDLRASGLNLSMDCF 454

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
            ++ A I  L  L  L+L  C+  + +P+L P++  + V+ C  L T
Sbjct: 455 SSILAGIIQLSKLRVLQLSHCQGRRQVPELRPSLRYLDVHSCTCLET 501



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 124/303 (40%), Gaps = 41/303 (13%)

Query: 130 LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
           +  ++L  + GL SL  LDLS C + EG IP++   L SL+ L L  N F ++PA IN L
Sbjct: 1   MQGVVLSDICGLYSLQVLDLSVCCIDEGGIPTEFCQLSSLQELLLIGNPFRSIPAGINQL 60

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
             L  L L  C+ L+ +P LP ++  + V+GC  L T  G L     +C           
Sbjct: 61  SRLRLLDLGYCEELRQIPALPSSLRVLDVHGCKRLETSSGLLWSSLFNC----------- 109

Query: 250 LGKNGLAISMLREFLEVVSAPSHK----FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLC 305
                     L + LE    P+ K     +++  GS IP W  +  +G+ +    P    
Sbjct: 110 -------FKSLIQDLECEIYPTEKSFAQVNLISDGSGIPNWISHHKKGAEVVAKLPQNWY 162

Query: 306 NMNQVVGYAACRVFHVPKHST-----GIRRFYRY------PHPAHVLHCSMDEKFGHRGS 354
             + ++G+    V++   + +         ++ Y           V        F     
Sbjct: 163 KNDDLLGFVLYCVYYPLDNESEETLDNDATYFEYGLTLRGREIQFVDELQFFPSFQCYVV 222

Query: 355 DHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHE 414
             +W++Y P+      ++  + SN  R    +     C    G  +KV+ CG H  Y H+
Sbjct: 223 PQMWMIYYPKLL----IEKKYHSNKCR----ELTASFCGYLRGKAVKVEECGIHLIYAHD 274

Query: 415 VEE 417
            E+
Sbjct: 275 HEQ 277



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 5/113 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E LR L LD T I+E+P SI+ L GL  L L  C NLV LP +I +L SLKTL++  C 
Sbjct: 365 VENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCTNLVSLPESICNLSSLKTLDVSFCT 424

Query: 61  KFENLLETVGQVESLEELDISG--TAIRCPPS---SIFLMKNLKTLSFRGCNG 108
           K E   E +  ++ LE+L  SG   ++ C  S    I  +  L+ L    C G
Sbjct: 425 KLEKFPENLRSLQCLEDLRASGLNLSMDCFSSILAGIIQLSKLRVLQLSHCQG 477


>gi|12056928|gb|AAG48132.1|AF322632_1 putative resistance protein [Glycine max]
          Length = 1093

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 48/351 (13%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++ E+  S+  L  L  +  +GC  L   P     L SL+++NL  C    +  E +G++
Sbjct: 656 NLVEIHDSVGFLDKLEIMNFEGCSKLETFPPI--KLTSLESINLSHCSSLVSFPEILGKM 713

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN--GPPSSASCYLPFPI--------- 121
           E++  L +  TAI   P+SI  +  L++L    C     PSS        +         
Sbjct: 714 ENITHLSLEYTAISKLPNSIRELVRLQSLELHNCGMVQLPSSIVTLRELEVLSICQCEGL 773

Query: 122 NLMRRSSDLG--ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              ++  D+   +L++PS      L +++L  C + +  I + +    ++K+L LS NNF
Sbjct: 774 RFSKQDEDVKNKSLLMPS----SYLKQVNLWSCSISDEFIDTGLAWFANVKSLDLSANNF 829

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLR--KSS 237
             LP+ I     L KL L+ C  L  +  +PPN+E +    C SL  L  A+ L   K  
Sbjct: 830 TILPSCIQECRLLRKLYLDYCTHLHEIRGIPPNLETLSAIRCTSLKDLDLAVPLESTKEG 889

Query: 238 C----TIIDFVDSLKLLGKNGLAISML------------REFL---EVVSAPSHKFSIVV 278
           C     I+D  ++L+ +     +I  L            R  L   E+  A + ++S+  
Sbjct: 890 CCLRQLILDDCENLQEIRGIPPSIEFLSATNCRSLTASCRRMLLKQELHEAGNKRYSL-- 947

Query: 279 PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIR 329
           PG+ IP+WF + + G SI+     +  N   V+      + H  KH  G++
Sbjct: 948 PGTRIPEWFEHCSRGQSISF----WFRNKFPVISLCLAGLMH--KHPFGLK 992


>gi|334186704|ref|NP_193687.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658794|gb|AEE84194.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1744

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 119/246 (48%), Gaps = 28/246 (11%)

Query: 4    LRELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L  T +KE P ++ E LS +V L L+ CK L  LP+ ++ L+ L  L L GC K 
Sbjct: 826  LKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP---PSSASCYLPF 119
            E +++      +L EL ++GTAIR  P SI  +  L TL  + CN     P       P 
Sbjct: 886  EIIVDLP---LNLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNRLRHLPMEMHNLNPL 942

Query: 120  PINLMRRSSDLGALM--LPSLSGLGSLT-------------------KLDLSDCGLGEGA 158
             +  +   S+L      LP +  L                       ++ LS        
Sbjct: 943  KVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSLYKARLQY 1002

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            IP +I  + SLKTL LS+N F  +P SI     L  L+L  C+ L+SLPQLP +++ +  
Sbjct: 1003 IPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNA 1062

Query: 219  NGCASL 224
            +GC+SL
Sbjct: 1063 HGCSSL 1068



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 4   LRELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ L L KT IKE+P S+   +S LV+L ++ C+ L  LP  ++++K L  L L GC   
Sbjct: 757 LKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCSNL 816

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           EN+ E      +L+EL ++GTA++  PS++     L+TLS                  + 
Sbjct: 817 ENIKEL---PRNLKELYLAGTAVKEFPSTL-----LETLS-----------------EVV 851

Query: 123 LMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           L+   +      LP+ +S L  L  L LS C   E  +   +    +L  LYL+      
Sbjct: 852 LLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKLEIIVDLPL----NLIELYLAGTAIRE 907

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTLLGAL 231
           LP SI  L  L+ L L++C RL+ LP    N+  ++V   + C+ L     +L
Sbjct: 908 LPPSIGDLALLDTLDLKNCNRLRHLPMEMHNLNPLKVLDLSNCSELEVFTSSL 960



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 40/220 (18%)

Query: 29  QLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCP 88
           ++ LKGC  L   P +   L+ L+ ++L  C K ++  +      S+ +L + GT IR  
Sbjct: 630 KIDLKGCLELQSFP-DTGQLQHLRIVDLSTCKKIKSFPKVP---PSIRKLHLQGTGIR-D 684

Query: 89  PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD 148
            SS+      + L+ R      SS   +    + L + SS LG+L  P +    SL  LD
Sbjct: 685 LSSLNHSSESQRLT-RKLENVSSSNQDHRKQVLKL-KDSSHLGSL--PDIVIFESLEVLD 740

Query: 149 LSDCGLGEGAIPSDI-GNLHSLKTLYLSKNNFVTLPASI-------------NC------ 188
            S C   E     DI G   +LK LYL+K     +P+S+             NC      
Sbjct: 741 FSGCSELE-----DIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDL 795

Query: 189 ------LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
                 +  L  LKL  C  L+++ +LP N++++ + G A
Sbjct: 796 PMGMSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTA 835


>gi|296089383|emb|CBI39202.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 163/415 (39%), Gaps = 86/415 (20%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + ++  S+  L  L +L  K C NL   P  ++ L SL+ LNL GC K E        
Sbjct: 8   TQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLEALNLSGCSKLEKFPVISQP 66

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +  L +L   GTAI   PSSI     L  L  + C                         
Sbjct: 67  MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCE-----------------------K 103

Query: 132 ALMLP-SLSGLGSLTKLDLSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
            L LP S+  L  L  L LS C  LG+  + SD               N   LP  ++ L
Sbjct: 104 LLSLPSSICKLAHLETLSLSGCSRLGKPQVNSD---------------NLDALPRILDRL 148

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRV-NGCASLV-------------TLLG-ALKLR 234
            +L +L+L+DC+ L++LP LP ++E +   + C SL              ++ G   +L 
Sbjct: 149 SHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVFLCFGGSIFGNCFQLT 208

Query: 235 KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
           K    +   +  +          S   +    V  P   FS V PGS IP WFM+ ++G 
Sbjct: 209 KYQSKMGPHLRRMATHFDQDRWKSAYDQQYPNVQVP---FSTVFPGSTIPDWFMHYSKGH 265

Query: 295 SITV-TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPH-PAHVLH---------- 342
            + +   P +    +  +G+A   V   PK  +  R +  Y +   H L+          
Sbjct: 266 EVDIDVDPDWY--DSSFLGFALSAVI-APKDGSITRGWSTYCNLDLHDLNSESESESESS 322

Query: 343 --CSMDEKFGHR------GSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDERE 389
             CS  +    +       SDHLWL Y+P    + + KW    +  + SF   R+
Sbjct: 323 WVCSFTDARTCQLEDTTINSDHLWLAYVPSFLGFNDKKW----SRIKFSFSTSRK 373



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M CL +L  D T I E+P SI   + LV L L+ C+ L+ LPS+I  L  L+TL+L GC
Sbjct: 67  MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGC 125


>gi|2853079|emb|CAA16929.1| resistance protein RPP5-like [Arabidopsis thaliana]
 gi|7268748|emb|CAB78954.1| resistance protein RPP5-like [Arabidopsis thaliana]
          Length = 1715

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 119/246 (48%), Gaps = 28/246 (11%)

Query: 4    LRELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L  T +KE P ++ E LS +V L L+ CK L  LP+ ++ L+ L  L L GC K 
Sbjct: 801  LKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 860

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP---PSSASCYLPF 119
            E +++      +L EL ++GTAIR  P SI  +  L TL  + CN     P       P 
Sbjct: 861  EIIVDLP---LNLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNRLRHLPMEMHNLNPL 917

Query: 120  PINLMRRSSDLGALM--LPSLSGLGSLT-------------------KLDLSDCGLGEGA 158
             +  +   S+L      LP +  L                       ++ LS        
Sbjct: 918  KVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSLYKARLQY 977

Query: 159  IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            IP +I  + SLKTL LS+N F  +P SI     L  L+L  C+ L+SLPQLP +++ +  
Sbjct: 978  IPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNA 1037

Query: 219  NGCASL 224
            +GC+SL
Sbjct: 1038 HGCSSL 1043



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 4   LRELLLDKTDIKEMPLSI-ELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ L L KT IKE+P S+   +S LV+L ++ C+ L  LP  ++++K L  L L GC   
Sbjct: 732 LKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCSNL 791

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           EN+ E      +L+EL ++GTA++  PS++     L+TLS                  + 
Sbjct: 792 ENIKEL---PRNLKELYLAGTAVKEFPSTL-----LETLS-----------------EVV 826

Query: 123 LMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           L+   +      LP+ +S L  L  L LS C   E  +   +    +L  LYL+      
Sbjct: 827 LLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKLEIIVDLPL----NLIELYLAGTAIRE 882

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTLLGAL 231
           LP SI  L  L+ L L++C RL+ LP    N+  ++V   + C+ L     +L
Sbjct: 883 LPPSIGDLALLDTLDLKNCNRLRHLPMEMHNLNPLKVLDLSNCSELEVFTSSL 935



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 40/220 (18%)

Query: 29  QLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCP 88
           ++ LKGC  L   P +   L+ L+ ++L  C K ++  +      S+ +L + GT IR  
Sbjct: 605 KIDLKGCLELQSFP-DTGQLQHLRIVDLSTCKKIKSFPKVP---PSIRKLHLQGTGIR-D 659

Query: 89  PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD 148
            SS+      + L+ R      SS   +    + L + SS LG+L  P +    SL  LD
Sbjct: 660 LSSLNHSSESQRLT-RKLENVSSSNQDHRKQVLKL-KDSSHLGSL--PDIVIFESLEVLD 715

Query: 149 LSDCGLGEGAIPSDI-GNLHSLKTLYLSKNNFVTLPASI-------------NC------ 188
            S C   E     DI G   +LK LYL+K     +P+S+             NC      
Sbjct: 716 FSGCSELE-----DIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDL 770

Query: 189 ------LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
                 +  L  LKL  C  L+++ +LP N++++ + G A
Sbjct: 771 PMGMSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTA 810


>gi|449452168|ref|XP_004143832.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1217

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 22/216 (10%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            SI  L  L+ L L  C NL +LPS++  LKSL +L+   C+K E L E    ++SL  ++
Sbjct: 820  SIGSLDKLITLQLDLCHNLEKLPSSLK-LKSLDSLSFTNCYKLEQLPEFDENMKSLRVMN 878

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL------ 133
            ++GTAIR  PSSI  +  L+ L+   C    +     LP  I+ ++   +L         
Sbjct: 879  LNGTAIRVLPSSIGYLIGLENLNLNDCANLTA-----LPNEIHWLKSLEELHLRGCSKLD 933

Query: 134  MLPSLSGLG--------SLTKLDLSDCGLGEGAIPSDIGNL-HSLKTLYLSKNNFVTLPA 184
            M P  S L          LT LDL +C +        + N+  SL+ L LS N F  LP 
Sbjct: 934  MFPPRSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTSLEKLNLSGNTFSCLP- 992

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
            S+    +L  L+L +CK LQ++ +LP ++ +V  +G
Sbjct: 993  SLQNFKSLRFLELRNCKFLQNIIKLPHHLARVNASG 1028



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 29/205 (14%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           L  L+ L L+GCKNL RLP++    KSLK LNL  C   E +++      +LE LD++  
Sbjct: 753 LDKLIILDLEGCKNLERLPTSHLKFKSLKVLNLRNCLNLEEIID-FSMASNLEILDLNTC 811

Query: 84  -AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG 142
            ++R    SI  +  L TL    C+              NL +         LPS   L 
Sbjct: 812 FSLRIIHESIGSLDKLITLQLDLCH--------------NLEK---------LPSSLKLK 848

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           SL  L  ++C   E  +P    N+ SL+ + L+      LP+SI  L  LE L L DC  
Sbjct: 849 SLDSLSFTNCYKLE-QLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCAN 907

Query: 203 LQSLP---QLPPNVEKVRVNGCASL 224
           L +LP       ++E++ + GC+ L
Sbjct: 908 LTALPNEIHWLKSLEELHLRGCSKL 932



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 40/142 (28%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LR + L+ T I+ +P SI  L GL  L L  C NL  LP+ I+ LKSL+ L+L GC 
Sbjct: 871  MKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCS 930

Query: 61   KFE--------------------------------NLLETVGQV-ESLEELDISGTAIRC 87
            K +                                + LET+  V  SLE+L++SG    C
Sbjct: 931  KLDMFPPRSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTSLEKLNLSGNTFSC 990

Query: 88   PPSSIFLMKNLKTLSF---RGC 106
             PS    ++N K+L F   R C
Sbjct: 991  LPS----LQNFKSLRFLELRNC 1008



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 32/226 (14%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L +L L+GC +L  +  ++ SL  L TL+L GC   E    +   ++SLE L++S     
Sbjct: 660 LEKLYLRGCTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKI 719

Query: 87  CPPSSIFLMKNLKTLSFR-------------------------GCNGPPSSASCYLPFP- 120
                +    NLK L  R                         GC       + +L F  
Sbjct: 720 EEIPDLSASSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPTSHLKFKS 779

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
           + ++   + L    +   S   +L  LDL+ C      I   IG+L  L TL L   +N 
Sbjct: 780 LKVLNLRNCLNLEEIIDFSMASNLEILDLNTC-FSLRIIHESIGSLDKLITLQLDLCHNL 838

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCA 222
             LP+S+  L +L+ L   +C +L+ LP+   N++ +RV   NG A
Sbjct: 839 EKLPSSLK-LKSLDSLSFTNCYKLEQLPEFDENMKSLRVMNLNGTA 883


>gi|449486541|ref|XP_004157327.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1248

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 22/216 (10%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            SI  L  L+ L L  C NL +LPS++  LKSL +L+   C+K E L E    ++SL  ++
Sbjct: 851  SIGSLDKLITLQLDLCHNLEKLPSSLK-LKSLDSLSFTNCYKLEQLPEFDENMKSLRVMN 909

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL------ 133
            ++GTAIR  PSSI  +  L+ L+   C    +     LP  I+ ++   +L         
Sbjct: 910  LNGTAIRVLPSSIGYLIGLENLNLNDCANLTA-----LPNEIHWLKSLEELHLRGCSKLD 964

Query: 134  MLPSLSGLG--------SLTKLDLSDCGLGEGAIPSDIGNL-HSLKTLYLSKNNFVTLPA 184
            M P  S L          LT LDL +C +        + N+  SL+ L LS N F  LP 
Sbjct: 965  MFPPRSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTSLEKLNLSGNTFSCLP- 1023

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
            S+    +L  L+L +CK LQ++ +LP ++ +V  +G
Sbjct: 1024 SLQNFKSLRFLELRNCKFLQNIIKLPHHLARVNASG 1059



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 40/142 (28%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LR + L+ T I+ +P SI  L GL  L L  C NL  LP+ I+ LKSL+ L+L GC 
Sbjct: 902  MKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCS 961

Query: 61   KFE--------------------------------NLLETVGQV-ESLEELDISGTAIRC 87
            K +                                + LET+  V  SLE+L++SG    C
Sbjct: 962  KLDMFPPRSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTSLEKLNLSGNTFSC 1021

Query: 88   PPSSIFLMKNLKTLSF---RGC 106
             PS    ++N K+L F   R C
Sbjct: 1022 LPS----LQNFKSLRFLELRNC 1039



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 39/248 (15%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE-------- 63
           T +K +  S+  LS LV L L+GC NL + PS+   LKSL+ LNL  C K E        
Sbjct: 669 TSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSAS 728

Query: 64  -NLLE--------------TVGQ-VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
            NL E              ++G+ ++ L  LD+ G   +   P     +++L+ L+   C
Sbjct: 729 SNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPIYTNKLESLELLNLASC 788

Query: 107 NGPPS-SASCYLPFPINLMRRSSDLGALM-------LPSLSGLGSLTKLDLSDCGLGEGA 158
               +   S +  FP +L  +S  +  L        +   S   +L  LDL+ C      
Sbjct: 789 LKLETFFDSSFRKFPSHLKFKSLKVLNLRDCLNLEEITDFSMASNLEILDLNTC-FSLRI 847

Query: 159 IPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           I   IG+L  L TL L   +N   LP+S+  L +L+ L   +C +L+ LP+   N++ +R
Sbjct: 848 IHESIGSLDKLITLQLDLCHNLEKLPSSLK-LKSLDSLSFTNCYKLEQLPEFDENMKSLR 906

Query: 218 V---NGCA 222
           V   NG A
Sbjct: 907 VMNLNGTA 914


>gi|357513713|ref|XP_003627145.1| NBS resistance protein [Medicago truncatula]
 gi|355521167|gb|AET01621.1| NBS resistance protein [Medicago truncatula]
          Length = 1108

 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 135/302 (44%), Gaps = 37/302 (12%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           LV L L  CK L  L      L SLK +++ GC    +L+E     +S+E LD+S T ++
Sbjct: 675 LVTLLLDRCKKLENLVCE-KHLTSLKNIDVNGC---SSLIEFSLSSDSIEGLDLSNTMVK 730

Query: 87  CPPSSIFLMKNLKTLSFRGC--NGPPSSASCYLPFPINLMRRSSDLGALMLPSL----SG 140
               SI  M N   L+ +G      P   S         +   S +    L  +    +G
Sbjct: 731 TLHPSIGRMSNFSWLNLQGLRLQNVPKELSHLRSLTQLWISNCSVVTKSKLEEIFECHNG 790

Query: 141 LGSLTK-LDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           L SL K L L DC  L E  +P++I +L  L  L L  +N   LP +I  L NL  L L 
Sbjct: 791 LESLLKTLVLKDCCNLFE--LPTNIDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLN 848

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASLV---TLLGALKLRKSSCTIIDFVDSLKLLGKNGL 255
           +CK L SLPQLP +++++R   C SLV   TL    K R      I F +  K+L  N L
Sbjct: 849 NCKMLVSLPQLPEHIKELRAENCTSLVEVSTLKTMSKHRNGDEKYISFKNG-KMLESNEL 907

Query: 256 AISMLREFLEVVSAPSHKFSIVV-------------------PGSEIPKWFMYQNEGSSI 296
           +++ + E   +V      ++++V                   PGS IP    Y+   S +
Sbjct: 908 SLNRITEDTILVIKSVALYNVLVDKRCSEIHSYNYDSVVVCLPGSRIPSQLKYKTSDSKL 967

Query: 297 TV 298
           T+
Sbjct: 968 TI 969



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLN 55
           L EL LD +++K +P +I+ LS L  L+L  CK LV LP     +K L+  N
Sbjct: 819 LYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKMLVSLPQLPEHIKELRAEN 870


>gi|13517468|gb|AAK28805.1|AF310960_1 resistance-like protein P2-A [Linum usitatissimum]
          Length = 1196

 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 158/364 (43%), Gaps = 103/364 (28%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV-GQVES 74
            E+P  ++ L+ LV L +  CKNL RLP  ++S        LL   + +NL  T   +++S
Sbjct: 714  EVPFHVQYLTKLVTLDINYCKNLKRLPPKLDS-------KLLKHVRMKNLEVTCCPEIDS 766

Query: 75   --LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP--PSSASCYLPFPINLMR---RS 127
              LEE D+SGT++   PS+I+ +K    L   G N    P   +    F ++L     R 
Sbjct: 767  RELEEFDLSGTSLGELPSAIYNVKQNGVLRLHGKNITKFPGITTILKRFKLSLSGTSIRE 826

Query: 128  SDLG----------ALMLP-----SLSG-------------------------------- 140
             DL            L+LP     SL+G                                
Sbjct: 827  IDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSIWNMISEELFICSSPLIESLPE 886

Query: 141  ----LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
                + +LT L +  C     +IP+ I NL SL +L L +    +LP+SI  L  L  + 
Sbjct: 887  ISEPMSTLTSLHVF-CCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFSID 945

Query: 197  LEDCKRLQS------------------------LPQLPPNVEKVRVNGCASLVTLLGALK 232
            L DCK L+S                        LP+LPPN++ + V+GC SL        
Sbjct: 946  LRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKTLNVSGCKSLQA------ 999

Query: 233  LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLE--VVSA---PSHKFSIVVPGSEIPKWF 287
            L  ++C ++ +++++   G   L  ++  EF+   +V A   PS++  +   GSE+PKWF
Sbjct: 1000 LPSNTCKLL-YLNTIHFDGCPQLDQAIPGEFVANFLVHASLSPSYERQVRCSGSELPKWF 1058

Query: 288  MYQN 291
             Y++
Sbjct: 1059 SYRS 1062



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L  L L +T IK +P SI+ L  L  + L+ CK+L  +P++I+ L  L TL++ GC 
Sbjct: 915  LRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGC- 973

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
              E ++       +L+ L++SG  +++  PS+   +  L T+ F GC
Sbjct: 974  --EIIISLPELPPNLKTLNVSGCKSLQALPSNTCKLLYLNTIHFDGC 1018


>gi|357513689|ref|XP_003627133.1| Disease resistance protein [Medicago truncatula]
 gi|355521155|gb|AET01609.1| Disease resistance protein [Medicago truncatula]
          Length = 621

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 130/296 (43%), Gaps = 30/296 (10%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           LV L L  C  L  L S    L+SL+ +N+ GC    +L E     +S+  LD+  T I 
Sbjct: 164 LVTLILDRCTKLKSLTSE-KHLRSLQKINVYGC---SSLKEFSLSSDSIASLDLRNTGIE 219

Query: 87  CPPSSIFLMKNLKTLSFRGCN--GPPSSASCYLPFPINLMRRSSDL--GALMLPSLSGLG 142
               SI  +  L  L+  G      P+  SC L     L   + D+   + +     GLG
Sbjct: 220 ILHPSINGISKLVWLNLEGLKFANLPNELSC-LGSLTKLRLSNCDIVTKSNLEDIFDGLG 278

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           SL  L L  CG     +P++I +L SL  L L   +  TLP+SI  L  L  L L++C +
Sbjct: 279 SLKILYLKYCG-NLLELPTNISSLSSLYELRLDGTDVETLPSSIKLLSELGILWLDNCIK 337

Query: 203 LQSLPQLPPNVEKVRVNGCASLVTL--LGALKLRKSSCTIIDFVDSLKLLGKNGLAISML 260
           L SLP+LP  +++     C SLV L  L A   +     I     +  ++  N  ++  +
Sbjct: 338 LHSLPELPLEIKEFHAENCTSLVNLSSLRAFSEKMEGKEIYISFKNCVMMNSNQHSLDRV 397

Query: 261 RE--FLEVVSAPSHKFSI----------------VVPGSEIPKWFMYQNEGSSITV 298
            E   L +  A  H  SI                 +PGSE+PK F Y+  GS I +
Sbjct: 398 VEDVILTMKRAAHHNRSIRYSINAHSYSYNSAVVCLPGSEVPKEFKYRTTGSEIDI 453


>gi|168030408|ref|XP_001767715.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681035|gb|EDQ67466.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 539

 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 22/229 (9%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +K +P S+  L+ LVQL L  C +L  LP ++ +L SL  LNL+GC   + LLE++G +
Sbjct: 281 SLKALPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVKLNLIGCGSLKALLESMGNL 340

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--- 128
            SL ELD+    +++  P S+  + +L  L+   C    +        P ++   +S   
Sbjct: 341 NSLVELDLGECGSLKALPESMGNLNSLVQLNLSKCGSLKA-------LPESMGNLNSLVE 393

Query: 129 -DLGAL----MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
            DLG       LP S+S L SL KL L  CG    A+P  +GNL+SLK L L    +  T
Sbjct: 394 LDLGGCESLEALPESMSNLNSLVKLYLYGCG-SLKALPKSMGNLNSLKVLNLIGCGSLKT 452

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           LP S+  L +L +L L +C  L+ LP+   N   ++K+ + GC SL  L
Sbjct: 453 LPESMGNLNSLVELYLGECGSLKVLPESMGNLNFLKKLNLYGCGSLEAL 501



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 28/221 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +K +P S+   + LV+L L GC  L  LP ++ +LKSL  LNL+GC   E L E++G +
Sbjct: 137 SLKTLPESMGNWNSLVELFLYGCGFLKALPESMGNLKSLVQLNLIGCGSLEALPESMGNL 196

Query: 73  ESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            SL ELD+    +++  P S+  + +L  L+   C    +       FP           
Sbjct: 197 NSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKA-------FP----------- 238

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
                S+  L SL +LDL  C   E A+P  +GNL+SL  LY+ +  +   LP S+  L 
Sbjct: 239 ----ESMGNLNSLVQLDLEGCESLE-ALPESMGNLNSLVGLYVIECRSLKALPESMGNLN 293

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTLL 228
           +L +L L  C  L++LP+   N+    K+ + GC SL  LL
Sbjct: 294 SLVQLNLSRCGSLKALPESMGNLNSLVKLNLIGCGSLKALL 334



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 25/208 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +K +P S+  L+ LVQL L  C +L  LP ++ +L SL  L+L GC   E L E++  +
Sbjct: 353 SLKALPESMGNLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESLEALPESMSNL 412

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            SL +L + G  +++  P S+  + +LK L+  GC    +     LP             
Sbjct: 413 NSLVKLYLYGCGSLKALPKSMGNLNSLKVLNLIGCGSLKT-----LP------------- 454

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
                S+  L SL +L L +CG     +P  +GNL+ LK L L    +   LP S+  L 
Sbjct: 455 ----ESMGNLNSLVELYLGECG-SLKVLPESMGNLNFLKKLNLYGCGSLEALPKSMGNLN 509

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           +L +L L  CK L++LP+   N++ ++V
Sbjct: 510 SLVELDLRGCKTLEALPESIGNLKNLKV 537



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 25/198 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +K +P S+  L+ LVQL L  C +L  LP ++ +L SL  LNL  C   + L E++G +
Sbjct: 17  SLKALPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVQLNLSRCGSLKALPESMGNL 76

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            SL ELD+ G  ++   P S   M NL +L               L   +N+ R    L 
Sbjct: 77  NSLVELDLGGCESLEALPES---MGNLNSL---------------LKLDLNVCRSLKALP 118

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLF 190
                S+S L SL KL+L +CG     +P  +GN +SL  L+L    F+  LP S+  L 
Sbjct: 119 E----SMSNLNSLVKLNLYECG-SLKTLPESMGNWNSLVELFLYGCGFLKALPESMGNLK 173

Query: 191 NLEKLKLEDCKRLQSLPQ 208
           +L +L L  C  L++LP+
Sbjct: 174 SLVQLNLIGCGSLEALPE 191


>gi|297850934|ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339190|gb|EFH69607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1488

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T I+ +P  I  L  + +L L  CK L RLP++I  + +L +LNL+G    E L E  G+
Sbjct: 1016 TPIEALPKEIGALHFIRKLELINCKFLKRLPNSIGDMDTLYSLNLVGS-NIEELPEDFGK 1074

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC-------NGPPSSASCYLPFPINL 123
            +E+L EL +S    ++  P S   +K+L  L  +         N    S    L      
Sbjct: 1075 LENLVELRMSNCKMLKRLPKSFGDLKSLHRLYMQETSVAELPDNFGNLSNLMVLKMLKKP 1134

Query: 124  MRRSSDLGA---------LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +RRSS+  A         + LP S S L SL +LD     +  G +  D+  L SL  L 
Sbjct: 1135 LRRSSESEAPGTSEEPRFVELPHSFSNLLSLEELDARSWRIS-GKMRDDLEKLSSLMILN 1193

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
            L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL ++    KL
Sbjct: 1194 LGNNYFHSLPSSLVGLSNLKELLLCDCRELKGLPPLPWKLEQLNLENCFSLDSIFDLSKL 1253

Query: 234  RK------SSCT-IIDF-----VDSLKLLGKNGL--AISMLRE-FLEVVSAPSHKFS--- 275
            +       ++C  ++D      + +LK L  +G   + S  RE F+  V     K S   
Sbjct: 1254 KILHELNLTNCVKVVDIPGLEHLTALKKLYMSGCNSSCSFPREDFIHNVKKRLSKASLKM 1313

Query: 276  ---IVVPGSEIPKWF 287
               + +PG+ +P WF
Sbjct: 1314 LRNLSLPGNRVPDWF 1328



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L+QL L+ C +L     +++ LK L+ L L GC     L E +G +  L+EL 
Sbjct: 812 SVGNLGKLLQLDLRRCSSLSEFLVDVSGLKCLEKLFLTGCSNLSVLPENIGSMPLLKELL 871

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SL 138
           + GTAI   P SIF ++ L+ LS  GC       SC             D     LP S+
Sbjct: 872 LDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCIGKLTSLEDLYLDDTALRNLPISI 931

Query: 139 SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
             L +L KL L  C      IP  I  L SLK L+++ +    LP     L  L+ L   
Sbjct: 932 GDLKNLQKLHLMRCT-SLSKIPDSINKLISLKELFINGSAVEELPLDTGSLLCLKDLSAG 990

Query: 199 DCKRLQSLP 207
           DCK L+ +P
Sbjct: 991 DCKFLKQVP 999



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 25/232 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPS----------------- 43
            M  L+ELLLD T I  +P SI  L  L +L+L GC+++  LPS                 
Sbjct: 864  MPLLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCIGKLTSLEDLYLDDTA 923

Query: 44   ------NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                  +I  LK+L+ L+L+ C     + +++ ++ SL+EL I+G+A+   P     +  
Sbjct: 924  LRNLPISIGDLKNLQKLHLMRCTSLSKIPDSINKLISLKELFINGSAVEELPLDTGSLLC 983

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
            LK LS   C       S        L  + +      LP  +  L  + KL+L +C   +
Sbjct: 984  LKDLSAGDCKFLKQVPSSIGGLNSLLQLQLNGTPIEALPKEIGALHFIRKLELINCKFLK 1043

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
              +P+ IG++ +L +L L  +N   LP     L NL +L++ +CK L+ LP+
Sbjct: 1044 -RLPNSIGDMDTLYSLNLVGSNIEELPEDFGKLENLVELRMSNCKMLKRLPK 1094


>gi|297791295|ref|XP_002863532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309367|gb|EFH39791.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 29/309 (9%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L L+GC  L  L ++++S KSLK+L L GC  F+         E+LE L +  TAI   P
Sbjct: 681 LNLEGCTRLESL-ADVDS-KSLKSLTLSGCTSFKKFPLIP---ENLEALHLDRTAISQLP 735

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
            ++  +K L  L+ + C    +  +C     ++ ++    L       L     + K  L
Sbjct: 736 DNVVNLKKLVLLNMKDCELLENIPTC-----VDKLKALQKLVLSGCKKLQNFPEVNKSSL 790

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQ 208
               L   AI + +  L S++ L LS N+ ++ +PA IN L  L +L L+ CK L S+P+
Sbjct: 791 KILLLDRTAIKT-MPQLPSVQYLCLSFNDHLSCIPADINQLSQLTRLDLKYCKSLTSVPE 849

Query: 209 LPPNVEKVRVNGCASLVTLLGALK----LRKSSCTIIDFVD--SLKLLGKNGLAISMLRE 262
           LPPN++    +GC++L T+   L       ++ CT  +F +  +L+   K  +A    R+
Sbjct: 850 LPPNLQYFDADGCSALKTVAKPLARIMPTVQNHCT-FNFTNCGNLEQAAKEEIASYAQRK 908

Query: 263 FLEVVSAPSHK---------FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
              +  A  H          F+   PG E+P WF +   GS + +    +  +   + G 
Sbjct: 909 CQLLSDARKHYDEGLSSEALFTTCFPGCEVPSWFCHDGVGSRLELKLLPHWHD-KSLSGI 967

Query: 314 AACRVFHVP 322
           A C V   P
Sbjct: 968 ALCAVISFP 976



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  L LD+T I ++P ++  L  LV L +K C+ L  +P+ ++ LK+L+ L L GC K
Sbjct: 719 ENLEALHLDRTAISQLPDNVVNLKKLVLLNMKDCELLENIPTCVDKLKALQKLVLSGCKK 778

Query: 62  FENLLETVGQVESLEELDISGTAIRCPP 89
            +N  E      SL+ L +  TAI+  P
Sbjct: 779 LQNFPEV--NKSSLKILLLDRTAIKTMP 804


>gi|298204612|emb|CBI23887.3| unnamed protein product [Vitis vinifera]
          Length = 1384

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 113/255 (44%), Gaps = 47/255 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
           M+ L +L L+ T IKE+P  I     L  L L  C    +                    
Sbjct: 746 MKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTS 805

Query: 41  ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
              LP +I  L+SL+ L+L  C KFE   E  G ++SL++L  +GT+I+  P SI  +++
Sbjct: 806 IKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLES 865

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM-----------LP-SLSGLGSLT 145
           L+ L    C       S +  FP     +  ++ +L            LP S+  L SL 
Sbjct: 866 LEILDLSYC-------SKFEKFP----EKGGNMKSLKKLHLKNTAIKDLPDSIGDLESLE 914

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
            LDLS C L     P   GN+ SLK L L       LP S+  L +LE L L +C + + 
Sbjct: 915 ILDLSKC-LKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEILHLSECSKFEK 973

Query: 206 LPQLPPNVEKVRVNG 220
            P+   N++K+   G
Sbjct: 974 FPEKGGNMKKISGEG 988



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 159/419 (37%), Gaps = 124/419 (29%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
            M+ L++L  + T IK++P SI  L  L  L L  C    +                    
Sbjct: 840  MKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTA 899

Query: 41   ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               LP +I  L+SL+ L+L  C KFE   E  G ++SL++L +  TAI+  P S+  +++
Sbjct: 900  IKDLPDSIGDLESLEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLES 959

Query: 98   LKTLSFRGCNGPPSSASCYLPFPI---NLMRRSSD------LGALML---------PSLS 139
            L+ L    C       S +  FP    N+ + S +      + A+ L          S+ 
Sbjct: 960  LEILHLSEC-------SKFEKFPEKGGNMKKISGEGREHEKIKAVSLINTAIKDLPDSIG 1012

Query: 140  GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI------------- 186
             L SL  LDLS+C   E   P   GN+ SLK LYL       LP SI             
Sbjct: 1013 DLESLESLDLSECSKFE-KFPEKGGNMKSLKELYLINTAIKDLPDSIGGLESLKILNLKN 1071

Query: 187  --------------------------------NCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
                                            N L NL+K  +  C+  + +P LP ++E
Sbjct: 1072 TAIKDLPNISRLKFLKRLILCDRSDMWEGLISNQLCNLQKPNISQCEMARQIPVLPSSLE 1131

Query: 215  KVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA--PSH 272
            ++  + C S   L G L L    C                      R +L+  +    S 
Sbjct: 1132 EIDAHHCTSKEDLSGLLWL----CH---------------------RNWLKSTAEELKSW 1166

Query: 273  KFSIVVPGSE-IPKW-FMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIR 329
            K S  +P S  I +W   YQN GS +T   P         +G+    V+  P H + ++
Sbjct: 1167 KLSARIPESSGIQEWRIRYQNLGSEVTAKLPMNWYEDPDFLGFFVSCVYQ-PSHKSTLK 1224



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 107/217 (49%), Gaps = 23/217 (10%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE---TVGQVESLE 76
           S+  L  L  L L+GC  L  LPS+I++L++L+ L+L  C  F+   E     G + SL 
Sbjct: 645 SVGDLKKLTTLDLRGCVKLKGLPSSISNLEALECLDLTRCSSFDKFAEIQGIQGNMSSLT 704

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN--LMRRSSDL---- 130
            L +  TAIR  PSSI L ++++ L    C       S +  FP N   M+  +DL    
Sbjct: 705 HLYLRKTAIRELPSSIDL-ESVEILDLSDC-------SKFEKFPENGANMKSLNDLRLEN 756

Query: 131 -GALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                LP+ ++   SL  LDLS C   E   P   GN+ SLK L  +  +   LP SI  
Sbjct: 757 TAIKELPTGIANWESLEILDLSYCSKFE-KFPEKGGNMKSLKKLRFNGTSIKDLPDSIGD 815

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNV---EKVRVNGCA 222
           L +LE L L  C + +  P+   N+   +K+R NG +
Sbjct: 816 LESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTS 852


>gi|298953299|gb|ADI99934.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 1178

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 154/370 (41%), Gaps = 86/370 (23%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M+ LR L LD T IKE+P SI  L+ L  L L GC NL+ LP+ I  L+SL+ L L GC 
Sbjct: 772  MKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLPNTIYLLRSLENLLLSGC- 830

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                                          SIF M       F     P     C    P
Sbjct: 831  ------------------------------SIFGM-------FPDKWNPTIQPVCS---P 850

Query: 121  INLMRRSSDLGALMLPSL----SGLGSLTKLDLSDCGLGEG---AIPSDIGNLHSLKTLY 173
              +M  +  L +L +P            T LDL  C +       I  D+     L  L 
Sbjct: 851  SKMMETA--LWSLKVPHFLVPNESFSHFTLLDLQSCNISNANFLDILCDVAPF--LSDLR 906

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
            LS+N F +LP+ ++   +L  L+L +CK LQ +P LP +++K+   GC SL  +      
Sbjct: 907  LSENKFSSLPSCLHKFMSLWNLELRNCKFLQEIPSLPESIQKMDACGCESLSRIPD---- 962

Query: 234  RKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEG 293
                  I+D +   + L    ++    REFL             + G EIP+WF Y+   
Sbjct: 963  -----NIVDIISKKQDLTMGEIS----REFL-------------LTGIEIPEWFSYKTTS 1000

Query: 294  SSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHV---LHCSMDEKFG 350
            + ++ +   Y  +M + +  AAC  F V  +S+   R  R      V   L+ S+   F 
Sbjct: 1001 NLVSASFRHY-PDMERTL--AACVSFKVNGNSS--ERGARISCNIFVCNRLYFSLSRPFL 1055

Query: 351  HRGSDHLWLL 360
               S+++WL+
Sbjct: 1056 PSKSEYMWLV 1065



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL L   T++  +  S+  L  L  L L GC NL +LP     L SLK LNL  C K 
Sbjct: 633 LEELYLTNCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKKL 692

Query: 63  ENL--LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           E +  L +   + SL   +   T +R    S+  +  L+ L  + C              
Sbjct: 693 EKIPDLSSASNLTSLHIYEC--TNLRVIHESVGSLDKLEGLYLKQCT------------- 737

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            NL++  S L    L  LS  G         C L   + P+   N+ SL+TL L      
Sbjct: 738 -NLVKLPSYLSLKSLLCLSLSGC--------CKL--ESFPTIAKNMKSLRTLDLDFTAIK 786

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLP 207
            LP+SI  L  L  LKL  C  L SLP
Sbjct: 787 ELPSSIRYLTELWTLKLNGCTNLISLP 813


>gi|5823587|emb|CAB53785.1| disease resistance protein RPS4-Ler [Arabidopsis thaliana]
          Length = 1217

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 31/325 (9%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +K  P  ++ +  L  L LKGC +L  LP    +L SLKTL L GC  F+        
Sbjct: 694  TTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLISDN 751

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E+L    + GTAI   P ++  ++ L  L+ + C          +P  +  ++    L 
Sbjct: 752  IETLY---LDGTAISQLPMNMEKLQRLVVLNMKDCKMLEE-----IPGRVGELKA---LQ 800

Query: 132  ALMLPSLSGLGSLTKLDLS--DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINC 188
             L+L     L    ++D+S  +  L +G     +  L S++ L LS+N  ++ LP  I+ 
Sbjct: 801  ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIIDF 243
            L  L+ L L+ C  L S+P+ PPN++ +  +GC+SL T+   L       +  S  I   
Sbjct: 861  LSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTN 920

Query: 244  VDSLKLLGKNGLA---------ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
             ++L+   K  +          +S  R+           FS   PG E+P WF ++  GS
Sbjct: 921  CENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGS 980

Query: 295  SITVTRPSYLCNMNQVVGYAACRVF 319
             + V    +  +  ++ G A C V 
Sbjct: 981  ELEVKLLPHWHD-KKLAGIALCAVI 1004



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 22/138 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-- 61
           +  L LD T I ++P+++E L  LV L +K CK L  +P  +  LK+L+ L L  C    
Sbjct: 752 IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811

Query: 62  --------FENLL-------ETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRG 105
                   F N+L       E + Q+ S++ L +S  A I C P  I  +  LK L  + 
Sbjct: 812 IFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 106 CNGPPSSASCYLPFPINL 123
           C    +S +    FP NL
Sbjct: 872 C----TSLTSVPEFPPNL 885


>gi|317415955|emb|CAR94520.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 806

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 1/88 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNI-NSLKSLKTLNLLGC 59
           M+ LR+L LD T I+E+P SIE LSGL  L L+ CKNL+ LP  + +SL SL+ LNL GC
Sbjct: 706 MKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGC 765

Query: 60  FKFENLLETVGQVESLEELDISGTAIRC 87
              + L + +G +E L+ELD SGTAIR 
Sbjct: 766 SNLDKLPDNLGSLECLQELDASGTAIRA 793



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 67/146 (45%), Gaps = 23/146 (15%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L QL LKGC +L  +P  IN L+SL    L GC K E L E    ++ L +L + GTAI 
Sbjct: 662 LEQLILKGCTSLSEVPDIIN-LRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDGTAIE 720

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             P+SI  +  L  L  R C          L  P  L      L +L + +LSG  +L K
Sbjct: 721 ELPTSIEHLSGLTLLDLRDCKN-------LLSLPDVL---CDSLTSLQVLNLSGCSNLDK 770

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTL 172
           L            P ++G+L  L+ L
Sbjct: 771 L------------PDNLGSLECLQEL 784



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           +P +  L SLT   LS C   E  +P    ++  L+ L+L       LP SI  L  L  
Sbjct: 676 VPDIINLRSLTNFILSGCSKLE-KLPEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLTL 734

Query: 195 LKLEDCKRLQSLPQL----PPNVEKVRVNGCASLVTL---LGALK 232
           L L DCK L SLP +      +++ + ++GC++L  L   LG+L+
Sbjct: 735 LDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCSNLDKLPDNLGSLE 779


>gi|224121242|ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1360

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 115/237 (48%), Gaps = 37/237 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-------------------- 40
           M  L+EL++D+T I  +P S+  L+ L +L+L  CK + R                    
Sbjct: 756 MNSLKELVVDETAISMLPQSLYRLTKLEKLSLNDCKFIKRLPERLGNLISLKELSLNHSA 815

Query: 41  ---LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
              LP +I SL +L+ L+L+ C     + E++  ++SL E+ I+ +AI+  P++I  +  
Sbjct: 816 VEELPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQSLMEVSITSSAIKELPAAIGSLPY 875

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-----GALMLP-SLSGLGSLTKLDLSD 151
           LKTL   GC+         LP  I  +   S+L         LP  + GL  + KL L  
Sbjct: 876 LKTLFAGGCH-----FLSKLPDSIGGLASISELELDGTSISELPEQIRGLKMIEKLYLRK 930

Query: 152 C-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           C  L E  +P  IGN+ +L T+ L   N   LP S   L NL  L L++CKRL  LP
Sbjct: 931 CTSLRE--LPEAIGNILNLTTINLFGCNITELPESFGRLENLVMLNLDECKRLHKLP 985



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 45/324 (13%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  + EL LD T I E+P  I  L  + +L L+ C +L  LP  I ++ +L T+NL GC 
Sbjct: 897  LASISELELDGTSISELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGC- 955

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
                L E+ G++E+L  L++     +   P SI  +K+L  L          +A   LP 
Sbjct: 956  NITELPESFGRLENLVMLNLDECKRLHKLPVSIGNLKSLCHLLME------KTAVTVLPE 1009

Query: 120  ----------------PINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSD 162
                            P+  +R    L  ++LP S S L  L +L+     +  G +P D
Sbjct: 1010 NFGNLSSLMILKMQKDPLEYLRTQEQL--VVLPNSFSKLSLLEELNARAWRIS-GKLPDD 1066

Query: 163  IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
               L SL  L L  NNF +LP+S+  L  L KL L  C+ L+SLP LPP++E++ V+ C 
Sbjct: 1067 FEKLSSLDILDLGHNNFSSLPSSLCGLSLLRKLLLPHCEELKSLPPLPPSLEELDVSNCF 1126

Query: 223  SLVTLLGALKLRK------SSC-TIIDF--VDSLKLLGK------NGLAISMLREFLEVV 267
             L T+     L +      ++C  ++D   +  LK L +         ++++ R   +V 
Sbjct: 1127 GLETISDVSGLERLTLLNITNCEKVVDIPGIGCLKFLKRLYMSSCKACSLTVKRRLSKVC 1186

Query: 268  SAPSHKFSIVVPGSEIPKWFMYQN 291
                   S+  PGS+ P WF  +N
Sbjct: 1187 LRNIRNLSM--PGSKFPDWFSQEN 1208



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 47/190 (24%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+QL L  C NLV  P +++ L+ L+ L L  C K E L + +G + SL+EL +  TAI 
Sbjct: 711 LLQLNLDKCINLVEFPRDVSGLRLLQNLILSSCLKLEELPQDIGSMNSLKELVVDETAIS 770

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             P S++ +  L+ LS   C                 ++R                    
Sbjct: 771 MLPQSLYRLTKLEKLSLNDC---------------KFIKR-------------------- 795

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
                       +P  +GNL SLK L L+ +    LP SI  L NLEKL L  C+ L ++
Sbjct: 796 ------------LPERLGNLISLKELSLNHSAVEELPDSIGSLSNLEKLSLMRCQSLTTI 843

Query: 207 PQLPPNVEKV 216
           P+   N++ +
Sbjct: 844 PESIRNLQSL 853



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 47/182 (25%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L+ + L+ C NL   P +++  K L+ L+  GC +   + E++G V +L +L++     +
Sbjct: 664 LMVMNLRRCYNLEASP-DLSGCKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLD----K 718

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
           C                                 INL+    D+        SGL  L  
Sbjct: 719 C---------------------------------INLVEFPRDV--------SGLRLLQN 737

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           L LS C L    +P DIG+++SLK L + +     LP S+  L  LEKL L DCK ++ L
Sbjct: 738 LILSSC-LKLEELPQDIGSMNSLKELVVDETAISMLPQSLYRLTKLEKLSLNDCKFIKRL 796

Query: 207 PQ 208
           P+
Sbjct: 797 PE 798


>gi|15242354|ref|NP_199338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5459305|emb|CAB50708.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|10176996|dbj|BAB10246.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007838|gb|AED95221.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 31/324 (9%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +K  P  ++ +  L  L LKGC +L  LP    +L SLKTL L GC  F+        
Sbjct: 694  TTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLISDN 751

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E+L    + GTAI   P ++  ++ L  L+ + C          +P  +  ++    L 
Sbjct: 752  IETLY---LDGTAISQLPMNMEKLQRLVVLNMKDCKMLEE-----IPGRVGELKA---LQ 800

Query: 132  ALMLPSLSGLGSLTKLDLS--DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINC 188
             L+L     L    ++D+S  +  L +G     +  L S++ L LS+N  ++ LP  I+ 
Sbjct: 801  ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIIDF 243
            L  L+ L L+ C  L S+P+ PPN++ +  +GC+SL T+   L       +  S  I   
Sbjct: 861  LSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTN 920

Query: 244  VDSLKLLGKNGLA---------ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
             ++L+   K  +          +S  R+           FS   PG E+P WF ++  GS
Sbjct: 921  CENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGS 980

Query: 295  SITVTRPSYLCNMNQVVGYAACRV 318
             + V    +  +  ++ G A C V
Sbjct: 981  ELEVKLLPHWHD-KKLAGIALCAV 1003



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 22/138 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-- 61
           +  L LD T I ++P+++E L  LV L +K CK L  +P  +  LK+L+ L L  C    
Sbjct: 752 IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811

Query: 62  --------FENLL-------ETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRG 105
                   F N+L       E + Q+ S++ L +S  A I C P  I  +  LK L  + 
Sbjct: 812 IFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 106 CNGPPSSASCYLPFPINL 123
           C    +S +    FP NL
Sbjct: 872 C----TSLTSVPEFPPNL 885


>gi|359493349|ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 170/438 (38%), Gaps = 95/438 (21%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T + ++  S+  L  L +L  K C NL   P  ++ L SL+ LNL GC K E        
Sbjct: 672  TQLHKIHSSLGDLDKLCRLNFKNCINLEHFPG-LDQLVSLEALNLSGCSKLEKFPVISQP 730

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +  L +L   GTAI   PSSI     L  L  + C                         
Sbjct: 731  MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCE-----------------------K 767

Query: 132  ALMLP-SLSGLGSLTKLDLSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
             L LP S+  L  L  L LS C  LG+  + SD               N   LP  ++ L
Sbjct: 768  LLSLPSSICKLAHLETLSLSGCSRLGKPQVNSD---------------NLDALPRILDRL 812

Query: 190  FNLEKLKLEDCKRLQSLPQLPPNVEKVRV-NGCASLV-------------TLLG-ALKLR 234
             +L +L+L+DC+ L++LP LP ++E +   + C SL              ++ G   +L 
Sbjct: 813  SHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVFLCFGGSIFGNCFQLT 872

Query: 235  KSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
            K    +   +  +          S   +    V  P   FS V PGS IP WFM+ ++G 
Sbjct: 873  KYQSKMGPHLRRMATHFDQDRWKSAYDQQYPNVQVP---FSTVFPGSTIPDWFMHYSKGH 929

Query: 295  SITV-TRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPH-PAHVLH---------- 342
             + +   P +    +  +G+A   V   PK  +  R +  Y +   H L+          
Sbjct: 930  EVDIDVDPDWY--DSSFLGFALSAVI-APKDGSITRGWSTYCNLDLHDLNSESESESESS 986

Query: 343  --CSMDEKFGHR------GSDHLWLLYLPRQSYYCNVKWHFESNHFRLSFMDEREKHCPA 394
              CS  +    +       SDHLWL Y+P    + + KW    +  + SF   R K C  
Sbjct: 987  WVCSFTDARTCQLEDTTINSDHLWLAYVPSFLGFNDKKW----SRIKFSFSTSR-KSCI- 1040

Query: 395  GSGTGLKVKRCGFHPGYM 412
                   VK  G  P Y+
Sbjct: 1041 -------VKHWGVCPLYI 1051



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M CL +L  D T I E+P SI   + LV L L+ C+ L+ LPS+I  L  L+TL+L GC
Sbjct: 731 MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGC 789


>gi|255537137|ref|XP_002509635.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223549534|gb|EEF51022.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1034

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +R L L  T I+E+P S+  LS LV L L  C  L  LP++I  +KSL+ L L GC   +
Sbjct: 714 IRFLYLYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSLPTSICKIKSLELLCLSGCTNLK 773

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           +  E    ++ L EL + GTAI   P S+  +K L +LS   C     +  C LP  I+ 
Sbjct: 774 HFPEISETMDCLVELYLDGTAIADLPLSVENLKRLSSLSLSNCR----NLVC-LPESISK 828

Query: 124 MRRSSDLGALMLPSLSGLGS--LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
           ++  S L     P L  L    +  L+L   G     + SD+  L  L  L LSK  F T
Sbjct: 829 LKHLSSLDFSDCPKLEKLPEELIVSLELIARGCHLSKLASDLSGLSCLSFLDLSKTKFET 888

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           LP SI  L  L  L +  C RL+SLP L  +++ ++ 
Sbjct: 889 LPPSIKQLSQLITLDISFCDRLESLPDLSLSLQFIQA 925



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            PS  GL SL  L+LSDC   E   P D+    S++ LYL       +P+S+ CL  L  
Sbjct: 684 FPSTIGLDSLETLNLSDCVKLE-RFP-DVS--RSIRFLYLYGTAIEEVPSSVGCLSRLVS 739

Query: 195 LKLEDCKRLQSLPQLPPNVEKVR---VNGCASL 224
           L L DC +L+SLP     ++ +    ++GC +L
Sbjct: 740 LNLFDCTKLKSLPTSICKIKSLELLCLSGCTNL 772


>gi|237769815|dbj|BAH59426.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 31/324 (9%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +K  P  ++ +  L  L LKGC +L  LP    +L SLKTL L GC  F+        
Sbjct: 694  TTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLISDN 751

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E+L    + GTAI   P ++  ++ L  L+ + C          +P  +  ++    L 
Sbjct: 752  IETLY---LDGTAISQLPMNMEKLQRLVVLNMKDCKMLEE-----IPGRVGELKA---LQ 800

Query: 132  ALMLPSLSGLGSLTKLDLS--DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINC 188
             L+L     L    ++D+S  +  L +G     +  L S++ L LS+N  ++ LP  I+ 
Sbjct: 801  ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIIDF 243
            L  L+ L L+ C  L S+P+ PPN++ +  +GC+SL T+   L       +  S  I   
Sbjct: 861  LSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTN 920

Query: 244  VDSLKLLGKNGLA---------ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGS 294
             ++L+   K  +          +S  R+           FS   PG E+P WF ++  GS
Sbjct: 921  CENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGS 980

Query: 295  SITVTRPSYLCNMNQVVGYAACRV 318
             + V    +  +  ++ G A C V
Sbjct: 981  ELEVKLLPHWHD-KKLAGIALCAV 1003



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 22/138 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-- 61
           +  L LD T I ++P+++E L  LV L +K CK L  +P  +  LK+L+ L L  C    
Sbjct: 752 IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811

Query: 62  --------FENLL-------ETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRG 105
                   F N+L       E + Q+ S++ L +S  A I C P  I  +  LK L  + 
Sbjct: 812 IFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 106 CNGPPSSASCYLPFPINL 123
           C    +S +    FP NL
Sbjct: 872 C----TSLTSVPEFPPNL 885


>gi|342365828|gb|AEL30361.1| NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1119

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 143/355 (40%), Gaps = 77/355 (21%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++KEMP  +     L  L L GC+ L     ++   KSL  LNL GC + E L + + ++
Sbjct: 427 ELKEMP-DLSGAPNLKTLDLDGCEELNYFHPSLAHHKSLVELNLRGCERLETLGDKL-EM 484

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFR--GCNGPPSS------------ASCY- 116
            SLE LD+   +++R  P     MK L  L  +  G    P++              CY 
Sbjct: 485 SSLERLDLECCSSLRRLPEFGKCMKQLSILILKRTGIEELPTTLGNLAGMSELDLTGCYK 544

Query: 117 ---LPFPINLMRRSSDLGALMLPSLS-------GLGSLTKLDLSD--------------- 151
              LPFP+        L    L  LS       GL SLT  D S                
Sbjct: 545 LTSLPFPLGCFVGLKKLRLSRLVELSCVPYSTHGLESLTVKDYSGSPNIVGLLCSLSHLT 604

Query: 152 ---------CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
                    C        +D G L SL  L LS+NNF+ +P SI+ L  L +LKL +C+R
Sbjct: 605 SLSSLKLQGCFSTSREESTDFGRLASLTDLDLSENNFLRVPISIHELPRLTRLKLNNCRR 664

Query: 203 LQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE 262
           L+ LP+LP ++ +++   C                       DSL     N + +     
Sbjct: 665 LKVLPELPLSLRELQARDC-----------------------DSLDASNANDVILKACCG 701

Query: 263 FLEVVSAPSHK-FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAAC 316
           F E  S      F +     +IP WF +  EG+ ++V+  S+ C   + +  A C
Sbjct: 702 FAESASQDREDLFQMWFSRKKIPAWFEHHEEGNGVSVS-FSHNCPSTETIALALC 755


>gi|227438283|gb|ACP30631.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1241

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 157/340 (46%), Gaps = 42/340 (12%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T ++E+P  +E +  LV L ++GC +L  LP    +L S+KTL L  C    + L+T   
Sbjct: 683  TSLEELPREMERMKCLVFLNMRGCTSLRVLPHM--NLISMKTLILTNC----SSLQTFRV 736

Query: 72   V-ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY-------------- 116
            V ++LE L + G+AI   P++++ ++ L  L+ + C        C               
Sbjct: 737  VSDNLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGKLKALQELVLSGC 796

Query: 117  ---LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG-AIPSDIGNLHSLKTL 172
                 FPI +    S L  L+L   S       L L+   + +   +   +  + SL+ L
Sbjct: 797  SKLKTFPIRIENMKS-LQLLLLDGTSITDMPKILQLNSSKVEDWPELRRGMNGISSLQRL 855

Query: 173  YLSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL 231
             LS N+ +T L   I+ L +L+ L L+ CK L S+P LPPNVE +  +GC  L T+   +
Sbjct: 856  CLSGNDIITNLRIDISLLCHLKLLDLKFCKNLTSIPLLPPNVEILDAHGCGKLKTVATPM 915

Query: 232  KLRK-----SSCTIIDFVDSLKLLGKNGLA--------ISMLREFLEVVSAPSHKFSIVV 278
             + K      S  I    +SL+   KN +         +  LR + E   A    F    
Sbjct: 916  AILKHMEKVHSKFIFTNCNSLEQAAKNSITTYAQKKSQLDALRCYKE-GHASEALFITSF 974

Query: 279  PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            PGSE+P WF ++  GS++ +  P + C+ N++     C V
Sbjct: 975  PGSEVPSWFDHRMIGSTLKLKFPPHWCD-NRLSTIVLCAV 1013



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 29/240 (12%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L +LP + N  K+L  LN+    + E L E V     L+ +D+S ++  C  + +   ++
Sbjct: 616 LKKLPKDFNP-KNLTDLNM-SFSEIEELWEGVKDTPKLKWVDLSHSSKLCNLTGLLNAES 673

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC- 152
           L+ L+  GC      P           +N MR  + L   +LP ++ L S+  L L++C 
Sbjct: 674 LQRLNLEGCTSLEELPREMERMKCLVFLN-MRGCTSLR--VLPHMN-LISMKTLILTNCS 729

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
            L    + SD     +L+TL+L  +    LP ++  L  L  L L+DCK L  LP+    
Sbjct: 730 SLQTFRVVSD-----NLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGK 784

Query: 213 VEKVR---VNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSA 269
           ++ ++   ++GC+ L T      +R      I+ + SL+LL  +G +I+ + + L++ S+
Sbjct: 785 LKALQELVLSGCSKLKT----FPIR------IENMKSLQLLLLDGTSITDMPKILQLNSS 834


>gi|255547478|ref|XP_002514796.1| hypothetical protein RCOM_1077370 [Ricinus communis]
 gi|223545847|gb|EEF47350.1| hypothetical protein RCOM_1077370 [Ricinus communis]
          Length = 968

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 154/342 (45%), Gaps = 64/342 (18%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC--FKFENLLETVGQVE 73
           E+  SI  L+ L  L L  C  +  +PS    +KS+  LNL  C   KF  L  T+    
Sbjct: 544 EVSPSIGCLNKLHTLILAYCSRITSVPS----IKSVVLLNLAYCPINKFPQLPLTI---- 595

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
               L++SGT +   PS  F  + L  L+ RGC                       +   
Sbjct: 596 --RVLNLSGTELGEVPSIGFHSRPL-ILNLRGC-----------------------IKLK 629

Query: 134 MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
           +LP S  GL  L  LD + C L    + S+I  + SL+ L L   +  +LP++I  L  L
Sbjct: 630 ILPDSFFGLRDLMSLDCAPC-LNISQLESNISLITSLRFLCLVGTDLESLPSAIQQLSIL 688

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL----VTLLGAL----KLRKSSCTIIDFV 244
           E+L L   +RL+SLP+LPP++ ++ V+ C SL     +L+G      KL    CT ++  
Sbjct: 689 EELNLCFSRRLRSLPKLPPHLHRLDVSHCTSLQLDSTSLIGIQGYWGKLFFCDCTSLNHK 748

Query: 245 DSLKLLGKNGLAISML--------REFLEVVSAPSH------KFSIVVPGSEIPKWFMYQ 290
           +   +L      + +L        +EF    S+ +H      KF +++PG+ IPKW   Q
Sbjct: 749 EIRSILMHAHKRVLLLAHAPGKLYKEF--NTSSKNHSVEWKRKFVVIIPGNIIPKWISDQ 806

Query: 291 NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY 332
           + G S+T+  P      +  +G+A   VF   K +     FY
Sbjct: 807 SSGYSVTIPLPPNW--FHNFLGFAVGIVFEFGKCTYDAMGFY 846


>gi|357452821|ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
 gi|355485735|gb|AES66938.1| Disease-resistance protein [Medicago truncatula]
          Length = 1288

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 103/207 (49%), Gaps = 11/207 (5%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINS-LKSLKTLNLLGCFKFENLLETVG 70
           T++ ++  SI  L+ LV L+L+ C +LV L   I S L SL+ L L GC K E   +  G
Sbjct: 754 TNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTKLEKTPDFTG 813

Query: 71  QVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRR 126
              +LE LD+ G T++     SI  +  L+ LS R C    G P+S +         +R 
Sbjct: 814 -ASNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITSLVTLDLRG 872

Query: 127 SSDLGALMLP---SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
              L  L L    S S + SL  LD+S C L +  +P  IG LH L+ L L  NNF  LP
Sbjct: 873 CLKLTTLPLGQNLSSSHMESLIFLDVSFCNLNK--VPDAIGELHCLERLNLQGNNFDALP 930

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLP 210
            +   L  L  L L  C +L++ P +P
Sbjct: 931 YTFLNLGRLSYLNLAHCHKLRAFPHIP 957


>gi|105922849|gb|ABF81440.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1228

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 121/278 (43%), Gaps = 46/278 (16%)

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +LP+   + SL    L  C   E   P  +GN++ L  L L +     L +SI  L  L 
Sbjct: 724 ILPNNLEMESLKICTLDGCSKLE-KFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLG 782

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
            L +  CK L+S+P              +S+  L    KL  S C+       LK + +N
Sbjct: 783 LLSMNSCKNLESIP--------------SSIGFLKSLKKLDLSGCS------ELKYIPEN 822

Query: 254 GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
              +  L EF + +S P   F I VPG+EIP WF +Q++GSSI+V  PS+       +G+
Sbjct: 823 LGKVESLEEF-DGLSNPRTGFGIAVPGNEIPGWFNHQSKGSSISVQVPSW------SMGF 875

Query: 314 AACRVFHVPKHST---GIRRFYRYPHPAHV-LHCSMDEKFGHRGSDHLWLLYLPRQSYYC 369
            AC  F            +   R  +P+ + + C+  +      SDH+WL YL       
Sbjct: 876 VACVAFSAYGERPLRCDFKANGRENYPSLMCISCNSIQVL----SDHIWLFYLSFDYLKE 931

Query: 370 NVKWHFES-NHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
             +W  ES ++  LSF     +         +KVK CG
Sbjct: 932 LKEWQHESFSNIELSFHSYERR---------VKVKNCG 960



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 5/97 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L  L LD+T I E+  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 755 MNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLSGCS 814

Query: 61  KFENLLETVGQVESLEELD-----ISGTAIRCPPSSI 92
           + + + E +G+VESLEE D      +G  I  P + I
Sbjct: 815 ELKYIPENLGKVESLEEFDGLSNPRTGFGIAVPGNEI 851


>gi|5823585|emb|CAB53784.1| disease resistance protein rps4-RLD [Arabidopsis thaliana]
          Length = 1217

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 33/325 (10%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T +K  P  ++ +  L  L LKGC +L  LP    +L SLKTL L GC  F+        
Sbjct: 694  TTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLISDN 751

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +E+L    + GTAI   P ++  ++ L  L+ + C          +P  +  ++    L 
Sbjct: 752  IETLY---LDGTAISQLPMNMEKLQRLVVLNMKDCKMLEE-----IPGRVGELKA---LQ 800

Query: 132  ALMLPSLSGLGSLTKLDLS--DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINC 188
             L+L     L    ++D+S  +  L +G     +  L S++ L LS+N  ++ LP  I+ 
Sbjct: 801  ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSCTIIDF 243
            L  L+ L L+ C  L S+P+ PPN++ +  +GC+SL T+   L       +  S  I   
Sbjct: 861  LSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTN 920

Query: 244  VDSLKLLGKNGLAISMLREFLEVVSAPSHK----------FSIVVPGSEIPKWFMYQNEG 293
             ++L+   K  +  S  +   +++S    +          FS   PG E+P WF ++  G
Sbjct: 921  CENLEQAAKEEIT-SYAQRKCQLLSYARKRHNGGLVSESLFSTCFPGCEVPSWFCHETVG 979

Query: 294  SSITVTRPSYLCNMNQVVGYAACRV 318
            S + V    +  +  ++ G A C V
Sbjct: 980  SELEVKLLPHWHD-KKLAGIALCAV 1003



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 22/138 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-- 61
           +  L LD T I ++P+++E L  LV L +K CK L  +P  +  LK+L+ L L  C    
Sbjct: 752 IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811

Query: 62  --------FENLL-------ETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRG 105
                   F N+L       E + Q+ S++ L +S  A I C P  I  +  LK L  + 
Sbjct: 812 IFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKY 871

Query: 106 CNGPPSSASCYLPFPINL 123
           C    +S +    FP NL
Sbjct: 872 C----TSLTSVPEFPPNL 885


>gi|356533779|ref|XP_003535437.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 983

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 113/241 (46%), Gaps = 17/241 (7%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L   TL GCKN+  L S    L+SLK ++++GC    +L E     +S++ LD
Sbjct: 668 SVFSLDTLETSTLDGCKNVKSLKSE-KHLRSLKEISVIGC---TSLKEFWVSSDSIKGLD 723

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPS--SASCYLPFPINLMRRSSDLGALM 134
           +S T I    SSI  +  L++L+  G    N P    S  C     I   R + D   L 
Sbjct: 724 LSSTGIEMLDSSIGRLTKLRSLNVEGLRHGNLPNELFSLKCLRELRICNCRLAIDKEKLH 783

Query: 135 LPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +    G  SL  L L DC  L E  +P +I  L  L  L L  +   TLP +I  L  L 
Sbjct: 784 VL-FDGSRSLRVLHLKDCCNLSE--LPENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLN 840

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----LGALKLRKSSCTIIDFVDSLKL 249
            L L++C+ L+SLP+LPPNV +     C SL T+    L    LR     I+   +   L
Sbjct: 841 TLSLKNCRMLESLPKLPPNVLEFIATNCRSLRTVSISTLADFALRTGKGIIVSLQNCSNL 900

Query: 250 L 250
           L
Sbjct: 901 L 901


>gi|302125465|emb|CBI35552.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 15/220 (6%)

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            V++PA I+ L NL+ L +  C++LQ +P+LPP+++ +    C SLV+L    ++     
Sbjct: 1   MVSIPADISRLSNLKVLLVRQCEQLQKIPKLPPSIKLLDACDCTSLVSLPTPSRIISPQN 60

Query: 239 TIID-FVDSLKLLGKN--GLA---ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNE 292
            ++  ++  L+ +  N  GL    ++M  E L     P   +SIV+PGS IPKW  ++N 
Sbjct: 61  WLVSTWLRPLEFMLWNCSGLYQDHVAMALETLHQELFPEIGYSIVIPGSRIPKWRWHENM 120

Query: 293 GSSITVTRPSYLCNMNQVVGYAACRVFHVPKHST-----GIRRFYRYPHPAHVLHCSMDE 347
           G+S++ T P +  + N   G A C VF + +  T      IR  +      +  H     
Sbjct: 121 GASVSATLPPHWLD-NNFSGVALCAVFALEEGETIQRPGEIRCNFECREGPYFSHSITWT 179

Query: 348 KFGHR--GSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSF 384
             G R   +DH+ ++Y PR  +  +   H     H ++SF
Sbjct: 180 HSGDRVVETDHVCMMYQPRTQFVKSKSTHASVFKHIKVSF 219


>gi|317415950|emb|CAR94516.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 807

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 1/88 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNI-NSLKSLKTLNLLGC 59
           M+ LR+L LD T I+E+P SIE LSGL  L L+ CKNL+ LP    +SL SL+ LNL GC
Sbjct: 706 MKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGC 765

Query: 60  FKFENLLETVGQVESLEELDISGTAIRC 87
              + L + +G +E L+ELD SGTAIR 
Sbjct: 766 SNLDKLPDNLGSLECLQELDASGTAIRA 793



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 23/146 (15%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L QL LKGC +L  +P  IN L+SL   NL GC K E + E    ++ L +L + GTAI 
Sbjct: 662 LEQLILKGCTSLSEVPDIIN-LRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDGTAIE 720

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             P+SI  +  L  L  R C    S    +             L +L + +LSG  +L K
Sbjct: 721 ELPTSIEHLSGLTLLDLRDCKNLLSLPDVF----------CDSLTSLQILNLSGCSNLDK 770

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTL 172
           L            P ++G+L  L+ L
Sbjct: 771 L------------PDNLGSLECLQEL 784



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           +P +  L SLT  +LS C   E  IP    ++  L+ L+L       LP SI  L  L  
Sbjct: 676 VPDIINLRSLTNFNLSGCSKLE-KIPEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLTL 734

Query: 195 LKLEDCKRLQSLPQL----PPNVEKVRVNGCASLVTL---LGALK 232
           L L DCK L SLP +      +++ + ++GC++L  L   LG+L+
Sbjct: 735 LDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSNLDKLPDNLGSLE 779


>gi|147811645|emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera]
          Length = 1919

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 62/99 (62%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ME L+E LLD T I+ +P SI+ L GLV L L+ C+NLV LP  +  L SL+TL + GC 
Sbjct: 1644 MENLKERLLDGTYIEGLPSSIDRLKGLVLLNLRKCQNLVSLPKGMCKLTSLETLIVSGCS 1703

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
            +  NL   +  ++ L +L   GTAI  PP SI L+ NL+
Sbjct: 1704 QLNNLPRNLRSLQRLSQLHADGTAITQPPDSIVLLINLQ 1742



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 70/164 (42%), Gaps = 23/164 (14%)

Query: 30   LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
            L LK    ++ LP++I  LKSL+ L L    K EN  E +  +E+L+E  + GT I   P
Sbjct: 1602 LRLKLGAKILSLPTSICRLKSLEYLFLSSXSKLENFPEVMVDMENLKERLLDGTYIEGLP 1661

Query: 90   SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDL 149
            SSI  +K L  L+ R C    S     LP                   +  L SL  L +
Sbjct: 1662 SSIDRLKGLVLLNLRKCQNLVS-----LP-----------------KGMCKLTSLETLIV 1699

Query: 150  SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
            S C      +P ++ +L  L  L+         P SI  L NL+
Sbjct: 1700 SGCS-QLNNLPRNLRSLQRLSQLHADGTAITQPPDSIVLLINLQ 1742


>gi|297791293|ref|XP_002863531.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309366|gb|EFH39790.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1158

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 136/291 (46%), Gaps = 38/291 (13%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA 84
             L +L L+GC +L  L  N+N L SLKTL L  C  F+   E     E+LE L + GTA
Sbjct: 684 QNLQRLNLEGCTSLESL-RNVN-LMSLKTLTLSNCSNFK---EFPLIPENLEALYLDGTA 738

Query: 85  IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG---L 141
           I   P ++  +K L  L+ + C    + ++C             +L AL    LSG   L
Sbjct: 739 ISQLPDNVVNLKRLVLLNMKDCKMLETISTCL-----------GELKALQKLVLSGCLKL 787

Query: 142 GSLTKLDLSDCG--LGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLKLE 198
               +++ S     L +G     +  LHS++ L LS+N+ ++ L   IN L  L +L L+
Sbjct: 788 KEFPEINKSSLKFLLLDGTSIKTMPQLHSVQYLCLSRNDHISYLRVGINQLSQLTRLDLK 847

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS----CTIIDFVD--SLKLLGK 252
            C +L  +P+LPP ++ +  +GC+SL  +   L    S+    CT  +F +  +L+   K
Sbjct: 848 YCTKLTYVPELPPTLQYLDAHGCSSLKNVATPLARIVSTVQNHCT-FNFTNCGNLEQAAK 906

Query: 253 NGLAISMLREFLEVVSAPSHK---------FSIVVPGSEIPKWFMYQNEGS 294
             +     R+   +  A  H          FS   PG E+P WF ++  GS
Sbjct: 907 EEITSYAQRKCQLLPDARKHYNEGLSSEALFSTCFPGCEVPSWFCHEAVGS 957



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  L LD T I ++P ++  L  LV L +K CK L  + + +  LK+L+ L L GC K
Sbjct: 727 ENLEALYLDGTAISQLPDNVVNLKRLVLLNMKDCKMLETISTCLGELKALQKLVLSGCLK 786

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPS 90
            +   E      SL+ L + GT+I+  P 
Sbjct: 787 LKEFPEI--NKSSLKFLLLDGTSIKTMPQ 813


>gi|356558721|ref|XP_003547651.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1054

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 134/296 (45%), Gaps = 39/296 (13%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL L  + +K++ L +  L  L  L L    ++  LP ++++  +L+ + L  C  
Sbjct: 638 ENLVELHLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVKELP-DLSTATNLEIIGLRFCVG 696

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              +  +V  ++ LE+LD+ G        S   M++L+ LS  GC               
Sbjct: 697 LTRVHPSVFSLKKLEKLDLGGCTSLTSLRSNIHMQSLRYLSLHGC--------------- 741

Query: 122 NLMRRSSDLGALMLPSLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                      L L   S +  +L KL+L    + +  +P  IG+   LK L L+     
Sbjct: 742 -----------LELKDFSVISKNLVKLNLELTSIKQ--LPLSIGSQSMLKMLRLAYTYIE 788

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL--GALKLRKSSC 238
           TLP SI  L  L  L L  C  L++LP+LPP++E + V  C SL T++     + RK + 
Sbjct: 789 TLPTSIKHLTRLRHLDLRYCAGLRTLPELPPSLETLDVRECVSLETVMFPSIPQQRKENK 848

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH-------KFSIVVPGSEIPKWF 287
             + F + L+L   + +AI M  +   V  A  H       + + V PGS++P+W 
Sbjct: 849 KKVCFWNCLQLDEYSLMAIEMNAQINMVKFAHQHLSTFRDAQGTYVYPGSDVPQWL 904


>gi|297794745|ref|XP_002865257.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311092|gb|EFH41516.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1838

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 45/290 (15%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + +K +P SI  L  L  L ++ C  L  LP+ IN LKSL  LNL GC +    L +  Q
Sbjct: 1394 SSLKMLPSSIGHLHKLKDLDMEFCTYLEALPTGIN-LKSLYYLNLNGCSQ----LRSFPQ 1448

Query: 72   VES-LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            + + + +L + GTAI   P+ I  + +L  LS  GC                 +++ S  
Sbjct: 1449 ISTNISDLYLDGTAIEEVPTWIENISSLSYLSMNGCKK---------------LKKIS-- 1491

Query: 131  GALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLH-SLKTLYLSKNNFVTLPASINC 188
                 P++S L  L ++D S+C  L E + P+  G +  S+  + +S N+F +LP +   
Sbjct: 1492 -----PNISKLKLLAEVDFSECTALTEDSWPNHPGGIFTSIMRVDMSGNSFKSLPDTWTS 1546

Query: 189  LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
            +   + L   +C+ L SLP+LP ++  +  N C SL  L G+    + +   I+      
Sbjct: 1547 I-QPKDLIFNNCRNLASLPELPASLSMLMANNCGSLENLNGSFDYPQMALQFIN------ 1599

Query: 249  LLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
                     S+  +  E++      ++I +PG E+P  F ++  GS +T+
Sbjct: 1600 -------CFSLNHQARELILQSDCAYAI-LPGGELPAHFTHRAYGSVLTI 1641



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 104/236 (44%), Gaps = 40/236 (16%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF-------ENLL 66
           ++E  LS + L  L+ L LK C  L  LP N+ +L+ LK L+L GC +         NL 
Sbjct: 730 LQESSLSCQDLGKLICLDLKDCFLLRSLP-NMANLELLKVLDLSGCSRLNTIQSFPRNLK 788

Query: 67  E------TVGQV----ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           E       V QV    +SLE L+  G+ +R  P+   L + LK L   GC    S  +  
Sbjct: 789 ELYLVGTAVRQVAQLPQSLELLNAHGSRLRSLPNMANL-ELLKVLDLSGC----SRLATI 843

Query: 117 LPFPINLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
             FP NL     +      +P L        L+  +         S++ NL  LK L LS
Sbjct: 844 QSFPRNLKELYLAGTAVRQVPQLP-----QSLEFMNAHGSRLRSLSNMANLELLKVLDLS 898

Query: 176 K----NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
                +    LP       NL++L +     ++ LPQLP ++E +  +GC SL ++
Sbjct: 899 GCSRLDTIKGLPR------NLKELDIAGTS-VRGLPQLPQSLELLNSHGCVSLTSI 947



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            + +L LD T I+E+P  IE +S L  L++ GCK L ++  NI+ LK L  ++   C    
Sbjct: 1453 ISDLYLDGTAIEEVPTWIENISSLSYLSMNGCKKLKKISPNISKLKLLAEVDFSEC---T 1509

Query: 64   NLLETV------GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS 111
             L E        G   S+  +D+SG + +  P +   ++  K L F  C    S
Sbjct: 1510 ALTEDSWPNHPGGIFTSIMRVDMSGNSFKSLPDTWTSIQP-KDLIFNNCRNLAS 1562


>gi|224170762|ref|XP_002339417.1| predicted protein [Populus trichocarpa]
 gi|222875050|gb|EEF12181.1| predicted protein [Populus trichocarpa]
          Length = 226

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 9/198 (4%)

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
           + +L +LKL D   ++ LP+LPP++  +  + CASL T++  +K+R S   ++DF +  K
Sbjct: 1   MISLRRLKL-DGTPIKELPELPPSLWILTTHDCASLETVISIIKIR-SLWDVLDFTNCFK 58

Query: 249 LLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMN 308
           L  +  L  +M  +       P     +V+PGSEIP+WF  +  GSS+T+  PS   N +
Sbjct: 59  L-DQKPLVAAMHLKIQSGDKIPHGGIKMVLPGSEIPEWFGEKGIGSSLTMQLPS---NCH 114

Query: 309 QVVGYAACRVF--HVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQS 366
           Q+ G A C VF   +P H    +    +P      +    +   H G D + L+ + + +
Sbjct: 115 QLKGIAFCLVFLLPLPSHDMPYKVDDLFPVEFRFDYHVKSKNGEHDGDDEVVLVSMEKCA 174

Query: 367 YYCNVKWHFESNHFRLSF 384
             CN+K   +S+H  L +
Sbjct: 175 LTCNMK-TCDSDHMVLHY 191


>gi|168068751|ref|XP_001786193.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661952|gb|EDQ48993.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 548

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 113/226 (50%), Gaps = 33/226 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D   ++ +P SI+ L+ LV L L  C++L  LP +I +L SL  LNL GC  FE L E++
Sbjct: 29  DCQSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIGNLNSLVKLNLYGCRSFEALQESI 88

Query: 70  GQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           G + SL +L++ G  +++  P SI  + +L       C                      
Sbjct: 89  GNLNSLVDLNLYGCVSLKALPESIGNLNSLVYFDLYTC---------------------- 126

Query: 129 DLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
             G+L  LP S+  L SL KL+L D      A P  IGNL+SL  L L    +   LP S
Sbjct: 127 --GSLKALPESIGNLNSLVKLNLGDFCKSLKAFPESIGNLNSLVKLNLYGCRSLEALPKS 184

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ----LPPNVEKVRVNGCASLVTL 227
           I+ L +L  L L  C+ L++LP+    L P VE +R+ GC SL  L
Sbjct: 185 IDNLNSLVDLDLFRCRSLKALPESIGNLNPFVE-LRLYGCGSLKAL 229



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 30/200 (15%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE-TVGQV 72
           ++ +P SI  L+ LV+L L+ CK+L  LP +I +L SL  LNL GC   E L E ++G +
Sbjct: 346 LEALPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPEKSIGNL 405

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            SL EL++S   +++  P SI  + +L+      C                        G
Sbjct: 406 NSLVELNLSACVSLKALPDSIGNLNSLEDFDLYTC------------------------G 441

Query: 132 AL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINC 188
           +L  LP S+  L SL KL+L DC   E A+P  I NL+SL  L L +  +   LP SI  
Sbjct: 442 SLKALPESIGNLNSLVKLNLGDCQSLE-ALPKSIHNLNSLVDLDLFRCRSLKALPKSIGN 500

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L +L KL L DC+ L++LP+
Sbjct: 501 LNSLVKLNLRDCQSLEALPE 520



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 32/229 (13%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D   ++ +P SI+ L+ LV L L  C +L  LP +I +L SL  LNL GC   + L E++
Sbjct: 246 DCQSLEALPESIDNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLYGCGSLKALPESI 305

Query: 70  GQVESLEELDIS-------------------------GTAIRCPPSSIFLMKNLKTLSFR 104
           G + SL +LD++                           ++   P SI  + +L  L  R
Sbjct: 306 GNLNSLVDLDLNICRSLKALPKSIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVKLDLR 365

Query: 105 GCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
            C      P S  +      +NL    S L AL   S+  L SL +L+LS C +   A+P
Sbjct: 366 VCKSLKALPESIGNLNSLVKLNLYGCRS-LEALPEKSIGNLNSLVELNLSAC-VSLKALP 423

Query: 161 SDIGNLHSLKTLYL-SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             IGNL+SL+   L +  +   LP SI  L +L KL L DC+ L++LP+
Sbjct: 424 DSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPK 472



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 109/221 (49%), Gaps = 32/221 (14%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+  V+L L GC +L  LP +I +L  L  LNL  C   E L E++  + 
Sbjct: 202 LKALPESIGNLNPFVELRLYGCGSLKALPESIGNLNLLVKLNLRDCQSLEALPESIDNLN 261

Query: 74  SLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL +LD+ +  +++  P SI  + +L  L+  GC                        G+
Sbjct: 262 SLVDLDLYTCGSLKALPESIGNLNSLVKLNLYGC------------------------GS 297

Query: 133 L-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
           L  LP S+  L SL  LDL+ C     A+P  IGNL+SL  L L    +   LP SI  L
Sbjct: 298 LKALPESIGNLNSLVDLDLNICR-SLKALPKSIGNLNSLVKLNLGVCQSLEALPESIGNL 356

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
            +L KL L  CK L++LP+   N+    K+ + GC SL  L
Sbjct: 357 NSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEAL 397



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 16/189 (8%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDI-SGTAIRCP 88
           L L  C +L  LP +I +L SL  LNL  C   E L +++  + SL +LD+    +++  
Sbjct: 1   LDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSLVDLDLFRCRSLKAL 60

Query: 89  PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GALMLP----SLSGL 141
           P SI  + +L  L+  GC    +     L   I  +    DL   G + L     S+  L
Sbjct: 61  PESIGNLNSLVKLNLYGCRSFEA-----LQESIGNLNSLVDLNLYGCVSLKALPESIGNL 115

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK--NNFVTLPASINCLFNLEKLKLED 199
            SL   DL  CG    A+P  IGNL+SL  L L     +    P SI  L +L KL L  
Sbjct: 116 NSLVYFDLYTCG-SLKALPESIGNLNSLVKLNLGDFCKSLKAFPESIGNLNSLVKLNLYG 174

Query: 200 CKRLQSLPQ 208
           C+ L++LP+
Sbjct: 175 CRSLEALPK 183



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D   ++ +P SI  L+ LV L L  C++L  LP +I +L SL  LNL  C   E L E++
Sbjct: 463 DCQSLEALPKSIHNLNSLVDLDLFRCRSLKALPKSIGNLNSLVKLNLRDCQSLEALPESI 522

Query: 70  GQVESLEELDI 80
             + SL +LD+
Sbjct: 523 DNLNSLVDLDL 533



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 38/58 (65%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +K +P SI  L+ LV+L L+ C++L  LP +I++L SL  L+L  C   + LLE++G 
Sbjct: 491 LKALPKSIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCRSLKALLESIGN 548



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+ LV+L L  C++L  LP +I++L SL  L+L  C   + L +++G + 
Sbjct: 443 LKALPESIGNLNSLVKLNLGDCQSLEALPKSIHNLNSLVDLDLFRCRSLKALPKSIGNLN 502

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
           SL +L++    ++   P SI  + +L  L    C
Sbjct: 503 SLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTC 536



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
             +K +P SI  L+ L    L  C +L  LP +I +L SL  LNL  C   E L +++  
Sbjct: 417 VSLKALPDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIHN 476

Query: 72  VESLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGC 106
           + SL +LD+    +++  P SI  + +L  L+ R C
Sbjct: 477 LNSLVDLDLFRCRSLKALPKSIGNLNSLVKLNLRDC 512


>gi|297850936|ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339191|gb|EFH69608.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1401

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 50/307 (16%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            +K +P SI  +  L  L L+G  N+ +LP +   L+ L  L +  C K + L E+ G ++
Sbjct: 950  LKALPESIGKMDTLHNLYLEGS-NIEKLPKDFGKLEKLVVLRMNNCEKLKRLPESFGDLK 1008

Query: 74   SLEELDISGTAIRCPPSS------IFLMKNLKTLSFR--GCNGPPSSASC-YLPFPINLM 124
            SL  L +  T +   P S      + +++ LK   FR    N P +S    ++  P    
Sbjct: 1009 SLRHLYMKETLVSELPESFGNLSKLMVLEMLKKPLFRISESNAPGTSEEPRFVEVP---- 1064

Query: 125  RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                        S S L SL +LD     +  G IP D+  L SL  L L  N F +LP+
Sbjct: 1065 -----------NSFSNLTSLEELDACSWRIS-GKIPDDLEKLSSLMKLNLGNNYFHSLPS 1112

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--------VTLLGALKLRKS 236
            S+  L NL++L L DC+ L+ LP LP  +E + +  C SL        +T+L  L L   
Sbjct: 1113 SLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTILEDLNLTNC 1172

Query: 237  SCTI----IDFVDSLKLLGKNG----LAISMLREFLEVVSAPSHKF--------SIVVPG 280
               +    ++ + +LK L   G     ++++ +   +V+   S           ++ +PG
Sbjct: 1173 GKVVDIPGLEHLMALKRLYMTGCNSNYSLAVKKRLSKVIPRTSQNLRASLKMLRNLSLPG 1232

Query: 281  SEIPKWF 287
            + +P WF
Sbjct: 1233 NRVPDWF 1239



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 90/193 (46%), Gaps = 2/193 (1%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P S+  L  L+QL L+ C  L     +++ LK L+ L L GC     L E +G +  L
Sbjct: 716 KVPRSVGNLRKLLQLDLRRCSKLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCL 775

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
           +EL + GTAI   P SIF ++ L+ LS  GC       SC             D     L
Sbjct: 776 KELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLDDTALRNL 835

Query: 136 P-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           P S+  L +L KL L  C      IP  I  L SLK L+++ +    LP     L  L+ 
Sbjct: 836 PISIGDLKNLQKLHLMRCT-SLSKIPDTINKLISLKELFINGSAVEELPLVTGSLLCLKD 894

Query: 195 LKLEDCKRLQSLP 207
           L   DCK L+ +P
Sbjct: 895 LSAGDCKSLKQVP 907



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 25/232 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPS----------------- 43
            M CL+ELLLD T I  +P SI  L  L +L+L GC+++  LPS                 
Sbjct: 772  MPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLDDTA 831

Query: 44   ------NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                  +I  LK+L+ L+L+ C     + +T+ ++ SL+EL I+G+A+   P     +  
Sbjct: 832  LRNLPISIGDLKNLQKLHLMRCTSLSKIPDTINKLISLKELFINGSAVEELPLVTGSLLC 891

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGE 156
            LK LS   C       S        L  + +      LP   G L  + +L+L +C    
Sbjct: 892  LKDLSAGDCKSLKQVPSSIGGLNFLLQLQLNSTPIESLPEEIGDLHFIRQLELRNCK-SL 950

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             A+P  IG + +L  LYL  +N   LP     L  L  L++ +C++L+ LP+
Sbjct: 951  KALPESIGKMDTLHNLYLEGSNIEKLPKDFGKLEKLVVLRMNNCEKLKRLPE 1002


>gi|297742841|emb|CBI35599.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 114/231 (49%), Gaps = 25/231 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L LD + IKE+   I  L  L  L L  CKNL  +PS I  L+SL+   L+ C 
Sbjct: 123 MENLVRLDLDDSGIKELSCLIGHLPRLRSLELSKCKNLRSVPSGILQLESLRMCYLIDC- 181

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLM----KNLKTLSFRGCNGPPSSASCY 116
              NL+  +  +E  + L +  +AI   PSSI L+    +NL+TL        P+S    
Sbjct: 182 --SNLI--MEDMEHSKGLSLRESAITELPSSIRLVLSNCENLETL--------PNSIG-- 227

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
                 L+ R+  +   +  SL  +  L ++D+S C L  GAIP D+  L SLK L +S 
Sbjct: 228 -----QLVVRNCPMLHKLPDSLRSM-QLKEIDVSGCNLMAGAIPDDLWCLFSLKWLNVSG 281

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           NN   +P  I  L  L  L +  C  L+ +P+LP ++  +   GC  L TL
Sbjct: 282 NNIDCIPGGIIRLSRLHTLIMRHCLMLKEIPELPSSLRWIDARGCPLLETL 332



 Score = 45.1 bits (105), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 101/239 (42%), Gaps = 65/239 (27%)

Query: 51  LKTLNLLGCFKFENLLETVG---QVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           L+ LNL GC  F  L  ++G   +++ L ELD   + IR  PSSI  +  L++L    C 
Sbjct: 4   LEKLNLEGCVSFSKLHSSIGTFSEMKFLRELDFRESGIRELPSSIGSLTFLESLWLSKC- 62

Query: 108 GPPSSASCYLPFPINL---MRR-----SSDLGALMLPS---------------------- 137
                 S +  FP N    MRR      SD G   LP+                      
Sbjct: 63  ------SKFEKFPDNFFVNMRRLRILGLSDSGIKELPTSIECLEALEELLLDNCSNFEKF 116

Query: 138 ---LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
                 + +L +LDL D G+ E  +   IG+L  L++L LSK  N  ++P+ I  L +L 
Sbjct: 117 PEIQKNMENLVRLDLDDSGIKE--LSCLIGHLPRLRSLELSKCKNLRSVPSGILQLESLR 174

Query: 194 KLKLEDCKRL---------------QSLPQLPPNVEKVRVNGCASLVTL---LGALKLR 234
              L DC  L                ++ +LP ++  V  N C +L TL   +G L +R
Sbjct: 175 MCYLIDCSNLIMEDMEHSKGLSLRESAITELPSSIRLVLSN-CENLETLPNSIGQLVVR 232


>gi|296083369|emb|CBI23258.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 15/220 (6%)

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
            V++PA I+ L NL+ L +  C++LQ +P+LPP+++ +    C SLV+L    ++     
Sbjct: 1   MVSIPADISRLSNLKVLLVRQCEQLQKIPKLPPSIKLLDACDCTSLVSLPTPSRIISPQN 60

Query: 239 TIID-FVDSLKLLGKN--GLA---ISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNE 292
            ++  ++  ++ +  N  GL    ++M  E L     P   +SIV+PGS IPKW  ++N 
Sbjct: 61  WLVSTWLRPVEFMLWNCSGLYQDHVAMALETLHQELFPEIGYSIVIPGSRIPKWRWHENM 120

Query: 293 GSSITVTRPSYLCNMNQVVGYAACRVFHVPKHST-----GIRRFYRYPHPAHVLHCSMDE 347
           G+S++ T P +  + N   G A C VF + +  T      IR  +      +  H     
Sbjct: 121 GASVSATLPPHWLD-NNFSGVALCAVFALEEGETIQRPGEIRCNFECREGPYFSHSITWT 179

Query: 348 KFGHR--GSDHLWLLYLPRQSYYCNVKWHFES-NHFRLSF 384
             G R   +DH+ ++Y PR  +  +   H     H ++SF
Sbjct: 180 HSGDRVVETDHVCMMYQPRTQFVKSKSTHASVFKHIKVSF 219


>gi|224109502|ref|XP_002333244.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835789|gb|EEE74224.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1060

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 54/255 (21%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           L+L++T IKE+P S+   S L  L L GC  + + P N+                     
Sbjct: 744 LILEQTSIKEVPQSVA--SKLELLDLSGCSKMTKFPENL--------------------- 780

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
                 E +E+LD+SGTAI+  PSSI  + +L +L   GC+   S +   +P        
Sbjct: 781 ------EDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVP-------- 826

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                         + SL  L+LS  G+ E  + S   ++ SL  LYL       LP SI
Sbjct: 827 --------------MKSLQHLNLSKSGIKEIPLIS-FKHMISLTFLYLDGTPIKELPLSI 871

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
             +  L+ L L     +++LP+LPP++ K+  + CASL T+   + +  S    +DF + 
Sbjct: 872 KDMVCLQHLSLTGTP-IKALPELPPSLRKITTHDCASLETVTSIINI-SSLWHGLDFTNC 929

Query: 247 LKLLGKNGLAISMLR 261
            KL  K  +A   L+
Sbjct: 930 FKLDQKPLVAAMHLK 944



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 52/106 (49%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E + +L L  T IKE+P SI+ L+ L  L + GC  L         +KSL+ LNL    
Sbjct: 780 LEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVPMKSLQHLNLSKSG 839

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
             E  L +   + SL  L + GT I+  P SI  M  L+ LS  G 
Sbjct: 840 IKEIPLISFKHMISLTFLYLDGTPIKELPLSIKDMVCLQHLSLTGT 885


>gi|336238977|gb|AEI27415.1| TIR_2 [Helianthus annuus]
          Length = 1055

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/248 (33%), Positives = 113/248 (45%), Gaps = 42/248 (16%)

Query: 3   CLRELLLDKTD-IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           CL  L+L   + ++E+  SI     LV + L  C  L R P  I+ +K L+TL L GC +
Sbjct: 690 CLERLILWGCESLEEIHPSIGYHKRLVFVNLTSCTALKRFPPIIH-MKKLETLILDGCRR 748

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSI-------------------------FLMK 96
            +   +    ++SL  LD+S T I   P SI                          L+K
Sbjct: 749 PQQFPDIQSNMDSLVTLDLSRTGIEIIPPSIGRFCTNLVSFNLSDCPRLKRIEGNFHLLK 808

Query: 97  NLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE 156
           +LK L+  GC G  S                    +L  P       L KL+LS C LG+
Sbjct: 809 SLKDLNLYGCIGLQSF-------------HHDGYVSLKRPQFPRF--LRKLNLSWCKLGD 853

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
           G I SDI  L +L+ L LS NNF  LP+ I+ L  L+ L L  C RL  LP LP ++  +
Sbjct: 854 GDILSDICELLNLQLLDLSGNNFSRLPSRISQLPCLKYLNLTCCARLAELPDLPSSIALL 913

Query: 217 RVNGCASL 224
            V+GC SL
Sbjct: 914 YVDGCDSL 921


>gi|147845221|emb|CAN81612.1| hypothetical protein VITISV_003348 [Vitis vinifera]
          Length = 901

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 69/120 (57%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L +L L    I+E+P SI  L+GLV L LK CKNL  LP++I  LKSL+ L L GC 
Sbjct: 639 MENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSGCS 698

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E+  E +  +++L+EL + GT I   PSSI  +K L  L+ R C     S    L  P
Sbjct: 699 KLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNLCQSLIEILELP 758



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 86/195 (44%), Gaps = 28/195 (14%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
           CK LV  P  IN +K+L+ LN  GC   +      G +E+L +L ++  AI   PSSI  
Sbjct: 603 CKKLVCFPCIIN-MKALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGH 661

Query: 95  MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
           +  L  L  + C    S     LP                  S+  L SL  L LS C  
Sbjct: 662 LTGLVLLDLKWCKNLKS-----LP-----------------TSICKLKSLEYLFLSGCSK 699

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL-QSLP---QLP 210
            E + P  + N+ +LK L L       LP+SI  L  L  L L  CK L QSL    +LP
Sbjct: 700 LE-SFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNLCQSLIEILELP 758

Query: 211 PNVEKVRVNGCASLV 225
           P+V  +  +   +L+
Sbjct: 759 PSVRDIDAHNFTALL 773



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 43/179 (24%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
            P +  + +L  L+ S C  G    P+  GN+ +L  LYL+      LP+SI  L  L  
Sbjct: 609 FPCIINMKALQILNFSGCS-GLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVL 667

Query: 195 LKLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLG 251
           L L+ CK L+SLP       ++E + ++GC+ L          +S   +++ +D+LK L 
Sbjct: 668 LDLKWCKNLKSLPTSICKLKSLEYLFLSGCSKL----------ESFPEMMENMDNLKELL 717

Query: 252 KNGLAISML----------------------REFLEVVSAP-------SHKFSIVVPGS 281
            +G  I +L                      +  +E++  P       +H F+ ++PGS
Sbjct: 718 LDGTPIEVLPSSIERLKVLILLNLRKCKNLCQSLIEILELPPSVRDIDAHNFTALLPGS 776


>gi|297846862|ref|XP_002891312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337154|gb|EFH67571.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1159

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 28/223 (12%)

Query: 4   LRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L + + + ++P SI   S L +  + GC NLV+L S+I +   LK L+   C   
Sbjct: 672 LKELYLYNCSSLVKLPFSIGTFSHLKKFKISGCSNLVKLSSSIGNATDLKELDFSFCSSL 731

Query: 63  ENLLETVGQVESLEELDISGTA--IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             L   +G   +LE LD+ G +  ++ P S    +  L  L F GC     S+   +P  
Sbjct: 732 VELPSYIGNATNLELLDLRGCSNLVQLPSSIGNAIVTLDRLDFSGC-----SSLVAIPSS 786

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
           I    ++ +L  L     SG  SL +L            P+ IGNLH L +L L++ +  
Sbjct: 787 IG---KAINLKYL---EFSGYSSLVEL------------PASIGNLHKLSSLTLNRCSKL 828

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
             LP +IN L +LE L L DC  L+S P++  N+  + ++G A
Sbjct: 829 EVLPININ-LQSLEALILTDCSLLKSFPEISTNISYLDLSGTA 870



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 68/317 (21%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNI-NSLKSLKTLNLLGCFKFENLLETVG 70
            + + E+P  I   + L  L L+GC NLV+LPS+I N++ +L  L+  GC     +  ++G
Sbjct: 729  SSLVELPSYIGNATNLELLDLRGCSNLVQLPSSIGNAIVTLDRLDFSGCSSLVAIPSSIG 788

Query: 71   QVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
            +  +L+ L+ SG +++   P+SI  +  L +L+   C     S    LP  INL      
Sbjct: 789  KAINLKYLEFSGYSSLVELPASIGNLHKLSSLTLNRC-----SKLEVLPININL----QS 839

Query: 130  LGALMLPSLSGLGS-------LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS-KNNFVT 181
            L AL+L   S L S       ++ LDLS   + E  +P  I     L+TL++S   N   
Sbjct: 840  LEALILTDCSLLKSFPEISTNISYLDLSGTAIEE--VPLSISLWSRLETLHMSYSENLKN 897

Query: 182  LPASINCLFNL--------------------EKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
             P +++ + +L                     +L L+ C +L SLPQLP ++ ++    C
Sbjct: 898  FPHALDIITDLHLSDTKIQEVAPWVKRISRLRRLVLKGCNKLLSLPQLPDSLSELDAENC 957

Query: 222  ASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS 281
             SL  L          C+ +D      ++  +   +S                  V+PG 
Sbjct: 958  ESLERL---------DCSFLDPQARNVIIQTSTCEVS------------------VLPGR 990

Query: 282  EIPKWFMYQNEGSSITV 298
            E+P +F Y+  G S+ V
Sbjct: 991  EMPTYFTYRANGDSLRV 1007



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 115/263 (43%), Gaps = 47/263 (17%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + + ++P SI     L  L L  C NLV LPS+I +L ++K  N   C     L  +VG+
Sbjct: 598 SSLVKLPFSIGNAINLEILNLYDCSNLVELPSSIGNLINIKKFNFRRCSSLVELPSSVGK 657

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI---------- 121
              LEEL++                NLK L    C     S+   LPF I          
Sbjct: 658 ATKLEELELGNAT------------NLKELYLYNC-----SSLVKLPFSIGTFSHLKKFK 700

Query: 122 -----NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
                NL++ SS +G            L +LD S C      +PS IGN  +L+ L L  
Sbjct: 701 ISGCSNLVKLSSSIG--------NATDLKELDFSFCS-SLVELPSYIGNATNLELLDLRG 751

Query: 177 -NNFVTLPASI-NCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTLLGAL 231
            +N V LP+SI N +  L++L    C  L ++P       N++ +  +G +SLV L  ++
Sbjct: 752 CSNLVQLPSSIGNAIVTLDRLDFSGCSSLVAIPSSIGKAINLKYLEFSGYSSLVELPASI 811

Query: 232 -KLRKSSCTIIDFVDSLKLLGKN 253
             L K S   ++    L++L  N
Sbjct: 812 GNLHKLSSLTLNRCSKLEVLPIN 834



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 16/119 (13%)

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
           M  SS +   +LP LS   +L +LD S C      +P  IGN  +L+ L L   +N V L
Sbjct: 569 MDLSSSVNLKVLPDLSTATNLKELDCSFCS-SLVKLPFSIGNAINLEILNLYDCSNLVEL 627

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQL--------------PPNVEKVRVNGCASLVTL 227
           P+SI  L N++K     C  L  LP                  N++++ +  C+SLV L
Sbjct: 628 PSSIGNLINIKKFNFRRCSSLVELPSSVGKATKLEELELGNATNLKELYLYNCSSLVKL 686


>gi|15240885|ref|NP_198650.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758866|dbj|BAB09448.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006916|gb|AED94299.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1059

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 129/295 (43%), Gaps = 52/295 (17%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+P SI   + L +L L  C +LV LPS+I SL  L+ L L GC K E +L T   +ESL
Sbjct: 717 EIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHKLRELRLRGCSKLE-VLPTNISLESL 775

Query: 76  EELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
           + LDI+  + ++  P     +K+L +L+    N  PS    +      ++  + +L    
Sbjct: 776 DNLDITDCSLLKSFPDISTNIKHL-SLARTAINEVPSRIKSWSRLRYFVVSYNENLKE-- 832

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
             S   L ++T L  +D  + E                         LP  +  +  LE 
Sbjct: 833 --SPHALDTITMLSSNDTKMQE-------------------------LPRWVKKISRLET 865

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNG 254
           L LE CK L +LP+LP ++  + V  C SL  L       K     I FV+ LKL     
Sbjct: 866 LMLEGCKNLVTLPELPDSLSNIGVINCESLERL--DCSFYKHPNMFIGFVNCLKL----- 918

Query: 255 LAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQ 309
                 +E  E++   S   SI +PG  +P  F Y+  G S+       L N+NQ
Sbjct: 919 -----NKEARELIQTSSSTCSI-LPGRRVPSNFTYRKTGGSV-------LVNLNQ 960


>gi|359493539|ref|XP_002267388.2| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1001

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 27/176 (15%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET-VGQVESLEELDISGTAI 85
           L++L L        LP++I +LKSL+TL+L GC +F   + T +G ++SL+ LD+SG   
Sbjct: 266 LMELDLSFTNLSGELPASIGNLKSLQTLDLSGC-EFSGFIHTSIGNLKSLQTLDLSGCEF 324

Query: 86  RC-PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
               P+SI  +K+L+TL    C                      +    +  S+  L SL
Sbjct: 325 SGFIPTSIGNLKSLQTLDLSDC----------------------EFSGSIPTSIGNLKSL 362

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLFNLEKLKLED 199
             LDLS+C    G+IP+ IGNL SL++LYL  NNF   LP SI  L NL+ L+  +
Sbjct: 363 QTLDLSNCEF-LGSIPTSIGNLKSLRSLYLFSNNFSGQLPPSIGNLTNLQNLRFSN 417



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 90/195 (46%), Gaps = 25/195 (12%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA 84
           S L+ + L GC    R P +   L  L+ L+L              +  SL ELD+S T 
Sbjct: 216 SSLISIDLSGCGLHGRFPDHDIHLPKLEVLDLWRNDDLSGNFPRFSENNSLMELDLSFTN 275

Query: 85  IRCP-PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
           +    P+SI  +K+L+TL   GC                      +    +  S+  L S
Sbjct: 276 LSGELPASIGNLKSLQTLDLSGC----------------------EFSGFIHTSIGNLKS 313

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLFNLEKLKLEDCKR 202
           L  LDLS C    G IP+ IGNL SL+TL LS   F  ++P SI  L +L+ L L +C+ 
Sbjct: 314 LQTLDLSGCEF-SGFIPTSIGNLKSLQTLDLSDCEFSGSIPTSIGNLKSLQTLDLSNCEF 372

Query: 203 LQSLPQLPPNVEKVR 217
           L S+P    N++ +R
Sbjct: 373 LGSIPTSIGNLKSLR 387



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 105/226 (46%), Gaps = 51/226 (22%)

Query: 4   LRELLLDKTDIK-EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL L  T++  E+P SI  L  L  L L GC+    + ++I +LKSL+TL+L GC +F
Sbjct: 266 LMELDLSFTNLSGELPASIGNLKSLQTLDLSGCEFSGFIHTSIGNLKSLQTLDLSGC-EF 324

Query: 63  ENLLET-VGQVESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGC---NGPPSSA---- 113
              + T +G ++SL+ LD+S        P+SI  +K+L+TL    C      P+S     
Sbjct: 325 SGFIPTSIGNLKSLQTLDLSDCEFSGSIPTSIGNLKSLQTLDLSNCEFLGSIPTSIGNLK 384

Query: 114 ---SCYL----------PFPINL-----MRRSSDLGALMLPS-LSGLGSLTKLDLS---- 150
              S YL          P   NL     +R S++L    +PS L  L SL  LDLS    
Sbjct: 385 SLRSLYLFSNNFSGQLPPSIGNLTNLQNLRFSNNLFNGTIPSQLYTLPSLVNLDLSHKKL 444

Query: 151 ---------------DCGLGE--GAIPSDIGNLHSLKTLYLSKNNF 179
                          D  + E  G IPS I  L +L+ LYL  NN 
Sbjct: 445 TGHIGEFQFDSLEYIDLSMNELHGPIPSSIFKLANLEFLYLYSNNL 490



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL-PASINCLFNLEKLKLED 199
           L + T +DLS     +G IP  IGNL+SL+ L LS NN   L P+S   L +LE L L  
Sbjct: 804 LNTFTTVDLSSNKF-QGEIPKSIGNLNSLRGLNLSHNNLTGLIPSSFGNLKSLESLDLSS 862

Query: 200 CKRLQSLPQ 208
            + + S+PQ
Sbjct: 863 NELIGSIPQ 871


>gi|10121908|gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 34/308 (11%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 1091 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 1149

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
            +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 1150 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 1209

Query: 121  INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 1210 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 1268

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--------V 225
            L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL        +
Sbjct: 1269 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL 1328

Query: 226  TLLGALKLRKSSCTI----IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF--SIVVP 279
            T+L  L L   +  +    ++ + +LK L   G   +      + +S  S K   ++ +P
Sbjct: 1329 TILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLP 1388

Query: 280  GSEIPKWF 287
            G+ +P WF
Sbjct: 1389 GNRVPDWF 1396



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2    ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 869  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 928

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 929  DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 982

Query: 121  INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 983  IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 1041

Query: 175  SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            + +    LP   + L +L      DCK L+ +P
Sbjct: 1042 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 1074



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 928  SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 985

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
            ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 986  LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 1040

Query: 131  ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                    LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 1041 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 1099

Query: 186  INCLFNLEKLKLEDCKRLQSLPQ 208
            I  L  + +L+L +CK L+ LP+
Sbjct: 1100 IGALHFIRELELRNCKFLKFLPK 1122



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
            ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 986  LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 1045

Query: 59   ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                 C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 1046 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 1105

Query: 98   LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
            ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 1106 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 1161

Query: 153  GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
             + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 1162 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 1205


>gi|297850938|ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339192|gb|EFH69609.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1541

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 30/228 (13%)

Query: 2    ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            E L  L+ ++ T + ++P S+  L  L+ L    C  L    ++++ LK L+ L L GC 
Sbjct: 853  EALEMLVFEQCTLLVKVPKSVGNLRKLLHLDFSRCSKLSEFLADVSGLKRLEKLFLSGCS 912

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                L E +G + SL+EL + GTAI+  P SI  ++NL+ LS  GC   P    C     
Sbjct: 913  DLSVLPENIGAMTSLKELLLDGTAIKYLPESINRLQNLEILSLSGCRYIPELPLC----- 967

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                             +  L SL KL L+D  L    +PS IG+L  L+ L+L +  + 
Sbjct: 968  -----------------IGTLKSLEKLYLNDTALKN--LPSSIGDLKKLQDLHLVRCTSL 1008

Query: 180  VTLPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASL 224
              +P SIN L +L+KL +     ++ LP  P   P++      GC  L
Sbjct: 1009 SKIPDSINELISLKKLFITGSA-VEELPLKPSSLPSLTDFSAGGCKFL 1055



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 34/306 (11%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            I+ +P  I  L  + +L L  C+ L  LP +I  + +L +LNL G    E L E  G++E
Sbjct: 1078 IEALPKEIGALHFIRKLELMNCEFLKFLPKSIGDMDTLCSLNLEGS-NIEELPEEFGKLE 1136

Query: 74   SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFPIN 122
            +L EL +S  T ++  P S   +K+L  L  +       P S  +         L  P+ 
Sbjct: 1137 NLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETLVSELPESFGNLSKLMVLEMLKNPLF 1196

Query: 123  LMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
             +  S+  G    P       S S L SL +LD     +  G IP D+  L SL  L L 
Sbjct: 1197 RISESNAPGTSEEPRFVEVPNSFSNLTSLEELDARSWRIS-GKIPDDLEKLSSLMKLNLG 1255

Query: 176  KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--------VTL 227
             N F +LP+S+  L NL++L L DC+ L+ LP LP  +E + +  C SL        +T+
Sbjct: 1256 NNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTI 1315

Query: 228  LGALKLRKSSCTI----IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF--SIVVPGS 281
            L  L L      +    ++ + +LK L   G   +      + +S  S K   ++ +PG+
Sbjct: 1316 LEDLNLTNCGKVVDIPGLEHLMALKRLYMTGCNSNYSLAVKKRLSKASLKMLRNLSLPGN 1375

Query: 282  EIPKWF 287
             +P W 
Sbjct: 1376 RVPDWL 1381



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 25/232 (10%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK-----------------------N 37
            M  L+ELLLD T IK +P SI  L  L  L+L GC+                        
Sbjct: 924  MTSLKELLLDGTAIKYLPESINRLQNLEILSLSGCRYIPELPLCIGTLKSLEKLYLNDTA 983

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
            L  LPS+I  LK L+ L+L+ C     + +++ ++ SL++L I+G+A+   P     + +
Sbjct: 984  LKNLPSSIGDLKKLQDLHLVRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPSSLPS 1043

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
            L   S  GC       S        L  + +      LP  +  L  + KL+L +C   +
Sbjct: 1044 LTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELMNCEFLK 1103

Query: 157  GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
              +P  IG++ +L +L L  +N   LP     L NL +L++ +C  L+ LP+
Sbjct: 1104 -FLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRLPE 1154


>gi|302819943|ref|XP_002991640.1| hypothetical protein SELMODRAFT_134000 [Selaginella moellendorffii]
 gi|300140489|gb|EFJ07211.1| hypothetical protein SELMODRAFT_134000 [Selaginella moellendorffii]
          Length = 407

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 111/265 (41%), Gaps = 43/265 (16%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  L  L  L L  CKNL  LP  I  L  LK L+L GC   + L   +G++ 
Sbjct: 133 LAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKELPPQIGKLS 192

Query: 74  SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            LE LD+     +   PS I ++  LK L    C G        LP  +  MR   +LG 
Sbjct: 193 MLERLDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQ-----LPAEVGDMRSLVELGL 247

Query: 133 LMLPSLSG-------LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK--------- 176
               SL G       L SL  L L  C  G  ++P+D+GNL SLK L L+K         
Sbjct: 248 EGCTSLKGLPAQVGQLRSLENLGLDGCT-GLTSLPADVGNLESLKRLSLAKCSALEGLPR 306

Query: 177 ----------------NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVR 217
                            +   +PA +  +  L  L LE C  L S+P      PN+E + 
Sbjct: 307 EVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIPPGIFRLPNLELLD 366

Query: 218 VNGCASLVTLLGALK-LRKSSCTII 241
           +  C  L   +G+   + K  CT++
Sbjct: 367 LRRCTLLAQDVGSSSDMHKYGCTLV 391



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 104/212 (49%), Gaps = 12/212 (5%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL+L   T I E+P S+  L  L  + L  C  L+ LP +I  L +LK ++L GC   
Sbjct: 2   LQELVLSVCTSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESL 61

Query: 63  ENLLETVGQVESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYL 117
            +L   +G++ +L EL ++G  +++  P  I  + +L  L    C      P    +   
Sbjct: 62  TSLPPEIGELRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTG 121

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSK 176
              +N+M     L AL  P +  L  LT L+LSDC  L E  +P  IG L  LK L+L  
Sbjct: 122 LRELNMM-WCEKLAALP-PQVGFLHELTDLELSDCKNLPE--LPVTIGKLSCLKRLHLRG 177

Query: 177 -NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
             +   LP  I  L  LE+L L+ C  L SLP
Sbjct: 178 CAHLKELPPQIGKLSMLERLDLKKCGGLTSLP 209



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T IK++P  +  +  LV+L L+GC +L  LP+ +  L+SL+ L L GC    +L   VG 
Sbjct: 227 TGIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLTSLPADVGN 286

Query: 72  VESLEELDIS 81
           +ESL+ L ++
Sbjct: 287 LESLKRLSLA 296


>gi|345291875|gb|AEN82429.1| AT4G12010-like protein, partial [Capsella rubella]
 gi|345291877|gb|AEN82430.1| AT4G12010-like protein, partial [Capsella rubella]
 gi|345291879|gb|AEN82431.1| AT4G12010-like protein, partial [Capsella rubella]
 gi|345291881|gb|AEN82432.1| AT4G12010-like protein, partial [Capsella rubella]
          Length = 167

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 94/185 (50%), Gaps = 21/185 (11%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           LLLD T IK +P SIE LS L  L LK CK L  L S++  LK L+ L L GC + E   
Sbjct: 4   LLLDGTAIKSLPESIETLSKLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCTQLEVFP 63

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E    +ESLE L +  TAI   P  I  + N+KT S  G N   S +  ++P        
Sbjct: 64  EIKEDMESLEILLLDDTAITEMP-KIMHLSNIKTFSLCGTNSQVSVSMFFMP-------- 114

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                    P+ SG   LT L LS C L +  +P +IG L SL++L LS NN   LP S 
Sbjct: 115 ---------PT-SGCSRLTDLYLSRCSLYK--LPGNIGGLSSLQSLCLSGNNIENLPESF 162

Query: 187 NCLFN 191
           N L N
Sbjct: 163 NQLHN 167


>gi|224116222|ref|XP_002331991.1| predicted protein [Populus trichocarpa]
 gi|222832115|gb|EEE70592.1| predicted protein [Populus trichocarpa]
          Length = 556

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 114/280 (40%), Gaps = 72/280 (25%)

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +LPS   + SL    L  C   E   P  +GN++ L  L L +     L +SI  L  L 
Sbjct: 141 ILPSNLEMESLKVFTLDGCSKLE-KFPDVLGNMNCLMVLCLDETGITKLSSSIRHLIGLG 199

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
            L +++CK L+S+P        +R                                    
Sbjct: 200 LLSMKNCKNLESIPS------SIR------------------------------------ 217

Query: 254 GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
               +ML  +L+ +S P   F I VPG+EIP WF +Q++GSSI+V  PS+       +G+
Sbjct: 218 --CFTMLERYLQCLSNPRPGFGIAVPGNEIPGWFNHQSKGSSISVQVPSW------SMGF 269

Query: 314 AACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSY 367
            AC  F   + S  +   ++      YP P   + C+  +      SDH+WL YL     
Sbjct: 270 VACVGFSANRESPSLFCQFKANGRENYPSPM-CISCNSIQVL----SDHIWLFYLSFDYL 324

Query: 368 YCNVKW-HFESNHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
               +W H   ++  LSF   +          G+KVK CG
Sbjct: 325 KELKEWQHGSFSNIELSFHSFQ---------PGVKVKNCG 355



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 31/52 (59%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLK 52
           M CL  L LD+T I ++  SI  L GL  L++K CKNL  +PS+I     L+
Sbjct: 172 MNCLMVLCLDETGITKLSSSIRHLIGLGLLSMKNCKNLESIPSSIRCFTMLE 223



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            L  + L  C+++  LPSN+  ++SLK   L GC K E   + +G +  L  L +  T I
Sbjct: 127 NLQYVNLVNCESIRILPSNLE-MESLKVFTLDGCSKLEKFPDVLGNMNCLMVLCLDETGI 185

Query: 86  RCPPSSIFLMKNLKTLSFRGCN---GPPSSASCY 116
               SSI  +  L  LS + C      PSS  C+
Sbjct: 186 TKLSSSIRHLIGLGLLSMKNCKNLESIPSSIRCF 219


>gi|168044488|ref|XP_001774713.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674013|gb|EDQ60528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 529

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 126/243 (51%), Gaps = 25/243 (10%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           +  L+EL L   + ++ +P  +E LS L++L L GC +L+ LP+ + +L SL+ L+L  C
Sbjct: 65  LSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSLEELDLSHC 124

Query: 60  FKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
               NL   +  + SL  L +SG +++   P+ +  + +L+ L    C+   S     LP
Sbjct: 125 SSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNCSSLTS-----LP 179

Query: 119 FPINLMRRSSDLGALMLP----------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
              N +R  S L  L L            L+ L SLT+LDLS C     ++P+++ NL S
Sbjct: 180 ---NKLRNLSSLEELDLSHCSSLTNLPNELANLSSLTRLDLSGCS-SLTSLPNELTNLSS 235

Query: 169 LKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASL 224
           L  L LS  ++  +LP  +  L +L +L L  C  L SLP    N+    ++ ++GC+SL
Sbjct: 236 LTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSL 295

Query: 225 VTL 227
            +L
Sbjct: 296 TSL 298



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 25/247 (10%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +  +P  I  LS L +L L GC +L  LP+ + +L +L+ L+L  C    +L   +  
Sbjct: 5   TSLISLPNEIANLSSLEELYLNGCSSLKSLPNELANLSNLRRLDLRYCSSLTSLPNELAN 64

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL+ELD+S  +++R  P+ +  + +L  L   GC       S  +  P N +R  S L
Sbjct: 65  LSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGC-------SSLISLP-NELRNLSSL 116

Query: 131 GALMLP----------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
             L L            L+ L SLT+L LS C     ++P+++ NL SL+ L L+  ++ 
Sbjct: 117 EELDLSHCSSLINLPNELANLSSLTRLVLSGCS-SLTSLPNELENLSSLEELRLNNCSSL 175

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTLLGALKLRKS 236
            +LP  +  L +LE+L L  C  L +LP    N+    ++ ++GC+SL +L   L    S
Sbjct: 176 TSLPNKLRNLSSLEELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELT-NLS 234

Query: 237 SCTIIDF 243
           S T +D 
Sbjct: 235 SLTRLDL 241



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 30/204 (14%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDIS-GTAIRCPPSSIF 93
           C +L+ LP+ I +L SL+ L L GC   ++L   +  + +L  LD+   +++   P+ + 
Sbjct: 4   CTSLISLPNEIANLSSLEELYLNGCSSLKSLPNELANLSNLRRLDLRYCSSLTSLPNELA 63

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDC 152
            + +LK L    C+                +RR        LP+ L  L SL +LDLS C
Sbjct: 64  NLSSLKELDLSSCSS---------------LRR--------LPNELENLSSLIRLDLSGC 100

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
                ++P+++ NL SL+ L LS  ++ + LP  +  L +L +L L  C  L SLP    
Sbjct: 101 S-SLISLPNELRNLSSLEELDLSHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPNELE 159

Query: 212 N---VEKVRVNGCASLVTLLGALK 232
           N   +E++R+N C+SL +L   L+
Sbjct: 160 NLSSLEELRLNNCSSLTSLPNKLR 183



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 7/211 (3%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +E LS L +L L  C +L  LP+ + +L SL  L+L GC    +L   +  
Sbjct: 293 SSLTSLPNELENLSFLEELGLNHCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTN 352

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRS 127
           + SL  LD+SG +++   P+ +  + +L TL  RGC+     P+ +       I      
Sbjct: 353 LSSLTRLDLSGCSSLTSLPNELANISSLTTLYLRGCSSLRSLPNESVHISSLTILYFHGY 412

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS-KNNFVTLPASI 186
             L +L L  L  L SL  LDL+ C     ++P+++ N  SL  L LS + +  +LP   
Sbjct: 413 VSLTSL-LNELVNLSSLMTLDLNGCS-SLKSLPNELTNFTSLTILDLSGRLSLTSLPNEF 470

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             L +L++L L  C  L SLP    N+  ++
Sbjct: 471 TNLSSLKELVLSHCSSLTSLPNELTNLSSLK 501



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 51/234 (21%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  LS L +L L GC +L  LP+ + +L SL  L+L GC    +L   +  
Sbjct: 245 SSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELEN 304

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           +  LEEL ++  +++   P+ +  + +L  L   GC+   S                   
Sbjct: 305 LSFLEELGLNHCSSLTSLPNELTNLSSLTRLDLSGCSSLTS------------------- 345

Query: 131 GALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK------------- 176
               LP+ L+ L SLT+LDLS C     ++P+++ N+ SL TLYL               
Sbjct: 346 ----LPNELTNLSSLTRLDLSGCS-SLTSLPNELANISSLTTLYLRGCSSLRSLPNESVH 400

Query: 177 ---------NNFVTLPASINCLFNLEK---LKLEDCKRLQSLPQLPPNVEKVRV 218
                    + +V+L + +N L NL     L L  C  L+SLP    N   + +
Sbjct: 401 ISSLTILYFHGYVSLTSLLNELVNLSSLMTLDLNGCSSLKSLPNELTNFTSLTI 454


>gi|344171427|emb|CCA83919.1| leucine-rich repeat protein type III effector protein [blood
           disease bacterium R229]
          Length = 741

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 31/234 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR++ L+  D+  +P     L+ L +L+L    NL RLP ++N+L+ L+ L+L      E
Sbjct: 107 LRQMHLEDCDLHVLPEHFGNLNQLQELSLLYHLNLRRLPDSLNNLRELQKLDLRDTGITE 166

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
             L  + ++  L+ L +  T +   PS I  ++NLK L                    N+
Sbjct: 167 --LPQINRLSQLKTLSVDSTPLTAMPSDIAALRNLKRLMVTRT---------------NI 209

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN-FVTL 182
               S +G LM         L  L LS     + A+P+ IGNL  L+ L L+ N     +
Sbjct: 210 REVPSTIGNLM--------HLKTLTLSRNHHLQ-AVPASIGNLSGLEELSLNGNRGLRAV 260

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ----LPPNVEKVRVNGCASLVTLLGALK 232
           P SI  L +L+KL L DC +L++LP+    L P++ ++ +NGC SL +L   L+
Sbjct: 261 PDSIGNLRHLKKLYLHDCPQLRTLPESIANLMPHLTRLDLNGCTSLQSLPACLR 314



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 50/201 (24%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           L++    I+ +P ++  L+ L Q+ L+ C +L  LP +  +L  L+ L+LL       L 
Sbjct: 87  LVIRNAPIQYLPDAVSQLTHLRQMHLEDC-DLHVLPEHFGNLNQLQELSLLYHLNLRRLP 145

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           +++  +  L++LD+                                              
Sbjct: 146 DSLNNLRELQKLDLR--------------------------------------------- 160

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
             D G   LP ++ L  L  L +    L   A+PSDI  L +LK L +++ N   +P++I
Sbjct: 161 --DTGITELPQINRLSQLKTLSVDSTPLT--AMPSDIAALRNLKRLMVTRTNIREVPSTI 216

Query: 187 NCLFNLEKLKLEDCKRLQSLP 207
             L +L+ L L     LQ++P
Sbjct: 217 GNLMHLKTLTLSRNHHLQAVP 237


>gi|351722733|ref|NP_001237766.1| functional candidate resistance protein KR1 [Glycine max]
 gi|18033111|gb|AAL56987.1|AF327903_1 functional candidate resistance protein KR1 [Glycine max]
          Length = 1124

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 122/290 (42%), Gaps = 54/290 (18%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L  L  +GC  L   P     L SL+ L L  C   EN  E +G++E++ ELD
Sbjct: 676 SVGFLEKLRILDAEGCSRLKNFPPI--KLTSLEQLKLGFCHSLENFPEILGKMENITELD 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTL-------SFRGCNGPPSSASCYL---PFPINL------ 123
           +  T ++  P S   +  L+T+          GC G   S  C +   P  IN+      
Sbjct: 734 LEQTPVKKFPLSFQNLTRLETVLLCFPRNQANGCTGIFLSNICPMQESPELINVIGVGWE 793

Query: 124 --MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
             + R  D GA  + SL+   ++  LDL +C L +   P  +    ++  L LS NNF  
Sbjct: 794 GCLFRKEDEGAENV-SLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTV 852

Query: 182 LPASIN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           +P  I  C F L  L L  C+RL+ +  +PPN++      C SL           SSC  
Sbjct: 853 IPECIKECRF-LTTLYLNYCERLREIRGIPPNLKYFYAEECLSLT----------SSCRS 901

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
           +     L   G         R F              +PG++IP+WF +Q
Sbjct: 902 MLLSQELHEAG---------RTFF------------YLPGAKIPEWFDFQ 930


>gi|255569040|ref|XP_002525489.1| hypothetical protein RCOM_0740580 [Ricinus communis]
 gi|223535168|gb|EEF36847.1| hypothetical protein RCOM_0740580 [Ricinus communis]
          Length = 159

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 59/86 (68%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L +L LD TDI+++PLSIE L+ L  L L  CK+L+ LPS+   L SLKTL + GC 
Sbjct: 40  MERLAKLYLDGTDIEQLPLSIERLTDLDLLNLNNCKSLISLPSSFCDLNSLKTLTVSGCL 99

Query: 61  KFENLLETVGQVESLEELDISGTAIR 86
           K   L E +G VE LEELD+SGT IR
Sbjct: 100 KLGKLPEQLGNVECLEELDMSGTTIR 125



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 27/177 (15%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           +K  + L + PSNI  ++SL+ LN  GC K +   E  G +E L +L + GT I   P S
Sbjct: 1   MKNYRCLSKFPSNIE-MQSLQVLNFSGCCKLKKFPEVKGNMERLAKLYLDGTDIEQLPLS 59

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           I  + +L  L+   C    S  S                      S   L SL  L +S 
Sbjct: 60  IERLTDLDLLNLNNCKSLISLPS----------------------SFCDLNSLKTLTVSG 97

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           C L  G +P  +GN+  L+ L +S      +   +     +++  L  CK LQ + +
Sbjct: 98  C-LKLGKLPEQLGNVECLEELDMSGTTIRMMAQDLTV---IDQQILYSCKPLQMIKE 150


>gi|297815270|ref|XP_002875518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321356|gb|EFH51777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1080

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 144/338 (42%), Gaps = 80/338 (23%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L+D T + E+P SI     L  L L  CK++V LPS   +  +L  LNL GC   
Sbjct: 678 LQELFLIDCTSLVELPSSIGNAISLQTLHLGECKSIVELPSCFGNAINLSWLNLSGCSSL 737

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L  ++G   +LE L +   T +   PSSI  +  L+  + +GC               
Sbjct: 738 VELPSSIGNATNLEILHMDMCTDVVKLPSSIGNLYKLREFTLKGC--------------- 782

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDC-------------------GLGEGAIPSD 162
                   L   +LP+   L SL +L+L+DC                   G     +PS 
Sbjct: 783 --------LKLEILPTNINLESLDELNLTDCLLLKRFPEISTNIKHLYLNGTAVEEVPSS 834

Query: 163 I------GNLH-----SLK----------TLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           I       +LH     SLK          TLY++      +P  +  +  L  LKL  CK
Sbjct: 835 IKSWSRLDDLHMSYSESLKKFPHALDIITTLYVNDLEMHEIPLWVTKISCLRGLKLNGCK 894

Query: 202 RLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLR 261
           +L SLPQLP ++  +    C SL  L  +    K     ++FV+  KL           +
Sbjct: 895 KLVSLPQLPDSLSYLEAVNCESLERLDFSFYNPK---IYLNFVNCFKL----------NK 941

Query: 262 EFLEVVSAPSHKFSIVVPGSEIPKWFMYQ-NEGSSITV 298
           E  E++   S  ++ V+PG E+P  F Y+ N G+S+ V
Sbjct: 942 EARELIIQTSTDYA-VLPGGEVPAKFTYRANRGNSMIV 978


>gi|28558777|gb|AAO45748.1| MRGH5 [Cucumis melo subsp. melo]
          Length = 1092

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 119/261 (45%), Gaps = 46/261 (17%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+ L L++ T ++ +  SI  LS LV L L+ C NL +LPS +  LKSL+ L L GC K 
Sbjct: 794  LKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNLEKLPSYLK-LKSLQNLTLSGCCKL 852

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            E   E    ++SL  L +  TAIR  P SI  + +L     +GC    S     LP   +
Sbjct: 853  ETFPEIDENMKSLYILRLDSTAIRELPPSIGYLTHLYMFDLKGCTNLIS-----LPCTTH 907

Query: 123  LMRRSSDL-------------------------GALMLPSLSG-------------LGSL 144
            L++   +L                           +M  SL+                  
Sbjct: 908  LLKSLGELHLSGSSRFEMFSYIWDPTINPVCSSSKIMETSLTSEFFHSRVPKESLCFKHF 967

Query: 145  TKLDLSDCGLGEGAIPSDIGNL-HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
            T LDL  C +        + N+  SL ++ LS+NNF +LP+ ++   +L  L+L +CK L
Sbjct: 968  TLLDLEGCNISNVDFLEILCNVASSLSSILLSENNFSSLPSCLHKFMSLRNLELRNCKFL 1027

Query: 204  QSLPQLPPNVEKVRVNGCASL 224
            Q +P LP  +++V   GC SL
Sbjct: 1028 QEIPNLPLCIQRVDATGCVSL 1048



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 10/208 (4%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAI 85
            L +L L  C NL  +P +  SL+ L TL+L  C   + +  +    E+LE+LD+S    
Sbjct: 652 NLEELYLSNCSNLKTIPKSFLSLRKLVTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKK 711

Query: 86  RCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG 142
                 I    NL++LSF  C        S           ++  S+L    LP      
Sbjct: 712 LEKIPDISSASNLRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKK--LPRYISWN 769

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCK 201
            L  L+LS C   E  IP D  +  +LK L L +  +   +  SI  L  L  L LE C 
Sbjct: 770 FLQDLNLSWCKKLE-EIP-DFSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCS 827

Query: 202 RLQSLPQL--PPNVEKVRVNGCASLVTL 227
            L+ LP      +++ + ++GC  L T 
Sbjct: 828 NLEKLPSYLKLKSLQNLTLSGCCKLETF 855


>gi|13517474|gb|AAK28809.1|AF310962_1 resistance-like protein P3-B [Linum usitatissimum]
          Length = 1188

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 157/353 (44%), Gaps = 93/353 (26%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINS--LK--SLKTLNLLGCFKFENLLETVGQ 71
            E+P  ++ L+ LV L +  C+NL  LP  ++S  LK   +K L +  C + ++       
Sbjct: 715  EVPFHVQYLTKLVTLDISYCENLKPLPPKLDSKLLKHVRMKYLEITLCPEIDS------- 767

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASC------------- 115
               LEE D+SGT++   PS+I+ +K    L   G N    PP + +              
Sbjct: 768  -RELEEFDLSGTSLGELPSAIYNVKQNGVLYLHGKNITKFPPITTTLKRFTLNGTSIREI 826

Query: 116  ----------------------YLPFPINLM---RRSSDLGALM--LPSLSG-LGSLTKL 147
                                   LP  I  M   R    L  L+  LP +S  + +LT L
Sbjct: 827  DHLADYHQQHQNLWLTDNRQLEVLPNSIWNMVSGRLIIGLSPLIESLPEISEPMNTLTSL 886

Query: 148  DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ--- 204
             +  C     +IP+ I NL SL +L LSK    +LP+SI  L  L  ++L  C+ L+   
Sbjct: 887  RVC-CCRSLTSIPTSISNLRSLGSLCLSKTGIKSLPSSIQELRQLHMIELRYCESLESIP 945

Query: 205  ---------------------SLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
                                 SLP+LPPN++++ V+GC SL        L  ++C ++ +
Sbjct: 946  NSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSGCKSLQA------LPSNTCKLL-Y 998

Query: 244  VDSLKLLGKNGLAISMLREFLE--VVSA---PSHKFSIVVPGSEIPKWFMYQN 291
            ++++   G   L  ++  EF+   +V A   PS++  +   GSE+P+WF Y++
Sbjct: 999  LNTIHFEGCPQLDQAIPAEFVANFLVHASLSPSYERQVRCSGSELPEWFSYRS 1051



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L  L L KT IK +P SI+ L  L  + L+ C++L  +P++I+ L  L T ++ GC 
Sbjct: 904  LRSLGSLCLSKTGIKSLPSSIQELRQLHMIELRYCESLESIPNSIHKLSKLVTFSMSGC- 962

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
              E ++       +L+ELD+SG  +++  PS+   +  L T+ F GC
Sbjct: 963  --EIIISLPELPPNLKELDVSGCKSLQALPSNTCKLLYLNTIHFEGC 1007


>gi|238478649|ref|NP_001154372.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192669|gb|AEE30790.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 34/308 (11%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 915  TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 973

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
            +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 974  LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 1033

Query: 121  INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 1034 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 1092

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--------V 225
            L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL        +
Sbjct: 1093 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL 1152

Query: 226  TLLGALKLRKSSCTI----IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF--SIVVP 279
            T+L  L L   +  +    ++ + +LK L   G   +      + +S  S K   ++ +P
Sbjct: 1153 TILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLP 1212

Query: 280  GSEIPKWF 287
            G+ +P WF
Sbjct: 1213 GNRVPDWF 1220



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 693 EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 752

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 753 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 806

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 807 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 865

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 866 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 898



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 752 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 809

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 810 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 864

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 865 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 923

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 924 IGALHFIRELELRNCKFLKFLPK 946



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
            ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 810  LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 869

Query: 59   ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                 C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 870  VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 929

Query: 98   LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
            ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 930  IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 985

Query: 153  GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
             + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 986  KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 1029


>gi|227438159|gb|ACP30569.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1173

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 140/297 (47%), Gaps = 40/297 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L +L +  + +K++   I+ L  L  + L+  KNL ++P ++++  +L  L L GC   E
Sbjct: 637 LVKLCMQGSKLKKLWDGIQPLRNLKWMDLRSSKNLKKIP-DLSTATNLTYLCLRGCSSLE 695

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           NL  ++G   +L  LD+S  T +   PSSI+   NL+T   + C     S+   LP  I 
Sbjct: 696 NLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDC-----SSLVELPLSIG 750

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
                    A+ L SL+ LG  + L           +PS IGN  +L+ LYL   ++ V 
Sbjct: 751 --------NAINLKSLN-LGGCSSLK---------DLPSSIGNAPNLQNLYLDYCSSLVN 792

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLLGAL-KLRKSS 237
           LP+SI    NL+ L L+ C  L  LP    N   +R   ++GC+SLV L  ++ KL K  
Sbjct: 793 LPSSIENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLHKLP 852

Query: 238 CTIIDFVDSLKLLGKNGLAISM----------LREFLEVVSAPSHKFSIVVPGSEIP 284
              +     LK+L  N   +S+          L++F E+ +   H   I     E+P
Sbjct: 853 KLTMVGCSKLKVLPININMVSLRELDLTGCSSLKKFPEISTNIKHLHLIGTSIEEVP 909



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 54/317 (17%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + +K++P SI     L  L L  C +LV LPS+I +  +L+ L+L  C     L   +G 
Sbjct: 764  SSLKDLPSSIGNAPNLQNLYLDYCSSLVNLPSSIENAINLQVLDLKYCSSLVELPIFIGN 823

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
              +L  LD+SG +++   PSS+  +  L  L+  GC     S    LP  IN++      
Sbjct: 824  ATNLRYLDLSGCSSLVELPSSVGKLHKLPKLTMVGC-----SKLKVLPININMV------ 872

Query: 131  GALMLPSLSGLGSLTKL--------DLSDCGLGEGAIPSDIGNLHSLK------------ 170
             +L    L+G  SL K          L   G     +PS I +   L+            
Sbjct: 873  -SLRELDLTGCSSLKKFPEISTNIKHLHLIGTSIEEVPSSIKSXXHLEHLRMSYSQNLKK 931

Query: 171  ---------TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
                      L+++    + + + +  L +L +L L  CK L SLPQLP ++  +  + C
Sbjct: 932  SPHAXXTITELHITDTEXLDIGSWVKELSHLGRLVLYGCKNLVSLPQLPGSLLDLDASNC 991

Query: 222  ASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGS 281
             SL  L  +L    S  T   F++  KL           +E + ++S    +   V+PG 
Sbjct: 992  ESLERLDSSLHNLNS--TTFRFINCFKL----------NQEAIHLISQTPCRLVAVLPGG 1039

Query: 282  EIPKWFMYQNEGSSITV 298
            E+P  F Y+  G+ +TV
Sbjct: 1040 EVPACFTYRAFGNFVTV 1056


>gi|296089536|emb|CBI39355.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 114/256 (44%), Gaps = 48/256 (18%)

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL----------LGALKLRKSSC 238
           L  +  L LE CK L+SLP+LP ++E +  + C SL TL          LG L+   ++C
Sbjct: 66  LLCIGSLTLEHCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGDLRFNFTNC 125

Query: 239 TII------DFVDSLKLLGKNGLAISMLREFLEVVSAP--SHKFSIVVPGSEIPKWFMYQ 290
             +      D V+++  L    LA SM +  LE        H +  +VPGS IPKWF +Q
Sbjct: 126 FRLGENQGSDIVETI--LEGTQLASSMAK-LLEPDERGLLQHGYQALVPGSRIPKWFTHQ 182

Query: 291 NEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFG 350
           + GS + V  P +  N  + +G AAC VF+      G    YR   P   L C ++ ++ 
Sbjct: 183 SVGSKVIVELPPHWYN-TKWMGLAACVVFNFKGAVDG----YRGTFP---LACFLNGRYA 234

Query: 351 ----HRG--------SDHLWLLYLPRQSYYCNV-KWHFE-SNHFRLSFMDEREKHCPAGS 396
               H          SDH W  Y+ R         W  E S++   SF+       P G+
Sbjct: 235 TLSDHNSLWTSSIIESDHTWFAYISRAELEARYPPWTGELSDYMLASFL----FLVPEGA 290

Query: 397 GTGL-KVKRCGFHPGY 411
            T   +VK+CG    Y
Sbjct: 291 VTSHGEVKKCGVRLVY 306


>gi|297805242|ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316341|gb|EFH46764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 11/232 (4%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L  L+L+  + + E+P SI  LS L  L L GC +L+ LPS   ++  L  L+L GC   
Sbjct: 571 LETLILENCSSLMELPSSIGKLSNLDYLCLGGCSSLLELPSFTKNVTGLVDLDLRGCSSL 630

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             +  ++G   +L  LD+S  +++   PS +    NL+ +  +GC+      S  +   I
Sbjct: 631 VEIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLRNVYLKGCSNLVELPSSIVDL-I 689

Query: 122 NLMRRS-SDLGALM-LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NN 178
           NL +   S   +L+ LP +    +L  LDLSDC      +PS +GN   L+ L L+  +N
Sbjct: 690 NLEKLDLSGCSSLVELPCIRNAVNLQMLDLSDCS-SLVKLPSFVGNATKLEKLNLTNCSN 748

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
            + LP SI+   NL++L LE+C RL  LP       N++ + +  C+++V +
Sbjct: 749 LLELP-SIDNATNLQELLLENCSRLMKLPSTLRNAINLQLINLKNCSNVVKI 799



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +++ E+P SI  L  L +L L GC +LV LP   N++ +L+ L+L  C     L   VG 
Sbjct: 676 SNLVELPSSIVDLINLEKLDLSGCSSLVELPCIRNAV-NLQMLDLSDCSSLVKLPSFVGN 734

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSS 128
              LE+L+++  +      SI    NL+ L    C+     PS+    +   +  ++  S
Sbjct: 735 ATKLEKLNLTNCSNLLELPSIDNATNLQELLLENCSRLMKLPSTLRNAINLQLINLKNCS 794

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
           ++  + +P++  + +L  LDLS C      IP  IG + SL  LYL++ ++ V LP+SI 
Sbjct: 795 NV--VKIPAIENVTNLNLLDLSGCS-SLVEIPPSIGTVTSLHKLYLNRCSSLVELPSSIG 851

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            + +L++L L+DC  L +LP    N+ K++
Sbjct: 852 NITSLQELNLQDCSNLLALPFSIGNLHKLQ 881



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 29/233 (12%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D + + ++P  +   + L +L L  C NL+ LPS I++  +L+ L L  C +   L  
Sbjct: 719 LSDCSSLVKLPSFVGNATKLEKLNLTNCSNLLELPS-IDNATNLQELLLENCSRLMKLPS 777

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINL 123
           T+    +L+ +++   +      +I  + NL  L   GC+     PPS  +      + L
Sbjct: 778 TLRNAINLQLINLKNCSNVVKIPAIENVTNLNLLDLSGCSSLVEIPPSIGTVTSLHKLYL 837

Query: 124 MRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-- 180
            R SS    + LPS +  + SL +L+L DC     A+P  IGNLH L+ L+LS   FV  
Sbjct: 838 NRCSS---LVELPSSIGNITSLQELNLQDCS-NLLALPFSIGNLHKLQELHLSFFFFVKQ 893

Query: 181 ----------TLPASINCLFNLEKLKLED---CKRLQSLPQLPPNVEKVRVNG 220
                      LP +I    NLE LK+ D   C RL+  P++  N+  + + G
Sbjct: 894 LHLSRCSKLEVLPINI----NLESLKVLDLIFCTRLKIFPEISTNIVYLNLVG 942



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 132/314 (42%), Gaps = 63/314 (20%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + + E+P SI  ++ L +L L  C +LV LPS+I ++ SL+ LNL  C     L  ++G 
Sbjct: 817  SSLVEIPPSIGTVTSLHKLYLNRCSSLVELPSSIGNITSLQELNLQDCSNLLALPFSIGN 876

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +  L+EL +S           F +K L            S  S     PIN+   S  + 
Sbjct: 877  LHKLQELHLS---------FFFFVKQLHL----------SRCSKLEVLPININLESLKVL 917

Query: 132  ALML-------PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK----NNFV 180
             L+        P +S   ++  L+L    + E  +P  I +   L    +S     N F 
Sbjct: 918  DLIFCTRLKIFPEIST--NIVYLNLVGTTIEE--VPLSIRSWPRLDIFCMSYFENLNEFP 973

Query: 181  TLPASINCLF----------------NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
                 I CL                  L+++ L  CKRL SLPQLP  +  +    CASL
Sbjct: 974  HALDIITCLHLSGDIQEVATWVKGISRLDQILLYGCKRLVSLPQLPDILSDLDTENCASL 1033

Query: 225  VTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIP 284
              L  +     +S   ++F +  KL   N  A  +      ++   + K++I +PG E+ 
Sbjct: 1034 EKLDCSF---HNSEIRLNFANCFKL---NKEARDL------IIQTSTSKYAI-LPGREVS 1080

Query: 285  KWFMYQNEGSSITV 298
              F Y+  G S+TV
Sbjct: 1081 SSFTYRAAGDSVTV 1094


>gi|297790458|ref|XP_002863119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308943|gb|EFH39378.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1121

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 144/335 (42%), Gaps = 66/335 (19%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + +  +P SI   + L  L L GC +LV LPS+I +L +LK L+L        L  ++G 
Sbjct: 712  SSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLSCLVELPFSIGN 771

Query: 72   VESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            + +L+ L++S  +     P SI    NL+ L+ R C     S    LPF I  +++   L
Sbjct: 772  LINLKVLNLSSLSCLVELPFSIGNATNLEVLNLRQC-----SNLVKLPFSIGNLQKLQTL 826

Query: 131  GAL------MLPSLSGLGSLTKLDLSDC-------------------GLGEGAIPSDIG- 164
                     +LP+   LGSL  LDL+DC                   G     +PS I  
Sbjct: 827  NLRGCSKLEVLPANIKLGSLWSLDLTDCILLKRFPEISTNVGFIWLIGTTIEEVPSSIKS 886

Query: 165  -------------NLHS-------LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
                         NL +       +  L ++      +P  +N    L  LKL+ CK+L 
Sbjct: 887  WSRPNEVHMSYSENLKNFPHAFDIITRLQVTNTEIQEVPPWVNKFSRLTVLKLKGCKKLV 946

Query: 205  SLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
            SLPQ+P ++  +    C SL  L  +     +    + F    KL   N  A  +     
Sbjct: 947  SLPQIPDSISDIDAEDCESLERLDCSF---HNPNIWLKFAKCFKL---NQEARDL----- 995

Query: 265  EVVSAPSHKFSIVVPGSEIPKWFMYQN-EGSSITV 298
             ++  P+ K S V+PG E+P +F +Q+  G S+T+
Sbjct: 996  -IIQTPTSK-SAVLPGREVPAYFTHQSTTGGSLTI 1028



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 97/202 (48%), Gaps = 15/202 (7%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSA 113
           + C K E L E +  + +L+ +D+S + +      +    NL+TL+ R C+     PSS 
Sbjct: 662 MRCSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTATNLRTLNLRYCSSLMNLPSSI 721

Query: 114 SCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCG-LGEGAIPSDIGNLHSLKT 171
                  +  +   S L  + LP S+  L +L +LDLS    L E  +P  IGNL +LK 
Sbjct: 722 GNATNLELLYLGGCSSL--VELPSSIGNLINLKELDLSSLSCLVE--LPFSIGNLINLKV 777

Query: 172 LYLSKNN-FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
           L LS  +  V LP SI    NLE L L  C  L  LP    N++K++   + GC+ L  L
Sbjct: 778 LNLSSLSCLVELPFSIGNATNLEVLNLRQCSNLVKLPFSIGNLQKLQTLNLRGCSKLEVL 837

Query: 228 LGALKLRKSSCTIIDFVDSLKL 249
              +KL   S   +D  D + L
Sbjct: 838 PANIKL--GSLWSLDLTDCILL 857


>gi|297791255|ref|XP_002863512.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309347|gb|EFH39771.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 991

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 191/471 (40%), Gaps = 88/471 (18%)

Query: 20  SIELLSG--------LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           S+E LSG        L+ L L+GC  LV LP    SL SLK L L GC KF+       Q
Sbjct: 538 SLEELSGEILQNMKNLILLNLRGCTGLVSLPKI--SLCSLKILILSGCSKFQKF-----Q 590

Query: 72  V--ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
           V  E+LE L ++GTAI   P S+  ++ L  L  + C    + + C      NL    S 
Sbjct: 591 VISENLETLYLNGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDC-----TNLGNMRS- 644

Query: 130 LGALMLPSLSGLGSLTK-----LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLP 183
           L  L L   S L S  K      +L   G     +P +I  +  L+ L LS+++ + TL 
Sbjct: 645 LQELKLSGCSKLKSFPKNIENLRNLLLEGTAITKMPQNINGMSLLRRLCLSRSDEIYTLQ 704

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS-----SC 238
            + N L++L+ L+L  CK L SL  LPPN++ +  +GC SL T+   L L  S     S 
Sbjct: 705 FNTNELYHLKWLELMYCKNLTSLLGLPPNLQFLYAHGCTSLKTVSSPLALLISTEQIHST 764

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK-WFMYQNEGSSIT 297
            I      L+ + KN +  S        +    H  S      E+P+ W+  +  G ++ 
Sbjct: 765 FIFTNCHELEQVSKNDIMSS--------IQNTRHPTSYDQYNRELPRHWYEGRVNGLALC 816

Query: 298 VTRPSYLCNMNQVVGYAACRVFHVPKHSTG--------IRRFYRYPHPAHVLHCSMDEKF 349
           V   S+    +Q  G      F    H+          +  + + P          +++ 
Sbjct: 817 VA-VSFNNYKDQNNGLQVKCTFEFTDHANVSLSQISFFVGGWTKIP----------EDEL 865

Query: 350 GHRGSDHLWLLYLPRQSYYCNVKWHFE-------SNHFRLSFMDEREKHCPAGSGTGLKV 402
               SDH+++ Y       C    H         S  F ++    + K C        KV
Sbjct: 866 SKIDSDHVFIGYNNWFYIKCEEDRHKNGCVPTNVSLRFEVTDGASKVKEC--------KV 917

Query: 403 KRCGFHPGYMHEVEE-------FDETTK----QWTRFTSYNLNEFHHDFVG 442
            +CGF   Y  E  E       FD  +K    + +   SY   E+  DF G
Sbjct: 918 MKCGFSLIYESEGSEKVSRDATFDANSKIEESKLSETKSYKTAEYDADFYG 968



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP--SNINSLKSLKTLNLLGC 59
           E L  L L+ T I  +P S+  L  L+ L LK CKNL  L   +N+ +++SL+ L L GC
Sbjct: 594 ENLETLYLNGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDCTNLGNMRSLQELKLSGC 653

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
            K ++  +    +E+L  L + GTAI   P +I  M  L+ L
Sbjct: 654 SKLKSFPKN---IENLRNLLLEGTAITKMPQNINGMSLLRRL 692


>gi|242069261|ref|XP_002449907.1| hypothetical protein SORBIDRAFT_05g025450 [Sorghum bicolor]
 gi|241935750|gb|EES08895.1| hypothetical protein SORBIDRAFT_05g025450 [Sorghum bicolor]
          Length = 613

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 32/216 (14%)

Query: 2   ECLREL-------LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL 54
           EC+ EL       L   T I  +P SI  L  L  +   GC  +  LP +   LKS+  L
Sbjct: 159 ECITELSKLQYLSLNGSTQISALPESIGKLERLRYICFSGCSGISELPKSFGDLKSMVRL 218

Query: 55  NLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
           ++ GC     L E+ G ++S+  LD+SG + IR  P S   +K++  L   GC+G     
Sbjct: 219 DMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRE-- 276

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
              LP                  S   L S+  LD+S C  G   +P  IGNL  L+ L 
Sbjct: 277 ---LP-----------------ESFGDLNSMVHLDMSGCS-GLTELPDSIGNLTHLRHLQ 315

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           LS  ++   LP ++  L NL+ L+L  C  ++++P+
Sbjct: 316 LSGCSSLPELPDTLGKLTNLQHLELSGCSSVKAIPE 351



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 38/268 (14%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + I+E+P S   L+ +V L + GC  L  LP +I +L  L+ L L GC     L +T+G+
Sbjct: 272 SGIRELPESFGDLNSMVHLDMSGCSGLTELPDSIGNLTHLRHLQLSGCSSLPELPDTLGK 331

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRR 126
           + +L+ L++SG ++++  P  +  ++ L+  +   C      P +         ++L R 
Sbjct: 332 LTNLQHLELSGCSSVKAIPEPLCGLRQLQCFNMSRCEQIRELPETLMKLENLLHLDLSRC 391

Query: 127 SS--------DLGALM-----------LPSLSG----LGSLTKLDLSDCGLGE--GAIPS 161
           SS        DL AL            L  LSG    L +L  L LS   +    G I S
Sbjct: 392 SSLQHLGGVRDLTALQHLDLSRSWKIGLQDLSGILANLTNLKYLGLSRVIISRKIGRIVS 451

Query: 162 D-IGNLHSLKTLYLSKN-NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
             IG + +L+ L LS N     LPASI  L  L+ L L  C+ L+SLP      E +R  
Sbjct: 452 HWIGGMTNLEHLDLSWNVGLECLPASIGNLQRLQTLDLTACRGLKSLP------ESIRAL 505

Query: 220 GCASLVTLLGALKLRKSSCTIIDFVDSL 247
           G  SLV    + +L   + +++ F  SL
Sbjct: 506 GLKSLVLDSCSNELVDQASSLVHFSKSL 533



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 15/204 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + I E+P S   L  +V+L + GC  +  LP +   LKS+  L++ GC     L E+ G 
Sbjct: 200 SGISELPKSFGDLKSMVRLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESFGD 259

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-NL--MRRS 127
           ++S+  LD+SG + IR  P S   + ++  L   GC+G        LP  I NL  +R  
Sbjct: 260 LKSMVHLDMSGCSGIRELPESFGDLNSMVHLDMSGCSGLTE-----LPDSIGNLTHLRHL 314

Query: 128 SDLGALMLPSL-SGLGSLTK---LDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
              G   LP L   LG LT    L+LS C     AIP  +  L  L+   +S+      L
Sbjct: 315 QLSGCSSLPELPDTLGKLTNLQHLELSGCS-SVKAIPEPLCGLRQLQCFNMSRCEQIREL 373

Query: 183 PASINCLFNLEKLKLEDCKRLQSL 206
           P ++  L NL  L L  C  LQ L
Sbjct: 374 PETLMKLENLLHLDLSRCSSLQHL 397


>gi|215261576|gb|ACJ64856.1| disease resistance protein RPP1-like protein R2 [Arabidopsis
           thaliana]
          Length = 1162

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 34/243 (13%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D + +KE+P ++   + L +L L+ C +LV LPS+I  L SL+ L+L  C      L 
Sbjct: 719 LSDSSYLKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHSCSSLVE-LP 776

Query: 68  TVGQVESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPS-------------- 111
           + G    L++LD+    + ++ PPS      NL+ LS R C+                  
Sbjct: 777 SFGNTTKLKKLDLGKCSSLVKLPPS--INANNLQELSLRNCSRVVKLPAIENATKLRELK 834

Query: 112 ----SASCYLPFPINLMRRSSDLGALMLPSL----SGLGSLTKL---DLSDCGLGEGAIP 160
               S+   LP  I        L      SL    S +G +T L   DL +C      +P
Sbjct: 835 LRNCSSLIELPLSIGTATNLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCS-SLVTLP 893

Query: 161 SDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
           S IGNL  L  L +S+ +    LP +IN L +L  L L DC +L+S P++  ++ ++R+ 
Sbjct: 894 SSIGNLQKLSELLMSECSKLEALPTNIN-LKSLYTLDLTDCTQLKSFPEISTHISELRLK 952

Query: 220 GCA 222
           G A
Sbjct: 953 GTA 955



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            LREL L   + + E+PLSI   + L +L + GC +LV+LPS+I  + +L+  +L  C   
Sbjct: 830  LRELKLRNCSSLIELPLSIGTATNLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSL 889

Query: 63   ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G ++ L EL +S  + +   P++I L K+L TL    C    S       FP 
Sbjct: 890  VTLPSSIGNLQKLSELLMSECSKLEALPTNINL-KSLYTLDLTDCTQLKS-------FP- 940

Query: 122  NLMRRSSDLGALMLPSLS------GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
                 S+ +  L L   +       + S ++L + +    E ++      L  +  L L 
Sbjct: 941  ---EISTHISELRLKGTAIKEVPLSITSWSRLAVYEMSYFE-SLKEFPHALDIITDLLLV 996

Query: 176  KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
              +   +P  +  +  L  L+L +C  L SLPQL  +++
Sbjct: 997  SEDIQEVPPWVKRMSRLRDLRLNNCNNLVSLPQLSDSLD 1035



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 12/170 (7%)

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPFPI 121
           L E   Q+ +L+ +D+S ++      ++    NL+ L  R C+     PSS        I
Sbjct: 704 LWEGTKQLRNLKWMDLSDSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQI 763

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
             +   S L  + LPS      L KLDL  C      +P  I N ++L+ L L   +  V
Sbjct: 764 LDLHSCSSL--VELPSFGNTTKLKKLDLGKCS-SLVKLPPSI-NANNLQELSLRNCSRVV 819

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLP---QLPPNVEKVRVNGCASLVTL 227
            LPA  N    L +LKL +C  L  LP       N++K+ ++GC+SLV L
Sbjct: 820 KLPAIENAT-KLRELKLRNCSSLIELPLSIGTATNLKKLNISGCSSLVKL 868



 Score = 38.1 bits (87), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           LPS      L +LD+SD  L +  +      L +LK + LS ++++    +++   NLE+
Sbjct: 682 LPSTFNPEFLVELDMSDSNLRK--LWEGTKQLRNLKWMDLSDSSYLKELPNLSTATNLEE 739

Query: 195 LKLEDCKRLQSLPQLPPNVEKVR------VNGCASLVTL 227
           LKL +C    SL +LP ++EK+       ++ C+SLV L
Sbjct: 740 LKLRNC---SSLVELPSSIEKLTSLQILDLHSCSSLVEL 775


>gi|224143578|ref|XP_002336058.1| predicted protein [Populus trichocarpa]
 gi|222869691|gb|EEF06822.1| predicted protein [Populus trichocarpa]
          Length = 722

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 172/421 (40%), Gaps = 83/421 (19%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L+D   + E+P S++ L  L +L L  C NL   P  +   K LK L++  C        
Sbjct: 322 LVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFP--MLDSKVLKVLSISRCLDMTKC-P 378

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
           T+ Q  +++ L +  T+I+  P SI     L+ L   GC       S    FP      S
Sbjct: 379 TISQ--NMKSLYLEETSIKEVPQSI--TSKLENLGLHGC-------SKITKFP----EIS 423

Query: 128 SDLGALMLP---------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            D+  L L          S+  L  L  LD+S C   E + P     + SL  L LSK  
Sbjct: 424 GDVKTLYLSGTAIKEVPSSIQFLTRLCVLDMSGCSKLE-SFPEIAVPMKSLVDLNLSKTG 482

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSC 238
              +P+S   + +L  L L+       + +LP +++ ++         L+ A+ L+  S 
Sbjct: 483 IKEIPSSFKQMISLRSLGLDGT----PIEELPLSIKDMK--------PLIAAMHLKIQSG 530

Query: 239 TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
             I                            P  +  +V+PGSEIP+WF  +  GSS+T+
Sbjct: 531 DKI----------------------------PYDRIQMVLPGSEIPEWFSDKGIGSSLTI 562

Query: 299 TRPSYLCNMNQVVGYAACRVFHVPKHS-TGIRRFYRYPHPAHVLHCSMDEKFG-HRGSDH 356
             P+   N +Q+ G A C VF +P  S   +  F  +P       C +  K G H G D 
Sbjct: 563 QLPT---NCHQLKGIAFCLVFLLPLPSHEMLYEFDDHPEVRVYFDCHVKSKKGEHDGDDE 619

Query: 357 LWLLYLPRQSYYC-NVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEV 415
              +++ ++SY   N     +S+H  L +  E   H    SG  +  K       + HEV
Sbjct: 620 --EVFVSKKSYSIFNFLKTCDSDHMFLHYELELVNHFRKYSGNEVTCK-------FYHEV 670

Query: 416 E 416
           +
Sbjct: 671 D 671



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 28/142 (19%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR--------------------LPS 43
           ++ L L++T IKE+P SI   S L  L L GC  + +                    +PS
Sbjct: 384 MKSLYLEETSIKEVPQSIT--SKLENLGLHGCSKITKFPEISGDVKTLYLSGTAIKEVPS 441

Query: 44  NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
           +I  L  L  L++ GC K E+  E    ++SL +L++S T I+  PSS   M +L++L  
Sbjct: 442 SIQFLTRLCVLDMSGCSKLESFPEIAVPMKSLVDLNLSKTGIKEIPSSFKQMISLRSL-- 499

Query: 104 RGCNGPPSSASCYLPFPINLMR 125
            G +G P      LP  I  M+
Sbjct: 500 -GLDGTPIEE---LPLSIKDMK 517


>gi|186478922|ref|NP_174037.3| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192668|gb|AEE30789.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 34/308 (11%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 915  TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 973

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
            +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 974  LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 1033

Query: 121  INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 1034 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 1092

Query: 174  LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--------V 225
            L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL        +
Sbjct: 1093 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL 1152

Query: 226  TLLGALKLRKSSCTI----IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF--SIVVP 279
            T+L  L L   +  +    ++ + +LK L   G   +      + +S  S K   ++ +P
Sbjct: 1153 TILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLP 1212

Query: 280  GSEIPKWF 287
            G+ +P WF
Sbjct: 1213 GNRVPDWF 1220



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 693 EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 752

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 753 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 806

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 807 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 865

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 866 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 898



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 752 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 809

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 810 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 864

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 865 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 923

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 924 IGALHFIRELELRNCKFLKFLPK 946



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
            ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 810  LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 869

Query: 59   ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                 C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 870  VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 929

Query: 98   LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
            ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 930  IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 985

Query: 153  GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
             + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 986  KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 1029


>gi|345293121|gb|AEN83052.1| AT5G17680-like protein, partial [Capsella rubella]
          Length = 196

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 93/199 (46%), Gaps = 20/199 (10%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           L GC  L   P  I    S      L     + L E +G + +LE L  S T IR  P S
Sbjct: 1   LSGCSLLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASKTVIRRAPWS 60

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           I  +  L+ L+           S Y P           L     P LS    L  L LS+
Sbjct: 61  IAKLSRLQLLAI--------GNSSYTP---------EGLLHSACPPLSRFDDLRALSLSN 103

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLP 210
             + E  IP+ IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP
Sbjct: 104 MNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASIKRLTKLNRLNLNNCQRLQALPDELP 161

Query: 211 PNVEKVRVNGCASLVTLLG 229
             +  + ++GC SLV++ G
Sbjct: 162 RGLLYIYIHGCTSLVSISG 180


>gi|168068753|ref|XP_001786194.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661953|gb|EDQ48994.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 517

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 112/223 (50%), Gaps = 28/223 (12%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D   ++ +P SI  L+ LV+L L+ CK++  LP +I +L SL  LNL GC   E L E++
Sbjct: 69  DCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRSLEALSESI 128

Query: 70  GQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           G + SL EL++ G  +++  P SI  + +L  L    C    +     LP          
Sbjct: 129 GNLNSLVELNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKA-----LP---------- 173

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
                   S+  L SL KL+L DC   E  + S IGNL+SL  L L +  +   LP SI 
Sbjct: 174 -------ESIGNLNSLVKLNLGDCQSLEALLKS-IGNLNSLVDLDLFRCRSLKALPESIA 225

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
            L +L KL L  C+ L++L +   N+    ++ ++ C SL  L
Sbjct: 226 NLNSLVKLNLYGCRSLEALQESIGNLNSLVELNLSACVSLKAL 268



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 122/244 (50%), Gaps = 32/244 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+ LV+L L GC++L  L  +I +L SL  LNL  C   + L +++G + 
Sbjct: 217 LKALPESIANLNSLVKLNLYGCRSLEALQESIGNLNSLVELNLSACVSLKALRDSIGNLN 276

Query: 74  SLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASC------------- 115
           SLE+ D+ +  +++  P SI  + +L  L+   C      P S  +              
Sbjct: 277 SLEDFDLYTCGSLKALPESIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVDLNLYGCVS 336

Query: 116 --YLPFPINLMRRSSDL-----GAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNL 166
              LP  I  +    DL     G+L  LP S+  L SL KL+L DC   E A+P  IGNL
Sbjct: 337 LKALPESIGNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLE-ALPKSIGNL 395

Query: 167 HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN-VEKVRVN--GCAS 223
           +SL  L + K +   L  SI  L +L KL L  C+ L++LP+   N +  V +N  GC S
Sbjct: 396 NSLLDLRVCK-SLKALRESIGNLNSLVKLNLYGCRSLEALPESIGNLISLVDLNLYGCVS 454

Query: 224 LVTL 227
           L  L
Sbjct: 455 LKAL 458



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 115/225 (51%), Gaps = 18/225 (8%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+ LV+L L  C++L  LP +I +L SL  LNL GC   + L E++G + 
Sbjct: 289 LKALPESIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLN 348

Query: 74  SLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-NL-----MRR 126
           SL +LD+ +  +++  P SI  + +L  L+   C    +     LP  I NL     +R 
Sbjct: 349 SLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEA-----LPKSIGNLNSLLDLRV 403

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
              L AL   S+  L SL KL+L  C   E A+P  IGNL SL  L L    +   LP S
Sbjct: 404 CKSLKALR-ESIGNLNSLVKLNLYGCRSLE-ALPESIGNLISLVDLNLYGCVSLKALPES 461

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
           I  L +L  L L  C  L++LP+   N+    K+ +  C SL  L
Sbjct: 462 IGNLNSLVDLDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEAL 506



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 112/223 (50%), Gaps = 12/223 (5%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+  VQL L GC +L  LP +I +L SL  LNL  C   E L +++G + 
Sbjct: 25  LKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLN 84

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL +LD+    +++  P SI  + +L  L+  GC    + +       +N +   +  G 
Sbjct: 85  SLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRSLEALSESI--GNLNSLVELNLYGC 142

Query: 133 LMLP----SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
           + L     S+  L SL  LDL  CG    A+P  IGNL+SL  L L    +   L  SI 
Sbjct: 143 VSLKALPESIGNLNSLVDLDLYTCG-SLKALPESIGNLNSLVKLNLGDCQSLEALLKSIG 201

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
            L +L  L L  C+ L++LP+   N+    K+ + GC SL  L
Sbjct: 202 NLNSLVDLDLFRCRSLKALPESIANLNSLVKLNLYGCRSLEAL 244



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 9/199 (4%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+ LV L L  C++L  LP +I +L S   L L GC   + L E++G + 
Sbjct: 1   LKALPESIGNLNSLVDLDLFRCRSLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLN 60

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSS 128
           SL +L++    ++   P SI  + +L  L  R C      P S  +      +NL    S
Sbjct: 61  SLVKLNLGDCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRS 120

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNFVTLPASIN 187
            L AL   S+  L SL +L+L  C +   A+P  IGNL+SL  L L +  +   LP SI 
Sbjct: 121 -LEALS-ESIGNLNSLVELNLYGC-VSLKALPESIGNLNSLVDLDLYTCGSLKALPESIG 177

Query: 188 CLFNLEKLKLEDCKRLQSL 206
            L +L KL L DC+ L++L
Sbjct: 178 NLNSLVKLNLGDCQSLEAL 196


>gi|357513917|ref|XP_003627247.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521269|gb|AET01723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1085

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 38/302 (12%)

Query: 91   SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLS 150
            S+F +KNL+ L   GC+   S  S              +  AL   S++   ++ +LDL 
Sbjct: 723  SVFSLKNLEKLDLSGCSSLKSLQSN-THLSSLSYLSLYNCTALKEFSVTS-ENINELDLE 780

Query: 151  DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP 210
               + E  +PS IG    L+ LYL   +  +LP SI  L  L  L L  C  LQ+LP+LP
Sbjct: 781  LTSIKE--LPSSIGLQTKLEKLYLGHTHIESLPKSIKNLTRLRHLDLHHCSELQTLPELP 838

Query: 211  PNVEKVRVNGCASL-------------------VTLLGALKLRKSSCTIIDFVDSLKLLG 251
            P++E +  +GC SL                   VT    LKL + S   I+    + ++ 
Sbjct: 839  PSLETLDADGCVSLENVAFRSTASEQLKEKKKKVTFWNCLKLNEPSLKAIELNAQINMMN 898

Query: 252  KNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMY---QNEGSSITVTRPSYLCNMN 308
             +   I+  R+         ++   V PGS+IP+W  Y   +++  +I +    Y   + 
Sbjct: 899  FSHKHITWDRD----RDHDHNQGMYVYPGSKIPEWLEYSTTRHDYITIDLFSAPYFSKLG 954

Query: 309  QVVGYAACRVFHVPKHST--GIRRFYRYPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQS 366
             + G      F +P  S+     +F         +   +D       SDH++L+Y PR S
Sbjct: 955  FIFG------FVIPTISSEGSTLKFKISDGEDEGIKMYLDRPRHGIESDHVYLVYDPRCS 1008

Query: 367  YY 368
            +Y
Sbjct: 1009 HY 1010


>gi|2832633|emb|CAA16762.1| putative protein [Arabidopsis thaliana]
 gi|7268700|emb|CAB78907.1| putative protein [Arabidopsis thaliana]
          Length = 1405

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 27/223 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L + KT + E+  +I  +  L +L L+ C  +  LPS I  L  L+  ++ GC K +
Sbjct: 681 LRILDMSKTSLPELADTIADVVNLNKLLLRNCSLIEELPS-IEKLTHLEVFDVSGCIKLK 739

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           N+  + G++  L E+++S T +   P  I  + NLK L  R C+   +            
Sbjct: 740 NINGSFGEMSYLHEVNLSETNLSELPDKISELSNLKELIIRKCSKLKT------------ 787

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                      LP+L  L +L   D+S C   E  I     NL  L  + LS+ N   LP
Sbjct: 788 -----------LPNLEKLTNLEIFDVSGCTELE-TIEGSFENLSCLHKVNLSETNLGELP 835

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV--RVNGCASL 224
             I+ L NL++L L +C +L++LP L      V   V+GC +L
Sbjct: 836 NKISELSNLKELILRNCSKLKALPNLEKLTHLVIFDVSGCTNL 878



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 24/152 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L E+ L +T++ E+P  I  LS L +L ++ C  L  LP N+  L +L+  ++ GC 
Sbjct: 748 MSYLHEVNLSETNLSELPDKISELSNLKELIIRKCSKLKTLP-NLEKLTNLEIFDVSGCT 806

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + E +  +   +  L ++++S T +   P+ I  + NLK L  R C              
Sbjct: 807 ELETIEGSFENLSCLHKVNLSETNLGELPNKISELSNLKELILRNC-------------- 852

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
                  S L A  LP+L  L  L   D+S C
Sbjct: 853 -------SKLKA--LPNLEKLTHLVIFDVSGC 875



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 108/266 (40%), Gaps = 46/266 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L  ++L +    E+ LS+  L  L  L ++ C +L+     ++ L+ L  L + G  
Sbjct: 444 MQDLEVVVLFEPTFHELVLSLSKLKKLRVLVIRDC-DLIDNIDKLSGLQGLHVLEVSGAS 502

Query: 61  KFENLLETV-GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
              N+ +     +  L+ L++SG AI+  PS+I  +  L+    R C     S    LP 
Sbjct: 503 SLVNIPDDFFKNMTQLQSLNLSGLAIKSSPSTIEKLSMLRCFILRHC-----SELQDLPN 557

Query: 120 PINLMRRSSDL---GALMLPS-----------------LSGLGSLTKLDLSDCGLGEGAI 159
            I   R+   +   GA  L S                  + L  L  LD S+  +    I
Sbjct: 558 FIVETRKLEVIDIHGARKLESYFDRVKDWKDYKGKNKNFAQLQLLEHLDFSETKIIRLPI 617

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP--NVEKVR 217
                  H    L  S N+F T+P        L +L L +C RL+ LPQL P  N++ + 
Sbjct: 618 ------FH----LKDSTNDFSTMPI-------LTRLLLRNCTRLKRLPQLRPLTNLQILD 660

Query: 218 VNGCASLVTLLGALKLRKSSCTIIDF 243
             G   LV +L      K    I+D 
Sbjct: 661 ACGATDLVEMLEVCLEEKKELRILDM 686


>gi|224133498|ref|XP_002328057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222837466|gb|EEE75845.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1187

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 87/163 (53%), Gaps = 5/163 (3%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E +R LLLD+T I+E+P SIE L+ LV L +  CK L +LPS+I  LK L+   L GC K
Sbjct: 763 ENIRVLLLDRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGCSK 822

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            E   E    ++SL+ L +  TAI+  PSSI   ++ K+L F   +G        LP P 
Sbjct: 823 LETFPEIKRPMKSLKTLYLGRTAIKKLPSSI---RHQKSLIFLELDGASMKELLELP-PS 878

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDI 163
             +  + D  +L   S   L    +L+L++C    + AI  D+
Sbjct: 879 LCILSARDCESLETISSGTLSQSIRLNLANCFRFDQNAIMEDM 921



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 79/348 (22%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVES--LEE------ 77
            L  + L GC++L R+PS+   L+ LK L+L  C    NL+    +++S  LE+      
Sbjct: 656 NLEYINLSGCESLKRVPSSFQHLEKLKCLDLTDC---HNLITLPRRIDSKCLEQLFITGC 712

Query: 78  ---------------LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS----------- 111
                          LD+SGT++   P SI     L+ +S  GC                
Sbjct: 713 SNVRNCPETYADIGYLDLSGTSVEKVPLSI----KLRQISLIGCKNITKFPVISENIRVL 768

Query: 112 ----SASCYLPFPINLMRRSSDLGALMLPSLSGLGS-------LTKLDLSDCGLGEGAIP 160
               +A   +P  I  + +   L       LS L S       L    LS C   E   P
Sbjct: 769 LLDRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGCSKLE-TFP 827

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
                + SLKTLYL +     LP+SI    +L  L+L D   ++ L +LPP++  +    
Sbjct: 828 EIKRPMKSLKTLYLGRTAIKKLPSSIRHQKSLIFLEL-DGASMKELLELPPSLCILSARD 886

Query: 221 CASLV-----TLLGALKLRKSSCTIID---FVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
           C SL      TL  +++L  ++C   D    ++ ++L  ++G    M             
Sbjct: 887 CESLETISSGTLSQSIRLNLANCFRFDQNAIMEDMQLKIQSGNIGDM------------- 933

Query: 273 KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFH 320
            F I+ PGSEIP WF+ ++ GSS+ +  PS   + +++   A C + H
Sbjct: 934 -FQILSPGSEIPHWFINRSWGSSVAIQLPS---DCHKLKAIAFCLIVH 977


>gi|296089460|emb|CBI39279.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 104/220 (47%), Gaps = 24/220 (10%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           +LD   IK +P SI  L+ L  L LK C+NL  LP+ I  L  L TLNL  C    +L  
Sbjct: 14  VLDGVAIKGLPCSISHLTQLDYLCLKNCRNLRSLPNTIGHLTRLSTLNLEECRNLRSLPN 73

Query: 68  TVGQVESLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           T+  ++SL+ L + S +++   P  +  M++L+ L+  G                     
Sbjct: 74  TICGLKSLKTLGLDSCSSVEAFPEIMEDMEHLEELNLCG--------------------- 112

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
            +D+  L   S+  L  L  L L+ C      IPSD+  L SLK L LS N+   +P  I
Sbjct: 113 -TDISELP-SSIEHLRGLWHLQLNKCEKLVREIPSDLWCLSSLKFLNLSGNHIRCVPVGI 170

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
             L  L  L +  C  L+ + +LP ++  +R +GC  L T
Sbjct: 171 IQLSRLFTLFVNHCPMLEEIGELPSSLGWIRAHGCPCLET 210



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 49/107 (45%), Gaps = 25/107 (23%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGC 59
           ME L EL L  TDI E+P SIE L GL  L L  C+ LVR +PS++  L SLK LNL   
Sbjct: 102 MEHLEELNLCGTDISELPSSIEHLRGLWHLQLNKCEKLVREIPSDLWCLSSLKFLNL--- 158

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
                                SG  IRC P  I  +  L TL    C
Sbjct: 159 ---------------------SGNHIRCVPVGIIQLSRLFTLFVNHC 184


>gi|357486941|ref|XP_003613758.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515093|gb|AES96716.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1095

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 127/301 (42%), Gaps = 49/301 (16%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L++L LD    + E+  SI  L  L  L L  C +L  LP  IN L SLKT++L  C   
Sbjct: 657 LKKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGIN-LPSLKTMSLRNCTTV 715

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-- 120
           +N  E +G++E+++ L +S + I   P SI L+  L  L+   CN      S     P  
Sbjct: 716 KNFPEILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLELPSSIFMLPKL 775

Query: 121 -----------INLMRRSSDLGALMLPSLSGLGSL---TKLDLSDCGLGEGAIPSDIGNL 166
                        + +R   +   +   +    S      +DLS C L    + + +  L
Sbjct: 776 ETLEAYCCRGLARIKKRKGQVPETLPSDVRNASSCLVHRDVDLSFCYLPYEFLATLLPFL 835

Query: 167 HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
           H +  + L  ++   LP+SIN  ++L KL + +C  L+ +  LPPN++ +    C SL +
Sbjct: 836 HYVTNISLDYSSITILPSSINACYSLMKLTMNNCTELREIRGLPPNIKHLGAINCESLTS 895

Query: 227 LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKW 286
               + L              ++L  +G+                    I+ PGS IP W
Sbjct: 896 QSKEMLLN-------------QMLLNSGIKY------------------IIYPGSSIPSW 924

Query: 287 F 287
           F
Sbjct: 925 F 925


>gi|227438223|gb|ACP30601.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 158/358 (44%), Gaps = 72/358 (20%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVES- 74
            ++P SI   + L +L L+ C+N+  +P+ I SLKSLK LN  GC +    + T  Q+ S 
Sbjct: 673  KLPSSIPHPNKLKKLDLRNCRNVETIPTGI-SLKSLKDLNTKGCSR----MRTFPQISST 727

Query: 75   LEELDISGTAIRCPPSSIFL-MKNLKTLSFRGCNGPPSSAS-CYLPFPINLMRRSSDLGA 132
            +E++DI  T I    S++ L  +NL T +             CY+ F I   + S++   
Sbjct: 728  IEDVDIDATFIEEIRSNLSLCFENLHTFTMHSPKKLWERVQVCYIVF-IGGKKSSAEYDF 786

Query: 133  LMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
            + L       SL  LDLSD  GL E  +PS   NLH+L  L +    N  TLP  IN L 
Sbjct: 787  VYLSP-----SLWHLDLSDNPGLVE--LPSSFKNLHNLSRLKIRNCVNLETLPTGIN-LG 838

Query: 191  NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF--VDSLK 248
            +L ++ L  C RL++ PQ+  N++++           L    + +  C I  F  ++SL+
Sbjct: 839  SLSRVDLSGCSRLRTFPQISTNIQELD----------LSETGIEEVPCWIEKFSRLNSLQ 888

Query: 249  LLGKNGLA-----ISMLREFL---------EVVSAPSHKFSIVV---------------- 278
            + G N L      IS  +            E   +  H F I +                
Sbjct: 889  MKGCNNLEYVNLNISDCKSLTGASWNNHPRESALSYYHSFDIGIDFTKCLNLVQEALFQK 948

Query: 279  ----------PGSEIPKWFMYQNEGSSITVTRPSYLCNMNQ-VVGYAACRVFHVPKHS 325
                       G E+P +F ++  G+S ++T P    ++ Q  + + AC VF   K S
Sbjct: 949  KTYFGCQLKLSGEEVPSYFTHRTTGTSSSLTIPLLHSSLTQPFLRFRACIVFDSDKES 1006



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 6/101 (5%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   + E+P S + L  L +L ++ C NL  LP+ IN L SL  ++L GC +    L 
Sbjct: 798 LSDNPGLVELPSSFKNLHNLSRLKIRNCVNLETLPTGIN-LGSLSRVDLSGCSR----LR 852

Query: 68  TVGQVES-LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           T  Q+ + ++ELD+S T I   P  I     L +L  +GCN
Sbjct: 853 TFPQISTNIQELDLSETGIEEVPCWIEKFSRLNSLQMKGCN 893


>gi|167999638|ref|XP_001752524.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696424|gb|EDQ82763.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 539

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 28/225 (12%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L+D   ++ +P+SI+ L+ L  L +KGC +L+ LP+ + +L SL TL++  C    +L  
Sbjct: 33  LIDCESLRILPMSIKSLNSLENLNMKGCYSLISLPNELGNLTSLTTLDISYCLSLTSLPN 92

Query: 68  TVGQVESLEELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            +G + SL  LDIS  +++   P+ +  + +L  L    C+   S     LP        
Sbjct: 93  ELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTALYVNDCSSLTS-----LP-------- 139

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
            +DLG         L SL  LDLSDC     ++P+++GNL +L TL LS      +LP  
Sbjct: 140 -NDLG--------NLTSLITLDLSDCK-RLTSLPNELGNLKALTTLDLSDCKRLTSLPNE 189

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ---LPPNVEKVRVNGCASLVTL 227
           ++ L +L  L + DC  L  LP    +  ++  + +  C SL++L
Sbjct: 190 LDNLTSLTTLDISDCSSLTLLPNKLGILTSLTTLNMRRCRSLISL 234



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 124/246 (50%), Gaps = 29/246 (11%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M  L EL L+  ++++ +P +I+ L  L +L L  C++L  LP +I SL SL+ LN+ GC
Sbjct: 1   MATLLELDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKGC 60

Query: 60  FKFENLLETVGQVESLEELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
           +   +L   +G + SL  LDIS   ++   P+ +  + +L TL    C     S+   LP
Sbjct: 61  YSLISLPNELGNLTSLTTLDISYCLSLTSLPNELGNLTSLTTLDISYC-----SSLTLLP 115

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-N 177
                    ++LG         L SLT L ++DC     ++P+D+GNL SL TL LS   
Sbjct: 116 ---------NELG--------NLTSLTALYVNDCS-SLTSLPNDLGNLTSLITLDLSDCK 157

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTLLGALKLR 234
              +LP  +  L  L  L L DCKRL SLP    N+  +    ++ C+SL  L   L + 
Sbjct: 158 RLTSLPNELGNLKALTTLDLSDCKRLTSLPNELDNLTSLTTLDISDCSSLTLLPNKLGIL 217

Query: 235 KSSCTI 240
            S  T+
Sbjct: 218 TSLTTL 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 59/277 (21%)

Query: 9   LDKTDIK---EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
           LD +D K    +P  ++ L+ L  L +  C +L  LP+ +  L SL TLN+  C    +L
Sbjct: 175 LDLSDCKRLTSLPNELDNLTSLTTLDISDCSSLTLLPNKLGILTSLTTLNMRRCRSLISL 234

Query: 66  LETVGQVESLEELDIS--GTAIRCP-----------------PSSIFL------MKNLKT 100
               G + SL  LDIS   ++   P                 PS I L         L T
Sbjct: 235 PNEFGNLTSLTILDISYCSSSTSLPNELGNLISLTTLNISYYPSLILLPNDIGNFTTLTT 294

Query: 101 LSFRGCN---------GPPSSASCY----LPFPINLMRRSSDLGALM---------LPSL 138
           L+   C+         G  +S +          I+L+ +  +L  L          + SL
Sbjct: 295 LNISYCSSLTLLPNELGNLTSLTILDTTNFSSLISLVNKLDNLAFLTTLCITNWSSITSL 354

Query: 139 SG----LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           S     L SLT L +++C     ++P+++GNL SL TLY+S  +N   LP  +  L +L 
Sbjct: 355 SNELGNLTSLTTLYITNCS-SLTSLPNELGNLTSLTTLYISNCSNLTLLPNELGNLTSLT 413

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
            L + +C  L SLP    N+  +    +  C+SL +L
Sbjct: 414 TLDISNCSSLISLPNELDNLTSLTALYIIDCSSLTSL 450



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 31/202 (15%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           L  L  L +    +L+ LP++I +  +L TLN+  C     L   +G + SL  LD +  
Sbjct: 265 LISLTTLNISYYPSLILLPNDIGNFTTLTTLNISYCSSLTLLPNELGNLTSLTILDTTNF 324

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM--------- 134
           +     S I L+  L  L+F        +  C   +  ++   S++LG L          
Sbjct: 325 S-----SLISLVNKLDNLAFL-------TTLCITNWS-SITSLSNELGNLTSLTTLYITN 371

Query: 135 ------LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
                 LP+ L  L SLT L +S+C      +P+++GNL SL TL +S  ++ ++LP  +
Sbjct: 372 CSSLTSLPNELGNLTSLTTLYISNCS-NLTLLPNELGNLTSLTTLDISNCSSLISLPNEL 430

Query: 187 NCLFNLEKLKLEDCKRLQSLPQ 208
           + L +L  L + DC  L SLP 
Sbjct: 431 DNLTSLTALYIIDCSSLTSLPN 452


>gi|295830827|gb|ADG39082.1| AT5G17680-like protein [Capsella grandiflora]
          Length = 183

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 26/172 (15%)

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS---ASCYLP 118
            + L E +G + +LE L  S T IR  P SI  +  L+ L+    +  P     ++C   
Sbjct: 28  IKELPENIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAIGNSSXTPEGLLHSAC--- 84

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
                            P LS    L  L LS+  + E  IP+ IGNL +L  L LS NN
Sbjct: 85  -----------------PPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNN 125

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
           F  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 126 FKFVPASIKRLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 177


>gi|421898613|ref|ZP_16328979.1| probable popc protein [Ralstonia solanacearum MolK2]
 gi|206589819|emb|CAQ36780.1| probable popc protein [Ralstonia solanacearum MolK2]
          Length = 850

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 31/229 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L ++ L+  D+  +P  I  L+ L +LTL    NL RLP ++N+L +L+TL L       
Sbjct: 219 LHKIFLEDCDLHALPGEIGNLNQLQELTLLYHPNLRRLPDSLNNLSALETLELRET-GLT 277

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           NL E + ++  L+ L +  T +   P  I  ++NLK L+F   N                
Sbjct: 278 NLPE-INRLSQLKTLTVVDTRLSAMPPEISALRNLKHLTFDHTN---------------- 320

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
           +R        + P++  L  L  L LS     + A+P+ IGNL +L+   ++      TL
Sbjct: 321 IRD-------VPPTIGNLLHLKSLALSRNHHLQ-AVPASIGNLSALEEFKVNGCQQLQTL 372

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ----LPPNVEKVRVNGCASLVTL 227
           P +I  L +L+KL + DC +LQ+LP+    L P++ ++ +NGC +L  L
Sbjct: 373 PDTIGNLRHLKKLYVRDCSQLQTLPESIANLMPHLRRLDLNGCTNLQRL 421



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L+ L  D T+I+++P +I  L  L  L L    +L  +P++I +L +L+   + GC 
Sbjct: 308 LRNLKHLTFDHTNIRDVPPTIGNLLHLKSLALSRNHHLQAVPASIGNLSALEEFKVNGCQ 367

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIF-LMKNLKTLSFRGCNGPPSSASCYLP 118
           + + L +T+G +  L++L +   + ++  P SI  LM +L+ L   GC       +C L 
Sbjct: 368 QLQTLPDTIGNLRHLKKLYVRDCSQLQTLPESIANLMPHLRRLDLNGCTNLQRLPACLLN 427

Query: 119 FPINL 123
            P +L
Sbjct: 428 PPPHL 432


>gi|168057243|ref|XP_001780625.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667893|gb|EDQ54511.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 277

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 13/214 (6%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +K +P  +  L+ LV+L L GC  L  LP ++ +L SL  LNL GC   E L +++G +
Sbjct: 67  SLKALPEGMGNLNSLVELNLYGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKSMGNL 126

Query: 73  ESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCYLPFPINLMRRS 127
            SL ELD+S   +++  P S+  + +L  L+  GC      P S  +      ++L    
Sbjct: 127 NSLVELDLSSCGSLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDL---- 182

Query: 128 SDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPA 184
           S  G+L  LP S+  L SL +L+L+ C   E A+P  +GNL+SL  L L+   ++  LP 
Sbjct: 183 SSCGSLKALPKSMDNLNSLVELNLNGCVYLE-ALPKSMGNLNSLVELNLNGCVYLEALPK 241

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           S+  L  L +L L  CK L++LP+   N++ ++V
Sbjct: 242 SMGNLNCLVQLDLRGCKSLEALPKSIGNLKNLKV 275



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 114/224 (50%), Gaps = 12/224 (5%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +K +P SI   + LV+L L GC +L  LP  + +L SL  LNL GC   E L +++G +
Sbjct: 43  SLKALPQSIGNSNSLVKLNLYGCGSLKALPEGMGNLNSLVELNLYGCVYLEALPKSMGNL 102

Query: 73  ESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRS 127
            SL EL+++G   +   P S+  + +L  L    C      P S  +      +NL    
Sbjct: 103 NSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSLKALPKSMGNLNSLVELNL-NGC 161

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASI 186
             L AL   S+  L SL +LDLS CG    A+P  + NL+SL  L L+   ++  LP S+
Sbjct: 162 VYLEALP-KSMGNLNSLVELDLSSCG-SLKALPKSMDNLNSLVELNLNGCVYLEALPKSM 219

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
             L +L +L L  C  L++LP+   N+    ++ + GC SL  L
Sbjct: 220 GNLNSLVELNLNGCVYLEALPKSMGNLNCLVQLDLRGCKSLEAL 263



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 30/220 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++ +P S+  L+ LV L +  C +L  LP +I +  SL  LNL GC   + L E +G + 
Sbjct: 20  LEALPESMGNLNSLVVLYVNECGSLKALPQSIGNSNSLVKLNLYGCGSLKALPEGMGNLN 79

Query: 74  SLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL EL++ G   +   P S+  + +L  L+  GC         YL               
Sbjct: 80  SLVELNLYGCVYLEALPKSMGNLNSLVELNLNGC--------VYLEA------------- 118

Query: 133 LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASINCLF 190
             LP S+  L SL +LDLS CG    A+P  +GNL+SL  L L+   ++  LP S+  L 
Sbjct: 119 --LPKSMGNLNSLVELDLSSCG-SLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLN 175

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
           +L +L L  C  L++LP+   N+    ++ +NGC  L  L
Sbjct: 176 SLVELDLSSCGSLKALPKSMDNLNSLVELNLNGCVYLEAL 215


>gi|345293111|gb|AEN83047.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|345293113|gb|AEN83048.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|345293125|gb|AEN83054.1| AT5G17680-like protein, partial [Capsella rubella]
          Length = 196

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 93/199 (46%), Gaps = 20/199 (10%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           L GC  L   P  I    S      L     + L E +G + +LE L  S T IR  P S
Sbjct: 1   LSGCSLLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASKTVIRRAPWS 60

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           I  +  L+ L+           S Y P           L     P LS    L  L LS+
Sbjct: 61  IAKLSRLQLLAI--------GNSSYTP---------EGLLHSACPPLSRFDDLRALSLSN 103

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLP 210
             + E  IP+ IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP
Sbjct: 104 MNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASIKRLTKLNRLNLNNCQRLQALPDELP 161

Query: 211 PNVEKVRVNGCASLVTLLG 229
             +  + ++GC SLV++ G
Sbjct: 162 RGLLYIYIHGCTSLVSISG 180


>gi|125525266|gb|EAY73380.1| hypothetical protein OsI_01261 [Oryza sativa Indica Group]
          Length = 1264

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 117/261 (44%), Gaps = 38/261 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L  L L   +   +P SI  L  L  L L  C  LV LPS+I +L+SL  LNL GC 
Sbjct: 613 LENLEILNLSACNFHSLPDSIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGCG 672

Query: 61  KFENLLETVGQVESLEELDISG-------------------------TAIRCPPSSIFLM 95
             E L +T+  +++L  L++S                          T +   P+SI  +
Sbjct: 673 NLEILPDTICSLQNLHFLNLSRCGVLQALPKNIGNLSNLLHLNLSQCTDLESIPTSIGRI 732

Query: 96  KNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLS 150
           K+L  L    C+     P S    +    + ++  S    +L LP S S L +L  LDLS
Sbjct: 733 KSLHILDLSHCSSLSELPGSIGGLH---ELQILILSHHASSLALPVSTSHLPNLQTLDLS 789

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ- 208
              L    +P  IGNLHSLKTL L +  +   LP SI  L  LE L    C+ L  LP  
Sbjct: 790 -WNLSLEELPESIGNLHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDG 848

Query: 209 --LPPNVEKVRVNGCASLVTL 227
                N++ +R + C SL  L
Sbjct: 849 MTRITNLKHLRNDQCRSLKQL 869



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 27/218 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L  + I E+P S+  L  L  L L     +  LP+ I+SL +L+TL+L  C    
Sbjct: 546 LRVLDLRGSQIMELPQSVGKLKHLRYLDLSSSL-ISTLPNCISSLHNLQTLHLYNCINLN 604

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L  +V  +E+LE L++S       P SI  ++NL+ L+   C+           F + L
Sbjct: 605 VLPMSVCALENLEILNLSACNFHSLPDSIGHLQNLQDLNLSLCS-----------FLVTL 653

Query: 124 MRRSSDLGALMLPSLSGLGSLTK-------------LDLSDCGLGEGAIPSDIGNLHSLK 170
                 L +L L +L G G+L               L+LS CG+ + A+P +IGNL +L 
Sbjct: 654 PSSIGTLQSLHLLNLKGCGNLEILPDTICSLQNLHFLNLSRCGVLQ-ALPKNIGNLSNLL 712

Query: 171 TLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            L LS+  +  ++P SI  + +L  L L  C  L  LP
Sbjct: 713 HLNLSQCTDLESIPTSIGRIKSLHILDLSHCSSLSELP 750


>gi|345293117|gb|AEN83050.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|345293119|gb|AEN83051.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|345293123|gb|AEN83053.1| AT5G17680-like protein, partial [Capsella rubella]
          Length = 196

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 93/199 (46%), Gaps = 20/199 (10%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           L GC  L   P  I    S      L     + L E +G + +LE L  S T IR  P S
Sbjct: 1   LSGCSLLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASKTVIRRAPWS 60

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           I  +  L+ L+           S Y P           L     P LS    L  L LS+
Sbjct: 61  IAKLSRLQLLAI--------GNSSYTP---------EGLLHSACPPLSRFDDLRALSLSN 103

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLP 210
             + E  IP+ IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP
Sbjct: 104 MNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASIKRLTKLNRLNLNNCQRLQALPDELP 161

Query: 211 PNVEKVRVNGCASLVTLLG 229
             +  + ++GC SLV++ G
Sbjct: 162 RGLLYIYIHGCTSLVSISG 180


>gi|296080997|emb|CBI18501.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 1/122 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L +L L    I+E+P SI  L+GLV L LK CKNL  LP++I  LKSL+ L L GC 
Sbjct: 157 MENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSGCS 216

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E+  E +  +++L+EL + GT I   PSSI  +K L  L+ R C      A C L F 
Sbjct: 217 KLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNLVICA-CLLVFL 275

Query: 121 IN 122
           ++
Sbjct: 276 VS 277



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 72/169 (42%), Gaps = 24/169 (14%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
           CK LV  P  IN +K+L+ LN  GC   +      G +E+L +L ++  AI   PSSI  
Sbjct: 121 CKKLVCFPCIIN-MKALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGH 179

Query: 95  MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
           +  L  L  + C    S     LP                  S+  L SL  L LS C  
Sbjct: 180 LTGLVLLDLKWCKNLKS-----LP-----------------TSICKLKSLEYLFLSGCSK 217

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
            E + P  + N+ +LK L L       LP+SI  L  L  L L  CK L
Sbjct: 218 LE-SFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNL 265



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 14/133 (10%)

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
           P +  + +L  L+ S C  G    P+  GN+ +L  LYL+      LP+SI  L  L  L
Sbjct: 128 PCIINMKALQILNFSGCS-GLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLL 186

Query: 196 KLEDCKRLQSLPQLP---PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK 252
            L+ CK L+SLP       ++E + ++GC+ L          +S   +++ +D+LK L  
Sbjct: 187 DLKWCKNLKSLPTSICKLKSLEYLFLSGCSKL----------ESFPEMMENMDNLKELLL 236

Query: 253 NGLAISMLREFLE 265
           +G  I +L   +E
Sbjct: 237 DGTPIEVLPSSIE 249


>gi|15242300|ref|NP_199319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758979|dbj|BAB09489.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007813|gb|AED95196.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1165

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 29/311 (9%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           L +L L+GC +L  L  ++N L SLKTL L  C  F+   E     E+L+ L + GT+I 
Sbjct: 685 LQRLNLEGCTSLESL-RDVN-LTSLKTLTLSNCSNFK---EFPLIPENLKALYLDGTSIS 739

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             P ++  +K L  L+ + C    +  +C        +     L  L+L   S L    +
Sbjct: 740 QLPDNVGNLKRLVLLNMKDCKVLETIPTC--------VSELKTLQKLVLSGCSKLKEFPE 791

Query: 147 LDLSDCG--LGEGAIPSDIGNLHSLKTLYLSKNN-FVTLPASINCLFNLEKLKLEDCKRL 203
           ++ S     L +G     +  L S++ L LS+N+  + LPA IN +  L +L L+ C +L
Sbjct: 792 INKSSLKILLLDGTSIKTMPQLPSVQYLCLSRNDHLIYLPAGINQVSQLTRLDLKYCTKL 851

Query: 204 QSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT---IIDFVD--SLKLLGKNGLAIS 258
             +P+LPP ++ +  +GC+SL  +   L    S+       +F +  +L+   K  +   
Sbjct: 852 TYVPELPPTLQYLDAHGCSSLKNVAKPLARIMSTVQNHYTFNFTNCGNLEQAAKEEITSY 911

Query: 259 MLREFLEVVSAPSHK-------FSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVV 311
             R+   +  A  H        FS   PG E+P WF ++  GS +      +  +  ++ 
Sbjct: 912 AQRKCQLLSDARKHYNEGSEALFSTCFPGCEVPSWFGHEAVGSLLQRKLLPHWHD-KRLS 970

Query: 312 GYAACRVFHVP 322
           G A C V   P
Sbjct: 971 GIALCAVVSFP 981



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L+ L LD T I ++P ++  L  LV L +K CK L  +P+ ++ LK+L+ L L GC K
Sbjct: 726 ENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSK 785

Query: 62  FENLLETVGQVESLEELDISGTAIRCPP 89
            +   E      SL+ L + GT+I+  P
Sbjct: 786 LKEFPEI--NKSSLKILLLDGTSIKTMP 811


>gi|7635470|emb|CAB88530.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1220

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 28/211 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L +L L+ C +LV LPS+I  L SL+ L+L  C   E  L  +    
Sbjct: 727 LKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEK-LPAIENAT 784

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            L EL +   +++   P SI    NLK L+  GC     S+   LP              
Sbjct: 785 KLRELKLQNCSSLIELPLSIGTATNLKQLNISGC-----SSLVKLP-------------- 825

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
               S+  +  L   DLS+C      +PS IGNL +L  L +   +    LP +IN L +
Sbjct: 826 ---SSIGDITDLEVFDLSNCS-SLVTLPSSIGNLQNLCKLIMRGCSKLEALPININ-LKS 880

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           L+ L L DC +L+S P++  ++ ++R+ G A
Sbjct: 881 LDTLNLTDCSQLKSFPEISTHISELRLKGTA 911



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 38/243 (15%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + ++++P +IE  + L +L L+ C +L+ LP +I +  +LK LN+ GC     L  ++G 
Sbjct: 772  SSLEKLP-AIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGD 830

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            +  LE  D+S  +++   PSSI  ++NL  L  RGC+   +     LP  INL      L
Sbjct: 831  ITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEA-----LPININL----KSL 881

Query: 131  GALMLPSLSGLGSLTKLD--LSDCGLGEGAIPS--------------DIGNLHSL----- 169
              L L   S L S  ++   +S+  L   AI                 I    SL     
Sbjct: 882  DTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPH 941

Query: 170  -----KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
                   L+LSK +   +P  +  +  L  L L +C  L SLPQL  +++ +  + C SL
Sbjct: 942  AFDIITKLHLSK-DIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSL 1000

Query: 225  VTL 227
              L
Sbjct: 1001 ERL 1003



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 28/181 (15%)

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L E   Q+ +L+ +D+S ++      ++    NL+ L  R C     S+   LP      
Sbjct: 706 LWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNC-----SSLVELP------ 754

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLP 183
                       S+  L SL  LDL +C   E  +P+ I N   L+ L L   ++ + LP
Sbjct: 755 -----------SSIEKLTSLQILDLENCSSLE-KLPA-IENATKLRELKLQNCSSLIELP 801

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTLLGALKLRKSSCTI 240
            SI    NL++L +  C  L  LP    ++  + V   + C+SLVTL  ++   ++ C +
Sbjct: 802 LSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKL 861

Query: 241 I 241
           I
Sbjct: 862 I 862


>gi|30692151|ref|NP_190034.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644385|gb|AEE77906.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1194

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 28/211 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L +L L+ C +LV LPS+I  L SL+ L+L  C   E  L  +    
Sbjct: 727 LKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEK-LPAIENAT 784

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            L EL +   +++   P SI    NLK L+  GC     S+   LP              
Sbjct: 785 KLRELKLQNCSSLIELPLSIGTATNLKQLNISGC-----SSLVKLP-------------- 825

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
               S+  +  L   DLS+C      +PS IGNL +L  L +   +    LP +IN L +
Sbjct: 826 ---SSIGDITDLEVFDLSNCS-SLVTLPSSIGNLQNLCKLIMRGCSKLEALPININ-LKS 880

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           L+ L L DC +L+S P++  ++ ++R+ G A
Sbjct: 881 LDTLNLTDCSQLKSFPEISTHISELRLKGTA 911



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 38/243 (15%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + ++++P +IE  + L +L L+ C +L+ LP +I +  +LK LN+ GC     L  ++G 
Sbjct: 772  SSLEKLP-AIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGD 830

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
            +  LE  D+S  +++   PSSI  ++NL  L  RGC+   +     LP  INL      L
Sbjct: 831  ITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEA-----LPININL----KSL 881

Query: 131  GALMLPSLSGLGSLTKLD--LSDCGLGEGAIPS--------------DIGNLHSL----- 169
              L L   S L S  ++   +S+  L   AI                 I    SL     
Sbjct: 882  DTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPH 941

Query: 170  -----KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
                   L+LSK +   +P  +  +  L  L L +C  L SLPQL  +++ +  + C SL
Sbjct: 942  AFDIITKLHLSK-DIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSL 1000

Query: 225  VTL 227
              L
Sbjct: 1001 ERL 1003



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 28/181 (15%)

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L E   Q+ +L+ +D+S ++      ++    NL+ L  R C     S+   LP      
Sbjct: 706 LWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNC-----SSLVELP------ 754

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLP 183
                       S+  L SL  LDL +C   E  +P+ I N   L+ L L   ++ + LP
Sbjct: 755 -----------SSIEKLTSLQILDLENCSSLE-KLPA-IENATKLRELKLQNCSSLIELP 801

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTLLGALKLRKSSCTI 240
            SI    NL++L +  C  L  LP    ++  + V   + C+SLVTL  ++   ++ C +
Sbjct: 802 LSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKL 861

Query: 241 I 241
           I
Sbjct: 862 I 862


>gi|325925746|ref|ZP_08187119.1| putative Xanthomonas outer protein L [Xanthomonas perforans 91-118]
 gi|325543803|gb|EGD15213.1| putative Xanthomonas outer protein L [Xanthomonas perforans 91-118]
          Length = 660

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 41/224 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 228 LQHMTIDAAGLMELPDAMQQFAGLETLTL--ARNPIRSLPASIASLSRLRELSIRSCPEL 285

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T IR  P+SI  ++NLK+L  R C   P SA
Sbjct: 286 TELPEPLASTDASGEHQGLVNLQSLRLERTGIRSLPASIANLQNLKSLKIRNC---PLSA 342

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                           LG    P++  L  L +LDL  C       P   G    LK L 
Sbjct: 343 ----------------LG----PAIHHLPKLEELDLRGCTALRN-YPPIFGGRAPLKRLI 381

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP----QLPPN 212
           L   +N +TLP  I+ L  LEKL L  C  L  LP    QLP N
Sbjct: 382 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 425



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           L  L  + +   GL E  +P  +     L+TL L++N   +LPASI  L  L +L +  C
Sbjct: 225 LSHLQHMTIDAAGLME--LPDAMQQFAGLETLTLARNPIRSLPASIASLSRLRELSIRSC 282

Query: 201 KRLQSLPQ 208
             L  LP+
Sbjct: 283 PELTELPE 290


>gi|115435772|ref|NP_001042644.1| Os01g0260500 [Oryza sativa Japonica Group]
 gi|9558523|dbj|BAB03441.1| NBS-LRR disease resistance protein -like [Oryza sativa Japonica
           Group]
 gi|113532175|dbj|BAF04558.1| Os01g0260500 [Oryza sativa Japonica Group]
 gi|125569799|gb|EAZ11314.1| hypothetical protein OsJ_01178 [Oryza sativa Japonica Group]
          Length = 1292

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 117/261 (44%), Gaps = 38/261 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L  L L   +   +P SI  L  L  L L  C  LV LPS+I +L+SL  LNL GC 
Sbjct: 641 LENLEILNLSACNFHSLPDSIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGCG 700

Query: 61  KFENLLETVGQVESLEELDISG-------------------------TAIRCPPSSIFLM 95
             E L +T+  +++L  L++S                          T +   P+SI  +
Sbjct: 701 NLEILPDTICSLQNLHFLNLSRCGVLQALPKNIGNLSNLLHLNLSQCTDLESIPTSIGRI 760

Query: 96  KNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLS 150
           K+L  L    C+     P S    +    + ++  S    +L LP S S L +L  LDLS
Sbjct: 761 KSLHILDLSHCSSLSELPGSIGGLH---ELQILILSHHASSLALPVSTSHLPNLQTLDLS 817

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ- 208
              L    +P  IGNLHSLKTL L +  +   LP SI  L  LE L    C+ L  LP  
Sbjct: 818 -WNLSLEELPESIGNLHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDG 876

Query: 209 --LPPNVEKVRVNGCASLVTL 227
                N++ +R + C SL  L
Sbjct: 877 MTRITNLKHLRNDQCRSLKQL 897



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 27/218 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L  + I E+P S+  L  L  L L     +  LP+ I+SL +L+TL+L  C    
Sbjct: 574 LRVLDLRGSQIMELPQSVGKLKHLRYLDLSSSL-ISTLPNCISSLHNLQTLHLYNCINLN 632

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L  +V  +E+LE L++S       P SI  ++NL+ L+   C+           F + L
Sbjct: 633 VLPMSVCALENLEILNLSACNFHSLPDSIGHLQNLQDLNLSLCS-----------FLVTL 681

Query: 124 MRRSSDLGALMLPSLSGLGSLTK-------------LDLSDCGLGEGAIPSDIGNLHSLK 170
                 L +L L +L G G+L               L+LS CG+ + A+P +IGNL +L 
Sbjct: 682 PSSIGTLQSLHLLNLKGCGNLEILPDTICSLQNLHFLNLSRCGVLQ-ALPKNIGNLSNLL 740

Query: 171 TLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            L LS+  +  ++P SI  + +L  L L  C  L  LP
Sbjct: 741 HLNLSQCTDLESIPTSIGRIKSLHILDLSHCSSLSELP 778


>gi|6018730|emb|CAB57879.1| PopC protein [Ralstonia solanacearum]
          Length = 1024

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 32/212 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L++L +D + + ++P     L  L  ++L   K L  LP++I +L +LKTL+L    
Sbjct: 381 MSSLQKLTVDNSSLAKLPADFGALGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNP 439

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L  + GQ+  L+EL ++G  I   P S+    +L+TL+         +A   LP  
Sbjct: 440 KLGSLPASFGQLSGLQELTLNGNRIHELP-SMGGASSLQTLTVD------DTALAGLP-- 490

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NF 179
                  +D GAL         +L  L LS+  L E  +P++ GNLH+LKTL L  N   
Sbjct: 491 -------ADFGALR--------NLAHLSLSNTQLRE--LPANTGNLHALKTLSLQGNQQL 533

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            TLP+S+  L  LE+L L++     S+ +LPP
Sbjct: 534 ATLPSSLGYLSGLEELTLKNS----SVSELPP 561



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 95/215 (44%), Gaps = 24/215 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D+  +P ++E L  L  L+LKG KN   LP  +  L +L+ L L         L  VG  
Sbjct: 235 DLHALPATLENLFLLETLSLKGAKNFKALPDAVWRLPALQELKL--SETGLKSLPPVGGG 292

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFR---------GCNGPPSSASCYLPFPINL 123
            +L+ L I  + +   P+    +  L +LS           G    P+  S  L     L
Sbjct: 293 SALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 352

Query: 124 MRRSSDLGAL-----------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            R    LG +            LPS SG+ SL KL + +  L +  +P+D G L +L  +
Sbjct: 353 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAK--LPADFGALGNLAHV 410

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            LS      LPASI  LF L+ L L+D  +L SLP
Sbjct: 411 SLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLP 445



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   +  +P S   LSGL +LTL G + +  LPS +    SL+TL +        L  
Sbjct: 435 LQDNPKLGSLPASFGQLSGLQELTLNGNR-IHELPS-MGGASSLQTLTVDDT-ALAGLPA 491

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS--SASCYLPFPINLMR 125
             G + +L  L +S T +R  P++   +  LKTLS +G     +  S+  YL     L  
Sbjct: 492 DFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTL 551

Query: 126 RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG-NLHSLKTLYLSKNNFVTLPA 184
           ++S +  L  P +    +L  L + +  L   +IP+DIG     L  L LS      LP+
Sbjct: 552 KNSSVSEL--PPMGPGSALKTLTVENSPLT--SIPADIGIQCERLTQLSLSNTQLRALPS 607

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLP----PNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           SI  L NL+ L L++  RL+ L +       +V K+ ++GC  L  L        SS   
Sbjct: 608 SIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGL-------PSSIGK 660

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP 279
           +  + +L L G  GL+++ L   L +   P    +++ P
Sbjct: 661 LPKLRTLDLSGCTGLSMASLPRSLVL---PRDGLNVIFP 696



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 44/197 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L  L L  T ++E+P +   L  L  L+L+G + L  LPS++  L  L+ L L    
Sbjct: 496 LRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSS 555

Query: 57  ------------LGCFKFEN-----LLETVG-QVESLEELDISGTAIRCPPSSIFLMKNL 98
                       L     EN     +   +G Q E L +L +S T +R  PSSI  + NL
Sbjct: 556 VSELPPMGPGSALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSIGKLSNL 615

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
           K L+                     ++ ++ L  L    +  L S+ K+DLS C    G 
Sbjct: 616 KGLT---------------------LKNNARLELLSESGVRKLESVRKIDLSGCVRLTG- 653

Query: 159 IPSDIGNLHSLKTLYLS 175
           +PS IG L  L+TL LS
Sbjct: 654 LPSSIGKLPKLRTLDLS 670



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCF 60
           E L +L L  T ++ +P SI  LS L  LTLK    L  L  S +  L+S++ ++L GC 
Sbjct: 590 ERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCV 649

Query: 61  KFENLLETVGQVESLEELDISG 82
           +   L  ++G++  L  LD+SG
Sbjct: 650 RLTGLPSSIGKLPKLRTLDLSG 671



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           +  +++LE +D    A+     ++FL   L+TLS +G     +        P     + S
Sbjct: 223 IAHLKNLETVDCDLHALPATLENLFL---LETLSLKGAKNFKALPDAVWRLPALQELKLS 279

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           + G   LP + G  +L +L + D  L +  +P+   +L  L +L LS      L + I  
Sbjct: 280 ETGLKSLPPVGGGSALQRLTIEDSPLEQ--LPAGFADLDQLASLSLSNTKLEKLSSGIGQ 337

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
           L  L+ L L+D  +L+ LP+    VE++ + G
Sbjct: 338 LPALKSLSLQDNPKLERLPKSLGQVEELTLIG 369


>gi|27923042|dbj|BAC55934.1| PopC [Ralstonia solanacearum]
          Length = 1024

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 32/212 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L++L +D + + ++P     L  L  ++L   K L  LP++I +L +LKTL+L    
Sbjct: 381 MSSLQKLTVDNSSLAKLPADFGTLGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNP 439

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L  + GQ+  L+EL ++G  I   P S+    +L+TL+         +A   LP  
Sbjct: 440 KLGSLPASFGQLSGLQELTLNGNRIHELP-SMGGASSLQTLTVD------DTALAGLP-- 490

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NF 179
                  +D GAL         +L  L LS+  L E  +P++ GNLH+LKTL L  N   
Sbjct: 491 -------ADFGALR--------NLAHLSLSNTQLRE--LPANTGNLHALKTLSLQGNQQL 533

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            TLP+S+  L  LE+L L++     S+ +LPP
Sbjct: 534 ATLPSSLGYLSGLEELTLKNS----SVSELPP 561



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 24/215 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D+  +P ++E L  L  L+LKG KNL  LP  +  L +L+ L L         L  VG  
Sbjct: 235 DLHALPATLENLFLLETLSLKGAKNLKALPDAVWRLPALQELKL--SETGLKSLPPVGGG 292

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFR---------GCNGPPSSASCYLPFPINL 123
            +L+ L I  + +   P+    +  L +LS           G    P+  S  L     L
Sbjct: 293 SALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 352

Query: 124 MRRSSDLGAL-----------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            R    LG +            LPS SG+ SL KL + +  L +  +P+D G L +L  +
Sbjct: 353 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAK--LPADFGTLGNLAHV 410

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            LS      LPASI  LF L+ L L+D  +L SLP
Sbjct: 411 SLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLP 445



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCF 60
           E L +L L  T ++ +P SI  LS L  LTLK    L  L  S +  L+S++ ++L GC 
Sbjct: 590 ERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCV 649

Query: 61  KFENLLETVGQVESLEELDISG 82
           +   LL ++G++     LD+SG
Sbjct: 650 RLTGLLSSIGKLPKPRTLDLSG 671



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 44/197 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L  L L  T ++E+P +   L  L  L+L+G + L  LPS++  L  L+ L L    
Sbjct: 496 LRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSS 555

Query: 57  ------------LGCFKFENLLET-----VG-QVESLEELDISGTAIRCPPSSIFLMKNL 98
                       L     EN   T     +G Q E L +L +S T +R  PSSI  + NL
Sbjct: 556 VSELPPMGPGSALKTLTVENSPPTSIPADIGIQCERLTQLSLSNTQLRALPSSIGKLSNL 615

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
           K L+                     ++ ++ L  L    +  L S+ K+DLS C    G 
Sbjct: 616 KGLT---------------------LKNNARLELLSESGVRKLESVRKIDLSGCVRLTGL 654

Query: 159 IPSDIGNLHSLKTLYLS 175
           + S IG L   +TL LS
Sbjct: 655 L-SSIGKLPKPRTLDLS 670



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           K+++R+  +   LKSL    L     FE     +  +++LE +D    A+     ++FL 
Sbjct: 196 KSVLRMSGDSVHLKSLPVPELPDV-TFE-----IAHLKNLETVDCDLHALPATLENLFL- 248

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
             L+TLS +G     +        P     + S+ G   LP + G  +L +L + D  L 
Sbjct: 249 --LETLSLKGAKNLKALPDAVWRLPALQELKLSETGLKSLPPVGGGSALQRLTIEDSPLE 306

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           +  +P+   +L  L +L LS      L + I  L  L+ L L+D  +L+ LP+    VE+
Sbjct: 307 Q--LPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQVEE 364

Query: 216 VRVNG 220
           + + G
Sbjct: 365 LTLIG 369


>gi|17549096|ref|NP_522436.1| POPC protein [Ralstonia solanacearum GMI1000]
 gi|20139269|sp|Q9RBS2.2|POPC_RALSO RecName: Full=Protein PopC
          Length = 1024

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 32/212 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L++L +D + + ++P     L  L  ++L   K L  LP++I +L +LKTL+L    
Sbjct: 381 MSSLQKLTVDNSSLAKLPADFGALGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNP 439

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L  + GQ+  L+EL ++G  I   P S+    +L+TL+         +A   LP  
Sbjct: 440 KLGSLPASFGQLSGLQELTLNGNRIHELP-SMGGASSLQTLTVD------DTALAGLP-- 490

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NF 179
                  +D GAL         +L  L LS+  L E  +P++ GNLH+LKTL L  N   
Sbjct: 491 -------ADFGALR--------NLAHLSLSNTQLRE--LPANTGNLHALKTLSLQGNQQL 533

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            TLP+S+  L  LE+L L++     S+ +LPP
Sbjct: 534 ATLPSSLGYLSGLEELTLKNS----SVSELPP 561



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 95/215 (44%), Gaps = 24/215 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D+  +P ++E L  L  L+LKG KN   LP  +  L +L+ L L         L  VG  
Sbjct: 235 DLHALPATLENLFLLETLSLKGAKNFKALPDAVWRLPALQELKL--SETGLKSLPPVGGG 292

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFR---------GCNGPPSSASCYLPFPINL 123
            +L+ L I  + +   P+    +  L +LS           G    P+  S  L     L
Sbjct: 293 SALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 352

Query: 124 MRRSSDLGAL-----------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            R    LG +            LPS SG+ SL KL + +  L +  +P+D G L +L  +
Sbjct: 353 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAK--LPADFGALGNLAHV 410

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            LS      LPASI  LF L+ L L+D  +L SLP
Sbjct: 411 SLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLP 445



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   +  +P S   LSGL +LTL G + +  LPS +    SL+TL +        L  
Sbjct: 435 LQDNPKLGSLPASFGQLSGLQELTLNGNR-IHELPS-MGGASSLQTLTVDDT-ALAGLPA 491

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS--SASCYLPFPINLMR 125
             G + +L  L +S T +R  P++   +  LKTLS +G     +  S+  YL     L  
Sbjct: 492 DFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTL 551

Query: 126 RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG-NLHSLKTLYLSKNNFVTLPA 184
           ++S +  L  P +    +L  L + +  L   +IP+DIG     L  L LS      LP+
Sbjct: 552 KNSSVSEL--PPMGPGSALKTLTVENSPLT--SIPADIGIQCERLTQLSLSNTQLRALPS 607

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLP----PNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           SI  L NL+ L L++  RL+ L +       +V K+ ++GC  L  L        SS   
Sbjct: 608 SIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGL-------PSSIGK 660

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP 279
           +  + +L L G  GL+++ L   L +   P    +++ P
Sbjct: 661 LPKLRTLDLSGCTGLSMASLPRSLVL---PRDGLNVIFP 696



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 44/197 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L  L L  T ++E+P +   L  L  L+L+G + L  LPS++  L  L+ L L    
Sbjct: 496 LRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSS 555

Query: 57  ------------LGCFKFEN-----LLETVG-QVESLEELDISGTAIRCPPSSIFLMKNL 98
                       L     EN     +   +G Q E L +L +S T +R  PSSI  + NL
Sbjct: 556 VSELPPMGPGSALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSIGKLSNL 615

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
           K L+                     ++ ++ L  L    +  L S+ K+DLS C    G 
Sbjct: 616 KGLT---------------------LKNNARLELLSESGVRKLESVRKIDLSGCVRLTG- 653

Query: 159 IPSDIGNLHSLKTLYLS 175
           +PS IG L  L+TL LS
Sbjct: 654 LPSSIGKLPKLRTLDLS 670



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCF 60
           E L +L L  T ++ +P SI  LS L  LTLK    L  L  S +  L+S++ ++L GC 
Sbjct: 590 ERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCV 649

Query: 61  KFENLLETVGQVESLEELDISG 82
           +   L  ++G++  L  LD+SG
Sbjct: 650 RLTGLPSSIGKLPKLRTLDLSG 671



 Score = 44.7 bits (104), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           K+++R+  +   LKSL    L     FE     +  +++LE +D    A+     ++FL 
Sbjct: 196 KSVLRMSGDSVQLKSLPVPELPDV-TFE-----IAHLKNLETVDCDLHALPATLENLFL- 248

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
             L+TLS +G     +        P     + S+ G   LP + G  +L +L + D  L 
Sbjct: 249 --LETLSLKGAKNFKALPDAVWRLPALQELKLSETGLKSLPPVGGGSALQRLTIEDSPLE 306

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           +  +P+   +L  L +L LS      L + I  L  L+ L L+D  +L+ LP+    VE+
Sbjct: 307 Q--LPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQVEE 364

Query: 216 VRVNG 220
           + + G
Sbjct: 365 LTLIG 369


>gi|346725889|ref|YP_004852558.1| leucin rich protein [Xanthomonas axonopodis pv. citrumelo F1]
 gi|346650636|gb|AEO43260.1| leucin rich protein [Xanthomonas axonopodis pv. citrumelo F1]
          Length = 660

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 41/224 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ +++D   + E+P +++  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 228 LQHMMIDAAGLMELPDTMQQFAGLETLTL--ARNPLRALPASIASLSRLRELSIRACPEL 285

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T IR  P+SI  ++NLK+L  R C   P SA
Sbjct: 286 TELPELLASTDASGEHQGLVNLQSLRLERTGIRSLPASIANLQNLKSLKIRNC---PLSA 342

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                           LG    P++  L  L +LDL  C       P   GN   LK L 
Sbjct: 343 ----------------LG----PAIHHLPKLEELDLRGCTALRNYPPIFGGNA-PLKRLI 381

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP----QLPPN 212
           L   +N +TLP  I+ L  LEKL L  C  L  LP    QLP N
Sbjct: 382 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 425


>gi|295830829|gb|ADG39083.1| AT5G17680-like protein [Capsella grandiflora]
          Length = 183

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 26/172 (15%)

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS---ASCYLP 118
            + L E +G + +LE L  S T IR  P SI  +  L+ L+    +  P     ++C   
Sbjct: 28  IKELPENIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAIGNSSXTPEGLLHSAC--- 84

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
                            P LS    L  L LS+  + E  IP+ IGNL +L  L LS NN
Sbjct: 85  -----------------PPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNN 125

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
           F  +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 126 FKFVPASIKRLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 177


>gi|295830831|gb|ADG39084.1| AT5G17680-like protein [Capsella grandiflora]
 gi|295830835|gb|ADG39086.1| AT5G17680-like protein [Capsella grandiflora]
          Length = 183

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 85/169 (50%), Gaps = 20/169 (11%)

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            + L E +G + +LE L  S T IR  P SI  +  L+ L+           S Y P   
Sbjct: 28  IKELPENIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAI--------GNSSYTP--- 76

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                   L     P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  
Sbjct: 77  ------EGLLHSACPPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKF 128

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
           +PASI  L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 129 VPASIKRLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 177


>gi|219566965|dbj|BAH04996.1| type III effector protein [Ralstonia solanacearum]
          Length = 984

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 32/212 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L++L +D + + ++P     L  L  ++L   K L  LP++I +L +LKTL+L    
Sbjct: 341 MSSLQKLTVDNSSLAKLPADFGALGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNP 399

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L  + GQ+  L+EL ++G  I   P S+    +L+TL+         +A   LP  
Sbjct: 400 KLGSLPASFGQLSGLQELTLNGNRIHELP-SMGGASSLQTLTVD------DTALAGLP-- 450

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NF 179
                  +D GAL         +L  L LS+  L E  +P++ GNLH+LKTL L  N   
Sbjct: 451 -------ADFGALR--------NLAHLSLSNTQLRE--LPANTGNLHALKTLSLQGNQQL 493

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            TLP+S+  L  LE+L L++     S+ +LPP
Sbjct: 494 ATLPSSLGYLSGLEELTLKNS----SVSELPP 521



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 24/215 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D+  +P ++E L  L  L+LKG KNL  LP  +  L +L+ L L         L  VG  
Sbjct: 195 DLHALPATLENLFLLETLSLKGAKNLKALPDAVWRLPALQELKL--SETGLKSLPPVGGG 252

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFR---------GCNGPPSSASCYLPFPINL 123
            +L+ L I  + +   P+    +  L +LS           G    P+  S  L     L
Sbjct: 253 SALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 312

Query: 124 MRRSSDLGAL-----------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            R    LG +            LPS SG+ SL KL + +  L +  +P+D G L +L  +
Sbjct: 313 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAK--LPADFGALGNLAHV 370

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            LS      LPASI  LF L+ L L+D  +L SLP
Sbjct: 371 SLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLP 405



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   +  +P S   LSGL +LTL G + +  LPS +    SL+TL +        L  
Sbjct: 395 LQDNPKLGSLPASFGQLSGLQELTLNGNR-IHELPS-MGGASSLQTLTV-DDTALAGLPA 451

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS--SASCYLPFPINLMR 125
             G + +L  L +S T +R  P++   +  LKTLS +G     +  S+  YL     L  
Sbjct: 452 DFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTL 511

Query: 126 RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG-NLHSLKTLYLSKNNFVTLPA 184
           ++S +  L  P +    +L  L + +  L   +IP+DIG     L  L LS      LP+
Sbjct: 512 KNSSVSEL--PPMGPGSALKTLTVENSPLT--SIPADIGIQCERLTQLSLSNTQLRALPS 567

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLP----PNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           SI  L NL+ L L++  RL+ L +       +V K+ ++GC  L  L        SS   
Sbjct: 568 SIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGL-------PSSIGK 620

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP 279
           +  + +L L G  GL+++ L   L +   P    +++ P
Sbjct: 621 LPKLRTLDLSGCTGLSMASLPRSLVL---PRDGLNVIFP 656



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 44/197 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L  L L  T ++E+P +   L  L  L+L+G + L  LPS++  L  L+ L L    
Sbjct: 456 LRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSS 515

Query: 57  ------------LGCFKFEN-----LLETVG-QVESLEELDISGTAIRCPPSSIFLMKNL 98
                       L     EN     +   +G Q E L +L +S T +R  PSSI  + NL
Sbjct: 516 VSELPPMGPGSALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSIGKLSNL 575

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
           K L+                     ++ ++ L  L    +  L S+ K+DLS C    G 
Sbjct: 576 KGLT---------------------LKNNARLELLSESGVRKLESVRKIDLSGCVRLTG- 613

Query: 159 IPSDIGNLHSLKTLYLS 175
           +PS IG L  L+TL LS
Sbjct: 614 LPSSIGKLPKLRTLDLS 630



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCF 60
           E L +L L  T ++ +P SI  LS L  LTLK    L  L  S +  L+S++ ++L GC 
Sbjct: 550 ERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCV 609

Query: 61  KFENLLETVGQVESLEELDISG 82
           +   L  ++G++  L  LD+SG
Sbjct: 610 RLTGLPSSIGKLPKLRTLDLSG 631



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           K+++R+  +   LKSL    L     FE     +  +++LE +D    A+     ++FL 
Sbjct: 156 KSVLRMSGDSVQLKSLPVPELPDV-TFE-----IAHLKNLETVDCDLHALPATLENLFL- 208

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
             L+TLS +G     +        P     + S+ G   LP + G  +L +L + D  L 
Sbjct: 209 --LETLSLKGAKNLKALPDAVWRLPALQELKLSETGLKSLPPVGGGSALQRLTIEDSPLE 266

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           +  +P+   +L  L +L LS      L + I  L  L+ L L+D  +L+ LP+    VE+
Sbjct: 267 Q--LPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQVEE 324

Query: 216 VRVNG 220
           + + G
Sbjct: 325 LTLIG 329


>gi|295830837|gb|ADG39087.1| AT5G17680-like protein [Neslia paniculata]
          Length = 183

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 84/167 (50%), Gaps = 20/167 (11%)

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E +G + +LE L  S TAIR  P SI  +  L+ L+           S Y P        
Sbjct: 33  ENIGNLVALEVLQASRTAIRRAPWSIARLARLQVLAI--------GNSFYTP-------- 76

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
              L     P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PASI
Sbjct: 77  -EGLLHSPYPPLSRFDDLRVLSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFEFIPASI 133

Query: 187 NCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLGALK 232
             L  L +L L +C+RLQ+LP +LP  +  + ++ C SLV++ G+  
Sbjct: 134 KRLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGSFN 180


>gi|95108210|emb|CAD18026.2| type III effector protein popc [Ralstonia solanacearum GMI1000]
          Length = 984

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 32/212 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L++L +D + + ++P     L  L  ++L   K L  LP++I +L +LKTL+L    
Sbjct: 341 MSSLQKLTVDNSSLAKLPADFGALGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNP 399

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L  + GQ+  L+EL ++G  I   P S+    +L+TL+         +A   LP  
Sbjct: 400 KLGSLPASFGQLSGLQELTLNGNRIHELP-SMGGASSLQTLTVD------DTALAGLP-- 450

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NF 179
                  +D GAL         +L  L LS+  L E  +P++ GNLH+LKTL L  N   
Sbjct: 451 -------ADFGALR--------NLAHLSLSNTQLRE--LPANTGNLHALKTLSLQGNQQL 493

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            TLP+S+  L  LE+L L++     S+ +LPP
Sbjct: 494 ATLPSSLGYLSGLEELTLKNS----SVSELPP 521



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 95/215 (44%), Gaps = 24/215 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D+  +P ++E L  L  L+LKG KN   LP  +  L +L+ L L         L  VG  
Sbjct: 195 DLHALPATLENLFLLETLSLKGAKNFKALPDAVWRLPALQELKL--SETGLKSLPPVGGG 252

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFR---------GCNGPPSSASCYLPFPINL 123
            +L+ L I  + +   P+    +  L +LS           G    P+  S  L     L
Sbjct: 253 SALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 312

Query: 124 MRRSSDLGAL-----------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            R    LG +            LPS SG+ SL KL + +  L +  +P+D G L +L  +
Sbjct: 313 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAK--LPADFGALGNLAHV 370

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            LS      LPASI  LF L+ L L+D  +L SLP
Sbjct: 371 SLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLP 405



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   +  +P S   LSGL +LTL G + +  LPS +    SL+TL +        L  
Sbjct: 395 LQDNPKLGSLPASFGQLSGLQELTLNGNR-IHELPS-MGGASSLQTLTV-DDTALAGLPA 451

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS--SASCYLPFPINLMR 125
             G + +L  L +S T +R  P++   +  LKTLS +G     +  S+  YL     L  
Sbjct: 452 DFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTL 511

Query: 126 RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG-NLHSLKTLYLSKNNFVTLPA 184
           ++S +  L  P +    +L  L + +  L   +IP+DIG     L  L LS      LP+
Sbjct: 512 KNSSVSEL--PPMGPGSALKTLTVENSPLT--SIPADIGIQCERLTQLSLSNTQLRALPS 567

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLP----PNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           SI  L NL+ L L++  RL+ L +       +V K+ ++GC  L  L        SS   
Sbjct: 568 SIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGL-------PSSIGK 620

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP 279
           +  + +L L G  GL+++ L   L +   P    +++ P
Sbjct: 621 LPKLRTLDLSGCTGLSMASLPRSLVL---PRDGLNVIFP 656



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 44/197 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L  L L  T ++E+P +   L  L  L+L+G + L  LPS++  L  L+ L L    
Sbjct: 456 LRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSS 515

Query: 57  ------------LGCFKFEN-----LLETVG-QVESLEELDISGTAIRCPPSSIFLMKNL 98
                       L     EN     +   +G Q E L +L +S T +R  PSSI  + NL
Sbjct: 516 VSELPPMGPGSALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSIGKLSNL 575

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
           K L+                     ++ ++ L  L    +  L S+ K+DLS C    G 
Sbjct: 576 KGLT---------------------LKNNARLELLSESGVRKLESVRKIDLSGCVRLTG- 613

Query: 159 IPSDIGNLHSLKTLYLS 175
           +PS IG L  L+TL LS
Sbjct: 614 LPSSIGKLPKLRTLDLS 630



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCF 60
           E L +L L  T ++ +P SI  LS L  LTLK    L  L  S +  L+S++ ++L GC 
Sbjct: 550 ERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCV 609

Query: 61  KFENLLETVGQVESLEELDISG 82
           +   L  ++G++  L  LD+SG
Sbjct: 610 RLTGLPSSIGKLPKLRTLDLSG 631



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           K+++R+  +   LKSL    L     FE     +  +++LE +D    A+     ++FL 
Sbjct: 156 KSVLRMSGDSVQLKSLPVPELPDV-TFE-----IAHLKNLETVDCDLHALPATLENLFL- 208

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
             L+TLS +G     +        P     + S+ G   LP + G  +L +L + D  L 
Sbjct: 209 --LETLSLKGAKNFKALPDAVWRLPALQELKLSETGLKSLPPVGGGSALQRLTIEDSPLE 266

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           +  +P+   +L  L +L LS      L + I  L  L+ L L+D  +L+ LP+    VE+
Sbjct: 267 Q--LPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQVEE 324

Query: 216 VRVNG 220
           + + G
Sbjct: 325 LTLIG 329


>gi|402479186|gb|AFQ55835.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 12/176 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P S+  L  L+QL L+ C NL +   +++ LK L+ L L GC     L E +G +  L
Sbjct: 13  KVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCL 72

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL----- 130
           +EL + GTAI+  P SI+ ++NL+ LS +GC          LP  I  +    +L     
Sbjct: 73  KELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKE-----LPLCIGTLTSLEELYLDGT 127

Query: 131 GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
           G   LP S+  L SL KL L  C      IP  I  L SLK L+L+ +    LP S
Sbjct: 128 GLQTLPNSIGYLKSLQKLHLMHCA-SLSKIPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 23/114 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN----------------------- 37
           M CL+ELLLD T IK +P SI  L  L +L+LKGC++                       
Sbjct: 69  MPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDGTG 128

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           L  LP++I  LKSL+ L+L+ C     + +T+ +++SL+EL ++G+A+   P S
Sbjct: 129 LQTLPNSIGYLKSLQKLHLMHCASLSKIPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           +R  S+L   ++  +SGL  L KL LS C      +P +IG +  LK L L       LP
Sbjct: 29  LRNCSNLSKFLV-DVSGLKRLEKLFLSGCS-NLSVLPENIGAMPCLKELLLDGTAIKNLP 86

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI  L NLEKL L+ C+ ++ LP
Sbjct: 87  ESIYRLENLEKLSLKGCRSIKELP 110


>gi|240256006|ref|NP_193640.4| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana]
 gi|334302784|sp|P0CB16.2|DRL25_ARATH RecName: Full=Putative disease resistance protein At4g19050
 gi|332658734|gb|AEE84134.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana]
          Length = 1201

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 27/223 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L + KT + E+  +I  +  L +L L+ C  +  LPS I  L  L+  ++ GC K +
Sbjct: 681 LRILDMSKTSLPELADTIADVVNLNKLLLRNCSLIEELPS-IEKLTHLEVFDVSGCIKLK 739

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
           N+  + G++  L E+++S T +   P  I  + NLK L  R C+   +            
Sbjct: 740 NINGSFGEMSYLHEVNLSETNLSELPDKISELSNLKELIIRKCSKLKT------------ 787

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                      LP+L  L +L   D+S C   E  I     NL  L  + LS+ N   LP
Sbjct: 788 -----------LPNLEKLTNLEIFDVSGCTELE-TIEGSFENLSCLHKVNLSETNLGELP 835

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV--RVNGCASL 224
             I+ L NL++L L +C +L++LP L      V   V+GC +L
Sbjct: 836 NKISELSNLKELILRNCSKLKALPNLEKLTHLVIFDVSGCTNL 878



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 25/183 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L E+ L +T++ E+P  I  LS L +L ++ C  L  LP N+  L +L+  ++ GC 
Sbjct: 748 MSYLHEVNLSETNLSELPDKISELSNLKELIIRKCSKLKTLP-NLEKLTNLEIFDVSGCT 806

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + E +  +   +  L ++++S T +   P+ I  + NLK L  R C              
Sbjct: 807 ELETIEGSFENLSCLHKVNLSETNLGELPNKISELSNLKELILRNC-------------- 852

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  S L A  LP+L  L  L   D+S C      I     ++  L  + LS  N  
Sbjct: 853 -------SKLKA--LPNLEKLTHLVIFDVSGCT-NLDKIEESFESMSYLCEVNLSGTNLK 902

Query: 181 TLP 183
           T P
Sbjct: 903 TFP 905



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 108/266 (40%), Gaps = 46/266 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L  ++L +    E+ LS+  L  L  L ++ C +L+     ++ L+ L  L + G  
Sbjct: 444 MQDLEVVVLFEPTFHELVLSLSKLKKLRVLVIRDC-DLIDNIDKLSGLQGLHVLEVSGAS 502

Query: 61  KFENLLETV-GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
              N+ +     +  L+ L++SG AI+  PS+I  +  L+    R C     S    LP 
Sbjct: 503 SLVNIPDDFFKNMTQLQSLNLSGLAIKSSPSTIEKLSMLRCFILRHC-----SELQDLPN 557

Query: 120 PINLMRRSSDL---GALMLPS-----------------LSGLGSLTKLDLSDCGLGEGAI 159
            I   R+   +   GA  L S                  + L  L  LD S+  +    I
Sbjct: 558 FIVETRKLEVIDIHGARKLESYFDRVKDWKDYKGKNKNFAQLQLLEHLDFSETKIIRLPI 617

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP--NVEKVR 217
                  H    L  S N+F T+P        L +L L +C RL+ LPQL P  N++ + 
Sbjct: 618 ------FH----LKDSTNDFSTMPI-------LTRLLLRNCTRLKRLPQLRPLTNLQILD 660

Query: 218 VNGCASLVTLLGALKLRKSSCTIIDF 243
             G   LV +L      K    I+D 
Sbjct: 661 ACGATDLVEMLEVCLEEKKELRILDM 686


>gi|402479150|gb|AFQ55817.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479152|gb|AFQ55818.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479154|gb|AFQ55819.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479156|gb|AFQ55820.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479160|gb|AFQ55822.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479162|gb|AFQ55823.1| disease resistance protein, partial [Capsella rubella]
 gi|402479164|gb|AFQ55824.1| disease resistance protein, partial [Capsella rubella]
 gi|402479166|gb|AFQ55825.1| disease resistance protein, partial [Capsella rubella]
 gi|402479168|gb|AFQ55826.1| disease resistance protein, partial [Capsella rubella]
 gi|402479170|gb|AFQ55827.1| disease resistance protein, partial [Capsella rubella]
 gi|402479172|gb|AFQ55828.1| disease resistance protein, partial [Capsella rubella]
 gi|402479174|gb|AFQ55829.1| disease resistance protein, partial [Capsella rubella]
 gi|402479176|gb|AFQ55830.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479178|gb|AFQ55831.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479180|gb|AFQ55832.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479182|gb|AFQ55833.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479184|gb|AFQ55834.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 12/176 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P S+  L  L+QL L+ C NL +   +++ LK L+ L L GC     L E +G +  L
Sbjct: 13  KVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCL 72

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL----- 130
           +EL + GTAI+  P SI+ ++NL+ LS +GC          LP  I  +    +L     
Sbjct: 73  KELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKE-----LPLCIGTLTSLEELYLDGT 127

Query: 131 GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
           G   LP S+  L SL KL L  C      IP  I  L SLK L+L+ +    LP S
Sbjct: 128 GLQTLPNSIGYLKSLQKLHLMHCA-SLSKIPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 23/114 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN----------------------- 37
           M CL+ELLLD T IK +P SI  L  L +L+LKGC++                       
Sbjct: 69  MPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDGTG 128

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           L  LP++I  LKSL+ L+L+ C     + +T+ +++SL+EL ++G+A+   P S
Sbjct: 129 LQTLPNSIGYLKSLQKLHLMHCASLSKIPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           +R  S+L   ++  +SGL  L KL LS C      +P +IG +  LK L L       LP
Sbjct: 29  LRNCSNLSKFLV-DVSGLKRLEKLFLSGCS-NLSVLPENIGAMPCLKELLLDGTAIKNLP 86

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI  L NLEKL L+ C+ ++ LP
Sbjct: 87  ESIYRLENLEKLSLKGCRSIKELP 110


>gi|110741833|dbj|BAE98859.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 660

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 34/308 (11%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 191 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 249

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 250 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 309

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 310 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 368

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL--------V 225
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL        +
Sbjct: 369 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL 428

Query: 226 TLLGALKLRKSSCTI----IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF--SIVVP 279
           T+L  L L   +  +    ++ + +LK L   G   +      + +S  S K   ++ +P
Sbjct: 429 TILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLP 488

Query: 280 GSEIPKWF 287
           G+ +P WF
Sbjct: 489 GNRVPDWF 496



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 13/179 (7%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
           C  L     +++ LK L+ L L GC     L E +G + SL+EL + GTAI+  P SI  
Sbjct: 3   CSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINR 62

Query: 95  MKNLKTLSFRGCNGPPSSASCYLPFPINLMRR-----SSDLGALMLPSLSG-LGSLTKLD 148
           ++NL+ LS RGC          LP  I  ++        D     LPS  G L +L  L 
Sbjct: 63  LQNLEILSLRGCKIQ------ELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLH 116

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           L  C      IP  I  L SLK L+++ +    LP   + L +L      DCK L+ +P
Sbjct: 117 LVRCT-SLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 174



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 28  SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 85

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 86  LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 140

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 141 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 199

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 200 IGALHFIRELELRNCKFLKFLPK 222



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 86  LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 145

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 146 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 205

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 206 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 261

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 262 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 305


>gi|226237535|dbj|BAH47282.1| type III effector protein [Ralstonia solanacearum]
          Length = 984

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 32/212 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L++L +D + + ++P     L  L  ++L   K L  LP++I +L +LKTL+L    
Sbjct: 341 MSSLQKLTVDNSSLAKLPADFGALGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNP 399

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L  + GQ+  L+EL ++G  I   P S+    +L+TL+         +A   LP  
Sbjct: 400 KLGSLPASFGQLSGLQELTLNGNRIHELP-SMGGASSLQTLTVD------DTALAGLP-- 450

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NF 179
                  +D GAL         +L  L LS+  L E  +P++ GNLH+LKTL L  N   
Sbjct: 451 -------ADFGALR--------NLAHLSLSNTQLRE--LPANTGNLHALKTLSLQGNQQL 493

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            TLP+S+  L  LE+L L++     S+ +LPP
Sbjct: 494 ATLPSSLGYLSGLEELTLKNS----SVSELPP 521



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 24/215 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D+  +P ++E L  L  L+LKG KNL  LP  +  L +L+ L L         L  VG  
Sbjct: 195 DLHALPATLENLFLLETLSLKGAKNLKALPDAVWRLPALQELKL--SETGLKSLPPVGGG 252

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFR---------GCNGPPSSASCYLPFPINL 123
            +L+ L I  + +   P+    +  L +LS           G    P+  S  L     L
Sbjct: 253 SALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 312

Query: 124 MRRSSDLGAL-----------MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            R    LG +            LPS SG+ SL KL + +  L +  +P+D G L +L  +
Sbjct: 313 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAK--LPADFGALGNLAHV 370

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            LS      LPASI  LF L+ L L+D  +L SLP
Sbjct: 371 SLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLP 405



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D   +  +P S   LSGL +LTL G + +  LPS +    SL+TL +        L  
Sbjct: 395 LQDNPKLGSLPASFGQLSGLQELTLNGNR-IHELPS-MGGASSLQTLTV-DDTALAGLPA 451

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS--SASCYLPFPINLMR 125
             G + +L  L +S T +R  P++   +  LKTLS +G     +  S+  YL     L  
Sbjct: 452 DFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTL 511

Query: 126 RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG-NLHSLKTLYLSKNNFVTLPA 184
           ++S +  L  P +    +L  L + +  L   +IP+DIG     L  L LS      LP+
Sbjct: 512 KNSSVSEL--PPMGPGSALKTLTVENSPLT--SIPADIGIQCERLTQLSLSNTQLRALPS 567

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLP----PNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
           SI  L NL+ L L++  RL+ L +       +V K+ ++GC  L  L        SS   
Sbjct: 568 SIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGL-------PSSIGN 620

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVP 279
           +  + +L L G  GL+++ L   L +   P    +++ P
Sbjct: 621 LPKLRTLDLSGCTGLSMASLPRSLVL---PRDGLNVIFP 656



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 44/197 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L  L L  T ++E+P +   L  L  L+L+G + L  LPS++  L  L+ L L    
Sbjct: 456 LRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSS 515

Query: 57  ------------LGCFKFEN-----LLETVG-QVESLEELDISGTAIRCPPSSIFLMKNL 98
                       L     EN     +   +G Q E L +L +S T +R  PSSI  + NL
Sbjct: 516 VSELPPMGPGSALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSIGKLSNL 575

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
           K L+                     ++ ++ L  L    +  L S+ K+DLS C    G 
Sbjct: 576 KGLT---------------------LKNNARLELLSESGVRKLESVRKIDLSGCVRLTG- 613

Query: 159 IPSDIGNLHSLKTLYLS 175
           +PS IGNL  L+TL LS
Sbjct: 614 LPSSIGNLPKLRTLDLS 630



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCF 60
           E L +L L  T ++ +P SI  LS L  LTLK    L  L  S +  L+S++ ++L GC 
Sbjct: 550 ERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCV 609

Query: 61  KFENLLETVGQVESLEELDISG 82
           +   L  ++G +  L  LD+SG
Sbjct: 610 RLTGLPSSIGNLPKLRTLDLSG 631



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           K+++R+  +   LKSL    L     FE     +  +++LE +D    A+     ++FL 
Sbjct: 156 KSVLRMSGDSVQLKSLPVPELPDV-TFE-----IAHLKNLETVDCDLHALPATLENLFL- 208

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
             L+TLS +G     +        P     + S+ G   LP + G  +L +L + D  L 
Sbjct: 209 --LETLSLKGAKNLKALPDAVWRLPALQELKLSETGLKSLPPVGGGSALQRLTIEDSPLE 266

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           +  +P+   +L  L +L LS      L + I  L  L+ L L+D  +L+ LP+    VE+
Sbjct: 267 Q--LPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQVEE 324

Query: 216 VRVNG 220
           + + G
Sbjct: 325 LTLIG 329


>gi|105922810|gb|ABF81438.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1524

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 53/79 (67%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL LD T I E+  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 810 MNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS 869

Query: 61  KFENLLETVGQVESLEELD 79
           + +N+ E +G+VESLEE D
Sbjct: 870 ELKNIPENLGKVESLEEFD 888



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +LPS   + SL    L  C   E   P  +GN++ L  L L       L +SI+ L  LE
Sbjct: 779 ILPSNLEMESLKVFTLDGCTKLE-KFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLE 837

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
            L + +CK L+S+P              +S+  L    KL  S C+       LK + +N
Sbjct: 838 VLSMNNCKNLESIP--------------SSIGCLKSLKKLDLSGCS------ELKNIPEN 877

Query: 254 GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
              +  L EF + +S P   F I  PG+EIP WF ++
Sbjct: 878 LGKVESLEEF-DGLSNPRPGFGIAFPGNEIPGWFNHR 913



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 70/162 (43%), Gaps = 30/162 (18%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     L  + L  CK+   LPSN+  ++SLK   L GC K E   + VG 
Sbjct: 751 TSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKLEKFPDIVGN 809

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSS 128
           +  L EL + GT I    SSI  +  L+ LS   C      PSS  C             
Sbjct: 810 MNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGC------------- 856

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                       L SL KLDLS C   +  IP ++G + SL+
Sbjct: 857 ------------LKSLKKLDLSGCSELKN-IPENLGKVESLE 885


>gi|224165258|ref|XP_002338793.1| predicted protein [Populus trichocarpa]
 gi|222873469|gb|EEF10600.1| predicted protein [Populus trichocarpa]
          Length = 262

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 107/231 (46%), Gaps = 30/231 (12%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           +  L  L+L+    + ++  S+  L  LV L LKGC  L  LP +I  LKSL+T+NL  C
Sbjct: 18  LPSLERLILENCGSLADIHQSVGELKKLVFLNLKGCYGLQNLPESICELKSLETMNLQSC 77

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN-GPPSSASCYLP 118
              + L E +G ++ L +L +  T ++  PSS  ++K LK L  RG   G       Y P
Sbjct: 78  PSLKKLPEKLGNMQVLTDLLLDETGVQNLPSSTGILKKLKKLLVRGSGLGFGLEVQRYRP 137

Query: 119 FPINLMRRSS----------------DLGA------------LMLPSLSGLGSLTKLDLS 150
              +   R S                D  A             + PS SGL SLT LD+S
Sbjct: 138 QASSFYSRQSRRLEAQLQRQEAFPSLDSNAFHSKELALKQQPFLPPSFSGLSSLTTLDIS 197

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           +  L    I  ++G+L SL+ L L+ N+F  LPA    L  LEKL L   K
Sbjct: 198 NRYLSNNDISINLGSLSSLQDLNLAGNHFSELPAGTGHLAKLEKLDLSRFK 248


>gi|147863085|emb|CAN78783.1| hypothetical protein VITISV_038766 [Vitis vinifera]
          Length = 439

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 176/448 (39%), Gaps = 90/448 (20%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ-VESLEEL 78
           SI  L  L  L L+GCKNL  LPS++  L SLKT +L  C   E   E  G  +++L  L
Sbjct: 21  SIGDLKNLTSLNLRGCKNLTSLPSSLQYLDSLKTFHLDYCSNLEEFPEMKGSPMKALSYL 80

Query: 79  DISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSL 138
            + G  I+  PSSI L+  L+ L    C    S        P ++ R  S LG L L   
Sbjct: 81  HLGGCGIKELPSSIELLTELQCLYLSNCKNLRS-------LPSSICRLKS-LGILSLDDC 132

Query: 139 SGLGSLTK----------LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           S L +  +          LDL   G+G   +PS   NL SL+ L +S N  VTLP SI  
Sbjct: 133 SNLDTFPEITEDMKYLGILDLR--GIGIKELPSS-QNLKSLRRLDIS-NCLVTLPDSIYN 188

Query: 189 LFNLEKLKLED-CKRLQSLPQLPPN---VEKVRVNGCASLVTLLGAL----KLRKSSCTI 240
           L +LE L L   C  L+  P+ P     +E++ ++ C  +V +        KLR      
Sbjct: 189 LRSLEDLTLRGCCSNLEKFPKNPEGFCYLERLDLSHCNVMVGIPSGFSQLCKLR-----Y 243

Query: 241 IDFVDSLKLLGKNGLAISMLREFL------------------------------EVVSAP 270
           +D     KLL    L  S LRE                                E ++  
Sbjct: 244 LDISHCKKLLDIPDLP-SSLREIDAHYCTKLEMLSSPSSLLWSSLLKWFNPTSNEHLNCK 302

Query: 271 SHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF-HVPKHSTGIR 329
             K  ++  G  IP W  +Q  GS + +  P      +  +G+A   ++ + P  S    
Sbjct: 303 EGKMILINGG--IPGWVFHQEIGSQVRIEPPPNWYEDDHFLGFAFFTLYSYCPSPSQFSL 360

Query: 330 RFYRYPHP-----AHVLHCSMDEKFGHRGSDHLWLLYLPRQS----YYCNVKWHFESNHF 380
           R    P       A    C  D  F     D L +    + +    Y+    WHF+++  
Sbjct: 361 RLRGDPDEVVDDRATPYWCPCD-IFNIDAPDRLLVTLYHKNAIPNKYHRQQPWHFQADFV 419

Query: 381 RLSFMDEREKHCPAGSGTGLKVKRCGFH 408
             +  + R+ H          +KRCG  
Sbjct: 420 PRN--NRRDTH--------TNIKRCGVQ 437



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 99/224 (44%), Gaps = 28/224 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L  L L    IKE+P SIELL+ L  L L  CKNL  LPS+I  LKSL  L+L  C 
Sbjct: 74  MKALSYLHLGGCGIKELPSSIELLTELQCLYLSNCKNLRSLPSSICRLKSLGILSLDDCS 133

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +   E    ++ L  LD+ G  I+  PSS  L K+L+ L    C              
Sbjct: 134 NLDTFPEITEDMKYLGILDLRGIGIKELPSSQNL-KSLRRLDISNC-------------- 178

Query: 121 INLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NN 178
                       + LP S+  L SL  L L  C       P +      L+ L LS  N 
Sbjct: 179 -----------LVTLPDSIYNLRSLEDLTLRGCCSNLEKFPKNPEGFCYLERLDLSHCNV 227

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
            V +P+  + L  L  L +  CK+L  +P LP ++ ++  + C 
Sbjct: 228 MVGIPSGFSQLCKLRYLDISHCKKLLDIPDLPSSLREIDAHYCT 271


>gi|109676360|gb|ABG37662.1| NBS-LRR type disease resistance-like protein [Populus trichocarpa]
          Length = 1138

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 53/79 (67%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL EL LD T I E+  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 356 MNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS 415

Query: 61  KFENLLETVGQVESLEELD 79
           + +N+ E +G+VESLEE D
Sbjct: 416 ELKNIPENLGKVESLEEFD 434



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +LPS   + SL    L  C   E   P  +GN++ L  L L       L +SI+ L  LE
Sbjct: 325 ILPSNLEMESLKVFTLDGCTKLE-KFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLE 383

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
            L + +CK L+S+P              +S+  L    KL  S C+       LK + +N
Sbjct: 384 VLSMNNCKNLESIP--------------SSIGCLKSLKKLDLSGCS------ELKNIPEN 423

Query: 254 GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
              +  L EF + +S P   F I  PG+EIP WF ++
Sbjct: 424 LGKVESLEEF-DGLSNPRPGFGIAFPGNEIPGWFNHR 459



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 70/162 (43%), Gaps = 30/162 (18%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     L  + L  CK+   LPSN+  ++SLK   L GC K E   + VG 
Sbjct: 297 TSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKLEKFPDIVGN 355

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSS 128
           +  L EL + GT I    SSI  +  L+ LS   C      PSS  C             
Sbjct: 356 MNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGC------------- 402

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                       L SL KLDLS C   +  IP ++G + SL+
Sbjct: 403 ------------LKSLKKLDLSGCSELKN-IPENLGKVESLE 431


>gi|147774169|emb|CAN63551.1| hypothetical protein VITISV_032106 [Vitis vinifera]
          Length = 924

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 108/216 (50%), Gaps = 31/216 (14%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L LD+T IKE+P SIELL GL  L L  CKNL  LP++I +L+ L+ L+L GC K +
Sbjct: 705 LEVLSLDETAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLD 764

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L E + ++  LE L ++  ++ C   S+  +  L+ L    CN  P             
Sbjct: 765 RLPEDLERMPCLEVLSLN--SLSCQLPSLSGLSLLRELYLDQCNLTPG------------ 810

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN----- 178
                     ++ S + L +L +L L +C L  G +   I +L SL+ L LS++N     
Sbjct: 811 ----------VIKSDNCLNALKELRLRNCNLN-GGVFHCIFHLSSLEVLDLSRSNPEEGG 859

Query: 179 -FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
               +   I+ L NL  L L  C +L  +P+LP ++
Sbjct: 860 TLSDILVGISQLSNLRALDLSHCMKLSQIPELPSSL 895


>gi|215261578|gb|ACJ64858.1| disease resistance protein RPP1-like protein R4 [Arabidopsis
            thaliana]
          Length = 1363

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 39/249 (15%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSL--KTLNLLGCFKFENL 65
            L++ + + E+P +IE  + L +L L+ C +L+ LP +I + ++L  K LN+ GC     L
Sbjct: 906  LINCSRVVELP-AIENATNLWELNLQNCSSLIELPLSIGTARNLFLKELNISGCSSLVKL 964

Query: 66   LETVGQVESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
              ++G + +LEE D+S  +     PSSI  ++NL  L  RGC+   +     LP  INL 
Sbjct: 965  PSSIGDMTNLEEFDLSNCSNLVELPSSIGNLQNLCELIMRGCSKLEA-----LPTNINL- 1018

Query: 125  RRSSDLGALMLPSLSGLGSLTKL--DLSDCGLGEGAIPS--------------DIGNLHS 168
                 L  L L   S L S  ++  ++S+  L   AI                 I    S
Sbjct: 1019 ---KSLYTLDLTDCSQLKSFPEISTNISELWLKGTAIKEVPLSIMSWSPLVDFQISYFES 1075

Query: 169  LKT----------LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            LK           L+LSK++   +P  +  +  L +L L +C  L SLPQLP ++  +  
Sbjct: 1076 LKEFPHALDIITGLWLSKSDIQEVPPWVKRMSRLRELTLNNCNNLVSLPQLPDSLAYLYA 1135

Query: 219  NGCASLVTL 227
            + C SL  L
Sbjct: 1136 DNCKSLERL 1144



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 19/225 (8%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L D  D+KE+P ++   + L +L L+ C +L+ LPS+I  L SL+ L+L  C     L  
Sbjct: 836  LSDSIDLKELP-NLSTATNLEELELRNCSSLMELPSSIEKLTSLQRLDLCDCSSLVKLPP 894

Query: 68   TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI----NL 123
            ++    +L EL +   +      +I    NL  L+ + C     S+   LP  I    NL
Sbjct: 895  SIN-ANNLWELSLINCSRVVELPAIENATNLWELNLQNC-----SSLIELPLSIGTARNL 948

Query: 124  MRRSSDLGA----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-N 177
              +  ++      + LPS  G + +L + DLS+C      +PS IGNL +L  L +   +
Sbjct: 949  FLKELNISGCSSLVKLPSSIGDMTNLEEFDLSNCS-NLVELPSSIGNLQNLCELIMRGCS 1007

Query: 178  NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
                LP +IN L +L  L L DC +L+S P++  N+ ++ + G A
Sbjct: 1008 KLEALPTNIN-LKSLYTLDLTDCSQLKSFPEISTNISELWLKGTA 1051



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSL-----KTLN 55
            ++ +  L L K+DI+E+P  ++ +S L +LTL  C NLV LP   +SL  L     K+L 
Sbjct: 1083 LDIITGLWLSKSDIQEVPPWVKRMSRLRELTLNNCNNLVSLPQLPDSLAYLYADNCKSLE 1142

Query: 56   LLGC 59
             L C
Sbjct: 1143 RLDC 1146


>gi|357499629|ref|XP_003620103.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
 gi|355495118|gb|AES76321.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
          Length = 1075

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 48/288 (16%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L+ L  L  +GC+ L   P     L SL+ L L  C++  N  E +G++E+LE + 
Sbjct: 673 SIGFLNKLKILNAEGCRKLKSFPPI--QLTSLELLRLSYCYRLRNFPEILGKMENLESIF 730

Query: 80  ISGTAIRCPPSSIFLMKNLKTL---SFRGCNGPPSSA------SCYLPFPINLMRRSSDL 130
           +  T+I+  P+S   +  L+ L    FR     PSS       S  L    +L+ +  D 
Sbjct: 731 LKETSIKELPNSFQNLSGLRNLLLDGFRMFLRLPSSILVMPKLSWVLVQGRHLLPKQCDK 790

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
            + M+ S     ++  L L +C L   ++P       ++  L LSK+N   LP  I  L 
Sbjct: 791 PSSMVSS-----NVKSLVLIECNLTGESLPIIFKWFANVTNLNLSKSNITILPECIKELR 845

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLL 250
           +LE+L L+ CK LQ +  +PPN++ +    C SL           SSC  +     L  +
Sbjct: 846 SLERLYLDCCKLLQEIRAIPPNLKFLSAINCESL----------SSSCRSMLLDQELHEV 895

Query: 251 GKNGLAISMLREFLEVVSAPSHKFSIVVPGS-EIPKWFMYQNEGSSIT 297
           G      +M R                +PG+  IP+WF +Q+    I+
Sbjct: 896 GD-----TMFR----------------LPGTLRIPRWFEHQSTRQPIS 922


>gi|297734814|emb|CBI17048.3| unnamed protein product [Vitis vinifera]
          Length = 872

 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 107/218 (49%), Gaps = 35/218 (16%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L EL LD+T IKE+P SIELL GL  L L  CKNL  LP++I +L+ L  L+L GC K +
Sbjct: 597 LEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLD 656

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP---SSASCYLPFP 120
            L E + ++  LE L ++  ++ C   S+  +  L+ L    CN  P    S +C     
Sbjct: 657 RLPEDLERMPCLEVLYLN--SLSCQLPSLSGLSLLRELYLDQCNLTPGVIKSDNC----- 709

Query: 121 INLMRRSSDLGALMLPS-----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
           +N ++  S LG  +L       +  L SL  L+LS C   EG   SDI            
Sbjct: 710 LNALKEFS-LGNCILNGGVFHCIFHLSSLEVLNLSRCSPEEGGTLSDI------------ 756

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
                     I+ L NL  L L  CK+L  +P+LP ++
Sbjct: 757 -------LVGISQLSNLRALDLSHCKKLSQIPELPSSL 787


>gi|168053070|ref|XP_001778961.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669633|gb|EDQ56216.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 19/262 (7%)

Query: 1   MECLRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           +  L+EL L D + ++ +P  +  LS L  L L GC +L  LP+++ +L SLK L L GC
Sbjct: 32  LSSLKELYLRDCSSLRSLPNELANLSSLTTLDLNGCSSLTSLPNDLVNLSSLKRLFLKGC 91

Query: 60  FKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
               +L   +  + SLEEL++    ++   P+ +  + +L TL   GC     S+   LP
Sbjct: 92  SNLTSLSNELANLSSLEELNLRNCLSLASLPNELANLSSLITLDLSGC-----SSLVSLP 146

Query: 119 FPI-NL--MRRSSDLGALMLPS----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
             + NL  ++R S  G   L S    L+ L SLT LDLS C     ++P+ + NL SL+ 
Sbjct: 147 NELANLSSLKRLSLRGCSSLTSSSNKLANLSSLTTLDLSGCS-SLTSLPNVLANLSSLEE 205

Query: 172 LYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
           L LS  ++   LP  +  L +L  L L  C  L SLP    N+  V       C+SL++ 
Sbjct: 206 LNLSNCSSLARLPNELTNLSSLTVLYLSGCLSLTSLPNELANLSSVNELYFRDCSSLISF 265

Query: 228 LGALKLRKSSCTIIDFVDSLKL 249
           L    +  SS T +D    L+L
Sbjct: 266 LPNELVNLSSLTRLDLSGYLRL 287



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 28/209 (13%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           LS L +L+L+G  +L  LP+ + +L SLK L L  C    +L   +  + SL  LD++G 
Sbjct: 8   LSSLKRLSLRGYSSLTSLPNELANLSSLKELYLRDCSSLRSLPNELANLSSLTTLDLNGC 67

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG 142
           +++   P+ +  + +LK L  +GC+              NL   S++L          L 
Sbjct: 68  SSLTSLPNDLVNLSSLKRLFLKGCS--------------NLTSLSNELA--------NLS 105

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCK 201
           SL +L+L +C L   ++P+++ NL SL TL LS  ++ V+LP  +  L +L++L L  C 
Sbjct: 106 SLEELNLRNC-LSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCS 164

Query: 202 RLQSLPQLPPNVEKVR---VNGCASLVTL 227
            L S      N+  +    ++GC+SL +L
Sbjct: 165 SLTSSSNKLANLSSLTTLDLSGCSSLTSL 193



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 115/231 (49%), Gaps = 23/231 (9%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  LS L +L+L+GC +L    + + +L SL TL+L GC    +L   +  
Sbjct: 140 SSLVSLPNELANLSSLKRLSLRGCSSLTSSSNKLANLSSLTTLDLSGCSSLTSLPNVLAN 199

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS-- 128
           + SLEEL++S  +++   P+ +  + +L  L   GC    S        P  L   SS  
Sbjct: 200 LSSLEELNLSNCSSLARLPNELTNLSSLTVLYLSGCLSLTS-------LPNELANLSSVN 252

Query: 129 -----DLGALM--LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                D  +L+  LP+ L  L SLT+LDLS   L    +P+++ NL SL    LS  ++ 
Sbjct: 253 ELYFRDCSSLISFLPNELVNLSSLTRLDLSG-YLRLTNLPNELTNLSSLTAPSLSGCSSL 311

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
            +LP  +  L  L  L L  C RL SLP     P ++  + +N C+SL +L
Sbjct: 312 TSLPKEMANLAILSILDLSGCLRLTSLPNELGNPSSLIILNLNSCSSLTSL 362


>gi|297800148|ref|XP_002867958.1| mob1/phocein family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313794|gb|EFH44217.1| mob1/phocein family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1419

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 108/233 (46%), Gaps = 27/233 (11%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E LR L + KT + E+  +I  +  L +L ++ C  +  LPS I  L  L+  ++ GC K
Sbjct: 701 EELRILDISKTSLPELADTIADVVHLNKLLIRNCSQIEELPS-IEKLTHLEVFDVSGCNK 759

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            + +  + G++  L E++IS T +   P  I  + NLK L  R C               
Sbjct: 760 LKKIDGSFGKMSYLHEVNISETNLAELPDKISELSNLKELIIRNC--------------- 804

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                 + L A  LP+L  L  L   D+S     E  I     NL  L  + LS  N   
Sbjct: 805 ------TKLKA--LPNLEKLTHLEIFDVSGSTELE-TIEGSFENLSCLHKVNLSGTNLCE 855

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPP--NVEKVRVNGCASLVTLLGALK 232
           LP  I+ L NLE+L + +C +L++LP L    ++E   V+GC  L  + G+ +
Sbjct: 856 LPNKISELSNLEELIVRNCTKLKALPNLEKLTHLEIFDVSGCTDLDKIEGSFE 908



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 27/218 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L E+ + +T++ E+P  I  LS L +L ++ C  L  LP N+  L  L+  ++ G  
Sbjct: 770 MSYLHEVNISETNLAELPDKISELSNLKELIIRNCTKLKALP-NLEKLTHLEIFDVSGST 828

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + E +  +   +  L ++++SGT +   P+ I  + NL+ L  R C              
Sbjct: 829 ELETIEGSFENLSCLHKVNLSGTNLCELPNKISELSNLEELIVRNC-------------- 874

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  + L A  LP+L  L  L   D+S C      I     N+  L+   L  +  +
Sbjct: 875 -------TKLKA--LPNLEKLTHLEIFDVSGCT-DLDKIEGSFENMSYLRESILCSSKRI 924

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV-EKVR 217
            L  S +CL   +  ++++C +++S      NV EK R
Sbjct: 925 VLADS-SCLERDQWSQIKECLKMKSEGSSFSNVAEKTR 961


>gi|298205187|emb|CBI17246.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 61/98 (62%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L  L  D + IKE+P SIE L+GL +L +K CKNL  LPS+I  LKSL+ L + GC 
Sbjct: 315 MKALSYLHFDGSAIKELPSSIEHLTGLKELYMKVCKNLRSLPSSICRLKSLRNLQVFGCS 374

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNL 98
             +   E +  ++ LE LD+ GT I+  PSS+  + N+
Sbjct: 375 NLDTFPEIMEDMKYLEFLDLRGTGIKELPSSMEHLHNI 412



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 159/449 (35%), Gaps = 90/449 (20%)

Query: 37  NLVRLPSNI-NSLKSLKTLNLLGCFKFENLLETV-GQVESLEELDISGTAIRCPPSSIFL 94
           NL +L  NI   L SL+T+ L  C   E   E     +++L  L   G+AI+  PSSI  
Sbjct: 278 NLFKLHKNIIQYLDSLETIYLNNCSNLEEFPEMKRSSMKALSYLHFDGSAIKELPSSIEH 337

Query: 95  MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
           +  LK L  + C    S  S                      S+  L SL  L +  C  
Sbjct: 338 LTGLKELYMKVCKNLRSLPS----------------------SICRLKSLRNLQVFGCS- 374

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
                P  + ++  L+ L L       LP+S+  L N+ +     CK LQ +P+LP ++ 
Sbjct: 375 NLDTFPEIMEDMKYLEFLDLRGTGIKELPSSMEHLHNIGEFH---CKMLQEIPELPSSLP 431

Query: 215 KVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKF 274
           ++  +     +    +  L  S         +  L  K G  I                 
Sbjct: 432 EIHAHDTKLEMLSGPSSLLWSSLLKWFKPTSNEHLNCKKGKMI----------------- 474

Query: 275 SIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF-- 331
             + PG+  IP W ++Q+ GS + +  P      N  +G+A   ++H   H      F  
Sbjct: 475 --INPGNGGIPGWVLHQDIGSQLRIELPLNWYEDNHFLGFAFFSLYHKENHFEASCHFDL 532

Query: 332 YRYPHPAHVLH-------CSMDEKFGHRGSDHLWLLYLPRQS----YYCNVKWHFESNHF 380
                P  V+        C   E F    SD LW+   P+ +    Y+    WHF +   
Sbjct: 533 RLRGDPDEVVDDLSISSWCKCHE-FNGDASDELWVTLYPKNAIPNKYHRKQPWHFLAAFD 591

Query: 381 RLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFDETTKQWTRFTSYNLNEFHHDF 440
            ++ ++        G  T   +KRCG    Y H     D           +      HD 
Sbjct: 592 FVTRIN--------GQATHTNIKRCGVQLIYTH-----DYLHDNVPMLVDHQRG---HDD 635

Query: 441 VGSNMAVAKANGSGCCDDYDEEPQPNRFR 469
            G N A             D+EP P R R
Sbjct: 636 AGENQAD------------DQEPHPKRLR 652


>gi|402479188|gb|AFQ55836.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 88/176 (50%), Gaps = 12/176 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P S+  L  L+QL L+ C NL +   +++ LK L+ L L GC     L E +G +  L
Sbjct: 13  KVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCL 72

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL----- 130
           +EL + GTAI+  P SI+ ++NL+ LS +GC          LP  I       +L     
Sbjct: 73  KELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKE-----LPLCIGTWTSLEELYLDGT 127

Query: 131 GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
           G   LP S+  L SL KL L  C      IP  I  L SLK L+L+ +    LP S
Sbjct: 128 GLQTLPNSIGYLKSLQKLHLMHCA-SLSKIPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 23/114 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN----------------------- 37
           M CL+ELLLD T IK +P SI  L  L +L+LKGC++                       
Sbjct: 69  MPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTWTSLEELYLDGTG 128

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           L  LP++I  LKSL+ L+L+ C     + +T+ +++SL+EL ++G+A+   P S
Sbjct: 129 LQTLPNSIGYLKSLQKLHLMHCASLSKIPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           +R  S+L   ++  +SGL  L KL LS C      +P +IG +  LK L L       LP
Sbjct: 29  LRNCSNLSKFLV-DVSGLKRLEKLFLSGCS-NLSVLPENIGAMPCLKELLLDGTAIKNLP 86

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
            SI  L NLEKL L+ C+ ++ LP
Sbjct: 87  ESIYRLENLEKLSLKGCRSIKELP 110


>gi|242069265|ref|XP_002449909.1| hypothetical protein SORBIDRAFT_05g025470 [Sorghum bicolor]
 gi|241935752|gb|EES08897.1| hypothetical protein SORBIDRAFT_05g025470 [Sorghum bicolor]
          Length = 1219

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           I E+P S+  L  L  L L GC NL  +P ++ +L  L+ LNL  CF  + + E +G + 
Sbjct: 570 IMELPDSLGNLMNLQYLQLSGCSNLKAIPESLCTLTKLQYLNLSSCFFLDRIPEAIGNLI 629

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPFPINLMRRSSD 129
           +L+ L++S    IR  P S+  ++NL  L    C G       A C L    +L    S 
Sbjct: 630 ALKYLNMSSCDKIRELPESLMKLQNLLHLDLSRCRGFRKGSLGALCGLTTLQHL--DMSQ 687

Query: 130 LGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           L ++ L  LS  L +LTKL      L + ++P  IGNL +L+ L LS N    LP SI  
Sbjct: 688 LRSIDLEDLSDVLENLTKLKYLRLSLID-SLPESIGNLTNLEHLDLSGNCLPCLPQSIGN 746

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L  L  L L  C  L+SLP+
Sbjct: 747 LKRLHTLDLSYCFGLKSLPE 766



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 107/245 (43%), Gaps = 19/245 (7%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L+  +   + +P  I  LS L  L + G   +  LP +I  L  LK L++ GC    
Sbjct: 392 LRCLIAPRMQNESLPECITELSKLQYLNINGSSKISALPESIGKLGCLKYLHMSGCSNIS 451

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC-NGPPSSASCYLPFPI 121
            L E+ G ++ +  LD+SG T I   P S+  + NL+ L   GC N      S Y    +
Sbjct: 452 KLPESFGDLKCMVILDMSGCTGITELPDSLGNLTNLQLLQLSGCSNLKAIPESLYGLTQL 511

Query: 122 NLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
             +  S       LP   G LG L  L LS C  G   +P   G+L  +  L +      
Sbjct: 512 QYLNLSFCRNLDQLPKTIGMLGCLKYLSLSSCS-GMSKLPESFGDLKCMVHLDMPNCAGI 570

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
           + LP S+  L NL+ L+L  C  L+++P+              SL TL     L  SSC 
Sbjct: 571 MELPDSLGNLMNLQYLQLSGCSNLKAIPE--------------SLCTLTKLQYLNLSSCF 616

Query: 240 IIDFV 244
            +D +
Sbjct: 617 FLDRI 621



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 15/211 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + I  +P SI  L  L  L + GC N+ +LP +   LK +  L++ GC     L +++G 
Sbjct: 424 SKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKCMVILDMSGCTGITELPDSLGN 483

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL------M 124
           + +L+ L +SG + ++  P S++ +  L+ L+   C          LP  I +      +
Sbjct: 484 LTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQ-----LPKTIGMLGCLKYL 538

Query: 125 RRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
             SS  G   LP S   L  +  LD+ +C  G   +P  +GNL +L+ L LS  +N   +
Sbjct: 539 SLSSCSGMSKLPESFGDLKCMVHLDMPNCA-GIMELPDSLGNLMNLQYLQLSGCSNLKAI 597

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
           P S+  L  L+ L L  C  L  +P+   N+
Sbjct: 598 PESLCTLTKLQYLNLSSCFFLDRIPEAIGNL 628



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 92/195 (47%), Gaps = 7/195 (3%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I E+P S+  L+ L  L L GC NL  +P ++  L  L+ LNL  C   + L +T+G 
Sbjct: 472 TGITELPDSLGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQLPKTIGM 531

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGP---PSSASCYLPFPINLMRRS 127
           +  L+ L +S  + +   P S   +K +  L    C G    P S    +      +   
Sbjct: 532 LGCLKYLSLSSCSGMSKLPESFGDLKCMVHLDMPNCAGIMELPDSLGNLMNLQYLQLSGC 591

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
           S+L A+   SL  L  L  L+LS C   +  IP  IGNL +LK L +S  +    LP S+
Sbjct: 592 SNLKAIP-ESLCTLTKLQYLNLSSCFFLD-RIPEAIGNLIALKYLNMSSCDKIRELPESL 649

Query: 187 NCLFNLEKLKLEDCK 201
             L NL  L L  C+
Sbjct: 650 MKLQNLLHLDLSRCR 664



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            LREL +   ++  +P S+  L+ L  L L+ C  +  LP  ++ L SLK+L + GC   +
Sbjct: 1089 LRELRISGYELTSVPESMRRLASLEMLELEWCDGISALPEWLDELSSLKSLVISGCKSIK 1148

Query: 64   NLLETVGQVESLEELDI 80
            +L   +  +  L++L I
Sbjct: 1149 SLPPCIQHLTKLQKLHI 1165


>gi|357518005|ref|XP_003629291.1| Resistance protein [Medicago truncatula]
 gi|355523313|gb|AET03767.1| Resistance protein [Medicago truncatula]
          Length = 1039

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 168/410 (40%), Gaps = 78/410 (19%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+  L  L  L+ +GC+ L + P     L SL+ LN+  C   E+  E +G++E+++ L 
Sbjct: 674  SVGFLEKLKVLSAQGCRKLRKFPPI--KLISLEELNVSFCTNLESFPEILGKMENMKNLV 731

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--INLM------------R 125
            +  T+ +  P+S   + +L+TL  R C G     SC L  P  + ++             
Sbjct: 732  LEETSFKEMPNSFQNLTHLQTLQLRCC-GVFKLPSCILTMPKLVEIIGWVSEGWQFPKSD 790

Query: 126  RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
             + D  + M+PS     ++  L L+ C L +  +P  +    ++K L+L+ NNF  LP  
Sbjct: 791  EAEDKVSSMVPS-----NVESLRLTFCNLSDEFVPIILTWFVNVKELHLAHNNFTILPEC 845

Query: 186  INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
            I     L  L +++C  LQ +  + PN++ +   GC SL            +CT      
Sbjct: 846  IKECHLLRVLCVDECHYLQEVRGIAPNLKILYARGCKSL------------TCT------ 887

Query: 246  SLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLC 305
                       + M +E  E  S   +     +P S IP WF + +   S      S+  
Sbjct: 888  ----------EMFMNQELHEAGSTMFY-----LPRSRIPDWFEHCSSNGS------SFFW 926

Query: 306  NMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLH---CSMD--EKFGHRGS--DHLW 358
              N+    A C V       + I       +P  +++   C +D  ++F H     DH +
Sbjct: 927  FRNKFPAIALCLVPSSIFVESTI-------YPIVIINGNECKLDSRDRFPHLSVEPDHTY 979

Query: 359  LLYLPRQSYYCNVKWHF---ESNHFRLSFMDEREKHCPAGSGTGLKVKRC 405
            +  L    +  N+       E NH  + +  E     P  SG  +  ++C
Sbjct: 980  IFDLQMIKFEDNLDEALLEDEWNHVEIMYQGENNALVPIESGIHVFKQKC 1029


>gi|297790450|ref|XP_002863115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308939|gb|EFH39374.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 116/249 (46%), Gaps = 40/249 (16%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P  +   + L +L L GC +LV+ PS I   K+L+ L L GC     L  ++G + 
Sbjct: 615 LKELP-DLSTATNLQKLNLSGCSSLVKPPSTIGYTKNLRKLYLGGCSSLVELSFSIGNLI 673

Query: 74  SLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNG-----------------PPSSASC 115
           +L+ELD+S  +     P SI    NL+ L+   C+                    SS SC
Sbjct: 674 NLKELDLSSLSCLVELPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINLKELDLSSLSC 733

Query: 116 YLPFP------INLMRRSSDLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAI--PSDIGN 165
            +  P      INL  +  DL +L  ++   S +G+ T LDL D G     +  P  IGN
Sbjct: 734 MVELPSSIGNLINL--KELDLSSLSCLVELPSSIGNATPLDLLDLGGCSSLVELPFSIGN 791

Query: 166 LHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L +LK L LS  +  V LP SI    NLE L L  C  L+        ++ + + GC+ L
Sbjct: 792 LINLKVLNLSSLSCLVELPFSIGNATNLEDLNLRQCSNLK--------LQTLNLRGCSKL 843

Query: 225 VTLLGALKL 233
             L   +KL
Sbjct: 844 EVLPANIKL 852



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 101/211 (47%), Gaps = 23/211 (10%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+P SI   + L +L L  C +LV LPS+I +L +LK L+L        L  ++G + +L
Sbjct: 688 ELPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINLKELDLSSLSCMVELPSSIGNLINL 747

Query: 76  EELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNGPP-----------------SSASCYL 117
           +ELD+S  +     PSSI     L  L   GC+                    SS SC +
Sbjct: 748 KELDLSSLSCLVELPSSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNLSSLSCLV 807

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK- 176
             P ++   +++L  L L   S L  L  L+L  C   E  +P++I  L SL+ L L   
Sbjct: 808 ELPFSI-GNATNLEDLNLRQCSNL-KLQTLNLRGCSKLE-VLPANI-KLGSLRKLNLQHC 863

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           +N V LP SI  L  L+ L L  C +L+ LP
Sbjct: 864 SNLVKLPFSIGNLQKLQTLTLRGCSKLEDLP 894



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 157/410 (38%), Gaps = 139/410 (33%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            LR+L LD+ + + E+P SI  L  L +L L     +V LPS+I +L +LK L+L      
Sbjct: 699  LRKLNLDQCSSLVELPSSIGNLINLKELDLSSLSCMVELPSSIGNLINLKELDLSSLSCL 758

Query: 63   ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G    L+ LD+ G +++   P SI  + NLK L+        SS SC +  P 
Sbjct: 759  VELPSSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNL-------SSLSCLVELPF 811

Query: 122  NL----------MRRSSDLGAL-----------MLPSLSGLGSLTKLDLSDCGLGEGAIP 160
            ++          +R+ S+L              +LP+   LGSL KL+L  C      +P
Sbjct: 812  SIGNATNLEDLNLRQCSNLKLQTLNLRGCSKLEVLPANIKLGSLRKLNLQHCS-NLVKLP 870

Query: 161  SDIGNLHSLKTL--------------------------------------------YLSK 176
              IGNL  L+TL                                            YL  
Sbjct: 871  FSIGNLQKLQTLTLRGCSKLEDLPANIKLESLCLLDLTDCLLLKRFPEISTNVETLYLKG 930

Query: 177  NNFVTLPASINC--------------LFN------------------------------L 192
                 +P+SI                L N                              L
Sbjct: 931  TTIEEVPSSIKSWSRLTYLHMSYSENLMNFPHAFDIITRLYVTNTEIQELPPWVKKFSHL 990

Query: 193  EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID---FVDSLKL 249
             +L L+ CK+L SLPQ+P ++  +    C S         L K  C+  D    V+S K 
Sbjct: 991  RELILKGCKKLVSLPQIPDSITYIDAEDCES---------LEKLDCSFHDPEIRVNSAKC 1041

Query: 250  LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNE-GSSITV 298
               N  A  +      ++  P+  ++I +PG E+P +F +Q+  G S+T+
Sbjct: 1042 FKLNQEARDL------IIQTPTSNYAI-LPGREVPAYFTHQSATGGSLTI 1084



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 31/199 (15%)

Query: 59  CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSA-- 113
           C K E L E +  + +L+ +D+  + +      +    NL+ L+  GC+    PPS+   
Sbjct: 588 CSKLEKLWEGIKPLPNLKRMDLRSSLLLKELPDLSTATNLQKLNLSGCSSLVKPPSTIGY 647

Query: 114 -----SCYLPFPINLMRRSSDLGALM------LPSLSGL----------GSLTKLDLSDC 152
                  YL    +L+  S  +G L+      L SLS L           +L KL+L  C
Sbjct: 648 TKNLRKLYLGGCSSLVELSFSIGNLINLKELDLSSLSCLVELPFSIGNATNLRKLNLDQC 707

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
                 +PS IGNL +LK L LS  +  V LP+SI  L NL++L L     L  LP    
Sbjct: 708 S-SLVELPSSIGNLINLKELDLSSLSCMVELPSSIGNLINLKELDLSSLSCLVELPSSIG 766

Query: 212 N---VEKVRVNGCASLVTL 227
           N   ++ + + GC+SLV L
Sbjct: 767 NATPLDLLDLGGCSSLVEL 785


>gi|215261581|gb|ACJ64861.1| disease resistance protein RPP1-like protein R7 [Arabidopsis
           thaliana]
          Length = 1135

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 34/237 (14%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L +L L+ C +LV LPS+I  L SL+ L+L  C      L + G   
Sbjct: 659 LKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLISLQILDLQDCSSLVE-LPSFGNTT 716

Query: 74  SLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPS------------------SA 113
            L++LD+    + ++ PPS      NL+ LS   C+                      S+
Sbjct: 717 KLKKLDLGNCSSLVKLPPS--INANNLQELSLINCSRVVELPAIENATKLRELELQNCSS 774

Query: 114 SCYLPFPIN------LMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNL 166
              LP  I       ++  S     + LPS  G + SL   DLS+C      +PS IGNL
Sbjct: 775 LIELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCS-NLVELPSSIGNL 833

Query: 167 HSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
             L  L +   +   TLP +IN L +L  L L DC +L+S P++  ++ ++R+NG A
Sbjct: 834 QKLYMLRMCGCSKLETLPTNIN-LISLRILNLTDCSQLKSFPEISTHISELRLNGTA 889



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 38/252 (15%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L++ + + E+P +IE  + L +L L+ C +L+ LP +I +  +L  L++ GC   
Sbjct: 741 LQELSLINCSRVVELP-AIENATKLRELELQNCSSLIELPLSIGTANNLWILDISGCSSL 799

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L  ++G + SLE  D+S  + +   PSSI  ++ L  L   GC+   +     LP  I
Sbjct: 800 VKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLQKLYMLRMCGCSKLET-----LPTNI 854

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLD--LSDCGLGEGAIPS--------------DIGN 165
           NL+     L  L L   S L S  ++   +S+  L   AI                ++  
Sbjct: 855 NLI----SLRILNLTDCSQLKSFPEISTHISELRLNGTAIKEVPLSITSWSRLAVYEMSY 910

Query: 166 LHSLK----------TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
             SLK           L L   +   +P  +  +  L  L+L +C  L SLPQL  ++  
Sbjct: 911 FESLKEFPYALDIITDLLLVSEDIQEVPPRVKRMSRLRDLRLNNCNNLVSLPQLSNSLAY 970

Query: 216 VRVNGCASLVTL 227
           +  + C SL  L
Sbjct: 971 IYADNCKSLERL 982


>gi|15227238|ref|NP_179024.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251184|gb|AEC06278.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1215

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 28/232 (12%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+P SI   + L++L L GC +L+ LPS+I +  +L+T++   C     L  ++G   +L
Sbjct: 712 ELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNL 771

Query: 76  EELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASC------YLPFPINLM 124
           +ELD+S  ++++  PSSI    NLK L    C+     P S  +C      +L    +L+
Sbjct: 772 KELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLI 831

Query: 125 RRSSDLG-ALMLPSL------------SGLGSLTKLDLSDCGLGEGAI--PSDIGNLHSL 169
           +  S +G A+ L  L            S +G  T L + + G     +  PS IGNLH L
Sbjct: 832 KLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKL 891

Query: 170 KTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
             L L        LP +IN  F L +L L DC  L++ P +  N++++ + G
Sbjct: 892 SELRLRGCKKLQVLPTNINLEF-LNELDLTDCILLKTFPVISTNIKRLHLRG 942



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 114/231 (49%), Gaps = 29/231 (12%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  + ++++   I+ L  L ++ L   KNL  LP +++S  +L+ LNL GC  
Sbjct: 651 EFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSS 709

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              L  ++G    L +L++SG +++   PSSI    NL+T+ F  C              
Sbjct: 710 LVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCE------------- 756

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNF 179
            NL+   S +G           +L +LDLS C      +PS IGN  +LK L+L   ++ 
Sbjct: 757 -NLVELPSSIG--------NATNLKELDLSCCS-SLKELPSSIGNCTNLKKLHLICCSSL 806

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
             LP+SI    NL++L L  C  L  LP       N+EK+ + GC SLV L
Sbjct: 807 KELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVEL 857



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 144/336 (42%), Gaps = 68/336 (20%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            + +KE+P SI   + L +L L  C +L  LPS+I +  +LK L+L  C     L  ++G 
Sbjct: 780  SSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGN 839

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--INLMRRSS 128
              +LE+L ++G  ++   PS I    NLK L+           SC +  P  I  + + S
Sbjct: 840  AINLEKLILAGCESLVELPSFIGKATNLKILNL-------GYLSCLVELPSFIGNLHKLS 892

Query: 129  DL------GALMLPSLSGLGSLTKLDLSDCGLGEG--AIPSDIGNLH------------- 167
            +L         +LP+   L  L +LDL+DC L +    I ++I  LH             
Sbjct: 893  ELRLRGCKKLQVLPTNINLEFLNELDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSL 952

Query: 168  -------SLKTLY------------------LSKNNFVTLPASINCLFNLEKLKLEDCKR 202
                    L+ LY                  LS  N   +   +N +  L +LKL  C +
Sbjct: 953  RSWPRLEDLQMLYSENLSEFSHVLERITVLELSDINIREMTPWLNRITRLRRLKLSGCGK 1012

Query: 203  LQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE 262
            L SLPQL  ++  +    C SL  L  +       C  +DF + LK L K    +     
Sbjct: 1013 LVSLPQLSDSLIILDAENCGSLERLGCSFNNPNIKC--LDFTNCLK-LDKEARDL----- 1064

Query: 263  FLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
               ++ A +  +SI +P  E+ ++   +  GSS+TV
Sbjct: 1065 ---IIQATARHYSI-LPSREVHEYITNRAIGSSLTV 1096



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 93/217 (42%), Gaps = 34/217 (15%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L    ++KE+P  +   + L  L L GC +LV LP +I +   L  L L GC     L  
Sbjct: 681 LFSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPS 739

Query: 68  TVGQVESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPIN 122
           ++G   +L+ +D S        PSSI    NLK L    C+     P S  +C       
Sbjct: 740 SIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGNC------- 792

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS-KNNFVT 181
                ++L  L L   S L  L               PS IGN  +LK L+L+  ++ + 
Sbjct: 793 -----TNLKKLHLICCSSLKEL---------------PSSIGNCTNLKELHLTCCSSLIK 832

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           LP+SI    NLEKL L  C+ L  LP        +++
Sbjct: 833 LPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKI 869


>gi|357131658|ref|XP_003567453.1| PREDICTED: putative disease resistance protein RGA3-like
           [Brachypodium distachyon]
          Length = 1402

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 26/209 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L+L K  ++ +P +I  L  +  L L G  +L +LP+++  L  L  LNLLGC+
Sbjct: 656 LQYMQTLILSKCSLETLPDNICSLHKICYLDLSGNSSLDKLPASLGKLSELSFLNLLGCY 715

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             + L E++ ++  L+ LD+S   AI+  P     +  L  LS  GC+            
Sbjct: 716 ILQELPESICELTCLQHLDMSECRAIQKLPDEFGSLPKLTFLSLSGCSKLTK-------- 767

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                          LP +  L SL  L+LS+C   E ++P D GNL  L  L LS    
Sbjct: 768 ---------------LPDIVRLESLEHLNLSNCHELE-SLPKDFGNLQKLGFLNLSDCYR 811

Query: 180 VT-LPASINCLFNLEKLKLEDCKRLQSLP 207
           V+ LP S   L  L+ L L DC  L  LP
Sbjct: 812 VSVLPESFCQLIQLKDLDLSDCHHLSELP 840



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            LR L L    D++ +P  +  L+ L +  ++ C  +   P ++ +L +LK ++L  C   
Sbjct: 1233 LRNLYLSSLKDLELLPEWLGHLTSLEEFVIRDCPIVTFFPESMKNLTALKVISLRDCKGL 1292

Query: 63   ENLLETVGQVESLEELDISGTAIRCP-----PSSIFLMKNLKTLSFRGCN 107
            + L E +GQ+ SL+E  I    IRC      P S+     LK L   GC+
Sbjct: 1293 DILPEWLGQLISLQEFYI----IRCANLISLPESMLNHSTLKKLYIWGCS 1338


>gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana]
          Length = 1189

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 36/239 (15%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L +L L+ C +LV LPS+I  L SL+ L+L GC      L + G   
Sbjct: 680 LKELP-NLSTATNLEELNLRNCSSLVELPSSIEKLTSLQILDLQGCSSLVE-LPSFGNAT 737

Query: 74  SLE--ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP---PSSASCYLPFPINLMRRSS 128
            LE   LD   +  + PPS      NL+ LS R C+     P+  +    + +NL+  SS
Sbjct: 738 KLEILYLDYCRSLEKLPPS--INANNLQKLSLRNCSRIVELPAIENATNLWELNLLNCSS 795

Query: 129 ------DLGA---LMLPSL--SGLGSLTKL-------------DLSDCGLGEGAIPSDIG 164
                  +G    L L  L  SG  SL KL             DLS+C      +PS IG
Sbjct: 796 LIELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNLKEFDLSNCS-NLVELPSSIG 854

Query: 165 NLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           NL +L  L +   +    LP +IN L +L+ L L DC +L+S P++  +++ +R+ G A
Sbjct: 855 NLQNLCKLIMRGCSKLEALPININ-LKSLDTLNLTDCSQLKSFPEISTHIKYLRLTGTA 912



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 23/229 (10%)

Query: 8    LLDKTDIKEMPLSIELLSGLV--QLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
            LL+ + + E+PLSI     L   +L + GC +LV+LPS+I  + +LK  +L  C     L
Sbjct: 790  LLNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVEL 849

Query: 66   LETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP---- 120
              ++G +++L +L + G + +   P +I L K+L TL+   C+   S       FP    
Sbjct: 850  PSSIGNLQNLCKLIMRGCSKLEALPININL-KSLDTLNLTDCSQLKS-------FPEIST 901

Query: 121  -INLMRRSSDLGALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNN 178
             I  +R +      +  S+     L +  +S    L E     DI     +  L LSK+ 
Sbjct: 902  HIKYLRLTGTAIKEVPLSIMSWSPLAEFQISYFESLKEFPHAFDI-----ITELQLSKDI 956

Query: 179  FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
                P  +  +  L   +L +C  L SLPQLP ++  +  + C SL  L
Sbjct: 957  QEVTPW-VKRMSRLRYFRLNNCNNLVSLPQLPDSLAYLYADNCKSLEKL 1004



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 28/170 (16%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + L E   Q+ +L+ +D+S ++      ++    NL+ L+ R C     S+   LP  
Sbjct: 655 KLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELNLRNC-----SSLVELP-- 707

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                           S+  L SL  LDL  C      +PS  GN   L+ LYL    + 
Sbjct: 708 ---------------SSIEKLTSLQILDLQGCS-SLVELPS-FGNATKLEILYLDYCRSL 750

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQL--PPNVEKVRVNGCASLVTL 227
             LP SIN   NL+KL L +C R+  LP +    N+ ++ +  C+SL+ L
Sbjct: 751 EKLPPSINA-NNLQKLSLRNCSRIVELPAIENATNLWELNLLNCSSLIEL 799


>gi|404363516|gb|AFR66722.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363522|gb|AFR66725.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363526|gb|AFR66727.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363528|gb|AFR66728.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363530|gb|AFR66729.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363548|gb|AFR66738.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363550|gb|AFR66739.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363552|gb|AFR66740.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363556|gb|AFR66742.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363558|gb|AFR66743.1| AT5G17680-like protein, partial [Capsella grandiflora]
          Length = 181

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 20/163 (12%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +G + +LE L  S T IR  P SI  +  L+ L+           S Y P         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAI--------GNSSYTP--------- 43

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L     P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PASI 
Sbjct: 44  EGLLHSACPPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASIK 101

Query: 188 CLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
            L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 102 RLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|255569044|ref|XP_002525491.1| hypothetical protein RCOM_0740700 [Ricinus communis]
 gi|223535170|gb|EEF36849.1| hypothetical protein RCOM_0740700 [Ricinus communis]
          Length = 642

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 5/105 (4%)

Query: 12  TDIKEMPLSIELLSG---LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET 68
           T++K++ L +        L  + L   + L+R P N+    +L  L L GC K   L E 
Sbjct: 313 TELKQLKLGLTTYQNKRRLKFINLSYSQALIRTP-NLTGAPNLVKLCLEGCLKLSKLPEK 371

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG-PPSS 112
           +  +E LEELD+SGTAIR  PSSI L+KNLKTLSF GC G PP+S
Sbjct: 372 LENMECLEELDVSGTAIRETPSSIVLLKNLKTLSFYGCGGQPPTS 416



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
           P+L+G  +L KL L  C L    +P  + N+  L+ L +S       P+SI  L NL+ L
Sbjct: 346 PNLTGAPNLVKLCLEGC-LKLSKLPEKLENMECLEELDVSGTAIRETPSSIVLLKNLKTL 404

Query: 196 KLEDCK-------RLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS 237
               C        RLQSLP+LP N++    + C  L      +KL  S+
Sbjct: 405 SFYGCGGQPPTSWRLQSLPELPTNIKFFGADDCVELENFPNPVKLCTST 453


>gi|215261577|gb|ACJ64857.1| disease resistance protein RPP1-like protein R3 [Arabidopsis
           thaliana]
          Length = 1193

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 34/238 (14%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D++E+P ++   + L +L L+ C +LV LPS+I  L SL+ L+L GC      L + G  
Sbjct: 676 DLQELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQRLDLQGCSSLVE-LPSFGNA 733

Query: 73  ESLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGPPS------------------S 112
             L++LD+    + ++ PPS      NL+ LS   C+                      S
Sbjct: 734 TKLKKLDLGNCSSLVKLPPS--INANNLQELSLINCSRVVKLPAIENATKLRELKLQNCS 791

Query: 113 ASCYLPFPI----NLMRRS-SDLGALM-LPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGN 165
           +   LP  I    NL +   S   +L+ LPS  G + SL   DLS+C      +PS IGN
Sbjct: 792 SLIELPLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNCS-NLVELPSSIGN 850

Query: 166 LHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           L  L  L +   +   TLP +IN L +L  L L DC RL+S P++  +++ + + G A
Sbjct: 851 LRKLTLLLMRGCSKLETLPTNIN-LISLRILDLTDCSRLKSFPEISTHIDSLYLIGTA 907



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 39/252 (15%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L++ + + ++P +IE  + L +L L+ C +L+ LP +I +  +L  L++ GC   
Sbjct: 759 LQELSLINCSRVVKLP-AIENATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSL 817

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L  ++G + SLE  D+S  + +   PSSI  ++ L  L  RGC+   +     LP  I
Sbjct: 818 VKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLET-----LPTNI 872

Query: 122 NLMRRSSDLGALMLPSLSGLGSL----TKLD-LSDCGLGEGAIPSDIGN----------- 165
           NL+     L  L L   S L S     T +D L   G     +P  I +           
Sbjct: 873 NLI----SLRILDLTDCSRLKSFPEISTHIDSLYLIGTAIKEVPLSIMSWSRLAVYKMSY 928

Query: 166 ----------LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
                     L  +  L LSK +   +P  +  +  L  L+L +C  L SLPQL  +++ 
Sbjct: 929 FESLNEFPHALDIITELQLSK-DIQEVPPWVKRMSRLRVLRLNNCNNLVSLPQLSDSLDY 987

Query: 216 VRVNGCASLVTL 227
           +  + C SL  L
Sbjct: 988 IYADNCKSLERL 999


>gi|357486563|ref|XP_003613569.1| Disease resistance-like protein [Medicago truncatula]
 gi|355514904|gb|AES96527.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1082

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 136/326 (41%), Gaps = 69/326 (21%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF- 62
           +REL LD          +  L  L +++ + C+NL+ + S++  L  LK +   GC K  
Sbjct: 670 MRELNLDNCKYLTHIFDVSCLPNLEKISFRHCENLMTIDSSVGFLNKLKIIRADGCLKLM 729

Query: 63  ---------------------ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
                                E   E +G++E++ E+ + GT+I     S   +  L+ L
Sbjct: 730 SFPPMELTSLQRLELSFCDSLECFPEILGEMENITEIVLEGTSIEELSYSFQNLTGLRKL 789

Query: 102 SFRGCNGPPSSASCYLPFPINLMRRSSDL---GALMLP------SLSGLGSLTKLDLSDC 152
             R       S    LP  I +M + S +   G L+LP      S S   ++  L L +C
Sbjct: 790 QIR------RSGVLRLPSNILMMPKLSYILVEGILLLPNKNDNLSSSTSSNVEILRLPNC 843

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
            L +  + + +    ++  L LS+N+F  LP  I     L  L L DC  L+ +  +PPN
Sbjct: 844 NLSDEFLQTSLAWFANVIHLDLSRNSFTILPEFIKECHFLITLNLNDCTCLREIRGIPPN 903

Query: 213 VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
           ++++    C SL           SSC                   SML    E+  A S 
Sbjct: 904 LKRLSALQCESL----------SSSCR------------------SMLLN-QELHEAGST 934

Query: 273 KFSIVVPG-SEIPKWFMYQNEGSSIT 297
            F +  PG S IP+WF +Q  GSSI+
Sbjct: 935 DFCL--PGTSPIPEWFQHQTRGSSIS 958


>gi|300693822|ref|YP_003749795.1| hypothetical protein RPSI07_mp0822 [Ralstonia solanacearum PSI07]
 gi|299075859|emb|CBJ35168.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum PSI07]
          Length = 932

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 101/212 (47%), Gaps = 32/212 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ L +DK  + ++P     L  L  L+L   K L  LP +  +L +LKTL+L    
Sbjct: 292 MPSLQTLTVDKAPLAKLPSDFGALGNLAHLSLSNTK-LRELPPSTRNLSTLKTLSLQDNP 350

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E L  + GQ+  L+EL ++G  I   P S+  M +L  L+                  
Sbjct: 351 KLETLPRSFGQLSGLQELTLTGNRIHELP-SVGGMSSLHKLTVDDA-------------- 395

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NF 179
            +L +  SD GA        LG+L  L LS+  L E  +PS IG+L +LKTL L  N   
Sbjct: 396 -SLAKLPSDFGA--------LGNLAHLSLSNTQLRE--LPSGIGDLSALKTLSLQDNQQL 444

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
             LP+S+  L  LE L L++      + +LPP
Sbjct: 445 AALPSSLGQLSGLEALTLKNS----GVRELPP 472



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 30/219 (13%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL-----------LGCFK 61
           D+ E+  ++E L  L  L+LKG KNL  LP  +  L +L  L L            G   
Sbjct: 146 DLHELQPALENLFLLETLSLKGAKNLKALPDAVWRLPALTELTLAETGIKALPPMAGASA 205

Query: 62  FENL------LETV----GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPS 111
            + L      LE +      +  L  L ++ T +R  PSS   +  LK+LS +  + P  
Sbjct: 206 LQRLTVEDSPLEKLPTGFADLGQLANLSLTNTQLRKLPSSTGTLPALKSLSLQ--DNPKL 263

Query: 112 SASCYLPFPINLMRRSSDLGALM--LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSL 169
                LP  +  +   + +G L+  LPS SG+ SL  L +    L +  +PSD G L +L
Sbjct: 264 E---QLPKSLGHVEELTLIGGLIHELPSASGMPSLQTLTVDKAPLAK--LPSDFGALGNL 318

Query: 170 KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             L LS      LP S   L  L+ L L+D  +L++LP+
Sbjct: 319 AHLSLSNTKLRELPPSTRNLSTLKTLSLQDNPKLETLPR 357



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCFKF 62
           L +L L  T ++ +P SI  LS L QLTLK    L  L  ++I  L  + T++L GC + 
Sbjct: 503 LTQLSLSNTQLRTLPSSIGKLSQLTQLTLKNNPRLESLTDASIQKLDKVTTIDLSGCERL 562

Query: 63  ENLLETVGQVESLEELDISG----TAIRCPPSSIFLMKNLKTL 101
             L  ++G++  L  LD+SG    T    P S +F    LK +
Sbjct: 563 SALPSSIGKLPKLNRLDLSGCTSLTMASLPRSLVFPRDELKVI 605



 Score = 45.1 bits (105), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 12/188 (6%)

Query: 40  RLPSNINSLKSLKTLN-------LLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSI 92
           RL   I+ LKS+  +N        L   K  ++   +  ++ +E +D     ++    ++
Sbjct: 98  RLSRAIDHLKSVFRMNGDSVQLRRLPVPKLPDVTFDIAHLKKIETVDCDLHELQPALENL 157

Query: 93  FLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           FL   L+TLS +G     +        P       ++ G   LP ++G  +L +L + D 
Sbjct: 158 FL---LETLSLKGAKNLKALPDAVWRLPALTELTLAETGIKALPPMAGASALQRLTVEDS 214

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
            L +  +P+   +L  L  L L+      LP+S   L  L+ L L+D  +L+ LP+   +
Sbjct: 215 PLEK--LPTGFADLGQLANLSLTNTQLRKLPSSTGTLPALKSLSLQDNPKLEQLPKSLGH 272

Query: 213 VEKVRVNG 220
           VE++ + G
Sbjct: 273 VEELTLIG 280


>gi|404363546|gb|AFR66737.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363560|gb|AFR66744.1| AT5G17680-like protein, partial [Capsella grandiflora]
          Length = 181

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 20/163 (12%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +G + +LE L  S T IR  P SI  +  L+ L+           S Y P         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAI--------GNSSYTP--------- 43

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L     P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PASI 
Sbjct: 44  EGLLHSACPPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASIK 101

Query: 188 CLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
            L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 102 RLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|57899196|dbj|BAD87306.1| putative blight resistance protein [Oryza sativa Japonica Group]
          Length = 1213

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 20/248 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L+L    ++ +P +I  L  L  L L    NL +LPS++  L  L  LNL GC 
Sbjct: 636 LQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCA 695

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K E L E++  ++ L+ LDISG  A++  P     +  L  ++   C     S    LP 
Sbjct: 696 KLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSC-----SKLTKLPD 750

Query: 120 PINLMRRS----SDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +NL        SD   L  LP  L  L  L  LD+SDC   +  +P     L  LK L 
Sbjct: 751 SLNLESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQ-VLPKTFCQLKHLKYLN 809

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL-- 227
           LS  +  + LP     L  L+ L L  C +LQSLP       N++ + ++ C SL +L  
Sbjct: 810 LSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPS 869

Query: 228 -LGALKLR 234
            LG L+L+
Sbjct: 870 SLGDLRLQ 877



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 28/167 (16%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSAS----CYLPFPIN-----LMR 125
           LD+SG  I   P S   ++N+++L    C+    P +  S    CYL    N     L  
Sbjct: 619 LDVSGFPIISLPKSFHTLQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPS 678

Query: 126 RSSDLGALMLPSLSG-------------LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
             +DL  L   +LSG             L  L  LD+S C   +  +P   G+L  L  +
Sbjct: 679 SVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQ-KLPGKFGSLAKLSFV 737

Query: 173 YLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            LS  +    LP S+N L +LE L L DC  L+ LP+   N+ ++ V
Sbjct: 738 NLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYRLEV 783


>gi|357456781|ref|XP_003598671.1| Resistance protein [Medicago truncatula]
 gi|355487719|gb|AES68922.1| Resistance protein [Medicago truncatula]
          Length = 1158

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 130/313 (41%), Gaps = 59/313 (18%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L  L LD   +I ++  S+  L  L +LT  GC +L  +P     L SL+ L+   C K 
Sbjct: 733  LMTLYLDNCINITKIHDSVGFLDNLEELTATGCTSLETIPVAF-ELSSLRVLSFSECSKL 791

Query: 63   ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
                E + ++E+L+ +++  TAI   P SI  +  L+ L+   C          LP  I 
Sbjct: 792  TRFPEILCKIENLQHINLCQTAIEELPFSIGNVTGLEVLTLMDCTRLDK-----LPSSIF 846

Query: 123  LMRRSSDLGALMLPSLSGLGSLTK------------------LDLSDCGLGEGAIPSDIG 164
             + R  ++ A    S  G G  T+                  L LS C L +  +   + 
Sbjct: 847  TLPRLQEIQA---DSCKGFGISTEFEEDNGPLNFTVCPNKIHLHLSSCNLTDEHLFICLS 903

Query: 165  NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
               ++  L +S +NF  LP  I    NL+ L L +C +LQ +  +P N+ ++  + C SL
Sbjct: 904  GFANVVHLDISYSNFTVLPPCIKQCINLKALVLTNCMQLQEISAIPQNLREIDASNCTSL 963

Query: 225  VTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIP 284
             +   ++ L ++                                  + + ++++PGS IP
Sbjct: 964  TSQSQSVLLSQA-------------------------------YHETGEKTVMLPGSSIP 992

Query: 285  KWFMYQNEGSSIT 297
            +WF + +   SI+
Sbjct: 993  EWFDHSSSERSIS 1005


>gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 972

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 28/232 (12%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+P SI   + L++L L GC +L+ LPS+I +  +L+T++   C     L  ++G   +L
Sbjct: 712 ELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNL 771

Query: 76  EELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASC------YLPFPINLM 124
           +ELD+S  ++++  PSSI    NLK L    C+     P S  +C      +L    +L+
Sbjct: 772 KELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLI 831

Query: 125 RRSSDLG-ALMLPSL------------SGLGSLTKLDLSDCGLGEGAI--PSDIGNLHSL 169
           +  S +G A+ L  L            S +G  T L + + G     +  PS IGNLH L
Sbjct: 832 KLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKL 891

Query: 170 KTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
             L L        LP +IN  F L +L L DC  L++ P +  N++++ + G
Sbjct: 892 SELRLRGCKKLQVLPTNINLEF-LNELDLTDCILLKTFPVISTNIKRLHLRG 942



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 114/231 (49%), Gaps = 29/231 (12%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  + ++++   I+ L  L ++ L   KNL  LP +++S  +L+ LNL GC  
Sbjct: 651 EFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSS 709

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
              L  ++G    L +L++SG +++   PSSI    NL+T+ F  C              
Sbjct: 710 LVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCE------------- 756

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNF 179
            NL+   S +G           +L +LDLS C      +PS IGN  +LK L+L   ++ 
Sbjct: 757 -NLVELPSSIG--------NATNLKELDLSCCS-SLKELPSSIGNCTNLKKLHLICCSSL 806

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
             LP+SI    NL++L L  C  L  LP       N+EK+ + GC SLV L
Sbjct: 807 KELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVEL 857



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 93/217 (42%), Gaps = 34/217 (15%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L    ++KE+P  +   + L  L L GC +LV LP +I +   L  L L GC     L  
Sbjct: 681 LFSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPS 739

Query: 68  TVGQVESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPIN 122
           ++G   +L+ +D S        PSSI    NLK L    C+     P S  +C       
Sbjct: 740 SIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGNC------- 792

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS-KNNFVT 181
                ++L  L L   S L  L               PS IGN  +LK L+L+  ++ + 
Sbjct: 793 -----TNLKKLHLICCSSLKEL---------------PSSIGNCTNLKELHLTCCSSLIK 832

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           LP+SI    NLEKL L  C+ L  LP        +++
Sbjct: 833 LPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKI 869



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 24/197 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +KE+P SI   + L +L L  C +L  LPS+I +  +LK L+L  C     L  ++G 
Sbjct: 780 SSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGN 839

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--INLMRRSS 128
             +LE+L ++G  ++   PS I    NLK L+           SC +  P  I  + + S
Sbjct: 840 AINLEKLILAGCESLVELPSFIGKATNLKILNL-------GYLSCLVELPSFIGNLHKLS 892

Query: 129 DL------GALMLPSLSGLGSLTKLDLSDCGLGEG--AIPSDIGNLHSLKTLYLSKNNFV 180
           +L         +LP+   L  L +LDL+DC L +    I ++I  LH      L      
Sbjct: 893 ELRLRGCKKLQVLPTNINLEFLNELDLTDCILLKTFPVISTNIKRLH------LRGTQIE 946

Query: 181 TLPASINCLFNLEKLKL 197
            +P+S+     LE L++
Sbjct: 947 EVPSSLRSWPRLEDLQM 963


>gi|345293115|gb|AEN83049.1| AT5G17680-like protein, partial [Capsella rubella]
          Length = 196

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 92/199 (46%), Gaps = 20/199 (10%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           L GC  L   P  I    S      L     + L E +G + +LE L  S T IR  P S
Sbjct: 1   LSGCSLLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASKTVIRRAPWS 60

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           I  +  L+ L+           S Y P           L     P LS    L  L  S+
Sbjct: 61  IAKLSRLQLLAI--------GNSSYTP---------EGLLHSACPPLSRFDDLRALSPSN 103

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP-QLP 210
             + E  IP+ IGNL +L  L LS NNF  +PASI  L  L +L L +C+RLQ+LP +LP
Sbjct: 104 MNIIE--IPNSIGNLWNLLELDLSGNNFKFVPASIKRLTKLNRLNLNNCQRLQALPDELP 161

Query: 211 PNVEKVRVNGCASLVTLLG 229
             +  + ++GC SLV++ G
Sbjct: 162 RGLLYIYIHGCTSLVSISG 180


>gi|404363534|gb|AFR66731.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|404363538|gb|AFR66733.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|404363540|gb|AFR66734.1| AT5G17680-like protein, partial [Capsella rubella]
          Length = 181

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 20/163 (12%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +G + +LE L  S T IR  P SI  +  L+ L+           S Y P         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAI--------GNSSYTP--------- 43

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L     P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PASI 
Sbjct: 44  EGLLHSACPPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASIK 101

Query: 188 CLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
            L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 102 RLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|404363524|gb|AFR66726.1| AT5G17680-like protein, partial [Capsella grandiflora]
 gi|404363554|gb|AFR66741.1| AT5G17680-like protein, partial [Capsella grandiflora]
          Length = 181

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 83/166 (50%), Gaps = 26/166 (15%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS---ASCYLPFPINLM 124
            +G + +LE L  S T IR  P SI  +  L+ L+    +  P     ++C         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAIGNSSFTPEGLLHSAC--------- 51

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                      P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PA
Sbjct: 52  -----------PPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKFVPA 98

Query: 185 SINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
           SI  L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 99  SIKRLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|21655201|gb|AAM28915.1| NBS [Pinus taeda]
          Length = 416

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 29/232 (12%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ++ L+ L+L + + IK +P    LL  L  + L  C+NL RLP +++ L  L+ +NL  C
Sbjct: 185 LQSLKALVLTECSKIKSLPEFGALLMWLRHIDLSFCRNLERLPDSLHYLSHLRLINLSDC 244

Query: 60  FKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
                L + +G++  L+ +D+ G   +   P S   + +L+ ++  GC+           
Sbjct: 245 HDLVTLPDNIGRLRCLQHIDLQGCHNLERLPDSFGELTDLRHINLSGCHD---------- 294

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-N 177
                ++R  D       S   L  L  +DL  C   EG +P   G+L +L+ + LS  +
Sbjct: 295 -----LQRLPD-------SFGKLRYLQHIDLHGCHSLEG-LPISFGDLMNLEYINLSNCH 341

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVT 226
           N   LP SI  L +L  + L  C  L+ LP     +E++R   V GC++L+ 
Sbjct: 342 NLERLPESIGNLSDLRHIDLSGCHNLERLPDNFRELEELRYLDVEGCSNLII 393


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 24/223 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LREL L    +K +P  I  L  L +L L   + L  LP +I  L++L+ LNL G  
Sbjct: 131 LQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQ-LKTLPKDIGQLQNLRELNLDGN- 188

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L + +G++++L EL+++   +   P  I  +KNL  L         ++    LP  
Sbjct: 189 QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLL------INNELTTLPKE 242

Query: 121 INLMRRSSDL--GALM--LPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
           I  ++    L  GAL+  LP+  G L SL +L+LS   +    +P DIG L +L+ LYLS
Sbjct: 243 IGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQIT--TLPKDIGQLQNLQVLYLS 300

Query: 176 KNNFVTLPASINCLFNLEKLKL---------EDCKRLQSLPQL 209
           +N   TLP  I  L NL +L L         +D   LQSL +L
Sbjct: 301 ENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLREL 343



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 36/227 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ LREL LD   +K +P  I  L  L +L L     L  LP +I +LK+L  L L+   
Sbjct: 177 LQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNP-LTTLPKDIGNLKNLGELLLINNE 235

Query: 59  -------CFKFENL--------LET----VGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
                    K +NL        L T    +G ++SL EL++SG  I   P  I  ++NL+
Sbjct: 236 LTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQ 295

Query: 100 TLSFRGCNGPPSSASCYLPFPINLMR--RSSDLGALMLPSL----SGLGSLTKLDLSDCG 153
            L          +    LP  I  ++  R  DL    + +L      L SL +L+LS   
Sbjct: 296 VLYLS------ENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQ 349

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           +    +P +IG L SL+ L L  N   T+P  I  L NL+ L L+D 
Sbjct: 350 IT--TLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDI 394



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 26/153 (16%)

Query: 56  LLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC 115
           +L     E L + +G++++L EL +S   ++  P  I  ++ ++ LS        ++   
Sbjct: 46  ILSLHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLS------NNQLT 99

Query: 116 YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            LP          D+G L          L +LDL++  L    +P DIG L +L+ LYL+
Sbjct: 100 TLP---------KDIGKL--------KKLRELDLTNNLLT--TLPKDIGQLQNLRELYLT 140

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            N   TLP  I  L NL +L L D  +L++LP+
Sbjct: 141 NNQLKTLPKDIGQLQNLRELYL-DNNQLKTLPK 172


>gi|404363536|gb|AFR66732.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|404363542|gb|AFR66735.1| AT5G17680-like protein, partial [Capsella rubella]
 gi|404363544|gb|AFR66736.1| AT5G17680-like protein, partial [Capsella rubella]
          Length = 181

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 20/163 (12%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +G + +LE L  S T IR  P SI  +  L+ L+           S Y P         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAI--------GNSSYTP--------- 43

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L     P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PASI 
Sbjct: 44  EGLLHSACPPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASIK 101

Query: 188 CLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
            L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 102 RLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|224284251|gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 113/230 (49%), Gaps = 25/230 (10%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            IKE+P SI  L  L  L +  C +L+++P  + SL SL+ LN  GC     L  ++G++ 
Sbjct: 789  IKELPPSISKLQLLRVLRMDYCSSLMKVPEGLGSLNSLQELNFQGCTNLRKLPNSLGKLF 848

Query: 74   SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS---D 129
            SL  LD+S    ++  P  I  + +L  LSF  C    S     +P  I  ++ S+   D
Sbjct: 849  SLRILDLSSCEKLKELPHGIENLTSLVNLSFHKCASLRS-----IPESIGRLKSSAFSMD 903

Query: 130  LGALM----LPSL-SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLP 183
            +        LP+L   LG+L +L+LSDC   E  +P     L  L  L LSK      L 
Sbjct: 904  MSCCSSLRELPNLFVELGNLRELNLSDCTSLE-KLPKGFTQLKYLVKLNLSKCGALKELC 962

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPN------VEKVRVNGCASLVTL 227
               +CL +LE L L  CK L+   +LPP+      +E + ++GC SL  L
Sbjct: 963  NEFHCLLSLEILDLSGCKMLE---ELPPDFHCLTALENLYLSGCESLQKL 1009


>gi|356546341|ref|XP_003541585.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 381

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 51/287 (17%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
           ++ ++  L+ L++    +   PSSI  ++ L+ LS R C              +   ++ 
Sbjct: 20  SIRELVRLQSLELHNCGMVQLPSSIVTLRELQVLSIRQCER------------LRFSKQD 67

Query: 128 SDLG--ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            D+   +L++PS      L +++L  C + +  I + +    ++K+L LS NNF  LP+ 
Sbjct: 68  EDVKNKSLLMPS----SYLKQVNLWSCSISDEFIDTGLAWFANVKSLDLSANNFTILPSC 123

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLR--KSSCTIIDF 243
           I     L KL L+ C  LQ +  +PPN+E +    C SL  L  A+ L   K+ C + + 
Sbjct: 124 IQECRLLRKLYLDYCTHLQEIRGIPPNLETLSAIRCTSLKDLDLAVPLESTKAGCCLREL 183

Query: 244 V--DSLKLLGKNGLAISMLREFL-------------------EVVSAPSHKFSIVVPGSE 282
           +  D   L    G+  S+  EFL                   E+  A + ++S+  PG+ 
Sbjct: 184 ILDDCENLQEIRGIPPSI--EFLSATNCRSLTASCRRMLLKQELHEAGNKRYSL--PGTR 239

Query: 283 IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIR 329
           IP+WF + + G SI+     +  N   V+      + H  KH  G++
Sbjct: 240 IPEWFEHCSRGQSISF----WFRNKFPVISLCLAGLMH--KHPFGLK 280


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 16/182 (8%)

Query: 33  KGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSI 92
           +G   L  LP  I +L++L+TLNL    +F  L E +G ++ L++LD+S   +   P  I
Sbjct: 149 EGGNQLTTLPKEIGNLQNLQTLNL-NSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEI 207

Query: 93  FLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR--RSSDLGALMLPSL----SGLGSLTK 146
             ++NL+ L+        S+    L   I  ++  ++ DLG   L +L      L +L  
Sbjct: 208 GQLQNLQKLNLN------SNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQT 261

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           LDL    L   A+P +IGNL +L+TL L  N   TLP  I  L NL+ L LE   +L +L
Sbjct: 262 LDLEGNQLA--ALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLE-GNQLTTL 318

Query: 207 PQ 208
           P+
Sbjct: 319 PK 320



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 30/229 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L    +  +P  I  L  L +L L   + L  L   I +L++L+TL+L G  
Sbjct: 187 LQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQ-LTTLSKEIGNLQNLQTLDL-GRN 244

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E +G +++L+ LD+ G  +   P  I  ++NL+TL   G      +    LP  
Sbjct: 245 QLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEG------NQLATLPEE 298

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L +L  LDL    L    +P +IG L  LK LYL  N   
Sbjct: 299 I-----------------GNLQNLQTLDLEGNQLT--TLPKEIGKLQKLKKLYLYNNRLT 339

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV--NGCASLVTL 227
           TLP  I  L  L+ L L D  +L++LP+   +++ +++   G   L TL
Sbjct: 340 TLPKEIGKLQKLQWLSL-DHNQLKTLPKEIEDLQNLKILSLGSNQLTTL 387



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 50/261 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L+   +  +   I  L  L  L L G   L  LP  I +L++L+TL+L G  
Sbjct: 210 LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDL-GRNQLTTLPEEIGNLQNLQTLDLEGN- 267

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN------------- 107
           +   L E +G +++L+ LD+ G  +   P  I  ++NL+TL   G               
Sbjct: 268 QLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQK 327

Query: 108 ----GPPSSASCYLPFPI-----------------NLMRRSSDLGALMLPSLSG------ 140
                  ++    LP  I                  L +   DL  L + SL        
Sbjct: 328 LKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTL 387

Query: 141 ---LGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
              +G L  L + D  G     +P +IG L +LK L L  N  +TLP  I  L NL++L 
Sbjct: 388 PKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKLQNLKELN 447

Query: 197 LEDCKRLQS----LPQLPPNV 213
           L     L+S    + +L PNV
Sbjct: 448 LVGNPSLRSQKEKIQKLLPNV 468



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 11/84 (13%)

Query: 145 TKLDLSDCGLGEGA-----IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
           T + + D G  EG      +P +IGNL +L+TL L+ N F TLP  I  L  L+KL L  
Sbjct: 138 TDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSH 197

Query: 200 CKRLQSLP----QLPPNVEKVRVN 219
             +L +LP    QL  N++K+ +N
Sbjct: 198 -NQLTTLPKEIGQL-QNLQKLNLN 219


>gi|168068939|ref|XP_001786264.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661795|gb|EDQ48924.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 313

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 105/205 (51%), Gaps = 9/205 (4%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D   ++ +P SI+ L+ LV L L  C +L  L  +I +L SL  LNL GC   + LLE++
Sbjct: 27  DCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIGNLNSLVKLNLYGCGSLKALLESI 86

Query: 70  GQVESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLM 124
           G + SL +L++ G  +++  P SI  + +L  L    C      P S  +   P  +NL 
Sbjct: 87  GNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSPMKLNLG 146

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLP 183
              S L AL   S+  L SL KLDL  C     A+P  IGNL+SL  L L    +   LP
Sbjct: 147 VCQS-LEALP-ESIGNLNSLVKLDLRVCK-SLKALPESIGNLNSLVKLNLYGCRSLEALP 203

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQ 208
            SI  L +L  L L  C  L++LP+
Sbjct: 204 KSIGNLNSLVDLNLYGCVSLKALPE 228



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 103/204 (50%), Gaps = 15/204 (7%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+ LV L L  C++L  LP +I +L S   LNL  C   E L E++G + 
Sbjct: 103 LKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSPMKLNLGVCQSLEALPESIGNLN 162

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-- 130
           SL +LD+    +++  P SI  + +L  L+  GC    +     LP  I  +    DL  
Sbjct: 163 SLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEA-----LPKSIGNLNSLVDLNL 217

Query: 131 -GALMLP----SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
            G + L     S+  L SL  LDL  CG    A+P  IGNL+SL  L L    +   LP 
Sbjct: 218 YGCVSLKALPESIGNLNSLVDLDLYTCG-SLKALPESIGNLNSLVKLNLGDCQSLEALPK 276

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQ 208
           SI  L +L  L L  C+ L++LP+
Sbjct: 277 SIGNLNSLVDLDLFRCRSLKALPE 300



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 118/226 (52%), Gaps = 18/226 (7%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L+ LV+L L+ C++L  LP +I++L SL  L+L  C   + L E++G + 
Sbjct: 7   LKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIGNLN 66

Query: 74  SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL +L++ G  +++    SI  + +L  L+  GC    +     LP  I  +    DL  
Sbjct: 67  SLVKLNLYGCGSLKALLESIGNLNSLVKLNLYGCGSLKA-----LPESIGNLNSLVDLDL 121

Query: 133 LM------LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
            +      LP S+  L S  KL+L  C   E A+P  IGNL+SL  L L    +   LP 
Sbjct: 122 NICRSLKALPKSIGNLNSPMKLNLGVCQSLE-ALPESIGNLNSLVKLDLRVCKSLKALPE 180

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEK-VRVN--GCASLVTL 227
           SI  L +L KL L  C+ L++LP+   N+   V +N  GC SL  L
Sbjct: 181 SIGNLNSLVKLNLYGCRSLEALPKSIGNLNSLVDLNLYGCVSLKAL 226



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 94/186 (50%), Gaps = 25/186 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++ +P SI  L+ LV+L L+ CK+L  LP +I +L SL  LNL GC   E L +++G + 
Sbjct: 151 LEALPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPKSIGNLN 210

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL +L++ G  +++  P SI  + +L  L    C    +     LP              
Sbjct: 211 SLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKA-----LP-------------- 251

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
               S+  L SL KL+L DC   E A+P  IGNL+SL  L L +  +   LP SI  L +
Sbjct: 252 ---ESIGNLNSLVKLNLGDCQSLE-ALPKSIGNLNSLVDLDLFRCRSLKALPESIGNLNS 307

Query: 192 LEKLKL 197
           L  L L
Sbjct: 308 LVDLDL 313



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 28/201 (13%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDI-SGTAIRCPPS 90
           L GC +L  LP +I +L SL  LNL  C   E L E++  + SL +LD+ +  +++    
Sbjct: 1   LYGCGSLKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRE 60

Query: 91  SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLS 150
           SI  + +L  L+  GC    +                      +L S+  L SL KL+L 
Sbjct: 61  SIGNLNSLVKLNLYGCGSLKA----------------------LLESIGNLNSLVKLNLY 98

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
            CG    A+P  IGNL+SL  L L+   +   LP SI  L +  KL L  C+ L++LP+ 
Sbjct: 99  GCG-SLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSPMKLNLGVCQSLEALPES 157

Query: 210 PPNVE---KVRVNGCASLVTL 227
             N+    K+ +  C SL  L
Sbjct: 158 IGNLNSLVKLDLRVCKSLKAL 178


>gi|168041854|ref|XP_001773405.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675281|gb|EDQ61778.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 895

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 119/254 (46%), Gaps = 42/254 (16%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ L+LD   +++E+P SI     L  L L+ C +L  LP  I  L  L+ L L GC K 
Sbjct: 654 LQTLILDDCKELRELPDSINGSKDLRNLHLEKCSSLESLPETIGDLSKLEVLRLRGCTKL 713

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSAS-CY 116
           ++L E +G + +L  L ++  T +   P SI   +NL  LS   C      P S+   C 
Sbjct: 714 KHLPEALGSLTNLWSLYLTDCTNLVSIPESIGNCRNLSNLSLGRCYNLEAIPESTGKLCN 773

Query: 117 LP------------FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG 164
           L             FP  LM+    L  L +    G GSLT L            PS I 
Sbjct: 774 LRTFESPSCDKISHFP-ELMKDLFVLKTLKV----GCGSLTTL------------PSFIS 816

Query: 165 NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGC 221
           +L  L+ L L  + FVTLP++I  L  L+ LKL  C  L+SLP+     +++R+    GC
Sbjct: 817 HLTGLQELSLCLSRFVTLPSAICALTRLQDLKLIGCDVLESLPENMGAFQELRILSLVGC 876

Query: 222 ASLVTL---LGALK 232
            SL  L   +G LK
Sbjct: 877 VSLKRLPDSVGELK 890



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+EL L  +    +P +I  L+ L  L L GC  L  LP N+ + + L+ L+L+GC   +
Sbjct: 821 LQELSLCLSRFVTLPSAICALTRLQDLKLIGCDVLESLPENMGAFQELRILSLVGCVSLK 880

Query: 64  NLLETVGQVESLEEL 78
            L ++VG+++ LEEL
Sbjct: 881 RLPDSVGELKYLEEL 895


>gi|260819515|ref|XP_002605082.1| hypothetical protein BRAFLDRAFT_85228 [Branchiostoma floridae]
 gi|229290412|gb|EEN61092.1| hypothetical protein BRAFLDRAFT_85228 [Branchiostoma floridae]
          Length = 1828

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 13/209 (6%)

Query: 9   LDKTDIKE------MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+K D+        +P S + L  L  + L GC+ L  LP N+  L +++TL+L    + 
Sbjct: 109 LEKVDLSRNPGLASLPASTKQLRYLKHVGLSGCE-LKALPENLTLLVTMETLDL-SQNEL 166

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +L   +  +  L  L IS  A R  P  +  +  L+ L  +      S     L  P +
Sbjct: 167 TSLPPGMSALRRLRVLIISDNAFRTIPEPVLSLGRLECLVMKRNKLNNSRGDLKLSVPSH 226

Query: 123 L--MRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
           L  +    +    +LP  L  L S+ +L+ S CGL   A+P  IG L +++ ++L+ N  
Sbjct: 227 LKTLDMEGNYSLKVLPEGLENLQSIEELNASYCGLE--ALPDSIGKLTTVRRIHLAGNKL 284

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             LPAS+  L +LE L LE  +RL  LP 
Sbjct: 285 RALPASLGNLLSLETLDLEGNRRLAGLPH 313



 Score = 43.5 bits (101), Expect = 0.26,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           V  +  +E LD+S   +   P  I  + +LK L   GC+    S +      +  +  S 
Sbjct: 57  VFSLNDVEVLDVSDNPLGSVPVDIASLSHLKDLRAAGCDVKEVSGNISRCTYLEKVDLSR 116

Query: 129 DLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
           + G   LP S   L  L  + LS C L   A+P ++  L +++TL LS+N   +LP  ++
Sbjct: 117 NPGLASLPASTKQLRYLKHVGLSGCEL--KALPENLTLLVTMETLDLSQNELTSLPPGMS 174

Query: 188 CLFNLEKLKLEDCKRLQSLPQ 208
            L  L  L + D    +++P+
Sbjct: 175 ALRRLRVLIISD-NAFRTIPE 194


>gi|357129911|ref|XP_003566603.1| PREDICTED: putative disease resistance protein RGA4-like
           [Brachypodium distachyon]
          Length = 1297

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 113/236 (47%), Gaps = 11/236 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L  L +       +P SI  L  L  L +  C  L  LPS+I  L+SL+ LN  GC 
Sbjct: 646 LENLETLNISSCHFHTLPDSIGHLQNLQNLNMSFCHFLCSLPSSIGKLQSLQALNFKGCA 705

Query: 61  KFENLLETVGQVESLEELDISGTAI-RCPPSSIFLMKNLKTLSFRGCNGP----PSSASC 115
             E L +TV ++++L+ L++S   I +  P +I  + NL  L+   CN      P+S  C
Sbjct: 706 NLETLPDTVCRLQNLQVLNLSQCGILQALPENIGNLSNLLHLNLSQCNSDLEAIPNSVGC 765

Query: 116 YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
                   M   S L  L   S+ GL  L  L LS       A+P    +L +L+TL LS
Sbjct: 766 ITRLHTLDMSHCSSLSELP-GSIGGLLELQTLILSHHS-HSLALPITTSHLPNLQTLDLS 823

Query: 176 KN-NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
            N     LPAS+  L+NL++L L  C  L+ LP+   N   +E + + GC  L  L
Sbjct: 824 WNIGLEELPASVGNLYNLKELILFQCWNLRELPESITNLTMLENLSLVGCEELAKL 879



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 28/172 (16%)

Query: 49  KSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
           + L+ L+L G    E L ++VG+++ L  LD+S + IR  P+ I  + NL+T+    C  
Sbjct: 577 RCLRVLDLRGSQIME-LPQSVGRLKHLRYLDVSSSPIRTLPNCISRLHNLQTIHLSNCT- 634

Query: 109 PPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH 167
                        NL          MLP S+  L +L  L++S C      +P  IG+L 
Sbjct: 635 -------------NLY---------MLPMSICSLENLETLNISSCHF--HTLPDSIGHLQ 670

Query: 168 SLKTLYLSKNNFV-TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           +L+ L +S  +F+ +LP+SI  L +L+ L  + C  L++LP     ++ ++V
Sbjct: 671 NLQNLNMSFCHFLCSLPSSIGKLQSLQALNFKGCANLETLPDTVCRLQNLQV 722


>gi|357513919|ref|XP_003627248.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521270|gb|AET01724.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1106

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 48/386 (12%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  L L  + +K++    + +  L  L L     L+ LP N++  K+L  ++L  C +
Sbjct: 643 EKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELP-NLSKAKNLAIVDLRMCGR 701

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             ++  +V  +  LE+LD+ G        S   + +L+ LS  GC              I
Sbjct: 702 LTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGC--------------I 747

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            L   S     ++L           L+L   G+ +  + S IG    L+ L LS +    
Sbjct: 748 KLKEFSVTSKEMVL-----------LNLEHTGIKQ--LSSSIGLQTKLEKLLLSHSFIEN 794

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL---GALKLRKSSC 238
           LP SI  L +L  L+L  C++LQ LP+LP ++  +   GC SL  +     AL++ K + 
Sbjct: 795 LPKSIRRLSSLRHLELRHCRKLQRLPKLPSSLITLDATGCVSLENVTFPSRALQVLKENK 854

Query: 239 TIIDFVDSLKLLGKNGLAISM-----LREFL--EVVSAPSHKF----SIVVPGSEIPKWF 287
           T + F + +KL+  +  AI +     + +F   ++ ++  H +    + V PGS +PKW 
Sbjct: 855 TKVSFWNCVKLVEHSLKAIELNAQINMMKFAHKQISTSSDHDYDAQGTYVYPGSSVPKWL 914

Query: 288 MYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPK-HSTG-IRRF-YRYPHPAHVLHCS 344
           +Y+   + + +   S++ + +  + +  C  F VP+  S G I RF       A  +   
Sbjct: 915 VYRTTRNYMFIDL-SFVNHSSDQLAFIFC--FIVPQVESEGFILRFNISVGGEAENIQVY 971

Query: 345 MDEKFGHRGSDHLWLLYLPRQSYYCN 370
           +++      SDH++L+     S Y N
Sbjct: 972 LNKPSQEIKSDHVYLMCDQGLSRYLN 997


>gi|222619836|gb|EEE55968.1| hypothetical protein OsJ_04697 [Oryza sativa Japonica Group]
          Length = 1710

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 20/248 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L+L    ++ +P +I  L  L  L L    NL +LPS++  L  L  LNL GC 
Sbjct: 636 LQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCA 695

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K E L E++  ++ L+ LDISG  A++  P     +  L  ++   C     S    LP 
Sbjct: 696 KLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSC-----SKLTKLPD 750

Query: 120 PINLMRRS----SDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +NL        SD   L  LP  L  L  L  LD+SDC   +  +P     L  LK L 
Sbjct: 751 SLNLESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQ-VLPKTFCQLKHLKYLN 809

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL-- 227
           LS  +  + LP     L  L+ L L  C +LQSLP       N++ + ++ C SL +L  
Sbjct: 810 LSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPS 869

Query: 228 -LGALKLR 234
            LG L+L+
Sbjct: 870 SLGDLRLQ 877



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 28/167 (16%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSAS----CYLPFPIN-----LMR 125
           LD+SG  I   P S   ++N+++L    C+    P +  S    CYL    N     L  
Sbjct: 619 LDVSGFPIISLPKSFHTLQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPS 678

Query: 126 RSSDLGALMLPSLSG-------------LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
             +DL  L   +LSG             L  L  LD+S C   +  +P   G+L  L  +
Sbjct: 679 SVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQ-KLPGKFGSLAKLSFV 737

Query: 173 YLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            LS  +    LP S+N L +LE L L DC  L+ LP+   N+ ++ V
Sbjct: 738 NLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYRLEV 783


>gi|297801410|ref|XP_002868589.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314425|gb|EFH44848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 46/286 (16%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P  +   S L  LTL  C +LV+LPS+I++L+ LK LN+  C K + ++ T   + 
Sbjct: 637 LKEIP-DLSNASKLKILTLSYCTSLVKLPSSISNLQKLKKLNVSSCEKLK-VIPTNINLA 694

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SLEE+D+S  + +R  P     +K L  +S +   G PSS            RR S L  
Sbjct: 695 SLEEVDMSFCSLLRSFPDISRNIKKLNVVSTQIEKGSPSS-----------FRRLSCLEE 743

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
           L +    G  SL +L           +P       SLK L +S +    +P  +  L  L
Sbjct: 744 LFI----GGRSLERLT---------HVPV------SLKKLDISHSGIEKIPDCVLGLQQL 784

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK 252
           + L +E C +L SL  LPP++  +    C S         L +  C+  D +  L+    
Sbjct: 785 QSLIVESCTKLVSLTSLPPSLVSLNAKNCVS---------LERVCCSFQDPIKDLRFYN- 834

Query: 253 NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
               + +  E    +      + + +PG E+P  F ++  G+SIT 
Sbjct: 835 ---CLKLDEEARRAIIHQRGDWDVCLPGKEVPAEFTHKAIGNSITT 877


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 17/214 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L +  +  +P  I  L  L  L L G   L  LP  I  LK+L  L L G  
Sbjct: 279 LKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDL-GTNQLTTLPKEIGQLKNLYNLGL-GRN 336

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +     + +GQ+E+L+ELD+    +   P  I  +KNL+ L          +     P  
Sbjct: 337 QLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELS------ENQLTTFPKE 390

Query: 121 INLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  +++  DLG      ++LP   G L +L  L LS   L    +P +IG L +L+ L L
Sbjct: 391 IGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLT--TLPKEIGQLKNLENLEL 448

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           S+N   TLP  I  L NL+KL L D  R  + P+
Sbjct: 449 SENRLATLPKEIGQLQNLQKLDL-DTNRFATFPK 481



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 30/198 (15%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL----LGCFKFENL 65
           D T   + PL++ +L+      L G +N   LP  I  LK+L+TLNL    L     E  
Sbjct: 41  DLTKALQNPLNVRVLN------LSG-QNFTTLPKEIEKLKNLQTLNLQDNQLATLPVE-- 91

Query: 66  LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+++LE+L++    +   P  I  ++NL+TL+ +       +    LP  I  ++
Sbjct: 92  ---IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQ------DNQLATLPVEIGQLQ 142

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
               LG         P   G L +L +L+L    L   A+P +IG L +L+ L LS+N  
Sbjct: 143 NLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT--ALPKEIGQLKNLENLELSENQL 200

Query: 180 VTLPASINCLFNLEKLKL 197
            T P  I  L  L+ L L
Sbjct: 201 TTFPKEIGQLKKLQDLGL 218



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA----- 132
           L++SG      P  I  +KNL+TL+ +       +    LP  I  ++    L       
Sbjct: 55  LNLSGQNFTTLPKEIEKLKNLQTLNLQ------DNQLATLPVEIGQLQNLEKLNLRKNRL 108

Query: 133 LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
            +LP   G L +L  L+L D  L    +P +IG L +L+TL LS+N   T P  I  L N
Sbjct: 109 TVLPKEIGQLQNLQTLNLQDNQLA--TLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLEN 166

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L++L L+   RL +LP+
Sbjct: 167 LQELNLK-WNRLTALPK 182



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           LV LP  I  LK+L+TL+L    +   L + +GQ+++LE L++S   +   P  I  ++N
Sbjct: 407 LVILPKEIGQLKNLQTLSL-SYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQN 465

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSS----DLGALMLPSL----SGLGSLTKLDL 149
           L+ L            + +  FP  + +  +    DLG   L +L    + L +L  LDL
Sbjct: 466 LQKLDL--------DTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDL 517

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
           +   L    +P +IG L +L  L L  N   TLP  I
Sbjct: 518 NTNQLT--TLPKEIGQLKNLYNLGLGTNQLTTLPKEI 552



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 24/207 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L +L L K  +  +P  I  L  L  L L+  + L  LP  I  L++L+TL L    
Sbjct: 95  LQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQ-LATLPVEIGQLQNLQTLGL---- 149

Query: 61  KFENLLET----VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
             EN L T    +GQ+E+L+EL++    +   P  I  +KNL+ L          +    
Sbjct: 150 -SENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELS------ENQLTT 202

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
            P  I  +++  DLG         P   G L +L  LDL  C      +  +IG L +L 
Sbjct: 203 FPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDL--CYNQFKTVSKEIGQLKNLL 260

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKL 197
            L LS N   TLPA I  L  L+ L L
Sbjct: 261 QLNLSYNQLATLPAEIGQLKKLQDLSL 287


>gi|402479148|gb|AFQ55816.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479158|gb|AFQ55821.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 12/176 (6%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P S+  L  L+QL L+ C NL +   +++ LK L+ L L GC     L E +G +  L
Sbjct: 13  KVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCL 72

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GA 132
           +EL + GTAI+  P SI+ ++NL+ LS +GC          LP  I  +    +L   G 
Sbjct: 73  KELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKE-----LPLCIGTLTSLEELYLDGT 127

Query: 133 LM--LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            +  LP S+  L SL KL L  C      IP  I  L SLK L+L+ +    LP S
Sbjct: 128 ELQTLPNSIGYLKSLQKLHLMHCA-SLSTIPDTINELKSLKELFLNGSAMKELPLS 182



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 2/106 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL+ELLLD T IK +P SI  L  L +L+LKGC+++  LP  I +L SL+ L L G  
Sbjct: 69  MPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDGT- 127

Query: 61  KFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRG 105
           + + L  ++G ++SL++L +   A +   P +I  +K+LK L   G
Sbjct: 128 ELQTLPNSIGYLKSLQKLHLMHCASLSTIPDTINELKSLKELFLNG 173


>gi|326492041|dbj|BAJ98245.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1285

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 116/236 (49%), Gaps = 12/236 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L  L L     + +P SI  L  L  L +  C  L  LPS+I  L+SL+ LN  GC 
Sbjct: 634 LENLETLNLSCCHFQTLPDSIGYLQNLQNLNMSFCSFLCTLPSSIGDLQSLQYLNFKGCV 693

Query: 61  KFENLLETVGQVESLEELDISGTAI-RCPPSSIFLMKNLKTLSFRGCN---GPPSSASCY 116
             E L +T+ ++++L  L++S   I R  P +I  + NL  L+   C+     P S  C 
Sbjct: 694 NLETLPDTMCRLQNLHFLNLSRCGILRALPKNIGNLSNLLHLNLSQCSDLEAIPDSIGCI 753

Query: 117 LPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
                  M   S+L  L LP S+ GL  L  L LS       A+P    +L +L+TL LS
Sbjct: 754 TRLHTLDMSHCSNL--LELPRSIGGLLELQTLILSHHA-RSLALPIATSHLPNLQTLDLS 810

Query: 176 KN-NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
            N     LP SI  L NL++L L  C  L+ LP+   N   +E++ + GCA L TL
Sbjct: 811 WNIGLEELPESIGNLHNLKELLLFQCWNLRKLPESITNLMMLERLSLVGCAHLATL 866



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 15/214 (7%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           CLR L L  + I E+P S+  L  L  L +     +  LP+ I++L +L+TL+L  C   
Sbjct: 566 CLRVLDLRGSQIMELPKSVGRLKHLRYLDVSSSP-ITSLPNCISNLLNLQTLHLSNCGNL 624

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L   +  +E+LE L++S    +  P SI  ++NL+ L+   C     S  C LP  I 
Sbjct: 625 YVLPRAICSLENLETLNLSCCHFQTLPDSIGYLQNLQNLNMSFC-----SFLCTLPSSIG 679

Query: 123 LMRRSSDL---GALMLPSLSG----LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            ++    L   G + L +L      L +L  L+LS CG+   A+P +IGNL +L  L LS
Sbjct: 680 DLQSLQYLNFKGCVNLETLPDTMCRLQNLHFLNLSRCGILR-ALPKNIGNLSNLLHLNLS 738

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           + ++   +P SI C+  L  L +  C  L  LP+
Sbjct: 739 QCSDLEAIPDSIGCITRLHTLDMSHCSNLLELPR 772



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 4   LRELLLDKT-DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ELLL +  +++++P SI  L  L +L+L GC +L  LP  + ++ +LK L    C   
Sbjct: 828 LKELLLFQCWNLRKLPESITNLMMLERLSLVGCAHLATLPDGLTTITNLKHLKNDQCPSL 887

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
           E L +  GQ   LE L +    I    SSI  +K+L  LS  GC
Sbjct: 888 ERLPDGFGQWTKLETLSL--LVIGDTYSSIAELKDLNLLS--GC 927



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++E+P SI  L  L +L L  C NL +LP +I +L  L+ L+L+GC     L + +  + 
Sbjct: 815 LEELPESIGNLHNLKELLLFQCWNLRKLPESITNLMMLERLSLVGCAHLATLPDGLTTIT 874

Query: 74  SLEEL 78
           +L+ L
Sbjct: 875 NLKHL 879


>gi|357440371|ref|XP_003590463.1| Resistance protein [Medicago truncatula]
 gi|355479511|gb|AES60714.1| Resistance protein [Medicago truncatula]
          Length = 683

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           L  KGC+ L   P     L SLK L L  C   +   E +G++ +++E+ +S T+IR  P
Sbjct: 328 LNAKGCRKLKNFPPL--RLTSLKELELRECESLKKFPELLGKLTNIQEIRLSETSIRELP 385

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT---- 145
            S   +  L+ L+     G    +S  L  P NL +  +    L+LP    + S T    
Sbjct: 386 FSFQNLSELRNLTLYE-GGILRFSSNILMMP-NLSKIYATDCRLLLPKHKDILSSTVASN 443

Query: 146 --KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
              L LS+  L +  + + +    ++K LYLS NN   +P  +N   +L  L+LEDCK L
Sbjct: 444 VEDLILSNNNLSDECVRAVLTLCANVKYLYLSDNNIKVIPECLNECHHLSCLRLEDCKSL 503

Query: 204 QSLPQLPPNVEKVRVNGCASLVT----LLGALKLRKSSCTII 241
           + +   PPN+++     C SL +    +L + KL ++ C  I
Sbjct: 504 EEIRGFPPNLKRFSAMRCESLTSSCRRMLLSQKLLEAGCIEI 545


>gi|218189697|gb|EEC72124.1| hypothetical protein OsI_05113 [Oryza sativa Indica Group]
          Length = 995

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 20/248 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L+L    ++ +P +I  L  L  L L    NL +LPS++  L  L  LNL GC 
Sbjct: 636 LQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCA 695

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K E L E++  ++ L+ LDISG  A++  P     +  L  ++   C     S    LP 
Sbjct: 696 KLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSC-----SKLTKLPD 750

Query: 120 PINLMRRS----SDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +NL        SD   L  LP  L  L  L  LD+SDC   +  +P     L  LK L 
Sbjct: 751 SLNLESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQ-VLPKTFCQLKHLKYLN 809

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL-- 227
           LS  +  + LP     L  L+ L L  C +LQSLP       N++ + ++ C SL +L  
Sbjct: 810 LSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPS 869

Query: 228 -LGALKLR 234
            LG L+L+
Sbjct: 870 SLGYLRLQ 877



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 28/167 (16%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSAS----CYLPFPIN-----LMR 125
           LD+SG  I   P S   ++N+++L    C+    P +  S    CYL    N     L  
Sbjct: 619 LDVSGFPIISLPKSFHTLQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPS 678

Query: 126 RSSDLGALMLPSLSG-------------LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
             +DL  L   +LSG             L  L  LD+S C      +P   G+L  L  +
Sbjct: 679 SVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGC-CALQKLPGKFGSLAKLSFV 737

Query: 173 YLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            LS  +    LP S+N L +LE L L DC  L+ LP+   N+ ++ V
Sbjct: 738 NLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYRLEV 783


>gi|167999915|ref|XP_001752662.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696193|gb|EDQ82533.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 24/208 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L++L +      E+ L+I+  S L  LTL GC N+  +  +I  L  L  L+L+GC 
Sbjct: 1   MERLKKLEMCILRAAEIDLTIKFPSQLKDLTLIGCNNMEVMHEHILQLTGLLELHLIGCN 60

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K  +L     ++ +L +  +    +IR    SI  + +++ L F GC    +     LP 
Sbjct: 61  KLHDLTAEFAEMRNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGCTNIAT-----LP- 114

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                           P +  + +L KL+L  C      +PS+IGNL +L  LYL ++  
Sbjct: 115 ----------------PEVGNVQTLLKLNLVLCKC-LVRLPSEIGNLKNLTHLYLGQSGI 157

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
            +LPA I  L +LE L L  C RL+ LP
Sbjct: 158 TSLPAEIGKLCSLEDLSLTGCVRLEKLP 185



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           I+ +  SI  L+ + +L   GC N+  LP  + ++++L  LNL+ C     L   +G ++
Sbjct: 86  IRNLHRSIGQLASIRELDFSGCTNIATLPPEVGNVQTLLKLNLVLCKCLVRLPSEIGNLK 145

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCYLPFPINLMRRSSD 129
           +L  L +  + I   P+ I  + +L+ LS  GC      PP          +N+    S 
Sbjct: 146 NLTHLYLGQSGITSLPAEIGKLCSLEDLSLTGCVRLEKLPPQVGQLTSLRRLNM---GSC 202

Query: 130 LGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASIN 187
            G   LPS + G+ SL KL L+ C      +P ++  L +L++L L     +  LPA I 
Sbjct: 203 TGIKELPSEIGGMVSLQKLVLNSCT-ALARLPDELFGLVNLQSLELDYMKLLAHLPAEIG 261

Query: 188 CLFNLEKLKLEDCKRLQSLPQLP-----PNVEKVRVNGCASL 224
            L +L++L L  C RL  LP  P     P ++ + + GC  L
Sbjct: 262 NLRSLQRLSLNCCTRLNRLP--PEIGSLPALQVLNLVGCTGL 301


>gi|108738564|gb|ABG00814.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 27/196 (13%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L L+ C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDLRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
           I  ++                 SL KL L D  L    +PS IG+L +L+ L+L +  + 
Sbjct: 190 IGTLK-----------------SLEKLYLDDTALKN--LPSSIGDLKNLQDLHLVRCTSL 230

Query: 180 VTLPASINCLFNLEKL 195
             +P SIN L +L+KL
Sbjct: 231 SKIPDSINELKSLKKL 246



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L  LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYILNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 47/232 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCIFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG------------LGSLT 145
           ++ L  R C         +L F   L +   D+  L + +L G            L  L 
Sbjct: 313 IRELELRNCK--------FLKF---LPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLV 361

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           +L +S+C + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 362 ELRMSNCKMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|193584702|gb|ACF19651.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa]
          Length = 1125

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 25/300 (8%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           +L D   + E+  SI  L  ++ ++LK C +L  LP NI SLKSLKTL L GC K + L 
Sbjct: 703 ILKDCPRLSEVSQSIGHLKKVLLISLKDCISLCNLPRNIYSLKSLKTLILSGCLKIDKLE 762

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E + Q++SL  L    T I   P S+   K++  +S  G  G   S   +     + M  
Sbjct: 763 EDLEQMKSLTTLMAGNTGITKVPFSVVRSKSIGFISLCGYEG--FSRDVFPSIIWSWMSP 820

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS- 185
           +    +L + + SG+ SL  LD S     + +  S +  L  L++L+L   + + L    
Sbjct: 821 NHQGFSLPVQTASGMSSLVSLDASTSIFHDLSSISTV--LPKLQSLWLKCGSELQLSQDA 878

Query: 186 ---INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
              +N L     ++L+       +P +   +E      C S V +      RKS      
Sbjct: 879 TQILNALSAASSVELQSSATASQVPDVHSLIE------CRSQVQVSTTTNSRKS------ 926

Query: 243 FVDSLKLLGKNGLAISMLRE-FLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRP 301
               L  +G N L  ++L+E  L+ ++   +  S  +P    P W  + +EGSS+    P
Sbjct: 927 ---LLFQMGMNSLIANILKERILQNLTVEDYG-SFSLPCDNYPDWLAFNSEGSSVIFEVP 982


>gi|456876344|gb|EMF91453.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 1300

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 6    ELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
            EL LD    +  P ++     L  L+++ C NL  +P +I +L  L  LNL G  K   L
Sbjct: 904  ELDLDWIKFERFPTAVTTFKSLTSLSMRNC-NLTEIPESIGNLGRLTKLNL-GSNKLSAL 961

Query: 66   LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
               +G++E L  L +        P ++  +KNL+ L+ R    P  S        +  + 
Sbjct: 962  PAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLEMLNVRSNQIPSLSEGIGTLASLKDLN 1021

Query: 126  RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
               +  + +  ++S +  LT+LDL    L +   P  +  + +L+ L LS+N   ++P S
Sbjct: 1022 LQGNQLSDVPSAISKIPQLTELDLGKNKLTK--FPEAVTLIKNLRVLDLSENQIASIPDS 1079

Query: 186  INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTII-DFV 244
            I  +  LE L LED      +  LP  +EK+           L +L+L+K+    + DF+
Sbjct: 1080 IGAISTLEVLDLEDL----PINSLPAQLEKLEA---------LISLRLQKTKLVDVPDFL 1126

Query: 245  DSLKLL 250
             S+K L
Sbjct: 1127 ASMKSL 1132



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 36/189 (19%)

Query: 28   VQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE---ELDISGTA 84
            ++L     K+LV L    NS   L+ + L     FE+  +  G ++  +   ELD+    
Sbjct: 856  IELQKWNVKDLVVL----NSCAQLEKVELRYIQGFESDFDCSGLLKDSKAKIELDLDWIK 911

Query: 85   IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
                P+++   K+L +LS R CN         +P                  S+  LG L
Sbjct: 912  FERFPTAVTTFKSLTSLSMRNCN------LTEIP-----------------ESIGNLGRL 948

Query: 145  TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
            TKL+L    L   A+P+ IG L  L  LYL  N F   P ++  L NLE L +    R  
Sbjct: 949  TKLNLGSNKLS--ALPAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLEMLNV----RSN 1002

Query: 205  SLPQLPPNV 213
             +P L   +
Sbjct: 1003 QIPSLSEGI 1011


>gi|296080986|emb|CBI18584.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 45/289 (15%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           + +L  LG L   ++ D     G  PSD+  L  L+ L LS+N+   +P +I  L NL +
Sbjct: 35  MENLINLGLLETQNMMD-----GVAPSDLWCLSLLEDLDLSQNSMCHIPIAITQLCNLRR 89

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNG 254
           L +  CK L+ +P+LP ++ K+  + C     + G L                     + 
Sbjct: 90  LNISHCKMLEEIPELPSSLRKIDAHDCP----IFGTLS------------------NPST 127

Query: 255 LAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYA 314
           L  S L ++ + V  P    SI + G+ IP+W ++Q  GS I +  P      N  +G+ 
Sbjct: 128 LLWSFLLKWFKTVEPPLKWRSINLGGNGIPRWVLHQEMGSQIRIELPMNWYEDNHFLGFG 187

Query: 315 ACRVFHVPKHSTGIRRFYRYPHPAHVLH--CSMDEKFGHRGSDHLWLLYLP----RQSYY 368
              + H  K+ +   +F       +++   CS   K     SD + L+Y P    R +++
Sbjct: 188 FFCLHHQSKNISLSLKFDEGECAYNIVQIPCSKCHKINDSESDQVLLVYYPKISFRDAFH 247

Query: 369 CNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEE 417
            N   H +++ +   F  E             K K CG H  Y  + ++
Sbjct: 248 SNQYMHLQASFWSDYFFRES------------KFKSCGVHLIYCQDDQQ 284


>gi|224167093|ref|XP_002338998.1| predicted protein [Populus trichocarpa]
 gi|222874187|gb|EEF11318.1| predicted protein [Populus trichocarpa]
          Length = 274

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 10/157 (6%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L+  + + E+  SIE L+ LV L L+GC  L  LP +  ++KSLK LN+ GC + 
Sbjct: 119 LEKLILEGCSSLVEVHQSIENLTSLVFLNLEGCWRLKILPESFANVKSLKCLNISGCLQL 178

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E L E +G +ESL +L   G       SSI  +K + TLS RGC+  P S+S      +N
Sbjct: 179 EKLPERMGDMESLTKLLAYGIENEQFLSSIGQLKYVGTLSLRGCSSAPPSSSLISTGVLN 238

Query: 123 LMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGA 158
             R         LP S     S+  L LS+CGL + A
Sbjct: 239 WKR--------WLPASFIEWISVKHLKLSNCGLSDRA 267


>gi|297811235|ref|XP_002873501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319338|gb|EFH49760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 144/317 (45%), Gaps = 51/317 (16%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D  ++KE+P      + L +L L  C +L++LPS+I +  +LK LNL  C         +
Sbjct: 603 DSANLKELP-DFSTATNLQKLNLSYCSSLIKLPSSIGNATNLKKLNLRRCSNIMEFPSFI 661

Query: 70  GQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS- 127
            +  +LE LD+S  + +   P  I  ++ L+ L   GC     S    LP  INL     
Sbjct: 662 EKATNLEILDLSSCSNLVELPLFIKNLQKLQKLRLGGC-----SKLQVLPTNINLESLVE 716

Query: 128 ---SDLGALML-PSLSGLGSLTKLDLSDCGLGEGAIPSDIG------NLH---------- 167
              +D  AL L P +S   ++  L LS+  + E  +P  I        LH          
Sbjct: 717 LDLTDCSALKLFPEIST--NVRVLKLSETAIEE--VPPSIAFWPRLDELHMSYFENLKEL 772

Query: 168 -----SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
                S+  LYLS      +P+ +  +  L++L L+ C++L+SLPQ+P ++  +    C 
Sbjct: 773 PHALCSITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIPESLSIIDAEDCE 832

Query: 223 SLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE 282
           SL  L  +    K     + F    KL   N  A  +      ++  P+ + +I +PG E
Sbjct: 833 SLERLDCSFHNPK---ICLKFAKCFKL---NQEAKDL------IIQTPTSEHAI-LPGGE 879

Query: 283 IPKWFMYQN-EGSSITV 298
           +P +F +++  G S+T+
Sbjct: 880 VPSYFTHRSTSGGSLTI 896


>gi|296090594|emb|CBI40963.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 96/190 (50%), Gaps = 42/190 (22%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  +P+ I +LKSL+TL L  C K E L                       P+S   ++N
Sbjct: 2   LRSIPNGICNLKSLETLLLSDCSKLETL-----------------------PTSFADLRN 38

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+ LSF GC G                  S D    +LP  S LGSL  L+LSDC + +G
Sbjct: 39  LQVLSFHGCKG----------------LNSPDF---LLPPSSALGSLKDLNLSDCNIVDG 79

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           +  S +G L SLK L LS N F +LP+SI+    L  LKL +C+RL +LP+LP ++E + 
Sbjct: 80  SQLSSLGLLLSLKKLNLSGNKFASLPSSISQFPQLTVLKLLNCRRLGALPELPLSIEVIN 139

Query: 218 VNGCASLVTL 227
            + C SL T+
Sbjct: 140 AHNCISLETI 149


>gi|255573549|ref|XP_002527699.1| ATP binding protein, putative [Ricinus communis]
 gi|223532930|gb|EEF34698.1| ATP binding protein, putative [Ricinus communis]
          Length = 908

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 49/294 (16%)

Query: 145 TKLDLSDCGLGEGA--IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           +KL+L    L EGA  + S    L SL+ L L  NNF  +P  I  LF+L+ L +  C  
Sbjct: 615 SKLEL----LWEGAKLLESSFSRLSSLEHLDLRGNNFSNIPGDIRQLFHLKLLDISSCSN 670

Query: 203 LQSLPQLPPNVEKVRVNGCASL--VTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISML 260
           L+SLP+LP ++E V  + C SL  V++  +  + + +  +  F +  KL     L+  + 
Sbjct: 671 LRSLPELPSHIEYVNAHDCTSLESVSIPSSFTVSEWNRPMFLFTNCFKL----NLSAFLN 726

Query: 261 REFLEVVSA---PSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCN-------MNQV 310
            +F+++  +   PS    I  PGS+IP+   +Q+ GS +TV  P +  N       +  V
Sbjct: 727 SQFIDLQESGLLPSA--GICFPGSKIPEQISHQSAGSLLTVQLPVHWSNSQFRGFALAAV 784

Query: 311 VGYAACRVFH--VPKHSTGIRRFYRYPHPAHVLHCSMDEKF----GHR---------GSD 355
           +G+  C   H  + K +  +R         H    S+ ++F    GH          GSD
Sbjct: 785 IGFKDCLDNHGFLVKCTIKLR-------AMHGDSISLQQEFIIFHGHSGHWNNSRILGSD 837

Query: 356 HLWLLYLPRQSYYCNV--KWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGF 407
           H++L Y  R +   +    W  +S H   SF D            G +V+ CGF
Sbjct: 838 HVFLSYNHRVNLMESQGDDWQNKSCHTTASF-DFYAVDSMGRPLCGSEVRECGF 890


>gi|168032282|ref|XP_001768648.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680147|gb|EDQ66586.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 313

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 35/223 (15%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++ E+P +I +L+ L++L L  C  L  L     SLKSL    L  C     L + +GQ+
Sbjct: 6   NMDELPETILVLTSLLELHLISCNKLQDLTIGFGSLKSLCRFRLENCLSIRQLPKAIGQL 65

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +L+E+D+SG T I   PS I  +  L+ L+   C        C +  P+          
Sbjct: 66  TNLQEMDLSGCTNITTLPSEIGNLLGLQKLNLSRCK-------CLIRVPVE--------- 109

Query: 132 ALMLPSLSGLGSLTKL---DLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNFVTLPASIN 187
                    LGSLTKL   +LS  G+    +P +IG L +L++L+L   +    LP  I 
Sbjct: 110 ---------LGSLTKLTTFNLSQSGI--TTLPQEIGKLRNLESLFLFGCSRLEKLPKDIG 158

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
            L +L +L L  C  L+ +P+    +E   K+ +N C SLV L
Sbjct: 159 KLSSLLQLHLGSCTSLKEIPREIGKLESLQKLSLNSCTSLVRL 201



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 39/285 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           I+++P +I  L+ L ++ L GC N+  LPS I +L  L+ LNL  C     +   +G + 
Sbjct: 55  IRQLPKAIGQLTNLQEMDLSGCTNITTLPSEIGNLLGLQKLNLSRCKCLIRVPVELGSLT 114

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L   ++S + I   P  I  ++NL++L   GC+               L +   D+G  
Sbjct: 115 KLTTFNLSQSGITTLPQEIGKLRNLESLFLFGCS--------------RLEKLPKDIGK- 159

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNFVTLPASINCLFNL 192
                  L SL +L L  C      IP +IG L SL+ L L S  + V LP  +  +  L
Sbjct: 160 -------LSSLLQLHLGSCT-SLKEIPREIGKLESLQKLSLNSCTSLVRLPEEVFHIVTL 211

Query: 193 EKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
           + L L+ CK L  L     N   ++++ +N C    T L  L L  +S   +  ++ L L
Sbjct: 212 QALDLDHCKLLAHLSSEIRNLKSLQRLSLNCC----TRLNRLPLEIAS---LPSLEVLNL 264

Query: 250 LGKNGLAISM---LREFLEVVSAPSHKFS--IVVPGSEIPKWFMY 289
           +G  GL   +   LR+  +  S   H+    +++ G + P + +Y
Sbjct: 265 VGCTGLKPELPKDLRKMTKENSVKVHRDDDLVILEGPKNPSFKLY 309



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 24/178 (13%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPS 90
           + GC N+  LP  I  L SL  L+L+ C K ++L    G ++SL    +    +IR  P 
Sbjct: 1   ISGCNNMDELPETILVLTSLLELHLISCNKLQDLTIGFGSLKSLCRFRLENCLSIRQLPK 60

Query: 91  SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLS 150
           +I  + NL+ +   GC               N+    S++G L+         L KL+LS
Sbjct: 61  AIGQLTNLQEMDLSGCT--------------NITTLPSEIGNLL--------GLQKLNLS 98

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            C      +P ++G+L  L T  LS++   TLP  I  L NLE L L  C RL+ LP+
Sbjct: 99  RCK-CLIRVPVELGSLTKLTTFNLSQSGITTLPQEIGKLRNLESLFLFGCSRLEKLPK 155



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 9   LDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET 68
           L ++ I  +P  I  L  L  L L GC  L +LP +I  L SL  L+L  C   + +   
Sbjct: 121 LSQSGITTLPQEIGKLRNLESLFLFGCSRLEKLPKDIGKLSSLLQLHLGSCTSLKEIPRE 180

Query: 69  VGQVESLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGC 106
           +G++ESL++L + S T++   P  +F +  L+ L    C
Sbjct: 181 IGKLESLQKLSLNSCTSLVRLPEEVFHIVTLQALDLDHC 219


>gi|124359569|gb|ABN05977.1| Leucine-rich repeat [Medicago truncatula]
          Length = 255

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 11/152 (7%)

Query: 137 SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
           SL  L SL  ++LS C L E +IP  + +L SLK+L L+ NNFV +P++I+ L  L  L 
Sbjct: 10  SLWNLPSLRYINLSYCNLSEESIPDYLRHLSSLKSLDLTGNNFVYIPSTISKLPKLHFLY 69

Query: 197 LEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSS-CTIIDFVDSLKLLGKNGL 255
           L  C++LQ LP++  ++ ++  + C SL T     K   +  C++      L  + K   
Sbjct: 70  LNCCQKLQLLPEISSSMTELDASNCDSLET----TKFNPAKPCSVFASPRQLSYVEKK-- 123

Query: 256 AISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
               +  F+E +  PS +F +++PG E P  +
Sbjct: 124 ----INSFIEGLCLPSARFDMLIPGKETPSCY 151


>gi|224145373|ref|XP_002325618.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862493|gb|EEE99999.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 638

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 139/328 (42%), Gaps = 66/328 (20%)

Query: 137 SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP-ASINCLFNLEKL 195
           S+  L  L  LD+S C   E ++P     + SL  L +SK     +P  S   + +L  L
Sbjct: 324 SIQFLTRLIMLDMSGCSELE-SLPEITVPMKSLLYLIMSKTGIKEIPLISFKHMISLWSL 382

Query: 196 KLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGL 255
           KL D   ++ LP+LPP++ ++R + CASL T+   + +     ++ DF +  KL  K  +
Sbjct: 383 KL-DGTPIKVLPELPPSLSRLRTHDCASLETVTSIINI----GSLWDFTNCFKLDQKPLV 437

Query: 256 AISMLR----------EFLEVVSAPSH-----------------KFSIVVPGSEIPKWFM 288
           A   L+            L  + A SH                 +  +V+PGSEIP+WF 
Sbjct: 438 AAMHLKIQVSLLTLTLFLLSFLLASSHFRNATCVLQSGEEIPDGRIQMVLPGSEIPEWFG 497

Query: 289 YQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHV--LHCSMD 346
            +  GSS+T+  PS   N +Q+ G A C VF VP        FY+  +  HV   +   D
Sbjct: 498 NKGIGSSLTIRLPS---NCHQLKGIAFCLVFLVP------LPFYKVYYNYHVKSKNGKHD 548

Query: 347 E-KFGHRGSDHLWLLYLPRQSYYCNVKWHFE---------SNHFRLSFMDEREKHCPAGS 396
           E  F  R    L  + +   SY+  + +  E          N     F    E  C    
Sbjct: 549 EVVFASREELTLTDVLVSCDSYHMILHYELELVKHLRKHSGNEVTFKFYHLEEDDCGRKL 608

Query: 397 GTGL----KVKRCGFHPGYMHEVEEFDE 420
           G  +    K+K CG    Y+H    FDE
Sbjct: 609 GRDIRRPFKLKSCGV---YLH----FDE 629



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E + EL L  T IKE+P SI+ L+ L+ L + GC  L  LP     +KSL  L +    
Sbjct: 305 LEFIEELNLSGTAIKEVPSSIQFLTRLIMLDMSGCSELESLPEITVPMKSLLYLIMSKTG 364

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPP 89
             E  L +   + SL  L + GT I+  P
Sbjct: 365 IKEIPLISFKHMISLWSLKLDGTPIKVLP 393


>gi|404363518|gb|AFR66723.1| AT5G17680-like protein, partial [Capsella grandiflora]
          Length = 181

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 81/163 (49%), Gaps = 20/163 (12%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +G + +LE L  S T IR  P SI  +  L+ L+           S Y P         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAI--------GNSSYTP--------- 43

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L     P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PAS  
Sbjct: 44  EGLLHSACPPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKFVPASFK 101

Query: 188 CLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
            L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 102 RLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|345291873|gb|AEN82428.1| AT4G12010-like protein, partial [Capsella grandiflora]
          Length = 167

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 92/185 (49%), Gaps = 21/185 (11%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           LLLD T IK +P S+E LS L  L LK CK L  L S++  LK L+ L L GC + E   
Sbjct: 4   LLLDGTAIKSLPESVETLSKLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCTQLEVFP 63

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E    +ESLE L +  TAI   P  +  + N+KT S  G N   S    ++P        
Sbjct: 64  EIKEDMESLEILLLDDTAITEIP-KMMCLSNIKTFSLCGTNSQVSVNMFFMP-------- 114

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                    P+L G   LT L LS C L +  +P +IG L SL++L LS NN   LP   
Sbjct: 115 ---------PTL-GCSRLTDLYLSRCSLYK--LPGNIGGLXSLQSLCLSGNNIENLPEXF 162

Query: 187 NCLFN 191
           N L N
Sbjct: 163 NQLHN 167


>gi|108738444|gb|ABG00755.1| disease resistance protein [Arabidopsis thaliana]
          Length = 544

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSXGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 107/209 (51%), Gaps = 27/209 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ELLLD T IK +P SI  L  L  L+L+GCK +  LP  I +LKSL+ L  L   
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKL-YLDDT 204

Query: 61  KFENLLETVGQVESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             +NL  + G +++L++L  +  T++   P SI  +K+LK L   G      SA   LP 
Sbjct: 205 ALKNLPSSXGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING------SAVEELP- 257

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
               ++ SS      LPSL    +       DC   +  +PS IG L+SL  L LS    
Sbjct: 258 ----LKPSS------LPSLYDFSA------GDCKFLK-QVPSSIGRLNSLLQLQLSSTPI 300

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             LP  I  L  + +L+L +CK L+ LP+
Sbjct: 301 EALPEEIGALHFIRELELRNCKFLKFLPK 329



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P S   L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSXGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|15238107|ref|NP_198970.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178009|dbj|BAB11461.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007308|gb|AED94691.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1085

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 52/289 (17%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L  L L  CK LV LPS+I++L  LK L + GC K   ++ T   + 
Sbjct: 641 LKEIP-NLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCEKLR-VIPTNINLA 698

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSD 129
           SLE + ++  + +R  P    +  N+KTLS       N PPS A  +           S 
Sbjct: 699 SLEVVRMNYCSRLRRFPD---ISSNIKTLSVGNTKIENFPPSVAGSW-----------SR 744

Query: 130 LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
           L  L + S S L  LT                      S+ +L LS ++   +P  +  L
Sbjct: 745 LARLEIGSRS-LKILTHAP------------------QSIISLNLSNSDIRRIPDCVISL 785

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
             L +L +E+C++L ++P LPP +E +  N CASL  +  +      + TI+ F + LKL
Sbjct: 786 PYLVELIVENCRKLVTIPALPPWLESLNANKCASLKRVCCSF----GNPTILTFYNCLKL 841

Query: 250 LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
             +    I        ++  P  ++ I +PG EIP  F ++  G+SIT+
Sbjct: 842 DEEARRGI--------IMQQPVDEY-ICLPGKEIPAEFSHKAVGNSITI 881


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 20/223 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL+L K  +  +P  I  L  L  LTL G + L  LP  I  L+SL+ L +LG  
Sbjct: 318 LQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQ-LTTLPKEIGKLQSLQEL-ILGKN 375

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   + + + Q++ L+ L +S   +   P  I  ++NL+ L  R      ++    LP  
Sbjct: 376 QLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLR------NNQLTTLPKE 429

Query: 121 I-NLMR-RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEG---AIPSDIGNLHSLKTLYL 174
           I NL + +  DLG   L +L   +G L   +L D  L       +P +IG L  LK LYL
Sbjct: 430 IGNLQKLQELDLGYNQLTALPEEIGKLQ--NLKDLYLNNNKLTTLPKEIGKLQKLKDLYL 487

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQS----LPQLPPNV 213
           + N   TLP  I  L  L+ L L D   L+S    + +L PNV
Sbjct: 488 NNNKLTTLPKEIEKLQKLKNLHLADNPFLRSQKEKIQKLLPNV 530



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 25/224 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L+      +P  I  L  L +L+L G   L  LP  I  L+ LK L+L G  
Sbjct: 157 LQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSL-GRNQLTTLPEEIGKLQKLKELHLDGN- 214

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +G+++ L+EL +        P  I  ++NL+ L+        S+    LP  
Sbjct: 215 QFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNL------DSNRFTTLPKE 268

Query: 121 INLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  +++   L         LP   G L SL +L L    L    +P +IG L SL+ L L
Sbjct: 269 IGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLT--TLPKEIGKLQSLQELIL 326

Query: 175 SKNNFVTLPASINCLFNLEKLKL---------EDCKRLQSLPQL 209
            KN   T+P  I  L +L+ L L         ++  +LQSL +L
Sbjct: 327 GKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQEL 370



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 11/153 (7%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-NLMR-R 126
           +G++++L +LD+S   +   P  I  ++NL+ L+        S+    LP  I NL + +
Sbjct: 131 IGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLN------SNQFTTLPKEIWNLQKLQ 184

Query: 127 SSDLGALMLPSL-SGLGSLTKL-DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              LG   L +L   +G L KL +L   G     +P +IG L  LK L+L  N F TLP 
Sbjct: 185 KLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPK 244

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            I  L NL+ L L D  R  +LP+   N++K++
Sbjct: 245 EIKKLQNLQWLNL-DSNRFTTLPKEIGNLQKLQ 276



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 36/218 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L    +  +P  I  L  L  L L        LP  I +L+ L+ L+L G  
Sbjct: 134 LQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNL-NSNQFTTLPKEIWNLQKLQKLSL-GRN 191

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E +G+++ L+EL + G      P  I  ++ LK L         S+    LP  
Sbjct: 192 QLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHL------GSNRFTTLPKE 245

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L +L  L+L         +P +IGNL  L+ L L+ N   
Sbjct: 246 I-----------------KKLQNLQWLNLDSNRFT--TLPKEIGNLQKLQKLSLAHNQLT 286

Query: 181 TLPASINCLFNLEKLKL---------EDCKRLQSLPQL 209
           TLP  I  L +L++L L         ++  +LQSL +L
Sbjct: 287 TLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQEL 324


>gi|357493433|ref|XP_003617005.1| Disease resistance protein [Medicago truncatula]
 gi|355518340|gb|AES99963.1| Disease resistance protein [Medicago truncatula]
          Length = 1491

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 143/325 (44%), Gaps = 57/325 (17%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE--------NLLETVG------ 70
           S L  + L GC++LV LP ++     L TL L  C K          N LE +       
Sbjct: 646 SSLKWVNLSGCESLVDLPPSVLCADMLVTLILHRCTKITSVRGEKHLNCLEKISVDGCKS 705

Query: 71  ----QVES--LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
                V S  +E LD+S T I+    SI  ++ LK L+           +C LP  ++ +
Sbjct: 706 LKIFAVSSNLIENLDLSSTGIQTLDLSIGSLEKLKRLNLDSLK-----LNC-LPEGLSSV 759

Query: 125 RRSSDL----GALMLPS------LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
              S+L     AL++          GL SL  L + D  + +  +P++I  L  LK L L
Sbjct: 760 TSISELKISGSALIVEKQLLEELFDGLQSLQILHMKDF-INQFELPNNIHVLSKLKELNL 818

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT---LLGAL 231
             +N   LP SI  L  LE L L +C+ L+ +P+LPP V  +    C SLV+   L G  
Sbjct: 819 DGSNMKRLPESIKKLEELEILSLVNCRELECIPELPPLVTLLNAVNCTSLVSVSNLKGLA 878

Query: 232 KLRKSSCTIIDFVDSLKLLGKN------GLAISMLREFLEVVSAP-------SHKFSIV- 277
            +       I F +SL L G +       L ++M+    + VS         S+ ++ V 
Sbjct: 879 TMMMGKTKHISFSNSLNLDGHSLSLIMENLNLTMMSAVFQNVSVRRLRVKVHSYNYNSVD 938

Query: 278 --VPGSEIPKWFMYQNEG-SSITVT 299
              PG+ IP+ F  Q    SSIT+T
Sbjct: 939 ACRPGTSIPRLFKCQTAADSSITIT 963


>gi|12321343|gb|AAG50739.1|AC079733_7 disease resistance protein RPP1-WsA, putative [Arabidopsis
           thaliana]
          Length = 709

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 17/187 (9%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           LP+LS   +L  L+L  C      +PS IGN  SL  L L K ++ V LP SI  L NL 
Sbjct: 376 LPNLSMATNLKNLNLERCS-SLVELPSSIGNATSLHDLRLFKCSSLVELPFSIGNLTNLW 434

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
           KL L +C  L SLPQLP ++  +    C SL  L  +     +   +++FV+   L   N
Sbjct: 435 KLDLRECSSLVSLPQLPDSIMVLNARNCESLEKLDCSF---YNPGILLNFVNCFNL---N 488

Query: 254 GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
             A  +L      +   +  F +V+PG E+P  F Y++ GSS++V     L  ++    +
Sbjct: 489 QEARDLL------IETSTVNF-VVLPGKEVPACFTYRSHGSSVSVKVNQKL--LHTSTKF 539

Query: 314 AACRVFH 320
            AC +F 
Sbjct: 540 KACILFE 546



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D  ++KE+P ++ + + L  L L+ C +LV LPS+I +  SL  L L  C     L  
Sbjct: 367 LTDSRNLKELP-NLSMATNLKNLNLERCSSLVELPSSIGNATSLHDLRLFKCSSLVELPF 425

Query: 68  TVGQVESLEELDIS--GTAIRCP--PSSIFLM--KNLKTLSFRGCN 107
           ++G + +L +LD+    + +  P  P SI ++  +N ++L    C+
Sbjct: 426 SIGNLTNLWKLDLRECSSLVSLPQLPDSIMVLNARNCESLEKLDCS 471


>gi|242086464|ref|XP_002443657.1| hypothetical protein SORBIDRAFT_08g022995 [Sorghum bicolor]
 gi|241944350|gb|EES17495.1| hypothetical protein SORBIDRAFT_08g022995 [Sorghum bicolor]
          Length = 1143

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 32/236 (13%)

Query: 1   MECLRELL-LDKTD---IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL 56
           ++ LR LL LD +D   +  +P S   L+ L  L L  C  L  LP ++N L+SL  L+L
Sbjct: 443 VKALRSLLHLDLSDSCNLSSLPESFGDLANLSHLNLANCSLLKALPESVNKLRSLLHLDL 502

Query: 57  LGCFKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC 115
            GC    +L E+ G +E+L  L+++  + ++  P S+  +++L  L   GC        C
Sbjct: 503 SGCCNLSSLPESFGDLENLSHLNLTNCSLLKALPESVNKLRSLLHLDLSGCCNL-----C 557

Query: 116 YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            LP                  S   L +LT L+L++C L    +P  +  L  L  L LS
Sbjct: 558 SLP-----------------ESFGDLTNLTDLNLANCVLL-NTLPDSVDKLRDLFCLDLS 599

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
              N  +LP S   + NL  L L +C  L++LP+    ++ +R   ++GC SL +L
Sbjct: 600 GCCNLCSLPESSGDMMNLSHLYLANCSLLKTLPESVHKLKSLRHLDLSGCTSLCSL 655



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 97/218 (44%), Gaps = 29/218 (13%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P S+  L  L+ L L GC NL  LP +   L++L  LNL  C   + L E+V ++ 
Sbjct: 484 LKALPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNLTNCSLLKALPESVNKLR 543

Query: 74  SLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGC---NGPPSSAS--------------- 114
           SL  LD+SG    C  P S   + NL  L+   C   N  P S                 
Sbjct: 544 SLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPDSVDKLRDLFCLDLSGCCN 603

Query: 115 -CYLPFPINLMRRSSDLGAL------MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNL 166
            C LP     M   S L          LP S+  L SL  LDLS C     ++P   G+L
Sbjct: 604 LCSLPESSGDMMNLSHLYLANCSLLKTLPESVHKLKSLRHLDLSGCT-SLCSLPECFGDL 662

Query: 167 HSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRL 203
            +L  L L+K  +  +LP S   LF L+ L L DC RL
Sbjct: 663 INLSHLNLAKCTDLCSLPKSFGRLFELQYLNLSDCLRL 700



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P S+  L  L+ L L GC NL  LP +   L +L  LNL  C     L ++V ++ 
Sbjct: 532 LKALPESVNKLRSLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPDSVDKLR 591

Query: 74  SLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR--RSSDL 130
            L  LD+SG    C  P S   M NL  L    C+   +     LP  ++ ++  R  DL
Sbjct: 592 DLFCLDLSGCCNLCSLPESSGDMMNLSHLYLANCSLLKT-----LPESVHKLKSLRHLDL 646

Query: 131 GALM----LPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   G L +L+ L+L+ C     ++P   G L  L+ L LS    + L   
Sbjct: 647 SGCTSLCSLPECFGDLINLSHLNLAKCT-DLCSLPKSFGRLFELQYLNLSDCLRLDLWFD 705

Query: 186 IN---CLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
           I    CL  L+ L L  C  L  +P+   N++ +
Sbjct: 706 IETVCCLTKLQYLNLSRCPSLMHIPESVINLKNL 739



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 24/202 (11%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLK 99
           +P ++ SL  L  LN+ G  K   L ++V  + SL  LD+S +  +   P S   + NL 
Sbjct: 415 VPEHVTSLSKLMYLNISGSSKISTLPDSVKALRSLLHLDLSDSCNLSSLPESFGDLANLS 474

Query: 100 TLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GALMLPSL----SGLGSLTKLDLSDC 152
            L+   C+   +     LP  +N +R    L   G   L SL      L +L+ L+L++C
Sbjct: 475 HLNLANCSLLKA-----LPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNLTNC 529

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
            L + A+P  +  L SL  L LS   N  +LP S   L NL  L L +C  L +LP    
Sbjct: 530 SLLK-ALPESVNKLRSLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPD--- 585

Query: 212 NVEKVR------VNGCASLVTL 227
           +V+K+R      ++GC +L +L
Sbjct: 586 SVDKLRDLFCLDLSGCCNLCSL 607



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL--LETVGQVESLEELDIS 81
           L  L  L L  C +L  LP +   L  L+ LNL  C + +    +ETV  +  L+ L++S
Sbjct: 662 LINLSHLNLAKCTDLCSLPKSFGRLFELQYLNLSDCLRLDLWFDIETVCCLTKLQYLNLS 721

Query: 82  GTAIRCP-----PSSIFLMKNLKTLSFRGCN 107
               RCP     P S+  +KNL TL    C+
Sbjct: 722 ----RCPSLMHIPESVINLKNLHTLDLSRCH 748


>gi|20198191|gb|AAD25848.3| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 554

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 28/236 (11%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + + E+P SI   + L++L L GC +L+ LPS+I +  +L+T++   C     L  ++G 
Sbjct: 47  SSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGN 106

Query: 72  VESLEELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASC------YLPFP 120
             +L+ELD+S  ++++  PSSI    NLK L    C+     P S  +C      +L   
Sbjct: 107 ATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCC 166

Query: 121 INLMRRSSDLG-ALMLPSL------------SGLGSLTKLDLSDCGLGEGAI--PSDIGN 165
            +L++  S +G A+ L  L            S +G  T L + + G     +  PS IGN
Sbjct: 167 SSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGN 226

Query: 166 LHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
           LH L  L L        LP +IN  F L +L L DC  L++ P +  N++++ + G
Sbjct: 227 LHKLSELRLRGCKKLQVLPTNINLEF-LNELDLTDCILLKTFPVISTNIKRLHLRG 281



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 104/212 (49%), Gaps = 29/212 (13%)

Query: 21  IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDI 80
           I+ L  L ++ L   KNL  LP +++S  +L+ LNL GC     L  ++G    L +L++
Sbjct: 9   IQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLEL 67

Query: 81  SG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           SG +++   PSSI    NL+T+ F  C               NL+   S +G        
Sbjct: 68  SGCSSLLELPSSIGNAINLQTIDFSHCE--------------NLVELPSSIG-------- 105

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNFVTLPASINCLFNLEKLKLE 198
              +L +LDLS C      +PS IGN  +LK L+L   ++   LP+SI    NL++L L 
Sbjct: 106 NATNLKELDLSCCS-SLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLT 164

Query: 199 DCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
            C  L  LP       N+EK+ + GC SLV L
Sbjct: 165 CCSSLIKLPSSIGNAINLEKLILAGCESLVEL 196



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 145/336 (43%), Gaps = 68/336 (20%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +KE+P SI   + L +L L  C +L  LPS+I +  +LK L+L  C     L  ++G 
Sbjct: 119 SSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGN 178

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--INLMRRSS 128
             +LE+L ++G  ++   PS I    NLK L+           SC +  P  I  + + S
Sbjct: 179 AINLEKLILAGCESLVELPSFIGKATNLKILNL-------GYLSCLVELPSFIGNLHKLS 231

Query: 129 DL------GALMLPSLSGLGSLTKLDLSDCGLGEG--AIPSDIGNLH------------- 167
           +L         +LP+   L  L +LDL+DC L +    I ++I  LH             
Sbjct: 232 ELRLRGCKKLQVLPTNINLEFLNELDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSL 291

Query: 168 -------SLKTLY------------------LSKNNFVTLPASINCLFNLEKLKLEDCKR 202
                   L+ LY                  LS  N   +   +N +  L +LKL  C +
Sbjct: 292 RSWPRLEDLQMLYSENLSEFSHVLERITVLELSDINIREMTPWLNRITRLRRLKLSGCGK 351

Query: 203 LQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE 262
           L SLPQL  ++  +    C SL  L  +       C  +DF + LKL  +        R+
Sbjct: 352 LVSLPQLSDSLIILDAENCGSLERLGCSFNNPNIKC--LDFTNCLKLDKEA-------RD 402

Query: 263 FLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
              ++ A +  +SI +P  E+ ++   +  GSS+TV
Sbjct: 403 L--IIQATARHYSI-LPSREVHEYITNRAIGSSLTV 435



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 93/217 (42%), Gaps = 34/217 (15%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L    ++KE+P  +   + L  L L GC +LV LP +I +   L  L L GC     L  
Sbjct: 20  LFSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPS 78

Query: 68  TVGQVESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPIN 122
           ++G   +L+ +D S        PSSI    NLK L    C+     P S  +C       
Sbjct: 79  SIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGNC------- 131

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS-KNNFVT 181
                ++L  L L   S L  L               PS IGN  +LK L+L+  ++ + 
Sbjct: 132 -----TNLKKLHLICCSSLKEL---------------PSSIGNCTNLKELHLTCCSSLIK 171

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           LP+SI    NLEKL L  C+ L  LP        +++
Sbjct: 172 LPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKI 208


>gi|404363520|gb|AFR66724.1| AT5G17680-like protein, partial [Capsella grandiflora]
          Length = 181

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 26/166 (15%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS---ASCYLPFPINLM 124
            +G + +LE L  S T IR  P SI  +  L+ L+    +  P     ++C         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAIGNSSFTPEGLLHSAC--------- 51

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                      P LS    L  L LS+  + E  IP+ IGNL +L  L LS NNF  +PA
Sbjct: 52  -----------PPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNNFKFVPA 98

Query: 185 SINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
           S   L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 99  SFKRLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|357486935|ref|XP_003613755.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515090|gb|AES96713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 790

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 20/237 (8%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L++L LD   ++ E+  S+  L  L  L L  C +L  LP  IN L SLKT++   C   
Sbjct: 411 LKKLHLDSFKNLVEVHDSVGFLGKLEDLNLNRCTSLRVLPHGIN-LPSLKTMSFRNCASL 469

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           ++  E +G++E+   L +S T I   P SI L++ L TL+   C          LP  I 
Sbjct: 470 KSFPEILGKMENTTYLGLSDTGISELPFSIGLLEGLATLTIDRCK-----ELLELPSSIF 524

Query: 123 LMRRSSDLGALMLPSLSGL-------------GSLTKLDLSDCGLGEGAIPSDIGNLHSL 169
           ++ +   L A     L+ +             G+ + +D + C L +  + + +  LH +
Sbjct: 525 MLPKLETLEAYSCKDLARIKKCKGQVHETMYSGAKSVVDFNFCHLSDEFLATLLPCLHYV 584

Query: 170 KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
           + L L       LP+ IN   +L++L   +C  L+ +  LPPN++ +    C SL +
Sbjct: 585 RNLSLDYIIITILPSCINECHSLKELTFNNCMELREIRGLPPNIKHISAINCTSLTS 641


>gi|108738432|gb|ABG00749.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|108738448|gb|ABG00757.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|108738478|gb|ABG00772.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738524|gb|ABG00795.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 20/234 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L S++ L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSSMRILN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL ++
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPWKLEQLNLENCFSLESI 529



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|255555357|ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542096|gb|EEF43640.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 161/361 (44%), Gaps = 50/361 (13%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL----------- 56
            L D  +++E+  SI+ L+ L  L L  C  L RLP  I+S K LK L L           
Sbjct: 679  LSDCDNLEEVHSSIQYLNKLEFLNLWHCNKLRRLPRRIDS-KVLKVLKLGSTRVKRCPEF 737

Query: 57   ---------LGCFKFENLLETVGQVESLEELDISGTAIRCP-----PSSIFLMKNLKTLS 102
                     L C   +N+  TV  + +   L +     RC      PSS + +K+LK+L 
Sbjct: 738  QGNQLEDVFLYCPAIKNVTLTVLSILNSSRL-VHLFVYRCRRLSILPSSFYKLKSLKSLD 796

Query: 103  FRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGA 158
               C+     P      Y  F I+ M    +L +    S+S L SLT L+L+  G     
Sbjct: 797  LLHCSKLESFPEILEPMYNIFKID-MSYCRNLKSFP-NSISNLISLTYLNLA--GTAIKQ 852

Query: 159  IPSDIGNLHSLKTLYLSKNNFV-TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            +PS I +L  L  L L    ++ +LP SI  L  LE++ L  C+ L SLP+LP +++K+R
Sbjct: 853  MPSSIEHLSQLDFLDLKDCKYLDSLPVSIRELPQLEEMYLTSCESLHSLPELPSSLKKLR 912

Query: 218  VNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV 277
               C SL  +     L +++     F + L+ L +    I+ LR    V      +  ++
Sbjct: 913  AENCKSLERVTSYKNLGEAT-----FANCLR-LDQKSFQITDLR----VPECIYKERYLL 962

Query: 278  VPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF-YRYPH 336
             PGSE+P  F  Q+ GSS+T+       N       A C VF   K S  +    YR  +
Sbjct: 963  YPGSEVPGCFSSQSMGSSVTMQSS---LNEKLFKDAAFCVVFEFKKSSDCVFEVRYREDN 1019

Query: 337  P 337
            P
Sbjct: 1020 P 1020


>gi|108738440|gb|ABG00753.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738454|gb|ABG00760.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738468|gb|ABG00767.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738484|gb|ABG00775.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738486|gb|ABG00776.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738488|gb|ABG00777.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738490|gb|ABG00778.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738496|gb|ABG00781.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738520|gb|ABG00793.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738526|gb|ABG00796.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738530|gb|ABG00798.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738537|gb|ABG00801.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738539|gb|ABG00802.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738545|gb|ABG00805.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738551|gb|ABG00808.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|295830833|gb|ADG39085.1| AT5G17680-like protein [Capsella grandiflora]
          Length = 183

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 85/172 (49%), Gaps = 26/172 (15%)

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS---ASCYLP 118
            + L E +G + +LE L  S T IR  P SI  +  L+ L+    +  P     ++C   
Sbjct: 28  IKELPENIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAIGNSSXTPEGLLHSAC--- 84

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
                            P LS    L  L LS+  + E  IP+ IGNL +L  L LS NN
Sbjct: 85  -----------------PPLSRFDDLRALSLSNMNMIE--IPNSIGNLWNLLELDLSGNN 125

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
           F  +PASI  L  L +L L +C+RLQ+LP +L   +  + ++GC SLV++ G
Sbjct: 126 FKFVPASIKRLTKLNRLNLNNCQRLQALPDELXRGLLYIYIHGCTSLVSISG 177


>gi|108738442|gb|ABG00754.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|108738562|gb|ABG00813.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRG--CNGPPSSASC--------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +    +  P S            L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGXXXNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 40/216 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-- 250

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS-------- 112
                        ++EEL +        PSS+  + +      +     PSS        
Sbjct: 251 ------------SAVEELPLK-------PSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLL 291

Query: 113 ASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
                  PI  +    ++GAL          + +L+L +C   +  +P  IG++ +L +L
Sbjct: 292 QLQLSSTPIEAL--PEEIGALHF--------IRELELRNCKFLK-FLPKSIGDMDTLYSL 340

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            L  +N   LP     L  L +L++ +CK L+ LP+
Sbjct: 341 NLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376


>gi|108738464|gb|ABG00765.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738466|gb|ABG00766.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSQLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|108738549|gb|ABG00807.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|108738506|gb|ABG00786.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRR- 126
           +E L EL +S    ++  P S   +K+L  L  +       P S  +      + ++++ 
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESXGNLSXLMVLEMLKKP 416

Query: 127 ------------SSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                       S +   + +P S S L  L  LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEALDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 40/216 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-- 250

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS-------- 112
                        ++EEL +        PSS+  + +      +     PSS        
Sbjct: 251 ------------SAVEELPLK-------PSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLL 291

Query: 113 ASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
                  PI  +    ++GAL          + +L+L +C   +  +P  IG++ +L +L
Sbjct: 292 QLQLSSTPIEAL--PEEIGALHF--------IRELELRNCKFLK-FLPKSIGDMDTLYSL 340

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            L  +N   LP     L  L +L++ +CK L+ LP+
Sbjct: 341 NLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376


>gi|351723127|ref|NP_001236756.1| candidate disease-resistance protein SR1 [Glycine max]
 gi|37780302|gb|AAO92748.1| candidate disease-resistance protein SR1 [Glycine max]
          Length = 1137

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 162/423 (38%), Gaps = 63/423 (14%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
            S+  L+ L +L+  GC+ L   P    +L SL+ L + GC   E   E +G++  +  L+
Sbjct: 668  SVGFLNKLKKLSAYGCRKLTSFPPL--NLTSLRRLQISGCSSLEYFPEILGEMVKIRVLE 725

Query: 80   ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
            +    I+  P S   +  L  L  R C       S  +   +++ R  +      + S  
Sbjct: 726  LHDLPIKELPFSFQNLIGLSRLYLRRCRIVQLRCSLAMMSKLSVFRIENCNKWHWVESEE 785

Query: 140  G---LGSLT---KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
            G   +G+L    +    +C L +    +       +  L LS NNF  LP     L  L 
Sbjct: 786  GEETVGALWWRPEFSAKNCNLCDDFFLTGFKRFAHVGYLNLSGNNFTILPEFFKELKFLR 845

Query: 194  KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
             L + DC+ LQ +  LPPN++  R   CASL +   ++ L +                  
Sbjct: 846  TLDVSDCEHLQKIRGLPPNLKDFRAINCASLTSSSKSMLLNQ------------------ 887

Query: 254  GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVT-RPSY----LCNMN 308
                       E+  A   KF  + PG+ IP+WF  Q+ G S +   R  +    LC + 
Sbjct: 888  -----------ELYEAGGTKF--MFPGTRIPEWFNQQSSGHSSSFWFRNKFPAKLLCLLI 934

Query: 309  QVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRGS------DHLWLLYL 362
              V      +F  PK S G    +  P+P   ++      +G          DH ++  L
Sbjct: 935  APVSVPLYSLF-PPKVSFG----HHVPYPKVFINGKCQAFWGCHWKQRMMELDHTYIFDL 989

Query: 363  PRQSY-----YCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEE 417
             +  +     +    W  E NH  + +    E       G+G+ + R     G M E   
Sbjct: 990  QKLPFENDNLFEEGAWEEEWNHVEVRYESVLELESSLIKGSGIHIFR---EEGSMEEDIR 1046

Query: 418  FDE 420
            FD+
Sbjct: 1047 FDD 1049


>gi|78048776|ref|YP_364951.1| hypothetical protein XCV3220 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037206|emb|CAJ24951.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 660

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 103/224 (45%), Gaps = 41/224 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 228 LQHMTIDAAGLMELPDTMQQFAGLETLTL--ARNPLRALPASIASLNRLRELSIRACPEL 285

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T IR  P+SI  ++NLK+L  R         
Sbjct: 286 TELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIR--------- 336

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                        +S L AL  P++  L  L +LDL  C       P   G    LK L 
Sbjct: 337 -------------NSPLSALG-PAIHHLPKLEELDLRGCTALRN-YPPIFGGRAPLKRLI 381

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP----QLPPN 212
           L   +N +TLP  I+ L  LEKL L  C  L  LP    QLP N
Sbjct: 382 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 425


>gi|356524185|ref|XP_003530712.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 882

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 20/173 (11%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + L + V  + +L+E+D+S +       ++   +NL+++S  GC              
Sbjct: 677 KLKKLWDGVQNLVNLKEIDLSYSEDLIEIPNLSEAENLESISLSGCKSLH---------- 726

Query: 121 INLMRRSSDLGALMLPSLSGLGS-------LTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
             L   S  L A+ L   S L         +TKL+LS   + E  + S IG+L SL+ LY
Sbjct: 727 -KLHVHSKSLRAMELDGCSSLKEFSVTSEKMTKLNLSYTNISE--LSSSIGHLVSLEKLY 783

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
           L   N  +LPA+I  L  L  L+L+ C++L SLP+LPP++  + +NGC  L++
Sbjct: 784 LRGTNVESLPANIKNLSMLTSLRLDGCRKLMSLPELPPSLRLLDINGCKKLMS 836



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E + +L L  T+I E+  SI  L  L +L L+G  N+  LP+NI +L  L +L L GC K
Sbjct: 754 EKMTKLNLSYTNISELSSSIGHLVSLEKLYLRGT-NVESLPANIKNLSMLTSLRLDGCRK 812

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPS 90
             +L E      SL  LDI+G      PS
Sbjct: 813 LMSLPEL---PPSLRLLDINGCKKLMSPS 838


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 32/232 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L+L+ T IK +P SI  L  L  L L  C+ L +LP  +  L++L+ LNL    
Sbjct: 104 LQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQ-LQQLPEGLGQLQALEALNL-SAN 161

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL-------SFRGCNGPPSSA 113
           + E L  ++GQ+++L+  D+S   ++  P+    +  L+ L       SF   N     A
Sbjct: 162 QLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLVA 221

Query: 114 SCYLPFPINLMRR-----------------SSDLGALMLPSLSG-LGSLTKLDLSDCGLG 155
              L    N + +                  +DLG   LP+  G L SL +LDLSD  L 
Sbjct: 222 LKTLVLAENQLDQLPASLGQLKQLELLELQDNDLG--QLPAQIGQLQSLVELDLSDNFLQ 279

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           +  +P +IG L +LK+L++++N    LPA    L NL++L+L++ K L +LP
Sbjct: 280 Q--LPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENK-LTALP 328



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 25/164 (15%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           + L  LP+ I     L+ L+L G    E L E +GQ+++LE L ++ T I+  P+SI  +
Sbjct: 68  EELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQL 127

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
           +NL+ L    C                L +    LG L         +L  L+LS   L 
Sbjct: 128 QNLRILDLGNC---------------QLQQLPEGLGQLQ--------ALEALNLSANQLE 164

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
           E  +P  IG L +LK   LS N    LP   + L  LE+L LE+
Sbjct: 165 E--LPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALEN 206


>gi|108738541|gb|ABG00803.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|240254292|ref|NP_176078.4| ATP binding protein [Arabidopsis thaliana]
 gi|332195326|gb|AEE33447.1| ATP binding protein [Arabidopsis thaliana]
          Length = 709

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 17/187 (9%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           LP+LS   +L  L+L  C      +PS IGN  SL  L L K ++ V LP SI  L NL 
Sbjct: 376 LPNLSMATNLKNLNLERCS-SLVELPSSIGNATSLHDLRLFKCSSLVELPFSIGNLTNLW 434

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
           KL L +C  L SLPQLP ++  +    C SL  L  +     +   +++FV+   L   N
Sbjct: 435 KLDLRECSSLVSLPQLPDSIMVLNARNCESLEKLDCSF---YNPGILLNFVNCFNL---N 488

Query: 254 GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
             A  +L      +   +  F +V+PG E+P  F Y++ GSS++V     L  ++    +
Sbjct: 489 QEARDLL------IETSTVNF-VVLPGKEVPACFTYRSHGSSVSVKVNQKL--LHTSTKF 539

Query: 314 AACRVFH 320
            AC +F 
Sbjct: 540 KACILFE 546



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D  ++KE+P ++ + + L  L L+ C +LV LPS+I +  SL  L L  C     L  
Sbjct: 367 LTDSRNLKELP-NLSMATNLKNLNLERCSSLVELPSSIGNATSLHDLRLFKCSSLVELPF 425

Query: 68  TVGQVESLEELDIS--GTAIRCP--PSSIFLM--KNLKTLSFRGCN 107
           ++G + +L +LD+    + +  P  P SI ++  +N ++L    C+
Sbjct: 426 SIGNLTNLWKLDLRECSSLVSLPQLPDSIMVLNARNCESLEKLDCS 471


>gi|108738560|gb|ABG00812.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 107/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L  LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYILNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 47/232 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG------------LGSLT 145
           ++ L  R C         +L F   L +   D+  L + +L G            L  L 
Sbjct: 313 IRELELRNCK--------FLKF---LPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLV 361

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           +L +S+C + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 362 ELRMSNCKMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|108738450|gb|ABG00758.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738472|gb|ABG00769.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738510|gb|ABG00788.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738522|gb|ABG00794.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|334183389|ref|NP_001185254.1| ATP binding protein [Arabidopsis thaliana]
 gi|332195327|gb|AEE33448.1| ATP binding protein [Arabidopsis thaliana]
          Length = 676

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 17/187 (9%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           LP+LS   +L  L+L  C      +PS IGN  SL  L L K ++ V LP SI  L NL 
Sbjct: 376 LPNLSMATNLKNLNLERCS-SLVELPSSIGNATSLHDLRLFKCSSLVELPFSIGNLTNLW 434

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKN 253
           KL L +C  L SLPQLP ++  +    C SL  L  +     +   +++FV+   L   N
Sbjct: 435 KLDLRECSSLVSLPQLPDSIMVLNARNCESLEKLDCSF---YNPGILLNFVNCFNL---N 488

Query: 254 GLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGY 313
             A  +L      +   +  F +V+PG E+P  F Y++ GSS++V     L  ++    +
Sbjct: 489 QEARDLL------IETSTVNF-VVLPGKEVPACFTYRSHGSSVSVKVNQKL--LHTSTKF 539

Query: 314 AACRVFH 320
            AC +F 
Sbjct: 540 KACILFE 546



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D  ++KE+P ++ + + L  L L+ C +LV LPS+I +  SL  L L  C     L  
Sbjct: 367 LTDSRNLKELP-NLSMATNLKNLNLERCSSLVELPSSIGNATSLHDLRLFKCSSLVELPF 425

Query: 68  TVGQVESLEELDIS--GTAIRCP--PSSIFLM--KNLKTLSFRGCN 107
           ++G + +L +LD+    + +  P  P SI ++  +N ++L    C+
Sbjct: 426 SIGNLTNLWKLDLRECSSLVSLPQLPDSIMVLNARNCESLEKLDCS 471


>gi|104647648|gb|ABF74392.1| disease resistance protein [Arabidopsis lyrata]
          Length = 483

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 30/226 (13%)

Query: 4   LRELLLDKTDI-KEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+L++ ++  ++P S+  L  L+QL L+ C NL     +++ LK L+ L L GC   
Sbjct: 1   LEKLVLERCNLLVKVPRSVGNLRKLLQLDLRRCSNLSEFLVDVSGLKCLEKLFLSGCSNL 60

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             L E +G +  L+EL + GTAI   P SIF ++ L+ LS  GC       +C       
Sbjct: 61  SVLPENIGSMPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPTC------- 113

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
                          +  L SL  L L D  L    +P+ IG+L +L+ L+L +  +   
Sbjct: 114 ---------------IGKLTSLEDLYLDDTALRN--LPNSIGDLKNLQKLHLMRCTSLSK 156

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKVRVNGCASL 224
           +P SIN L +L+KL +     ++ LP  P   P++      GC  L
Sbjct: 157 IPDSINELISLKKLFITG-SAVEELPLKPSSLPSLTDFSAGGCKFL 201



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 26/220 (11%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  +  L  L L+G  N+  LP     L++L  L +  C   + L E+ G ++
Sbjct: 248 LKFLPKSIGDMDTLCSLNLEG-SNIEELPEEFGKLENLVELRMSNCTMLKRLPESFGDLK 306

Query: 74  SLEELDISGTAIRCPPSS------IFLMKNLKTLSFR--GCNGPPSSASC-YLPFPINLM 124
           SL  L +  T +   P S      + +++ LK   FR    N P +S    ++  P    
Sbjct: 307 SLHHLYMKETLVSELPESFGNLSKLMVLEMLKNPLFRISESNAPGTSEEPRFVEVP---- 362

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                       S S L SL +LD     +  G IP D+  L SL  L L  N F +LP+
Sbjct: 363 -----------NSFSNLTSLEELDARSWRIS-GKIPDDLEKLSSLMKLNLGNNYFHSLPS 410

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           S+  L NL++L L DC+ L+ LP LP  +E + +  C SL
Sbjct: 411 SLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSL 450



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 25/232 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN----------------------- 37
           M CL+ELLLD T I  +P SI  L  L +L+L GC++                       
Sbjct: 70  MPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTSLEDLYLDDTA 129

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LP++I  LK+L+ L+L+ C     + +++ ++ SL++L I+G+A+   P     + +
Sbjct: 130 LRNLPNSIGDLKNLQKLHLMRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPSSLPS 189

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGE 156
           L   S  GC       S        L  + +      LP  +  L  + KL+L +C   +
Sbjct: 190 LTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELMNCEFLK 249

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             +P  IG++ +L +L L  +N   LP     L NL +L++ +C  L+ LP+
Sbjct: 250 -FLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRLPE 300


>gi|108738434|gb|ABG00750.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738436|gb|ABG00751.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738438|gb|ABG00752.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738446|gb|ABG00756.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738452|gb|ABG00759.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738460|gb|ABG00763.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738492|gb|ABG00779.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738494|gb|ABG00780.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738528|gb|ABG00797.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|418745448|ref|ZP_13301788.1| putative molybdate metabolism regulator MolR [Leptospira santarosai
            str. CBC379]
 gi|410793910|gb|EKR91825.1| putative molybdate metabolism regulator MolR [Leptospira santarosai
            str. CBC379]
          Length = 1610

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 28/251 (11%)

Query: 6    ELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
            EL LD T  +  P ++     L  L+++ C N   +P +I +LK L  LNL G  K   L
Sbjct: 1214 ELYLDSTKFERFPTAVSTFKSLTSLSMRDC-NFTEIPESIGNLKRLTDLNL-GKNKLSAL 1271

Query: 66   LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
               +G++E L  L +        P ++  +KNL+ L  R       +    LP  I  M 
Sbjct: 1272 PAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLQLLWIRW------NQIVSLPDGIGQMS 1325

Query: 126  RSSDLGALMLPSLSGLGS-LTKL-DLSDCGLGEGAI---PSDIGNLHSLKTLYLSKNNFV 180
               DL +L    LS + S ++K+  L+D  LG+      P  +  + +L+ L LS+N   
Sbjct: 1326 SLKDL-SLHENQLSDVPSGISKMPQLADLKLGKNKFTKFPEAVTLIKNLRILDLSENQIT 1384

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTI 240
            ++P SI  +  LE L LED      +  LP  +EK+           L  ++L+K+    
Sbjct: 1385 SIPDSIGAISTLEVLDLEDL----PINSLPAQLEKLEA---------LTDIRLQKTKLKD 1431

Query: 241  I-DFVDSLKLL 250
            + DF+ S+K L
Sbjct: 1432 VPDFLASMKSL 1442



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 33/183 (18%)

Query: 28   VQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL---ETVGQVESLEELDISGTA 84
            ++L+    K+LV L    NS   L+ + L     FE+     E + + ++  EL +  T 
Sbjct: 1166 IELSEWNVKDLVVL----NSCTGLEEVELRDIQGFESDFDCSELLSESKAKIELYLDSTK 1221

Query: 85   IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
                P+++   K+L +LS R CN        +   P                S+  L  L
Sbjct: 1222 FERFPTAVSTFKSLTSLSMRDCN--------FTEIP---------------ESIGNLKRL 1258

Query: 145  TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
            T L+L    L   A+P+ IG L  L  LYL  N F   P ++  L NL+ L +    ++ 
Sbjct: 1259 TDLNLGKNKLS--ALPAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLQLLWIR-WNQIV 1315

Query: 205  SLP 207
            SLP
Sbjct: 1316 SLP 1318


>gi|108738556|gb|ABG00810.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L  LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYILNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 47/232 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG------------LGSLT 145
           ++ L  R C         +L F   L +   D+  L + +L G            L  L 
Sbjct: 313 IRELELRNCK--------FLKF---LPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLV 361

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           +L +S+C + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 362 ELRMSNCKMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|421122075|ref|ZP_15582361.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410344842|gb|EKO95985.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 348

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 5/206 (2%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            +REL LD  D+K     I  L  L +L   G KNL   P  I  L +LK LNL G  + 
Sbjct: 19  LVRELALDSFDLKSFTEEIVKLQNLERLIFNG-KNLKNFPKTITKLHNLKELNL-GRNQI 76

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +L E +G++++L+ELD++   +   P  I  +KNL+ L+  G           LP  + 
Sbjct: 77  SSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLK 136

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           ++  S +        +  L +L  LD S+  L E  +P  +G L +L  LYL  N    L
Sbjct: 137 ILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKE--LPEKLGQLQNLNILYLLGNELKVL 194

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ 208
           P+S +   +L+ L L +  R Q  P+
Sbjct: 195 PSSFSEFRSLKSLNL-NYNRFQVFPK 219



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 27/221 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L+   +  +P+ I  L  L  LTL G + +  LP + +  ++LK L  L   
Sbjct: 86  LQNLKELDLNNNQLTSLPVEIGNLKNLEILTLYGNQ-ISVLPKDFSLPQNLKIL-YLSQN 143

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL---------------SFRG 105
           KF    + + Q+++LE LD S   ++  P  +  ++NL  L                FR 
Sbjct: 144 KFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRS 203

Query: 106 CNGPPSSASCYLPFPINL--------MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
                 + + +  FP  L        +  + +    +   +  L +L  L L    L + 
Sbjct: 204 LKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQ- 262

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
            +P +IG L +L++LYL +N   TLP  I  L NL++L L+
Sbjct: 263 -LPQNIGKLQNLESLYLQENQLTTLPEEIGSLQNLKELYLQ 302


>gi|168052882|ref|XP_001778868.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669737|gb|EDQ56318.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 532

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 20/234 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  LS L++L L GC +L  LP+ + +L SLK LNL GC    +L   +  
Sbjct: 135 SSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLNLSGCSSLISLPNELAN 194

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRS 127
           + SL+EL ++G  ++   P+ +  + +LK L    C      P+  + YL   I L    
Sbjct: 195 ISSLDELYLNGCLSLISLPNELANLSSLKKLYLNNCFSLTRLPNKLA-YLSSLIEL---- 249

Query: 128 SDLGA----LMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
            DLG       LP+ L+ L SL +L+LS C       P++  NL SLK L+LS  ++  +
Sbjct: 250 -DLGGCSSLTSLPNELANLSSLKRLNLSGCS-NLTRSPNEFANLSSLKKLHLSGCSSLTS 307

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTLLGALK 232
           LP  +  + +L++L L  C  L SLP    N+    ++ +N C+SL +L   L+
Sbjct: 308 LPNELANISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDCSSLTSLQNKLE 361



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 34/236 (14%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +   P  +E LS L  + LK C NL RLP+ + +L  L+ L+L GC    +L   +  
Sbjct: 15  SSLISFPNELENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLSGCSSLTSLPNELAN 74

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           + SL  LD+SG +     S I L+  L  +S        S    YL    NL R  + L 
Sbjct: 75  LSSLTRLDLSGCS-----SLIILLNELANIS--------SLKKLYLNNCSNLTRLPNKLT 121

Query: 132 ALM---------------LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            L                LP+ L+ L SL +LDL  C L   ++P+++ NL SLK L LS
Sbjct: 122 KLFSLEGIFLHHCSSLTSLPNELAHLSSLIELDLGGC-LSLTSLPNELANLSSLKKLNLS 180

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
             ++ ++LP  +  + +L++L L  C  L SLP    N   ++K+ +N C SL  L
Sbjct: 181 GCSSLISLPNELANISSLDELYLNGCLSLISLPNELANLSSLKKLYLNNCFSLTRL 236



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 27/201 (13%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  LS L +L L GC NL R P+   +L SLK L+L GC    +L   +  
Sbjct: 255 SSLTSLPNELANLSSLKRLNLSGCSNLTRSPNEFANLSSLKKLHLSGCSSLTSLPNELAN 314

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL+EL +SG +++   P+ +  + +L  L    C                     S L
Sbjct: 315 ISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDC---------------------SSL 353

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL--YLSK-NNFVTLPASIN 187
            +L    L  L SL +L+LS C      +P ++ N  SL  L   LS  +N ++LP  + 
Sbjct: 354 TSLQ-NKLENLSSLKELNLSGCS-NLTNLPKELANFSSLTRLKHNLSGCSNLISLPNELE 411

Query: 188 CLFNLEKLKLEDCKRLQSLPQ 208
            L +LE L L  C  L SLP 
Sbjct: 412 NLSSLEDLNLSGCSSLTSLPN 432



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 119/231 (51%), Gaps = 24/231 (10%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +++  +P  +  LS L +L L GC +L  LP+ + +L SL  L+L GC     LL  +  
Sbjct: 39  SNLTRLPNKLTNLSVLEELDLSGCSSLTSLPNELANLSSLTRLDLSGCSSLIILLNELAN 98

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS-- 128
           + SL++L ++  + +   P+ +  + +L+ +    C+   S        P  L   SS  
Sbjct: 99  ISSLKKLYLNNCSNLTRLPNKLTKLFSLEGIFLHHCSSLTS-------LPNELAHLSSLI 151

Query: 129 --DLGALM----LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFV 180
             DLG  +    LP+ L+ L SL KL+LS C     ++P+++ N+ SL  LYL+   + +
Sbjct: 152 ELDLGGCLSLTSLPNELANLSSLKKLNLSGCS-SLISLPNELANISSLDELYLNGCLSLI 210

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQ----LPPNVEKVRVNGCASLVTL 227
           +LP  +  L +L+KL L +C  L  LP     L   +E + + GC+SL +L
Sbjct: 211 SLPNELANLSSLKKLYLNNCFSLTRLPNKLAYLSSLIE-LDLGGCSSLTSL 260



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 27/209 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL--NLLGCFK 61
           LR  L D + +  +   +E LS L +L L GC NL  LP  + +  SL  L  NL GC  
Sbjct: 343 LRLDLNDCSSLTSLQNKLENLSSLKELNLSGCSNLTNLPKELANFSSLTRLKHNLSGCSN 402

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +L   +  + SLE+L++SG +++   P+    + NL   SF        S+   LP  
Sbjct: 403 LISLPNELENLSSLEDLNLSGCSSLTSLPNE---LANLS--SFERLYLSSCSSLTSLP-- 455

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                            L+ L SL +L LS C     ++P+ + NL SLK LY +  ++ 
Sbjct: 456 ---------------NELANLSSLERLYLSGCS-SLTSLPNGLENLSSLKVLYFNGYSSL 499

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            +LP  +  L +L+K  L +C  L SLP 
Sbjct: 500 TSLPNKLANLSSLKKFYLNNCSSLTSLPN 528


>gi|356561802|ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 72/313 (23%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF----------------- 62
            I  L  LV+LT + C+NLV +  ++  L  LK L+  GC K                  
Sbjct: 651 DISSLQNLVKLTFECCENLVAIHDSVGFLDKLKILSAFGCGKLMSFPPIKLISLEQLDLS 710

Query: 63  -----ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
                E+  E +G++E++ +L++  T ++  P S   +  L+ L    C       +  L
Sbjct: 711 SCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVDC------GNVQL 764

Query: 118 PFPINLMRRSSDLGAL-----MLP-------SLSGLGS-LTKLDLSDCGLGEGAIPSDIG 164
           P  I ++   + + AL     +LP        +S + S +  L LS C L +   P  + 
Sbjct: 765 PISIVMLPELAQIFALGCKGLLLPKQDKDEEEVSSMSSNVNCLCLSGCNLSDEYFPMVLA 824

Query: 165 NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
              ++K L LS NNF  LP  I    +L  L L++C+ LQ +  +PPN+E      C SL
Sbjct: 825 WFSNVKELELSCNNFTFLPECIKECHSLILLNLDNCEHLQEIRGIPPNLEYFSAGNCKSL 884

Query: 225 VTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIP 284
                A+ L +              L + G  +  L                  PG+  P
Sbjct: 885 SFCCTAMLLNQE-------------LHETGNTMFCL------------------PGTRSP 913

Query: 285 KWFMYQNEGSSIT 297
           +WF  Q+ G S++
Sbjct: 914 EWFEQQSIGPSLS 926


>gi|297825393|ref|XP_002880579.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297326418|gb|EFH56838.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1158

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 137/329 (41%), Gaps = 67/329 (20%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L  L LD T+I ++P +I  L  L+ L LK CK L  LP  +  LK+L+ L L GC +  
Sbjct: 733  LEYLHLDGTEITDLPQTIVELQRLIVLNLKDCKMLDTLPDCLGKLKALEELILSGCSRLR 792

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            +  E    +E+L+ L + GT IR          +L  +  R  N             +NL
Sbjct: 793  SFPEIKDNMENLQILLLDGTKIR----------DLPKILLRCANSVDQ---------MNL 833

Query: 124  MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
             R          PS+SGL  L +                                 ++L 
Sbjct: 834  QRS---------PSMSGLSLLRR------------------------LCLSRNEMIISLQ 860

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL-----RKSSC 238
            +SI+ L++L+ + L+ C +LQS+  LPPN++ +  + C SL T+   L       +  S 
Sbjct: 861  SSISDLYHLKWIDLKYCTKLQSISMLPPNLQCLDAHDCTSLKTVASPLARPLATEQVPSS 920

Query: 239  TIIDFVDSLKLLGKNGLAI------SMLREFLEVVSAPSHKFSIVV---PGSEIPKWFMY 289
             I      L+   KN +         +L + L   +      ++V    PGSE+P WF +
Sbjct: 921  FIFTNCQKLEHAAKNEITCYGHNKGRLLSKTLNRHNKGLCFEALVATCFPGSEVPDWFGH 980

Query: 290  QNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            ++ G+ +    P +    N  VG A C +
Sbjct: 981  KSSGAVLEPELPRHWSE-NGFVGIALCAI 1008



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           D+K+ P        L  + L     L+ L S +   +SL+ LNL GC   E   +  G +
Sbjct: 635 DVKDTP-------NLKWVDLSHSTKLIDL-SALWKAESLERLNLEGCTNLELFPKDEGNM 686

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKN---LKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           +SL  L++ G T++   P     M+N   LKTL   GC       + +  F +    +S 
Sbjct: 687 KSLAFLNLRGCTSLSFLPE----MENFDCLKTLILSGC-------TSFEDFQV----KSK 731

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASIN 187
           +L  L L            +++D       +P  I  L  L  L L     + TLP  + 
Sbjct: 732 NLEYLHLDG---------TEITD-------LPQTIVELQRLIVLNLKDCKMLDTLPDCLG 775

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            L  LE+L L  C RL+S P++  N+E +++
Sbjct: 776 KLKALEELILSGCSRLRSFPEIKDNMENLQI 806


>gi|224127258|ref|XP_002329439.1| predicted protein [Populus trichocarpa]
 gi|222870489|gb|EEF07620.1| predicted protein [Populus trichocarpa]
          Length = 321

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 8/182 (4%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           + SL  L LS  G+ E  IPS   ++ SL TL L       LP SI     LE L L   
Sbjct: 1   MESLQHLYLSKTGIKE--IPSSFKHMISLITLKLDGTPIKELPLSIKDKVCLEYLTLHGT 58

Query: 201 KRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISML 260
             +++LP+LPP++  +  + CASL T++  + +  S     DF +  KL  +  L  +M 
Sbjct: 59  P-IKALPELPPSLRFLTTHDCASLETVISIINIS-SLWFRRDFTNCFKL-DQKPLVAAMH 115

Query: 261 REFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFH 320
            +       P     +V+ GSEIP+WF  +  GSS+T+  PS   N + + G A C VF 
Sbjct: 116 LKIQSGEETPHGTIQMVLLGSEIPEWFGDKGIGSSLTIQLPS---NCHLLKGIAFCLVFL 172

Query: 321 VP 322
           +P
Sbjct: 173 LP 174


>gi|297741891|emb|CBI33326.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 87/200 (43%), Gaps = 51/200 (25%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC NL  LP  I  LK L+TL+  GC K E   E +  +  L  LD+SGTAI   P
Sbjct: 19  LTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLP 78

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSAS--CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKL 147
           SSI  +  L+TL  + C+      S  CY                        L SL KL
Sbjct: 79  SSITHLNGLQTLLLQECSKLHQIPSHICY------------------------LSSLKKL 114

Query: 148 DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           +L      EG                    +F ++P +IN L  L+ L L  C  L+ +P
Sbjct: 115 NL------EGG-------------------HFSSIPPTINQLSRLKALNLSHCNNLEQIP 149

Query: 208 QLPPNVEKVRVNGCASLVTL 227
           +LP  +  + V+ C SL  L
Sbjct: 150 ELPSGLINLDVHHCTSLENL 169



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++PS+I  L SLK LNL G  
Sbjct: 61  MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEG-G 119

Query: 61  KFENLLETVGQVESLEELDIS 81
            F ++  T+ Q+  L+ L++S
Sbjct: 120 HFSSIPPTINQLSRLKALNLS 140


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 34/210 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L EL LD   +  +P  I  L+ L +L L G + L  +P+ I  L SL+ LNL    
Sbjct: 120 LTSLEELCLDDNRLTSVPAEIGQLTSLERLYLGGNQ-LTSVPAEIGRLTSLEELNL-KSN 177

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  ++   +GQ+ SLE+L+++G  +   P+ I  + +LK L   G               
Sbjct: 178 QLTSVPAEIGQLASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGNQ------------- 224

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG---AIPSDIGNLHSLKTLYLSKN 177
             L    +D+G L              DL + GL +    ++P++IG L SL+ LY+  N
Sbjct: 225 --LTSVPADIGQLT-------------DLKELGLRDNQLTSVPAEIGQLASLEKLYVGGN 269

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
              ++PA I  L +LE L+L+D  +L S+P
Sbjct: 270 QLTSVPAEIGQLTSLEGLELDD-NQLTSVP 298



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 32/243 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L  L L    +  +P  I  L+ L +L LK    L  +P+ I  L SL+ LNL G  
Sbjct: 143 LTSLERLYLGGNQLTSVPAEIGRLTSLEELNLK-SNQLTSVPAEIGQLASLEKLNLNGN- 200

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN--------GPPSS 112
           +  ++   +GQ+ SL+ELD++G  +   P+ I  + +LK L  R           G  +S
Sbjct: 201 QLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLAS 260

Query: 113 ASCYLPFPINLMRRSSDLGALMLPSLSGL-----------------GSLTKLDLSDCGLG 155
                     L    +++G L   SL GL                  SL  L L D  L 
Sbjct: 261 LEKLYVGGNQLTSVPAEIGQLT--SLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLT 318

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
             ++P++IG L SL  LYLS N   ++PA I  L  L++L L D  +L S+P+    +  
Sbjct: 319 --SVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRD-NQLTSVPEEIWQLTS 375

Query: 216 VRV 218
           +RV
Sbjct: 376 LRV 378



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 34/244 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  LR L LD   +  +P  I  L+ L +L L G + L  +P+ I  L  LK L L    
Sbjct: 304 LTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQ-LTSVPAEIGRLTELKELGLRDNQ 362

Query: 57  ----------LGCFKF----ENLLET----VGQVESLEELDISGTAIRCPPSSIFLMKNL 98
                     L   +     +NLL+     +GQ+ SLEEL +    +   P+ I+ + +L
Sbjct: 363 LTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSL 422

Query: 99  KTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---GALMLPSLSGLGSLTKLD-LSDCGL 154
             L + GCN   S     +P  I  +   + L   G  +    + +G LT L  L   G 
Sbjct: 423 TEL-YLGCNQLTS-----VPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGN 476

Query: 155 GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
              ++P++IG L SL+ LYL+     ++PA I  L  L++L L D K L S+P+    + 
Sbjct: 477 QLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTELKELDLRDNK-LTSVPEEIWQLT 535

Query: 215 KVRV 218
            +RV
Sbjct: 536 SLRV 539



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 31/221 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  LR L LD   + E+P  I  L+ L +L L+    L  +P+ I  L SL  L  LGC 
Sbjct: 373 LTSLRVLYLDDNLLDELPAEIGQLTSLEELGLE-RNELTSVPAEIWQLTSLTEL-YLGCN 430

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  ++   +GQ+ SL +L +SGT +   P+ I  + +L+ L   G      +    LP  
Sbjct: 431 QLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYG------NQLTSLPAE 484

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L SL +L L+   L   ++P++IG L  LK L L  N   
Sbjct: 485 I-----------------GQLASLRELYLNGKQLT--SVPAEIGQLTELKELDLRDNKLT 525

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
           ++P  I  L +L  L L+D +    L  +P  + +++  GC
Sbjct: 526 SVPEEIWQLTSLRVLYLDDNQ----LTSVPAAIRELKAAGC 562



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 26/139 (18%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           +GQ+ SLE LD+    +   P+ I  + +L  L              YL F   L    +
Sbjct: 25  IGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTEL--------------YL-FGNQLTSVPA 69

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           ++G L         SLT LDLS   L   ++P+++G L SL+ L+L  N   ++PA I  
Sbjct: 70  EIGQLT--------SLTGLDLSGNQLT--SVPAEVGQLTSLRELHLWNNRLTSVPAEIGQ 119

Query: 189 LFNLEKLKLEDCKRLQSLP 207
           L +LE+L L+D  RL S+P
Sbjct: 120 LTSLEELCLDD-NRLTSVP 137


>gi|108738462|gb|ABG00764.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSIXELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 108/209 (51%), Gaps = 27/209 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ELLLD T IK +P SI  L  L  L+L+GCK +  LP  I +LKSL+ L  L   
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKL-YLDDT 204

Query: 61  KFENLLETVGQVESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             +NL  ++G +++L++L  +  T++   P SI  +K+LK L   G      SA   LP 
Sbjct: 205 ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIXELKSLKKLFING------SAVEELP- 257

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
               ++ SS      LPSL    +       DC   +  +PS IG L+SL  L LS    
Sbjct: 258 ----LKPSS------LPSLYDFSA------GDCKFLK-QVPSSIGRLNSLLQLQLSSTPI 300

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             LP  I  L  + +L+L +CK L+ LP+
Sbjct: 301 EALPEEIGALHFIRELELRNCKFLKFLPK 329



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +I  LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIXELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|295083307|gb|ADF78107.1| Rj2 protein [Glycine max]
 gi|295083315|gb|ADF78111.1| Rj2 protein [Glycine max]
 gi|295083317|gb|ADF78112.1| Rj2 protein [Glycine max]
          Length = 1052

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 118/293 (40%), Gaps = 52/293 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ +L 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRQLC 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +S ++I   P S   +  L+ L  R  +     A   +P  I LM   +++  + L    
Sbjct: 734 LSESSITELPFSFQNLAGLQALELRFLS---PHAIFKVPSSIVLMPELTEIFVVGLKGWQ 790

Query: 140 GL--------------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            L                + +L ++ C L +     D      +K L LS+NNF  LP  
Sbjct: 791 WLKQEEGEEKTGSIVSSKVVRLTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPEC 850

Query: 186 IN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
           I  C F L  L + DCK L+ +  +PPN++      C SL +                  
Sbjct: 851 IKECQF-LRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTS------------------ 891

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                        S +R+FL      +      +PG  IP+WF  Q+ G SI+
Sbjct: 892 -------------SSIRKFLNQELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS 931


>gi|168033675|ref|XP_001769340.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679446|gb|EDQ65894.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 524

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 23/239 (9%)

Query: 4   LRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL+L D   +  +P  +  LS L  L L GC +L  LP+ + +L SL  L+L GC   
Sbjct: 20  LEELVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPNELANLSSLTILDLSGCSSL 79

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            +L   +  + SL  LD+SG +++   P+ +  +  L+ L   GC+   S        P 
Sbjct: 80  TSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVLSGCSSLTS-------LPN 132

Query: 122 NLMRRSS----DLGA----LMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            L+  SS    DL      + LP+ L+ L  LT LDLS C     ++P+++ NL SL+ L
Sbjct: 133 ELVNLSSLKMLDLNGCSNLISLPNELANLSFLTILDLSGC-FSLISLPNELANLSSLEVL 191

Query: 173 YLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
            LS  ++  +LP  +  L +L+ L L  C  L SLP    N   +E++ ++GC+SL +L
Sbjct: 192 VLSGCSSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANLSSLEELVLSGCSSLTSL 250



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 30/210 (14%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           LS L  L L GC +L  LP+ + +L SLK L L+GC    +L   +  + SLEEL +SG 
Sbjct: 185 LSSLEVLVLSGCSSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANLSSLEELVLSGC 244

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMRRSSDLGALMLPSLSGL 141
           +++    + +  + +L+ L+  GC            F  I+L    ++L +L    LSG 
Sbjct: 245 SSLTSLSNELANLSSLRRLNLSGC------------FSLISLPNELANLYSLKFLVLSGC 292

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDC 200
            SLT L            P+++ NL SL+ L +S  ++  TLP  +  L +LE+L L  C
Sbjct: 293 SSLTSL------------PNELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVLSGC 340

Query: 201 KRLQSLPQLPPNVEKVR---VNGCASLVTL 227
             L SLP    N+  ++   +NGC+SL++L
Sbjct: 341 SSLISLPNELTNLSSLKMLDLNGCSSLISL 370



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 29/230 (12%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL++   + +  +P  +  LS L +L L GC +L+ LP+ + +L SLK L+L GC   
Sbjct: 308 LEELIMSGFSSLTTLPNELTNLSSLEELVLSGCSSLISLPNELTNLSSLKMLDLNGCSSL 367

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            +L   +  + SL  LD++G ++++  P+ +  +  L  L+  GC       SC    P 
Sbjct: 368 ISLPNELTNLSSLTRLDLNGCSSLKSLPNELANLSYLTRLNLSGC-------SCLTSLP- 419

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
                           L+ L  LT+LDLS C     ++P+++ NL  L TL LS  ++  
Sbjct: 420 --------------NELANLSFLTRLDLSGCS-SLTSLPNELTNLSFLTTLDLSGCSSLT 464

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
           +LP  +  L +L+ L L  C  L  LP    N+    ++ ++GC SL++L
Sbjct: 465 SLPNELANLSSLKMLDLNGCSSLIILPNELANLSFLTRLNLSGCLSLISL 514



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 22/230 (9%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  LS L  L L GC +L  LP+ + +L SL+ L L GC    +L   +  
Sbjct: 197 SSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANLSSLEELVLSGCSSLTSLSNELAN 256

Query: 72  VESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  L++SG  ++   P+ +  + +LK L   GC+   S        P  L+  SS  
Sbjct: 257 LSSLRRLNLSGCFSLISLPNELANLYSLKFLVLSGCSSLTS-------LPNELVNLSSLE 309

Query: 131 GALM--------LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
             +M        LP+ L+ L SL +L LS C     ++P+++ NL SLK L L+  ++ +
Sbjct: 310 ELIMSGFSSLTTLPNELTNLSSLEELVLSGCS-SLISLPNELTNLSSLKMLDLNGCSSLI 368

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
           +LP  +  L +L +L L  C  L+SLP    N+    ++ ++GC+ L +L
Sbjct: 369 SLPNELTNLSSLTRLDLNGCSSLKSLPNELANLSYLTRLNLSGCSCLTSL 418



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 46/254 (18%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVG- 70
           + +  +P  +  LS L +L L GC +L  L + + +L SL+ LNL GCF   +L   +  
Sbjct: 221 SSLTSLPNELANLSSLEELVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPNELAN 280

Query: 71  -----------------------QVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
                                   + SLEEL +SG +++   P+ +  + +L+ L   GC
Sbjct: 281 LYSLKFLVLSGCSSLTSLPNELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVLSGC 340

Query: 107 NGPPSSASCYLPFPINLMRRSS----DLGA----LMLPS-LSGLGSLTKLDLSDCGLGEG 157
                  S  +  P  L   SS    DL      + LP+ L+ L SLT+LDL+ C     
Sbjct: 341 -------SSLISLPNELTNLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCS-SLK 392

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-- 214
           ++P+++ NL  L  L LS  + +T LP  +  L  L +L L  C  L SLP    N+   
Sbjct: 393 SLPNELANLSYLTRLNLSGCSCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNLSFL 452

Query: 215 -KVRVNGCASLVTL 227
             + ++GC+SL +L
Sbjct: 453 TTLDLSGCSSLTSL 466



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 28/201 (13%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPS 90
           + G  +L  LP+ + +L SL+ L L  C    +L   +  + SL  LD+SG +++   P+
Sbjct: 1   MSGFSSLTSLPNELVNLSSLEELVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPN 60

Query: 91  SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLS 150
            +  + +L  L   GC+               L   S++L          L SLT LDLS
Sbjct: 61  ELANLSSLTILDLSGCSS--------------LTSLSNELA--------NLSSLTTLDLS 98

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
            C     ++P+++ NL  L+ L LS  ++  +LP  +  L +L+ L L  C  L SLP  
Sbjct: 99  GCS-SLISLPNELTNLSFLEELVLSGCSSLTSLPNELVNLSSLKMLDLNGCSNLISLPNE 157

Query: 210 PPNVEKVRV---NGCASLVTL 227
             N+  + +   +GC SL++L
Sbjct: 158 LANLSFLTILDLSGCFSLISL 178


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 30/206 (14%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+ L +  T +  +P SI  LS L  L + G  +L  LP +I  L +LK L++       
Sbjct: 176 LQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGT-DLATLPDSIGQLTNLKHLDV-SSTSLN 233

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L +++GQ+ SL+ LD+SGT+++  P SI  + +L+ L   G                  
Sbjct: 234 TLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTR---------------- 277

Query: 124 MRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                     +LP S+  L SL  LD+SD  +    +P  IG L +L+ L +S  +  TL
Sbjct: 278 --------LQILPDSIVQLSSLQHLDVSDTSINN--LPDSIGQLSNLQHLDVSDTSLNTL 327

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ 208
           P SI  L NL+ L++ D   L +LP+
Sbjct: 328 PDSIGQLSNLQHLEVSDAS-LNTLPE 352



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 101/216 (46%), Gaps = 20/216 (9%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+ L +    +  +P +I  LS L  L L G   L  LP  +  L SL+ LNL G     
Sbjct: 337 LQHLEVSDASLNTLPETIWRLSSLQDLNLSGT-GLTTLPEALCQLSSLQDLNLSGT-GLT 394

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L E + Q+ SL++L++SGT +   P +I  + +L+ L+  G      +    LP  I  
Sbjct: 395 TLPEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSG------TGLTTLPEAICQ 448

Query: 124 MRRSSDL-----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           +    DL     G   LP ++  L SL  L+LS  GL    +P  IG L +L  L  S  
Sbjct: 449 LNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLT--TLPETIGQLTNLNNLMASNT 506

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
              TLP ++  L NLE L + +     SL  LP ++
Sbjct: 507 ALTTLPDTLGQLSNLEFLNISNT----SLVTLPDSI 538



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 28/231 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L++L L  T +  +P +I  L+ L  L L G   L  LP  I  L SL+ LNL G  
Sbjct: 380 LSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGT-GLTTLPEAICQLNSLQDLNLSGT- 437

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC-------------- 106
               L E + Q+ SL++L++SGT +   P +I  + +L+ L+  G               
Sbjct: 438 GLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTN 497

Query: 107 -NGPPSSASCYLPFPINLMRRS-------SDLGALMLPSLSGLGS-LTKLDLSDCGLGEG 157
            N   +S +     P  L + S       S+   + LP   GL S L  L +SD  L   
Sbjct: 498 LNNLMASNTALTTLPDTLGQLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDTDLV-- 555

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            +P  IG L SL+ L +S     +LP SI  L NL+ L + +   L SLP+
Sbjct: 556 TLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNTD-LTSLPE 605



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 12/212 (5%)

Query: 1   MECL---RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLL 57
           +ECL     L +  T +K++P  I  L GL  L +     L  LP++I  L +L+ L++ 
Sbjct: 78  LECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTA-LTTLPNSIRQLSNLRRLDI- 135

Query: 58  GCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL--SFRGCNGPPSSASC 115
               F NL +++G++ +L++L++S T +   P+SI  +  L+ L  S  G    P S   
Sbjct: 136 SFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIG- 194

Query: 116 YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            L    +L    +DL  L   S+  L +L  LD+S   L    +P  IG L SL+ L +S
Sbjct: 195 QLSMLKHLDVSGTDLATLP-DSIGQLTNLKHLDVSSTSL--NTLPDSIGQLSSLQHLDVS 251

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
             +  TLP SI  L +L+ L +    RLQ LP
Sbjct: 252 GTSLQTLPDSIGQLSSLQHLDVSGT-RLQILP 282



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 25/151 (16%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L  L+   T +  +P ++  LS L  L +    +LV LP +I  L  L+ L  +      
Sbjct: 498 LNNLMASNTALTTLPDTLGQLSNLEFLNISNT-SLVTLPDSIGLLSHLQIL-FVSDTDLV 555

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L E++GQ+ SLE L++S T +   P SI  + NL+ L+                     
Sbjct: 556 TLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNV-------------------- 595

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGL 154
              ++DL +L   S+  L SL KL++S+ GL
Sbjct: 596 --SNTDLTSLP-ESIGQLKSLIKLNVSNTGL 623


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 103/214 (48%), Gaps = 17/214 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L  L L    +  +P SI  LS L +L L G + L  LP +I  L +L  L  L   
Sbjct: 71  LSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQ-LTSLPESITKLSNLTEL-YLSVN 128

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L E++G++ +L  LD+ G  +   P SI  + NL  L + G N   S     LP  
Sbjct: 129 KLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTEL-YLGHNQLTS-----LPES 182

Query: 121 INLMRRSSDL--GALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  +   ++L  G   L SL    + L +LT LDLS   L   ++P  I  L +L +LYL
Sbjct: 183 ITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLT--SLPESITKLSNLTSLYL 240

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             N   +LP SI  L NL  L L    +L S+P+
Sbjct: 241 GSNQLTSLPESITTLSNLTVLDL-GSNQLTSMPE 273



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 8/194 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L EL L    +  +P SI  LS L  L L   K L  LP +I  L +L +L  LG  
Sbjct: 186 LSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNK-LTSLPESITKLSNLTSL-YLGSN 243

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG--CNGPPSSASCYLP 118
           +  +L E++  + +L  LD+    +   P SI  + NL  L   G      P S +  L 
Sbjct: 244 QLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESITK-LS 302

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
               L  R++ L  L   S++ L +LTKL+LS   L   ++P  IG L +L +LYL  N 
Sbjct: 303 NLTKLDLRNNQLTRLP-ESITKLSNLTKLNLSWNKL--TSLPESIGKLSNLTSLYLRDNQ 359

Query: 179 FVTLPASINCLFNL 192
              LP SI  L NL
Sbjct: 360 LTILPESITTLSNL 373



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 27/160 (16%)

Query: 49  KSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
           + LK L L GC K   +   V ++E LE LD+    +   P SI  + NL +L     N 
Sbjct: 26  QKLKWLYLSGC-KLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYL--VNN 82

Query: 109 PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
             +S    LP                  S++ L +LT+L L    L   ++P  I  L +
Sbjct: 83  KLTS----LP-----------------ESITKLSNLTELYLDGNQLT--SLPESITKLSN 119

Query: 169 LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           L  LYLS N   +LP SI  L NL  L L    +L SLP+
Sbjct: 120 LTELYLSVNKLTSLPESIGKLSNLTSLDL-GGNQLTSLPE 158


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 115/223 (51%), Gaps = 24/223 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LREL L    +K +P  I  L  L +L L   + L  LP +I  L++L+ L L G  
Sbjct: 131 LQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQ-LKTLPKDIGQLQNLRELYLDGN- 188

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L + +G++++L EL+++   +   P  I  +KNL  L         ++    LP  
Sbjct: 189 QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLL------INNELTTLPKE 242

Query: 121 INLMR--RSSDLGALM--LPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
           I  ++  + S LGAL+  LP+  G L SL +L+LS   +    +P DIG L +L+ LYLS
Sbjct: 243 IGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQIT--TLPKDIGQLQNLQVLYLS 300

Query: 176 KNNFVTLPASINCLFNLEKLKL---------EDCKRLQSLPQL 209
           +N   TLP  I  L NL +L L         +D   LQSL +L
Sbjct: 301 ENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLREL 343



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 18/214 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LREL L    +  +P  I  L  L +L L   + L  LP +I  L++L+ L  L   
Sbjct: 108 LKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQ-LKTLPKDIGQLQNLREL-YLDNN 165

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L + +GQ+++L EL + G  ++  P  I  ++NL  L+    N P ++    LP  
Sbjct: 166 QLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNL--TNNPLTT----LPKD 219

Query: 121 INLMRRSSDLGALMLPS--LSGL----GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++   +LG L+L +  L+ L    G L  L +S  G     +P+DIG L SL+ L L
Sbjct: 220 IGNLK---NLGELLLINNELTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNL 276

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           S N   TLP  I  L NL+ L L +  +L +LP+
Sbjct: 277 SGNQITTLPKDIGQLQNLQVLYLSE-NQLATLPK 309



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 103/227 (45%), Gaps = 36/227 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ LREL LD   +K +P  I  L  L +L L     L  LP +I +LK+L  L L+   
Sbjct: 177 LQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNP-LTTLPKDIGNLKNLGELLLINNE 235

Query: 59  -------CFKFENL--------LET----VGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
                    K +NL        L T    +G ++SL EL++SG  I   P  I  ++NL+
Sbjct: 236 LTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQ 295

Query: 100 TLSFRGCNGPPSSASCYLPFPINLMR--RSSDLGALMLPSL----SGLGSLTKLDLSDCG 153
            L          +    LP  I  ++  R  DL    + +L      L SL +L+LS   
Sbjct: 296 VLYLS------ENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNL 349

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           L    +P DIG L SL+ L L  N   T+P  I  L NL+ L L+D 
Sbjct: 350 LT--TLPKDIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDI 394



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 27/181 (14%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L +L L     L  LP  I  L+ ++ L+L    +   L + +G+++ L 
Sbjct: 55  LPKEIGELQNLTELYL-SSNQLKTLPKEIGKLQKIERLSL-SNNQLTTLPKDIGKLKKLR 112

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP 136
           ELD++   +   P  I  ++NL+ L         ++    LP          D+G L   
Sbjct: 113 ELDLTNNLLTTLPKEIGQLQNLRELDL------TNNQLKTLP---------KDIGQLQ-- 155

Query: 137 SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
                 +L +L L +  L    +P DIG L +L+ LYL  N   TLP  I  L NL +L 
Sbjct: 156 ------NLRELYLDNNQL--KTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELN 207

Query: 197 L 197
           L
Sbjct: 208 L 208



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            +P +IG L +L  LYLS N   TLP  I  L  +E+L L +  +L +LP+    ++K+R
Sbjct: 54  TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSN-NQLTTLPKDIGKLKKLR 112


>gi|168041140|ref|XP_001773050.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675597|gb|EDQ62090.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 356

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 12/223 (5%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L  L  L ++ C++L  LP+ + +L SL +LN+ GC    +L   +G + 
Sbjct: 15  LKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGCSSLTSLPNELGNLT 74

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSSD 129
           SL  L+IS   ++   P+ +    +L TL+   C+     P+         I  M   S 
Sbjct: 75  SLTTLNISWCLSLTSLPNELGNHSSLTTLNMEECSRLTSLPNELGHLTSLTILNMMECSS 134

Query: 130 LGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASIN 187
           L +  LP+ L  L SLT L+L  C     ++P+++GNL SL TL + + +   +LP  + 
Sbjct: 135 LTS--LPNELGNLTSLTTLNLERCS-RLTSLPNELGNLTSLTTLNMERCSRLTSLPNELG 191

Query: 188 CLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
            L +L  L +E+C RL SLP       ++  + + GC+SL +L
Sbjct: 192 NLTSLTTLNMEECSRLTSLPNELGHLTSLTTLNMKGCSSLTSL 234



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           ++ L  L L+ C+ L  LP++I SL SLK LN+  C    +L   +G + SL  L++ G 
Sbjct: 1   MTSLKILNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGC 60

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPS-L 138
           +++   P+ +  + +L TL+   C      P+    +       M   S L +  LP+ L
Sbjct: 61  SSLTSLPNELGNLTSLTTLNISWCLSLTSLPNELGNHSSLTTLNMEECSRLTS--LPNEL 118

Query: 139 SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKL 197
             L SLT L++ +C     ++P+++GNL SL TL L + +   +LP  +  L +L  L +
Sbjct: 119 GHLTSLTILNMMECS-SLTSLPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNM 177

Query: 198 EDCKRLQSLPQ 208
           E C RL SLP 
Sbjct: 178 ERCSRLTSLPN 188



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 28/225 (12%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           +++ + +  +P  +  L+ L  L L+ C  L  LP+ + +L SL TLN+  C +  +L  
Sbjct: 129 MMECSSLTSLPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNMERCSRLTSLPN 188

Query: 68  TVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            +G + SL  L++   + +   P+ +  + +L TL+ +GC     S+   LP        
Sbjct: 189 ELGNLTSLTTLNMEECSRLTSLPNELGHLTSLTTLNMKGC-----SSLTSLP-------- 235

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
            ++LG           SLT L++ +C     ++P+++GNL SL TL +   ++  +LP  
Sbjct: 236 -NELGHFT--------SLTTLNMEECS-SLTSLPNELGNLISLTTLNMGGCSSLTSLPKE 285

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
           +  L +L  L +E C  L SLP    N+     + ++ C SL +L
Sbjct: 286 LGNLTSLTTLNMERCSSLSSLPNELGNLTSLTTLNISWCLSLTSL 330



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 12/225 (5%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L+ L  L +  C +L  LP+ + +  SL TLN+  C +  +L   +G 
Sbjct: 61  SSLTSLPNELGNLTSLTTLNISWCLSLTSLPNELGNHSSLTTLNMEECSRLTSLPNELGH 120

Query: 72  VESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRS 127
           + SL  L+ +  +++   P+ +  + +L TL+   C+     P+            M R 
Sbjct: 121 LTSLTILNMMECSSLTSLPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNMERC 180

Query: 128 SDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
           S L +  LP+ L  L SLT L++ +C     ++P+++G+L SL TL +   ++  +LP  
Sbjct: 181 SRLTS--LPNELGNLTSLTTLNMEECS-RLTSLPNELGHLTSLTTLNMKGCSSLTSLPNE 237

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           +    +L  L +E+C  L SLP    N   +  + + GC+SL +L
Sbjct: 238 LGHFTSLTTLNMEECSSLTSLPNELGNLISLTTLNMGGCSSLTSL 282



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 24/152 (15%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           L+ L  L +KGC +L  LP+ +    SL TLN+  C    +L   +G + SL  L++ G 
Sbjct: 217 LTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNMEECSSLTSLPNELGNLISLTTLNMGGC 276

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG 142
           +++   P  +  + +L TL+   C+   S     LP         ++LG         L 
Sbjct: 277 SSLTSLPKELGNLTSLTTLNMERCSSLSS-----LP---------NELG--------NLT 314

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           SLT L++S C L   ++P+++ NL SL TL +
Sbjct: 315 SLTTLNISWC-LSLTSLPNELDNLTSLTTLNM 345


>gi|13517466|gb|AAK28804.1|AF310959_1 resistance-like protein P1-B [Linum usitatissimum]
          Length = 1196

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 148/366 (40%), Gaps = 109/366 (29%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINS--LK--SLKTLNLLGCFKFENLLETVGQ 71
            E+P  ++ L+ LV L +  CKNL RLP  ++S  LK   +K L +  C + ++       
Sbjct: 715  EVPFHVQYLTKLVTLDISHCKNLKRLPPKLDSKLLKHVRMKGLGITRCPEIDS------- 767

Query: 72   VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSS 128
               LEE D+ GT++   PS+I+ +K    L   G N    PP + +      I+   R  
Sbjct: 768  -RELEEFDLRGTSLGELPSAIYNIKQNGVLRLHGKNITKFPPITTTLKHFSLISTSIREI 826

Query: 129  DLG----------ALMLPSLSGL------------------------------------- 141
            DL            L+LP    L                                     
Sbjct: 827  DLADYHQQHQTSDGLLLPRFQNLFLAGNRQLEVLPNGIWNMISEDLLIGRSPLIESLPEI 886

Query: 142  ----GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
                 +LT L++  C     +IP+ I NL SL++L LSK    +LP+SI+ L  L  + L
Sbjct: 887  SEPMNTLTSLEVFYCR-SLTSIPTSISNLRSLRSLRLSKTGIKSLPSSIHELRQLYSIDL 945

Query: 198  EDCKRLQ------------------------SLPQLPPNVEKVRVNGCASLVT------- 226
             +CK L+                        SLP+LPPN++ + V+GC SL         
Sbjct: 946  RNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPPNLKTLNVSGCKSLQALPSNTCK 1005

Query: 227  LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVS-APSHKFSIVVPGSEIPK 285
            LL   ++    C  +D            +    +  FL   S +PS++  +   GSE+PK
Sbjct: 1006 LLYLNRIYFEECPQVD----------QTIPAEFMANFLVHASLSPSYERQVRCSGSELPK 1055

Query: 286  WFMYQN 291
            WF Y++
Sbjct: 1056 WFSYRS 1061



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 11   KTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVG 70
            KT IK +P SI  L  L  + L+ CK+L  +P++I++L SL T ++ GC    +L E   
Sbjct: 924  KTGIKSLPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPEL-- 981

Query: 71   QVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
               +L+ L++SG  +++  PS+   +  L  + F  C
Sbjct: 982  -PPNLKTLNVSGCKSLQALPSNTCKLLYLNRIYFEEC 1017


>gi|295083319|gb|ADF78113.1| Rj2 protein [Glycine max]
          Length = 1052

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 118/293 (40%), Gaps = 52/293 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ +L 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRQLC 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +S ++I   P S   +  L+ L  R  +     A   +P  I LM   +++  + L    
Sbjct: 734 LSESSITELPFSFQNLAGLQALELRFLS---PHAIFKVPSSIVLMPELTEIFVVGLKGWQ 790

Query: 140 GL--------------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            L                + +L ++ C L +     D      +K L LS+NNF  LP  
Sbjct: 791 WLKQEEGEEKTGSIVSSKVVRLTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPEC 850

Query: 186 IN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
           I  C F L  L + DCK L+ +  +PPN++      C SL +                  
Sbjct: 851 IKECQF-LRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTS------------------ 891

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                        S +R+FL      +      +PG  IP+WF  Q+ G SI+
Sbjct: 892 -------------SSIRKFLNQELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS 931


>gi|108738554|gb|ABG00809.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTA++  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-VKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|242047708|ref|XP_002461600.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
 gi|241924977|gb|EER98121.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
          Length = 1100

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           I E+P  I  L  L  L +   K + RLP+ I  LK LKTL++    +   L + +G+++
Sbjct: 627 IIEIPADIGRLKYLDTLEVTATK-ITRLPAEIGDLKQLKTLDVSENREITELPKEIGKLQ 685

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC--NGPPSSASCYLPFPINLMRRSSDLG 131
            L+ LD+S T IR  P  I  +++L+TL   G   +  P      L   + L  + +   
Sbjct: 686 HLKTLDMSCTGIRELPKEIGKLQHLETLDISGTWISELPKEIG-NLQHLVTLDVKGTTGI 744

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
             + P +S L  L  LDLS   + +  +P DIG L  L+TL L+  N   LP  I+ L  
Sbjct: 745 KELPPEISNLQRLAYLDLSYTQITK--MPRDIGKLQHLETLNLTSTNLTELPREISNLKW 802

Query: 192 LEKLKL---------EDCKRLQSLPQLPPNVEKVR 217
           L  L L          D  +LQ L  L     KVR
Sbjct: 803 LVYLNLYGTAITKVPRDIGKLQHLEYLDLGNTKVR 837



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 29/195 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L +  T I E+P  I  L  LV L +KG   +  LP  I++L+ L  L+ L   
Sbjct: 707 LQHLETLDISGTWISELPKEIGNLQHLVTLDVKGTTGIKELPPEISNLQRLAYLD-LSYT 765

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   +   +G+++ LE L+++ T +   P  I    NLK L +    G   +A   +P  
Sbjct: 766 QITKMPRDIGKLQHLETLNLTSTNLTELPREI---SNLKWLVYLNLYG---TAITKVP-- 817

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   D+G L          L  LDL +  + +  IP +IG L +LK L   K++  
Sbjct: 818 -------RDIGKLQ--------HLEYLDLGNTKVRK--IPREIGGLQNLKYL---KDDVG 857

Query: 181 TLPASINCLFNLEKL 195
             P     L  LE L
Sbjct: 858 MQPIEAAQLPKLEGL 872


>gi|108738458|gb|ABG00762.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738512|gb|ABG00789.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738514|gb|ABG00790.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTA++  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-VKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|227438127|gb|ACP30553.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1290

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 183/458 (39%), Gaps = 114/458 (24%)

Query: 4    LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L E+ LD+ T +   P SI+ L  L +L L+GC  L   P+ IN LKSL+ LNL  C + 
Sbjct: 646  LEEVYLDRCTSLVTFPSSIQNLHKLRELDLEGCTELESFPTLIN-LKSLEYLNLRECSRL 704

Query: 63   ENLLETV---GQVESLE-----------ELDISGTAIRCPP------------------- 89
             N  +      Q  SLE            LD  G  +RC P                   
Sbjct: 705  RNFPQIYINSSQGFSLEVEGCFWNNNLCGLDYLGCIMRCIPCKFRPEQLIGLTVKSNMLE 764

Query: 90   ---SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLT 145
                 +  + +L+ +    C          +   +  +R ++    + +PS  G L  L 
Sbjct: 765  RLWEGVQCLGSLEMMDVSSCENLTEIPDLSMAPNLMYLRLNNCKSLVTVPSTIGSLCKLV 824

Query: 146  KLDLSDCGLGEGAIPSDIGNLHSLKTLYLS---------------------KNNFVTLPA 184
             L++ +C + E  +P+D+ NL SL+TLYLS                           +P 
Sbjct: 825  GLEMKECTMLE-VLPTDV-NLSSLRTLYLSGCSRLRSFPQISRSIASLYLNDTAIEEVPC 882

Query: 185  SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR------VNGCASLVTLLGALKLR---- 234
             I   + L +L +  CKRL+++    PN  ++R       + C  ++T+L    ++    
Sbjct: 883  CIENFWRLSELSMSGCKRLKNIS---PNFFRLRSLHLVDFSDCGEVITVLSDASIKAKMS 939

Query: 235  -KSSCTIIDFVDSLKLLGKNGLAIS------------------MLREFLEVVSAPSHKFS 275
             +   ++I   ++ +   K+G  I                   + R+  E++   S+   
Sbjct: 940  IEDHFSLIPLFENTEERYKDGADIDWAGVSRNFEFLNFNNCFKLDRDARELI-IRSYMKP 998

Query: 276  IVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPKHS------TGIR 329
             V+PG E+P +F ++  G+S+ VT P    + +  +G+ AC     P  +       G+R
Sbjct: 999  TVLPGGEVPTYFTHRASGNSLAVTLPQSSLSQD-FLGFKACIAVEPPNKAETPYVQMGLR 1057

Query: 330  RFYRYPHPAH---VLHCS--MDEKFGHRGSDHLWLLYL 362
             ++R     H   V H S  MDE       DHL + + 
Sbjct: 1058 WYFRGRSSVHHFTVYHHSFKMDE-------DHLLMFHF 1088



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 130/299 (43%), Gaps = 31/299 (10%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL +  + ++++      L  L +L +     L  LP ++++ KSL+ + L  C  
Sbjct: 598 EYLVELRMKNSSLEKLWEGTLPLGRLKKLIMSWSTYLKELP-DLSNAKSLEEVYLDRCTS 656

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                 ++  +  L ELD+ G T +   P+ I L K+L+ L+ R C+   +    Y+   
Sbjct: 657 LVTFPSSIQNLHKLRELDLEGCTELESFPTLINL-KSLEYLNLRECSRLRNFPQIYI--- 712

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 SS   +L +       +L  LD   C +    IP        L  L +  N   
Sbjct: 713 -----NSSQGFSLEVEGCFWNNNLCGLDYLGCIM--RCIPCKF-RPEQLIGLTVKSNMLE 764

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQL--PPNVEKVRVNGCASLVTL---LGAL---- 231
            L   + CL +LE + +  C+ L  +P L   PN+  +R+N C SLVT+   +G+L    
Sbjct: 765 RLWEGVQCLGSLEMMDVSSCENLTEIPDLSMAPNLMYLRLNNCKSLVTVPSTIGSLCKLV 824

Query: 232 KLRKSSCTIIDF------VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIP 284
            L    CT+++       + SL+ L  +G   S LR F ++  + +  +       E+P
Sbjct: 825 GLEMKECTMLEVLPTDVNLSSLRTLYLSG--CSRLRSFPQISRSIASLYLNDTAIEEVP 881


>gi|108738498|gb|ABG00782.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSIYELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 107/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL+   L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQDFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 27/209 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ELLLD T IK +P SI  L  L  L+L+GCK +  LP  I +LKSL+ L  L   
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKL-YLDDT 204

Query: 61  KFENLLETVGQVESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             +NL  ++G +++L++L  +  T++   P SI+ +K+LK L   G      SA   LP 
Sbjct: 205 ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFING------SAVEELP- 257

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
               ++ SS      LPSL    +       DC   +  +PS IG L+SL  L LS    
Sbjct: 258 ----LKPSS------LPSLYDFSA------GDCKFLK-QVPSSIGRLNSLLQLQLSSTPI 300

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             LP  I  L  + +L+L +CK L+ LP+
Sbjct: 301 EALPEEIGALHFIRELELRNCKFLKFLPK 329



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +I  LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|404363532|gb|AFR66730.1| AT5G17680-like protein, partial [Capsella rubella]
          Length = 181

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 81/163 (49%), Gaps = 20/163 (12%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +G + +LE L  S T IR  P SI  +  L+ L+           S Y P         
Sbjct: 1   NIGNLVALEVLQASKTVIRRAPWSIAKLSRLQLLAI--------GNSSYTP--------- 43

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L     P LS    L  L  S+  + E  IP+ IGNL +L  L LS NNF  +PASI 
Sbjct: 44  EGLLHSACPPLSRFDDLRALSPSNMNIIE--IPNSIGNLWNLLELDLSGNNFKFVPASIK 101

Query: 188 CLFNLEKLKLEDCKRLQSLP-QLPPNVEKVRVNGCASLVTLLG 229
            L  L +L L +C+RLQ+LP +LP  +  + ++GC SLV++ G
Sbjct: 102 RLTKLNRLNLNNCQRLQALPDELPRGLLYIYIHGCTSLVSISG 144


>gi|108738456|gb|ABG00761.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738547|gb|ABG00806.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSIYELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 27/209 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ELLLD T IK +P SI  L  L  L+L+GCK +  LP  I +LKSL+ L  L   
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKL-YLDDT 204

Query: 61  KFENLLETVGQVESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             +NL  ++G +++L++L  +  T++   P SI+ +K+LK L   G      SA   LP 
Sbjct: 205 ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFING------SAVEELP- 257

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
               ++ SS      LPSL    +       DC   +  +PS IG L+SL  L LS    
Sbjct: 258 ----LKPSS------LPSLYDFSA------GDCKFLK-QVPSSIGRLNSLLQLQLSSTPI 300

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             LP  I  L  + +L+L +CK L+ LP+
Sbjct: 301 EALPEEIGALHFIRELELRNCKFLKFLPK 329



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +I  LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 30/222 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L+EL L  T+++ +P  I  L+ L  L L+   +L  +P+ I  L SL+ L+L G +
Sbjct: 154 LTSLKELSLAGTELRSLPAEIWQLTSLEVLELQN-NHLTSVPAEIGQLTSLRELHLGGNW 212

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  ++   +GQ+ SL+ LD+S   +   P+ I  + +L  L            + +   P
Sbjct: 213 RLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHD--------NQFTSVP 264

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                  +++G L         SL +L L    L   ++PS+IG L SLK L+L  N   
Sbjct: 265 -------AEIGQLT--------SLRELRLGGNQLT--SVPSEIGQLTSLKELWLFDNRLT 307

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           ++PA +  L +L+KL L D      L  +P  V ++R  GC 
Sbjct: 308 SVPAEMGQLTSLKKLYLRD----NLLTSVPTVVRELRAAGCT 345



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 28/182 (15%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIR 86
           +V+L L+G   +  LP+ I  L +L TLNL    K  +L   +GQ+ SL  L++S   + 
Sbjct: 64  VVELELEGFGLIGALPAEIGRLNALSTLNLT-SNKLRSLPAEIGQLTSLRRLELSSNQLT 122

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             P+ I L+ +L+ L    CN   S     +P  I                    G LT 
Sbjct: 123 SVPAEIGLLTSLRQLHLI-CNQLTS-----VPAEI--------------------GQLTS 156

Query: 147 L-DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
           L +LS  G    ++P++I  L SL+ L L  N+  ++PA I  L +L +L L    RL S
Sbjct: 157 LKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGNWRLTS 216

Query: 206 LP 207
           +P
Sbjct: 217 VP 218



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           G + +L+L   GL  GA+P++IG L++L TL L+ N   +LPA I  L +L +L+L    
Sbjct: 62  GRVVELELEGFGL-IGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLEL-SSN 119

Query: 202 RLQSLP 207
           +L S+P
Sbjct: 120 QLTSVP 125


>gi|222631001|gb|EEE63133.1| hypothetical protein OsJ_17941 [Oryza sativa Japonica Group]
          Length = 1393

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 27/225 (12%)

Query: 8    LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
            L +   I ++P SI  L  L  L L GC +LV  P +   L++L+ L+L GC +   L E
Sbjct: 906  LRESPKISKLPESIGKLEALTYLNLSGCSHLVEFPESFGELRNLEHLDLSGCSRLVELPE 965

Query: 68   TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN----------------GPPS 111
            TVG++++L  L++SG+ I   P S   +KNL  L    C                  P  
Sbjct: 966  TVGKLDALMYLNLSGSRIVELPESFRELKNLVHLDLSNCTHLTDVSEHLGSLNRLYRPRL 1025

Query: 112  SASCYLPFPINLMRRSSDLGALMLPSLSG-------LGSLTKLDLSDCGL-GEGAIPSDI 163
             + C + +P    R+  +L ++   + +        + ++++L  SD G    G +   +
Sbjct: 1026 YSRCLVAYPRR--RKIQELSSVQKENEASHIHMQNVMDAISRLVYSDSGYSARGILSEAL 1083

Query: 164  GNLHSLKTLYLSKNNF-VTLPASINCLFNLEKLKLEDCKRLQSLP 207
            G+L  LK L LS     V LP S   L NL  L L  C  L+  P
Sbjct: 1084 GSLTELKYLNLSGCLLMVVLPGSFGNLENLVHLDLSGCSCLEWTP 1128



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 9/99 (9%)

Query: 13   DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            D+ E+P S+     L +L L  C  L  LP +   L SLK+L ++GC    +L E +G +
Sbjct: 1268 DMVELPASLCQFKSLPKLILWKCLKLKSLPESTKHLTSLKSLWMVGCSSMTSLPEGLGHL 1327

Query: 73   ESLEELDISGTAIRCP-----PSSIFLMKNLKTLSFRGC 106
             SL EL+I+     CP     P SI L+  L+ +    C
Sbjct: 1328 ASLMELNIND----CPHLKSLPESIQLLPMLEVVKVSYC 1362



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 25/159 (15%)

Query: 51  LKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
           ++ L+L+GC K +         + L  LD++  +I+  P SI+ +K L+ L        P
Sbjct: 831 IRALHLVGCSKTKLNDGAFSSAKCLRVLDLNHCSIQKLPDSIYQLKQLQYLHA------P 884

Query: 111 SSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                 +P  I+++ + + L     P +S L                  P  IG L +L 
Sbjct: 885 QVRDGVIPESISMLSKLNYLNLRESPKISKL------------------PESIGKLEALT 926

Query: 171 TLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            L LS  ++ V  P S   L NLE L L  C RL  LP+
Sbjct: 927 YLNLSGCSHLVEFPESFGELRNLEHLDLSGCSRLVELPE 965



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 137  SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKL 195
            SL    SL KL L  C L   ++P    +L SLK+L++   ++  +LP  +  L +L +L
Sbjct: 1275 SLCQFKSLPKLILWKC-LKLKSLPESTKHLTSLKSLWMVGCSSMTSLPEGLGHLASLMEL 1333

Query: 196  KLEDCKRLQSLP---QLPPNVEKVRVNGCASL 224
             + DC  L+SLP   QL P +E V+V+ C  L
Sbjct: 1334 NINDCPHLKSLPESIQLLPMLEVVKVSYCPEL 1365


>gi|15239700|ref|NP_199688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758876|dbj|BAB09430.1| disease resistance protein [Arabidopsis thaliana]
 gi|332008339|gb|AED95722.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1190

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 39/247 (15%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD--ISG 82
           + L +L  KGC  L ++P  I SL SLK L++  C +  NL   +G++ +L++    +  
Sbjct: 650 TKLEELIAKGCTRLEQIPETIGSLPSLKKLDVSHCDRLINLQMIIGELPALQKRSPGLFR 709

Query: 83  TAIRCPPSSIFLMKNLKTLSFRG-------------------------------CNGPPS 111
            A    P ++  + +L +L+  G                                   P 
Sbjct: 710 QASLSFPDAVVTLNSLTSLAIHGKLNFWLSHLRGKADHLCFSSEQWTPNKFLKQVQKTPK 769

Query: 112 SASCYLPF-PINLMR--RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHS 168
             S +  F  +++M+     D  +    S S    LT+L+L    L   +IP DIG L  
Sbjct: 770 LMSEFYGFKSLDIMQFIYRKDSASFQCYSFSDFLWLTELNL--INLNIESIPDDIGLLQV 827

Query: 169 LKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
           L+ L LS N+F  LP  +  L +++ L+L +C +LQ+LP+L P +E ++++ C  L + L
Sbjct: 828 LQKLDLSGNDFTCLPTDMENLSSMKSLRLCNCLKLQTLPKL-PQLETLKLSNCILLQSPL 886

Query: 229 GALKLRK 235
           G    RK
Sbjct: 887 GHSAARK 893



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 126/300 (42%), Gaps = 68/300 (22%)

Query: 51   LKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL-SFRGCNGP 109
            L  LNL+     E++ + +G ++ L++LD+SG    C P+    M+NL ++ S R CN  
Sbjct: 805  LTELNLIN-LNIESIPDDIGLLQVLQKLDLSGNDFTCLPTD---MENLSSMKSLRLCN-- 858

Query: 110  PSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC-----GLGEGAIPSD-- 162
                                   L L +L  L  L  L LS+C      LG  A   D  
Sbjct: 859  ----------------------CLKLQTLPKLPQLETLKLSNCILLQSPLGHSAARKDER 896

Query: 163  ---------------------IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
                                   +  +L  L LS N+ VT+P +I  L  L  L L DCK
Sbjct: 897  GYRLAELWLDNCNDVFELSYTFSHCTNLTYLDLSGNDMVTMPVTIRFLRLLNTLCLNDCK 956

Query: 202  RLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLR 261
            +L+S+ QLPPN+  +   GC SL  +   L L  S    I  VD L    K     +++ 
Sbjct: 957  KLKSMVQLPPNLTSLYARGCTSLEII--HLPLDHS----IKHVD-LSYCPKLNEVANLMD 1009

Query: 262  EFLEVVSAPS--HKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVF 319
             FL          +F+  + GS +P +F YQ    S  ++ P  + + ++ VG+ AC + 
Sbjct: 1010 RFLRCGRKEEVPQRFA-CLSGSRVPIYFDYQAREYSREISIPP-IWHASEFVGFDACIII 1067


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 34/241 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    ++ +P  I  L  L  L L    +L  LP+ I  LKSL+ LNL    
Sbjct: 160 LKSLQELDLSGNKLESLPAVIGNLINLQDLDLHE-NSLKTLPTEIEKLKSLQKLNLQNN- 217

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +FE+L   +G + +L+ELD+    ++  P +I  +K+L+ LSF          + +   P
Sbjct: 218 RFESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSF--------IHNEFESLP 269

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             ++                L +L +L+  D  L    +P +IG L +L+ LYLS NN  
Sbjct: 270 TKVIE---------------LRNLRELNFDDNKLK--LLPVEIGELKNLQKLYLSGNNLK 312

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK-LR 234
           TLP +I  L +L +L L     L+SLP +  N+  ++      N   +L   +G LK LR
Sbjct: 313 TLPDTIGGLKDLRELSL-SGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTIGELKNLR 371

Query: 235 K 235
           K
Sbjct: 372 K 372



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 125/252 (49%), Gaps = 25/252 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L+ L L+   +K +P  I  L  L +L L  C  L  LP+ +  LKSL+ L+L    
Sbjct: 91  LENLKVLFLNVNRLKLLPDEIGKLVSLQELCL-SCNELKLLPAKMVELKSLQKLDLWKN- 148

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +FE     VG+++SL+ELD+SG  +   P+ I  + NL+ L          ++   LP  
Sbjct: 149 RFEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQDLDLH------ENSLKTLPTE 202

Query: 121 INLMRRSSDLGAL-----MLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++    L         LP++ G L +L +LDL    L    +P  IG L  L+ L  
Sbjct: 203 IEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKL--KTLPDTIGELKDLRILSF 260

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP----QLPPNVEKVRVNG--CASLVTLL 228
             N F +LP  +  L NL +L  +D K L+ LP    +L  N++K+ ++G    +L   +
Sbjct: 261 IHNEFESLPTKVIELRNLRELNFDDNK-LKLLPVEIGEL-KNLQKLYLSGNNLKTLPDTI 318

Query: 229 GALK-LRKSSCT 239
           G LK LR+ S +
Sbjct: 319 GGLKDLRELSLS 330


>gi|108738476|gb|ABG00771.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 101/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ +  T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEHCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +D+  +P +I  ++ L +L L G   +  LP +IN L++L+ L+L GC K + L   +G 
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRGC-KIQELPLCIGT 192

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL- 130
           ++SLE+L +  TA++  PSSI  +KNL+ L    C     ++   +P  IN ++    L 
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRC-----TSLSKIPDSINELKSLKKLF 247

Query: 131 ----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP   S L SL      DC   +  +PS IG L+SL  L LS      LP  
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLK-QVPSSIGRLNSLLQLQLSSTPIEALPEE 306

Query: 186 INCLFNLEKLKLEDCKRLQSLPQ 208
           I  L  + +L+L +CK L+ LP+
Sbjct: 307 IGALHFIRELELRNCKFLKFLPK 329



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|115442109|ref|NP_001045334.1| Os01g0937300 [Oryza sativa Japonica Group]
 gi|113534865|dbj|BAF07248.1| Os01g0937300, partial [Oryza sativa Japonica Group]
          Length = 854

 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 101/215 (46%), Gaps = 14/215 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L+L    ++ +P +I  L  L  L L    NL +LPS++  L  L  LNL GC 
Sbjct: 636 LQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCA 695

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
           K E L E++  ++ L+ LDISG  A++  P     +  L  ++   C     S    LP 
Sbjct: 696 KLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSC-----SKLTKLPD 750

Query: 120 PINLMRRS----SDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
            +NL        SD   L  LP  L  L  L  LD+SDC   +  +P     L  LK L 
Sbjct: 751 SLNLESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQ-VLPKTFCQLKHLKYLN 809

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           LS  +  + LP     L  L+ L L  C +LQSLP
Sbjct: 810 LSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLP 844



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 28/204 (13%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P SI  L  L  L + G   ++ LP + ++L+++++L L  C   E L   +G ++ L 
Sbjct: 606 LPSSIRRLMLLGYLDVSGFP-IISLPKSFHTLQNMQSLILSNC-SLEILPANIGSLQKLC 663

Query: 77  ELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
            LD+S  + +   PSS+  +  L  L+  GC          LP  IN             
Sbjct: 664 YLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEE-----LPESIN------------- 705

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEK 194
                L  L  LD+S C      +P   G+L  L  + LS  +    LP S+N L +LE 
Sbjct: 706 ----NLKCLQHLDISGC-CALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEH 759

Query: 195 LKLEDCKRLQSLPQLPPNVEKVRV 218
           L L DC  L+ LP+   N+ ++ V
Sbjct: 760 LILSDCHELEQLPEDLGNLYRLEV 783


>gi|297791225|ref|XP_002863497.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309332|gb|EFH39756.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 846

 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 16/219 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +K +P  ++ +  L  L LKGC +L  LP    +L SLKTL L GC  F+        
Sbjct: 619 TTLKALPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLISDN 676

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +E+L    + GTAI   P+++  ++ L  L+ + C          +P  +  ++    L 
Sbjct: 677 IETLY---LDGTAISQLPTNMEKLQRLVVLNMKDCKMLEE-----IPGRVGELKA---LQ 725

Query: 132 ALMLPSLSGLGSLTKLDLSDCG--LGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINC 188
            L+L     L    ++++S     L +G     +  L SL+ L LS+N  ++ LP  I+ 
Sbjct: 726 ELILSDCLNLKIFPEINMSSLNILLLDGTAIEVMPQLPSLQYLCLSRNAKISYLPDGISQ 785

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           L  L+ L L+ C  L S+P+ PPN++ +  +GC+SL T+
Sbjct: 786 LSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTV 824



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +  L LD T I ++P ++E L  LV L +K CK L  +P  +  LK+L+ L L  C   +
Sbjct: 677 IETLYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 736

Query: 64  NLLETVGQVESLEELDISGTAIRCPP 89
              E    + SL  L + GTAI   P
Sbjct: 737 IFPEI--NMSSLNILLLDGTAIEVMP 760


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP +I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKDIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQDNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
            TLP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TTLPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 28/195 (14%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L  L L G   L  +PS I  LK+L+ LNL    + E L + +GQ+ +L+
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNL-EANELERLPKEIGQLRNLQ 448

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-----------INLMR 125
           +L +    ++  P+ I  +K L+ L          S + +  FP           +NL R
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEIGKLENLQTLNLQR 500

Query: 126 RS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              ++L A     +  L +L +LDL+D       +P +IG L  L+TL L  N   TLP 
Sbjct: 501 NQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQTLDLRNNQLTTLPT 554

Query: 185 SINCLFNLEKLKLED 199
            I  L NL+ L L++
Sbjct: 555 EIGQLQNLQWLYLQN 569



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    +N+   +GQ+++LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K +P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE-LERLPKEIGQLRNLQKLSLHQNT 456

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 457 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 505

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 563

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 564 WLYLQNNQF 572



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 39/231 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQDN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R         +  + FP
Sbjct: 197 QFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--------NRLIVFP 248

Query: 121 INLMRRSSDLGALMLPSL--SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
                   ++G L    +  S    LT            A+P ++G L +L+TL L  N 
Sbjct: 249 -------KEIGQLQNLQMLCSPENRLT------------ALPKEMGQLQNLQTLNLVNNR 289

Query: 179 FVTLPASINCLFNLEKLK-------LEDCKRLQSL-PQLPPNVEKVRVNGC 221
               P  I  L NL+ L+       L++ KR+Q L P    ++ +V  NG 
Sbjct: 290 LTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGV 340



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKDIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|108738502|gb|ABG00784.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 27/196 (13%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
           I  ++                 SL KL L D  L    +PS IG+L +L+ L+L +  + 
Sbjct: 190 IGTLK-----------------SLEKLYLDDTALKN--LPSXIGDLKNLQDLHLVRCTSL 230

Query: 180 VTLPASINCLFNLEKL 195
             +P SIN L +L+KL
Sbjct: 231 SKIPDSINELKSLKKL 246



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 44/241 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK----------------------NL 38
           M  L+ELLLD T IK +P SI  L  L  L+L+GCK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 39  VRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP--------- 89
             LPS I  LK+L+ L+L+ C     + +++ +++SL++L I+G+A+   P         
Sbjct: 207 KNLPSXIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEXPLKPXSLPSL 266

Query: 90  --SSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKL 147
              S    K LK                    PI  +    ++GAL          + +L
Sbjct: 267 YDXSAXDXKXLKQXXXSXXRLNSLLQLQLSSTPIEAL--PEEIGALHF--------IREL 316

Query: 148 DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           +L +C   +  +P  IG++ +L +L L  +N   LP     L  L +L++ +CK L+ LP
Sbjct: 317 ELRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLP 375

Query: 208 Q 208
           +
Sbjct: 376 E 376



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 19/149 (12%)

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
           RR S L   ++  +SGL  L KL LS C      +P +IG + SLK L L       LP 
Sbjct: 108 RRCSKLSEFLV-DVSGLKLLEKLFLSGCS-DLSVLPENIGAMTSLKELLLDGTAIKNLPE 165

Query: 185 SINCLFNLEKLKLEDCKRLQSLP---QLPPNVEKVRVNGCA--SLVTLLGALK----LRK 235
           SIN L NLE L L  CK +Q LP       ++EK+ ++  A  +L + +G LK    L  
Sbjct: 166 SINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDDTALKNLPSXIGDLKNLQDLHL 224

Query: 236 SSCT----IIDFVDSLKLLGK---NGLAI 257
             CT    I D ++ LK L K   NG A+
Sbjct: 225 VRCTSLSKIPDSINELKSLKKLFINGSAV 253


>gi|297805922|ref|XP_002870845.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316681|gb|EFH47104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 836

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 54/303 (17%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L +   +KE+P  +   + L +LTL GC +L  LPS++ +L+ L+ LNL GC K E L  
Sbjct: 485 LWESKHLKELP-DLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPT 543

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +      +        I+  P     +K+L  L++      PS+   +           
Sbjct: 544 NINLESLDDLDLADCLLIKSFPEISTNIKDL-MLTYTAIKEVPSTIKSW----------- 591

Query: 128 SDLGALMLPSLSGLGSLTKLDLS-DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                           L  L++S +  L E     DI     +  LY +      +P  +
Sbjct: 592 --------------SHLRNLEMSYNDNLKEFPHALDI-----ITKLYFNDTEIQEIPLWV 632

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
             +  L+ L LE CKRL ++PQL  ++  V    C SL  L            ++ F++ 
Sbjct: 633 KKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAINCQSLERL--DFSFHNHPKILLWFINC 690

Query: 247 LKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCN 306
            KL   N  A    REF++     S  F+  +PG E+P  F Y+  GSSI V       N
Sbjct: 691 FKL---NNEA----REFIQT----SCTFAF-LPGREVPANFTYRANGSSIMV-------N 731

Query: 307 MNQ 309
           +NQ
Sbjct: 732 LNQ 734



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 36/55 (65%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLN 55
           ++ + +L  + T+I+E+PL ++ +S L  L L+GCK LV +P   +SL ++  +N
Sbjct: 612 LDIITKLYFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAIN 666


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 20/227 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L EL L+   +  +P  I  L+ L +L     + L  +P+ I  L SL+  +L G  
Sbjct: 459 LTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQ-LTSVPAEIGQLTSLEKWDL-GKN 516

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  ++   +GQ+ +L EL + G  +   P+ I  + +LK L   GCN   S     LP  
Sbjct: 517 ELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKL-LLGCNQLTS-----LPAD 570

Query: 121 INLM------RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  +      R   +    +   +  L SL KLDLSD  L   ++P++IG L SL  LYL
Sbjct: 571 IGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLT--SVPTEIGQLTSLTELYL 628

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
           + N   ++P  I  L  LE+L L    RL+S   +P  + ++R  GC
Sbjct: 629 NGNQLTSVPTEIAQLSLLEQLWL-SGNRLKS---VPAAIRELRAAGC 671



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 113/251 (45%), Gaps = 47/251 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  LREL LD   +  +P  I  L+ L +L L GC  L  LP++I  L SL  L L G  
Sbjct: 367 LTALRELRLDGNRLTSLPAEIGQLASLKKLLL-GCNQLTSLPADIGQLTSLWELRLDGN- 424

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG---CNGPPSSA---- 113
           +  ++   +GQ+ SLE+LD+S   +   P+ I  + +L  L   G    + P   A    
Sbjct: 425 RLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTS 484

Query: 114 --------SCYLPFPINLMRRSS----DLGALMLPSL-SGLGSLTKL-DLSDCG------ 153
                   S     P  + + +S    DLG   L S+ + +G LT L +L   G      
Sbjct: 485 LRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSL 544

Query: 154 ---LGEGA--------------IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
              +G+ A              +P+DIG L SL  L L  N   ++PA I  L +LEKL 
Sbjct: 545 PAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLD 604

Query: 197 LEDCKRLQSLP 207
           L D  +L S+P
Sbjct: 605 LSD-NQLTSVP 614



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  LREL LD   +  +P  I  L+ L +L L G + L  +P+ +  L SL TL L G  
Sbjct: 229 LTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQ-LTSVPAEVVQLTSLDTLRL-GGN 286

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN--------GPPSS 112
           +  ++   +GQ+ SL  L + G  +   P+ I  + +L+ L F            G  +S
Sbjct: 287 QLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTS 346

Query: 113 ASCYLPFPINLMRRSSDLGALM--------------LPSLSG-LGSLTKLDLSDCGLGEG 157
              +      L    +++G L               LP+  G L SL KL L    L   
Sbjct: 347 LEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLT-- 404

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           ++P+DIG L SL  L L  N   ++PA I  L +LEKL L D  +L S+P
Sbjct: 405 SLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSD-NQLTSVP 453



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 28/207 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  LR L L    +  +P  I  L+ L +L     + L  +P+ I  L SL+  +L G  
Sbjct: 298 LTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQ-LTSVPAEIGQLTSLEKWDL-GKN 355

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  ++   +GQ+ +L EL + G  +   P+ I  + +LK L   GCN             
Sbjct: 356 ELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKL-LLGCN------------- 401

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             L    +D+G L         SL +L L    L   ++P++IG L SL+ L LS N   
Sbjct: 402 -QLTSLPADIGQLT--------SLWELRLDGNRLT--SVPAEIGQLTSLEKLDLSDNQLT 450

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLP 207
           ++P  I  L +L +L L +  +L S+P
Sbjct: 451 SVPTEIGQLTSLTELYL-NGNQLTSVP 476



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
           + KL+L D  L  GA+P++IG L S+  L L+KN   +LPA I  L +L +L L D  RL
Sbjct: 185 VVKLELEDFDL-TGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELAL-DNNRL 242

Query: 204 QSLP 207
            S+P
Sbjct: 243 TSVP 246



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
           DL   +   +  L S+ KL L+   L   ++P++IG L SL+ L L  N   ++PA I  
Sbjct: 194 DLTGAVPAEIGQLTSMVKLSLTKNQLT--SLPAEIGQLTSLRELALDNNRLTSVPAEIGQ 251

Query: 189 LFNLEKLKLEDCKRLQSLP 207
           L +L +L L +  +L S+P
Sbjct: 252 LTSLTELNL-NGNQLTSVP 269


>gi|297805932|ref|XP_002870850.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316686|gb|EFH47109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 54/303 (17%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L +   +KE+P  +   + L +LTL GC +L  LPS++ +L+ L+ LNL GC K E L  
Sbjct: 702 LWESKHLKELP-DLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPT 760

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +      +        I+  P     +K+L  L++      PS+   +           
Sbjct: 761 NINLESLDDLDLADCLLIKSFPEISTNIKDL-MLTYTAIKEVPSTIKSW----------- 808

Query: 128 SDLGALMLPSLSGLGSLTKLDLS-DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                           L  L++S +  L E     DI     +  LY +      +P  +
Sbjct: 809 --------------SHLRNLEMSYNDNLKEFPHALDI-----ITKLYFNDTEIQEIPLWV 849

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDS 246
             +  L+ L LE CKRL ++PQL  ++  V    C SL  L            ++ F++ 
Sbjct: 850 KKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAINCQSLERL--DFSFHNHPKILLWFINC 907

Query: 247 LKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCN 306
            KL   N  A    REF++     S  F+  +PG E+P  F Y+  GSSI V       N
Sbjct: 908 FKL---NNEA----REFIQT----SCTFAF-LPGREVPANFTYRANGSSIMV-------N 948

Query: 307 MNQ 309
           +NQ
Sbjct: 949 LNQ 951



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 36/55 (65%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLN 55
           ++ + +L  + T+I+E+PL ++ +S L  L L+GCK LV +P   +SL ++  +N
Sbjct: 829 LDIITKLYFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAIN 883


>gi|455790671|gb|EMF42524.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 267

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 13/200 (6%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L++L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQNLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD++G  +   P  I  ++NL+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLAGNQLASLPKEIGQLQNLRVLNLAG------NQFTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 SL   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L NL+ L L D  +L SLP+
Sbjct: 177 LQNLQSLHL-DGNQLTSLPK 195



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 99/218 (45%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G + L  LP  I  L++L+ LNL G  
Sbjct: 39  LQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ-LASLPKEIGQLQNLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 97  QFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L NL+ L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 25/141 (17%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           +G  + E+L   +G  ++LE+L++ G  +   P  I  ++NL+ L+  G        + +
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--------NQF 52

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              P        ++G L         +L +LDL+   L   ++P +IG L +L+ L L+ 
Sbjct: 53  TSLP-------KEIGQLQ--------NLERLDLAGNQLA--SLPKEIGQLQNLRVLNLAG 95

Query: 177 NNFVTLPASINCLFNLEKLKL 197
           N F +LP  I  L NLE+L L
Sbjct: 96  NQFTSLPKEIGQLQNLERLDL 116



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L +L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           +L L    +L SLP+    ++ +RV   A
Sbjct: 67  RLDLA-GNQLASLPKEIGQLQNLRVLNLA 94


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L++L LD   +K +P  I  L  L +L L   + L  LP  I  LK L+ L+L    +  
Sbjct: 107 LQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQ-LKTLPKEIGYLKELQDLDLRDN-QLT 164

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L   +G++++L++LD+SG  ++  P  I  ++NL+ L          +    LP  I  
Sbjct: 165 TLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLN------DNQLKTLPKEIGY 218

Query: 124 MRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           ++   DL         LP+  G L +L KLDLS   L    +P +IG L +L+ LYL  N
Sbjct: 219 LKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLK--TLPKEIGKLQNLQELYLYGN 276

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
              TLP  I  L  L+ L L D K L +LP+
Sbjct: 277 QLKTLPKEIGYLKELQVLHLSDNK-LTTLPK 306



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 4/205 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L LD   +K +P  I  L  L  L L   + L  LP +I  L+ L+ L L    
Sbjct: 358 LQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQ-LKTLPKDIGQLQKLRVLELYNN- 415

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L + +GQ++ L+EL++S   +   P  I  ++NL+ L+                  
Sbjct: 416 QLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQN 475

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           + ++  S +    +   +  L +L +L L++  L    +P DI  L +L+ LYL+ N   
Sbjct: 476 LQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLT--TLPKDIEKLQNLQELYLTNNQLT 533

Query: 181 TLPASINCLFNLEKLKLEDCKRLQS 205
           TLP  I  L  LE L L+D   L+S
Sbjct: 534 TLPKEIRYLKGLEVLHLDDIPALRS 558



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 30/217 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +K +P  I  L  L  L L   K L  LP  I  L+ L+ L  LG  
Sbjct: 265 LQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNK-LTTLPKEIGQLQKLQALLHLGDN 323

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L + +G ++ L+ LD+SG  ++  P  I  ++ L+ L         S+    LP  
Sbjct: 324 QLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLEL------DSNQLKTLP-- 375

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   D+G L         +L  L+LS+  L    +P DIG L  L+ L L  N   
Sbjct: 376 -------KDIGKLQ--------NLQVLNLSNNQL--KTLPKDIGQLQKLRVLELYNNQLK 418

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           TLP  I  L  L++L L   K    L  LP ++EK++
Sbjct: 419 TLPKEIGQLQKLQELNLSHNK----LTTLPKDIEKLQ 451



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF---RGCNGPPSSASCYLPFP 120
           NL E +     +  LD++   +   P  I  ++NL+ L+    +    P           
Sbjct: 28  NLTEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQE 87

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +NL R  + L  L LP+   +G L KL L +  L    +P +IG L +L+ LYL+ N   
Sbjct: 88  LNLSR--NQLTTLTLPN--KIGQLQKLYLDNNQLK--TLPKEIGKLQNLQELYLTNNQLK 141

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLP 207
           TLP  I  L  L+ L L D  +L +LP
Sbjct: 142 TLPKEIGYLKELQDLDLRDN-QLTTLP 167



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 46/202 (22%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLET----VGQVESLEELDIS------------ 81
           L  LP +I  L++L+ LNL     + N L T    +G ++ L+EL++S            
Sbjct: 49  LTTLPKDIGKLQNLQKLNL-----YNNQLTTIPKEIGYLKELQELNLSRNQLTTLTLPNK 103

Query: 82  ----------GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
                        ++  P  I  ++NL+ L         ++    LP  I  ++   DL 
Sbjct: 104 IGQLQKLYLDNNQLKTLPKEIGKLQNLQELYL------TNNQLKTLPKEIGYLKELQDLD 157

Query: 132 -----ALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                   LP+  G L +L KLDLS   L    +P +IG L +L+ L L+ N   TLP  
Sbjct: 158 LRDNQLTTLPNEIGKLQNLQKLDLSGNQL--KTLPKEIGKLQNLRELDLNDNQLKTLPKE 215

Query: 186 INCLFNLEKLKLEDCKRLQSLP 207
           I  L  L+ L L D  +L +LP
Sbjct: 216 IGYLKELQDLDLRDN-QLTTLP 236


>gi|357499585|ref|XP_003620081.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
 gi|355495096|gb|AES76299.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
          Length = 1076

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 132/325 (40%), Gaps = 68/325 (20%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF- 62
           +REL LDK         +  L  L   + +GCKNL+ +  +   L  L+ LN  GC K  
Sbjct: 636 MRELNLDKCQFLTRIHDVSNLPNLEIFSFQGCKNLIEIHRSFGFLNKLEILNATGCSKLM 695

Query: 63  ---------------------ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
                                +   E +G+V+++  + ++ T+I   P S   +  L  L
Sbjct: 696 RFPPMKSMSLRELMLSYCESLKTFPEILGEVKNITYITLTDTSIEKLPVSFQNLTGLSNL 755

Query: 102 SFRGCNGPPSSASCYLPFPINLMRRSSDL---GALMLPSLSGLGSLT-----KLDLSDCG 153
             +G           LP  I  M   SD+   G ++        S+       + L  C 
Sbjct: 756 KIKG------KGMLRLPSSIFRMPNLSDITANGCILSKLDDKFSSMVFTCPNDIKLKKCN 809

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI-NCLFNLEKLKLEDCKRLQSLPQLPPN 212
           L +  +P  +    +++ L LS N+F  LP  I +C F L KL L+DCK L+ +  +PPN
Sbjct: 810 LSDEFLPILVMWSANVEILDLSGNSFTILPECIKDCRF-LSKLTLDDCKCLREIRGIPPN 868

Query: 213 VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
           ++ +    C SL           SSC             KN L    L E      A   
Sbjct: 869 LKYLSAKCCKSLT----------SSC-------------KNMLLNQELHE------AGDT 899

Query: 273 KFSIVVPGSEIPKWFMYQNEGSSIT 297
           KF      ++IP+WF +QN G++I+
Sbjct: 900 KFCF-SGFAKIPEWFEHQNMGNTIS 923


>gi|108738430|gb|ABG00748.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738470|gb|ABG00768.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738480|gb|ABG00773.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738482|gb|ABG00774.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738500|gb|ABG00783.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738508|gb|ABG00787.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738516|gb|ABG00791.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738518|gb|ABG00792.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738532|gb|ABG00799.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738535|gb|ABG00800.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQE------LPLC 189

Query: 121 INLMRR-----SSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 IGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT-SLSKIPDSIYELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKHVP 281



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++  L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 27/209 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ELLLD T IK +P SI  L  L  L+L+GCK +  LP  I +LKSL+ L  L   
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKL-YLDDT 204

Query: 61  KFENLLETVGQVESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             +NL  ++G +++L++L  +  T++   P SI+ +K+LK L   G      SA   LP 
Sbjct: 205 ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFING------SAVEELP- 257

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
               ++ SS      LPSL    +       DC   +  +PS IG L+SL  L LS    
Sbjct: 258 ----LKPSS------LPSLYDFSA------GDCKFLK-HVPSSIGRLNSLLQLQLSSTPI 300

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             LP  I  L  + +L+L +CK L+ LP+
Sbjct: 301 EALPEEIGALHFIRELELRNCKFLKFLPK 329



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L ++P +I  LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   +++  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKHVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|302762216|ref|XP_002964530.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
 gi|300168259|gb|EFJ34863.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
          Length = 299

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L    I ++P SI  LS L  L L+    L  LP  I  L SLK LN+      E
Sbjct: 36  LRVLELSGNRIVKLPDSIGELSQLTVLDLQS-NQLTALPDTIGRLTSLKQLNIEKN-GIE 93

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFR-GCNGPPSSASCYLPFPIN 122
            L  T+G  ESLEEL      ++  P ++  + NL+ LS    C     S   YL     
Sbjct: 94  ELPWTIGNCESLEELRADFNQLKALPEAVGYLGNLRILSVHLNCLKSLPSTMAYLTSLAE 153

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           L    + L ++   SL  + +L KLD+S        +P  IGNLH L+ L +S N+ + L
Sbjct: 154 LDVHFNQLESVP-ESLCFVTTLRKLDISSNFHALRFLPYKIGNLHQLEELDISYNSILEL 212

Query: 183 PASINCLFNLEKLKLE 198
           P S   L NL KL+LE
Sbjct: 213 PDSFVQLENLRKLRLE 228


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 107/214 (50%), Gaps = 17/214 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L    +  +P  I  L  L +L L   + L  LP  I  L++L+ LNL    
Sbjct: 34  LQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQ-LTTLPKEIGQLQNLQKLNL-NSN 91

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L+ LD+    +   P  I+ ++NL+TL   G N         LP  
Sbjct: 92  QLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDL-GRN-----QLTTLPEE 145

Query: 121 I-NLMR-RSSDLGALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I NL   ++ DLG   L +L      L +L  LDL    L    +P +IGNL +L+TL L
Sbjct: 146 IWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLA--TLPEEIGNLQNLQTLDL 203

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             N   TLP  I  L NL+KL L +  RL +LP+
Sbjct: 204 EGNQLTTLPKEIGKLQNLKKLYLYN-NRLTTLPK 236



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 19/235 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L    +  +P  I  L  L +L L   + L  L   I +L++L+TL+L G  
Sbjct: 57  LQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQ-LTTLSKEIGNLQNLQTLDL-GRN 114

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E +  +++L+ LD+    +   P  I+ ++NL+TL   G N         LP  
Sbjct: 115 QLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDL-GRN-----QLTTLPEE 168

Query: 121 INLMR--RSSDLGALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++  ++ DL    L +L      L +L  LDL    L    +P +IG L +LK LYL
Sbjct: 169 IGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLT--TLPKEIGKLQNLKKLYL 226

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV--NGCASLVTL 227
             N   TLP  +  L NL++L L +  RL +LP+   +++ +++   G   L TL
Sbjct: 227 YNNRLTTLPKEVGKLQNLQELYLYN-NRLTTLPKEIEDLQNLKILSLGSNQLTTL 280



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 28/208 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L    +  +P  +  L  L +L L   + L  LP  I  L++LK L+L G  
Sbjct: 218 LQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNR-LTTLPKEIEDLQNLKILSL-GSN 275

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + VG++++L+EL +    +   P  I  ++NL+ L+        S+    LP  
Sbjct: 276 QLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLN------SNQFTTLPKE 329

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L  L KL L    L    +P +I NL +LKTL L  N   
Sbjct: 330 I-----------------WNLQKLQKLSLGRNQLT--TLPEEIWNLQNLKTLDLEGNQLA 370

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           TLP  I  L NL+KL LE   +L +LP+
Sbjct: 371 TLPEEIGNLQNLQKLDLE-GNQLTTLPK 397



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 16/173 (9%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR--R 126
           +G++++L +LD+S   +   P  I  ++NL+ L          +    LP  I  ++  +
Sbjct: 31  IGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLS------HNQLTTLPKEIGQLQNLQ 84

Query: 127 SSDLGALMLPSLSG-LGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
             +L +  L +LS  +G+L  L   D G  +   +P +I NL +L+TL L +N   TLP 
Sbjct: 85  KLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPE 144

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
            I  L NL+ L L    +L +LP+   N++ ++      N  A+L   +G L+
Sbjct: 145 EIWNLQNLQTLDL-GRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQ 196



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 38/227 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +  +P  IE L  L  L+L G   L  LP  +  L++L+ L L    
Sbjct: 241 LQNLQELYLYNNRLTTLPKEIEDLQNLKILSL-GSNQLTTLPKEVGKLQNLQELYLYNN- 298

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L++L+++       P  I+ ++ L+ LS  G N         LP  
Sbjct: 299 RLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSL-GRN-----QLTTLPEE 352

Query: 121 I-NLMR-RSSDLGALMLPSL----SGLGSLTKLDLSDCGLGE------------------ 156
           I NL   ++ DL    L +L      L +L KLDL    L                    
Sbjct: 353 IWNLQNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYN 412

Query: 157 ---GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
                +P +IGNL  L+TL L  N   TLP  I    NL+KLK+ D 
Sbjct: 413 NRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIG---NLQKLKMLDL 456



 Score = 38.5 bits (88), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP----QLPPNV 213
            +P +IG L +L+ L LS N  +TLP  I  L NL+KL L    +L +LP    QL  N+
Sbjct: 26  TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDL-SHNQLTTLPKEIGQL-QNL 83

Query: 214 EKVRVNGCASLVTL 227
           +K+ +N    L TL
Sbjct: 84  QKLNLN-SNQLTTL 96


>gi|168067847|ref|XP_001785816.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662540|gb|EDQ49380.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 307

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           L+GL++L L GC  L  L +    +K+L+   L  C    NL  ++GQ+ S+ ELD SG 
Sbjct: 11  LTGLLELHLIGCNKLHDLTAEFADMKNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGC 70

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNG----PP--------------SSASCYLPFPINLM 124
           T I   PS I  ++ L  L+   C      PP               S    LP  I  +
Sbjct: 71  TNIATLPSEIGNVQTLLKLNLVLCKCLVRLPPEIGNLKNLTHLYLGQSGITSLPAEIGKL 130

Query: 125 RRSSDL---GALML----PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SK 176
           R   DL   G + L    P +  L SL +L+L  C  G   +PS+ G + SL+ L L S 
Sbjct: 131 RSLEDLSLTGCVRLEKLPPQIGQLTSLQRLNLGSCT-GIKELPSEFGGMISLQKLVLNSC 189

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL---LGA 230
                LP  +  L NL+ L+L+  K L  LP    N   ++++ +N C  L  L   +G+
Sbjct: 190 TALARLPDELFDLVNLQSLELDYMKLLAHLPAEIGNLRSLQRLSLNCCTRLNRLPPEIGS 249

Query: 231 LKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEV-----VSAPSHKFSIVVPGSEIPK 285
           L            +  L L+G  GL   +  E L++     V       ++V+ G   P 
Sbjct: 250 LP----------ALQVLNLVGCTGLKPELPMEILKMQKENAVYVHREDDAVVLEGPNNPS 299

Query: 286 WFMY 289
           + +Y
Sbjct: 300 YKLY 303



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 18/236 (7%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M+ LR+  L+    I+ +  SI  L+ + +L   GC N+  LPS I ++++L  LNL+ C
Sbjct: 35  MKNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGCTNIATLPSEIGNVQTLLKLNLVLC 94

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASC 115
                L   +G +++L  L +  + I   P+ I  +++L+ LS  GC      PP     
Sbjct: 95  KCLVRLPPEIGNLKNLTHLYLGQSGITSLPAEIGKLRSLEDLSLTGCVRLEKLPPQIGQL 154

Query: 116 YLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                +NL    S  G   LPS   G+ SL KL L+ C      +P ++ +L +L++L L
Sbjct: 155 TSLQRLNL---GSCTGIKELPSEFGGMISLQKLVLNSCT-ALARLPDELFDLVNLQSLEL 210

Query: 175 SKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLP-----PNVEKVRVNGCASL 224
                +  LPA I  L +L++L L  C RL  LP  P     P ++ + + GC  L
Sbjct: 211 DYMKLLAHLPAEIGNLRSLQRLSLNCCTRLNRLP--PEIGSLPALQVLNLVGCTGL 264



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 24/165 (14%)

Query: 44  NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLS 102
           +I  L  L  L+L+GC K  +L      +++L +  +    +IR    SI  + +++ L 
Sbjct: 7   HILQLTGLLELHLIGCNKLHDLTAEFADMKNLRKFRLENCLSIRNLHRSIGQLASIRELD 66

Query: 103 FRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
           F GC               N+    S++G         + +L KL+L  C      +P +
Sbjct: 67  FSGCT--------------NIATLPSEIG--------NVQTLLKLNLVLCKC-LVRLPPE 103

Query: 163 IGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           IGNL +L  LYL ++   +LPA I  L +LE L L  C RL+ LP
Sbjct: 104 IGNLKNLTHLYLGQSGITSLPAEIGKLRSLEDLSLTGCVRLEKLP 148


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 19/176 (10%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
             + L  LP  I  L++LK+L+L    +F+ L + +GQ+++L+EL++    ++  P  I 
Sbjct: 56  SSQKLTTLPKEIKQLQNLKSLDL-ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIG 114

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPI------NLMRRSSDLGAL--MLPSLSGLGSLT 145
            ++NL+TL          S +    FP       NL + + D   L  +L  +  L SL 
Sbjct: 115 QLQNLQTLIL--------SVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           KL+L    L   A+P++IG L +L+ LYLS N    LP  I  L NL+ L L D +
Sbjct: 167 KLNLDKNRL--KALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQ 220



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 13/211 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +K +P  I  L  L  L L     L   P  I  LK+L+ LNL    
Sbjct: 93  LQNLQELNLWNNQLKNLPKEIGQLQNLQTLIL-SVNRLTTFPQEIGQLKNLQKLNL-DYN 150

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   LL+ +GQ++SL++L++    ++  P+ I  ++NL+ L         ++    LP  
Sbjct: 151 QLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYL------SNNQLTILPEE 204

Query: 121 INLMR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSK 176
           I  ++  ++  LG   L  L   +G L  L L      E  I P +IG L  L+ LYLS 
Sbjct: 205 IGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSH 264

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           N   TLP  I  L NL++L L D  +L +LP
Sbjct: 265 NQLTTLPKEIGQLENLQELYLND-NQLTTLP 294


>gi|357519065|ref|XP_003629821.1| Resistance protein [Medicago truncatula]
 gi|355523843|gb|AET04297.1| Resistance protein [Medicago truncatula]
          Length = 780

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 120/289 (41%), Gaps = 47/289 (16%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L  L  L+ KGC  L R P     LKSL+ LNL  C   +N  + + + E++ EL 
Sbjct: 438 SVGFLDKLKVLSAKGCSKLRRFPPI--KLKSLEQLNLSFCKSLKNFPQILWKKENITELG 495

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL-PFPINLMRRSSDLGALMLP-- 136
           +  T I+  P S   +  L+TL    C       + ++ P  +N+    S     +LP  
Sbjct: 496 LEETPIKEFPCSFQSLTRLQTLQLHYCGTFRLPNNIFMMPNLVNITAWKSQ--GWILPKQ 553

Query: 137 ------SLSGLGS-LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
                  +S + S + +L L  C L +   PS +    ++K L L+ NNF  LP  I   
Sbjct: 554 DEGEQRDISIVSSNVERLHLIFCILSDDFFPSGLTWFRNVKELSLAHNNFTILPECIQEC 613

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
             L  L L+ C+ LQ +  + PN+E    + C               S T ID + + +L
Sbjct: 614 HFLTDLNLDYCQYLQEVRGIVPNLEIFSASHC--------------RSWTCIDMLLNQEL 659

Query: 250 LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
            G       +                   PG+ I  WF +++ G SI++
Sbjct: 660 HGNRNTMFYL-------------------PGARILNWFEHRSSGQSISL 689


>gi|398334690|ref|ZP_10519395.1| lipoprotein [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
          Length = 345

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 16/206 (7%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +REL L   +I  +P  IE    L  L L    NL  LP  I  LK+LK+LNL G     
Sbjct: 60  VRELNLSWQEITSLPSDIERFQNLKSLNL-FKNNLESLPVEIGKLKNLKSLNL-GLNPLI 117

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
              + + Q+  L ELD SG  +   P  I  +KNL  L+  G      +    LP  I +
Sbjct: 118 TFPKEIEQLNDLLELDFSGNKLEVLPPEILQLKNLTDLNLLG------NELTALPIEIGV 171

Query: 124 MRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           ++    L       + LP   G L +L +L +    L   +IP +IG L SLK L LS+N
Sbjct: 172 LQNLQKLNLYSNELIRLPREIGQLQNLQELSIHYNKLV--SIPEEIGQLKSLKILNLSQN 229

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRL 203
            F +LP  I  L NL++L L +  +L
Sbjct: 230 QFTSLPEEIRELHNLKELDLSNNPQL 255


>gi|356522390|ref|XP_003529829.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1086

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 45/303 (14%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL L  + +K++  ++  L  +  L L     L  LP +++   +LK ++L  C  
Sbjct: 648 ENLVELNLPYSRVKKLWQAVPDLVNMRILILHSSTQLKELP-DLSKATNLKVMDLRFCVG 706

Query: 62  FENLLETVGQVESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             ++  +V  ++ LE+L + G  ++R   S+I L  +L+ LS  GC     S   +    
Sbjct: 707 LTSVHPSVFSLKKLEKLYLGGCFSLRSLRSNIHL-DSLRYLSLYGC----MSLKYFSVTS 761

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
            N++R + +L ++                         +PS IG    L+ L L+     
Sbjct: 762 KNMVRLNLELTSI-----------------------KQLPSSIGLQSKLEKLRLAYTYIE 798

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL------GALKLR 234
            LP SI  L  L  L +  C+ L++LP+LPP++E +   GC SL T++        LK  
Sbjct: 799 NLPTSIKHLTKLRHLDVRHCRELRTLPELPPSLETLDARGCVSLETVMFPSTAGEQLKEN 858

Query: 235 KS-----SCTIIDFVDSLKLLGKNGLAISMLREFLEVVS--APSHKFSIVVPGSEIPKWF 287
           K      +C  +D   SLK +  N   I+M++   + +S    +H+ + V PGS++P+W 
Sbjct: 859 KKRVAFWNCLKLD-EHSLKAIELNA-QINMMKFAHQHLSTFGDAHQGTYVYPGSKVPEWL 916

Query: 288 MYQ 290
           +++
Sbjct: 917 VHK 919


>gi|218196498|gb|EEC78925.1| hypothetical protein OsI_19343 [Oryza sativa Indica Group]
          Length = 1308

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 27/225 (12%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L +   I ++P SI  L  L  L L GC +LV  P +   L++L+ L+L GC +   L E
Sbjct: 594 LRESPKISKLPESIGKLEALTYLNLSGCSHLVEFPESFGELRNLEHLDLSGCSRLVELPE 653

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN----------------GPPS 111
           TVG++++L  L++SG+ I   P S   +KNL  L    C                  P  
Sbjct: 654 TVGKLDALMYLNLSGSRIVELPESFRELKNLVHLDLSNCTHLTDVSEHLGSLNRLYRPRL 713

Query: 112 SASCYLPFPINLMRRSSDLGALMLPSLSG-------LGSLTKLDLSDCGL-GEGAIPSDI 163
            + C + +P    R+  +L ++   + +        + ++++L  SD G    G +   +
Sbjct: 714 YSRCLVAYPRR--RKIQELSSVQKENEASHIHMQNVMDAISRLVYSDSGYSARGILSEAL 771

Query: 164 GNLHSLKTLYLSKNNF-VTLPASINCLFNLEKLKLEDCKRLQSLP 207
           G+L  LK L LS     V LP S   L NL  L L  C  L+  P
Sbjct: 772 GSLTELKYLNLSGCLLMVVLPGSFGNLENLVHLDLSGCSCLEWTP 816



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  ++++ ++  D+ E+P S+     L +L L  C  L  LP +   L SLK+L ++GC 
Sbjct: 1171 LSSIKQITVECQDMVELPASLCQFKSLPKLILWKCLKLKSLPESTKHLTSLKSLWMVGCS 1230

Query: 61   KFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGC 106
               +L E +G + SL EL+I+    ++  P SI L+  L+ +    C
Sbjct: 1231 SMTSLPEGLGHLASLMELNINDCPHLKSLPESIQLLPMLEVVKVSYC 1277



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 25/159 (15%)

Query: 51  LKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
           ++ L+L+GC K +         + L  LD++  +I+  P SI+ +K L+ L        P
Sbjct: 519 IRALHLVGCSKTKLNDGAFSSAKCLRVLDLNHCSIQKLPDSIYQLKQLQYLHA------P 572

Query: 111 SSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                 +P  I+++ + + L     P +S L                  P  IG L +L 
Sbjct: 573 QVRDGVIPESISMLSKLNYLNLRESPKISKL------------------PESIGKLEALT 614

Query: 171 TLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            L LS  ++ V  P S   L NLE L L  C RL  LP+
Sbjct: 615 YLNLSGCSHLVEFPESFGELRNLEHLDLSGCSRLVELPE 653



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 137  SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKL 195
            SL    SL KL L  C L   ++P    +L SLK+L++   ++  +LP  +  L +L +L
Sbjct: 1190 SLCQFKSLPKLILWKC-LKLKSLPESTKHLTSLKSLWMVGCSSMTSLPEGLGHLASLMEL 1248

Query: 196  KLEDCKRLQSLP---QLPPNVEKVRVNGCASL 224
             + DC  L+SLP   QL P +E V+V+ C  L
Sbjct: 1249 NINDCPHLKSLPESIQLLPMLEVVKVSYCPEL 1280


>gi|3860165|gb|AAC72978.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1221

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 15/201 (7%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L +L L+ C +LV LPS+I  L SL+ L+L  C      L + G   
Sbjct: 712 LKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVE-LPSFGNAT 769

Query: 74  SLEELDIS--GTAIRCPPSSIFLMKNLKTLSFRGCNGP---PSSASCYLPFPINLMRRSS 128
            LE L++    + ++ PPS      NL+ LS   C+     P+  +    + +NL+  SS
Sbjct: 770 KLEILNLENCSSLVKLPPS--INANNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSS 827

Query: 129 DLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
               + LP S+    +L  LD   C      +PS IG++ +L+  YLS  +N V LP+SI
Sbjct: 828 ---LIELPLSIGTATNLKHLDFRGCS-SLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSI 883

Query: 187 NCLFNLEKLKLEDCKRLQSLP 207
             L  L  L +  C +L++LP
Sbjct: 884 GNLRKLTLLLMRGCSKLETLP 904



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 39/252 (15%)

Query: 4    LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            L+EL L + + + E+P +IE  + L +L L  C +L+ LP +I +  +LK L+  GC   
Sbjct: 794  LQELSLTNCSRVVELP-AIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSL 852

Query: 63   ENLLETVGQVESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L  ++G + +LE   +S  +     PSSI  ++ L  L  RGC+   +     LP  I
Sbjct: 853  VKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLET-----LPTNI 907

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLD-----LSDCGLGEGAIPSDIGN----------- 165
            NL      L  L L   S L S  ++      L   G     +P  I +           
Sbjct: 908  NL----KSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPLSIMSWSPLAHFQISY 963

Query: 166  ----------LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
                      L  +  L LSK +   +P  +  +  L  L+L +C  L SLPQLP ++  
Sbjct: 964  FESLKEFPHALDIITELQLSK-DIQEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAY 1022

Query: 216  VRVNGCASLVTL 227
            +  + C SL  L
Sbjct: 1023 LYADNCKSLERL 1034



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFL 94
           C   + LPS  NS + L  L++    K + L E   Q+ +L+ +D+S ++      ++  
Sbjct: 663 CYQNICLPSTFNS-EFLVELDM-SFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLST 720

Query: 95  MKNLKTLSFRGCNG---PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
             NL+ L  R C+     PSS        I  + R S L  + LPS      L  L+L +
Sbjct: 721 ATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSL--VELPSFGNATKLEILNLEN 778

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP--- 207
           C      +P  I N ++L+ L L+  +  V LPA  N   NL KL L +C  L  LP   
Sbjct: 779 CS-SLVKLPPSI-NANNLQELSLTNCSRVVELPAIENAT-NLWKLNLLNCSSLIELPLSI 835

Query: 208 QLPPNVEKVRVNGCASLVTL 227
               N++ +   GC+SLV L
Sbjct: 836 GTATNLKHLDFRGCSSLVKL 855


>gi|410684754|ref|YP_006060761.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CMR15]
 gi|299069243|emb|CBJ40503.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CMR15]
          Length = 754

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 98/212 (46%), Gaps = 34/212 (16%)

Query: 3   CLRELLLDKTDIKEMPLSIE---LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
            L+EL +D+  + ++P        L  L  L+L   K L  LP+N+ +L  LKTL L G 
Sbjct: 221 ALQELTVDEPSLAKLPPDFGAGGTLGKLAHLSLSNTK-LRELPANLGNLSGLKTLTLQGN 279

Query: 60  FKFENLLETVGQVESLEELDISGTAIRC--PPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
            K E L  + GQ+  LE L + G  I+   P S +  +K LK            ++   L
Sbjct: 280 QKLEALPPSFGQLTGLEMLSLVGNHIKSLPPMSGVSALKKLKI---------DDASLASL 330

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           P          D GA          +LT L LS+  L    +PS I  L  L+ L L+ N
Sbjct: 331 P---------RDFGAQH-------KALTNLSLSNTQLS--TLPSSIEKLSHLQELKLNDN 372

Query: 178 -NFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
               TLP S+  +  L+KL L  CKRL+SLPQ
Sbjct: 373 TQLRTLPDSLTKMKRLQKLDLSGCKRLESLPQ 404



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 48/79 (60%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           + L  L L  T +  +P SIE LS L +L L     L  LP ++  +K L+ L+L GC +
Sbjct: 339 KALTNLSLSNTQLSTLPSSIEKLSHLQELKLNDNTQLRTLPDSLTKMKRLQKLDLSGCKR 398

Query: 62  FENLLETVGQVESLEELDI 80
            E+L +++G++ +L+ELD+
Sbjct: 399 LESLPQSIGKISTLQELDL 417



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 50/203 (24%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           +EL+L    I  +P ++  ++ L  +    C +L  L   + +L+ L+TL+L G  K   
Sbjct: 39  KELVLTSLPIARLPDAVFNMTQLKAIRTDHC-DLRELSPALQNLRQLETLSLSGAGKLNA 97

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           L   VGQ+  L+EL +  T I+                                      
Sbjct: 98  LPHAVGQLPRLQELRLVDTGIQA------------------------------------- 120

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                     LP + G  +L ++ +S+  L   A+P D+G L  L  L LS      LPA
Sbjct: 121 ----------LPPMGGASALKEITVSNAPL--AALPDDLGALRKLAHLSLSGTQLRELPA 168

Query: 185 SINCLFNLEKLKLEDCKRLQSLP 207
           S   L  L+ L L D K+L  LP
Sbjct: 169 STGYLSALQTLSLRDNKKLSGLP 191



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 4   LRELLL-DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L D T ++ +P S+  +  L +L L GCK L  LP +I  + +L+ L+LL C + 
Sbjct: 364 LQELKLNDNTQLRTLPDSLTKMKRLQKLDLSGCKRLESLPQSIGKISTLQELDLLNCTRL 423


>gi|357506067|ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1204

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 161/378 (42%), Gaps = 44/378 (11%)

Query: 20   SIELLSGLVQLTLKGCKNLVRLP-SNINSLKSLKTLNLLGCFKFENLLETVGQVESLEEL 78
            SI LL  L  L+L+ C +LV      ++   SL+ L L GC K EN  +   ++ +LE L
Sbjct: 642  SIGLLRELQFLSLQNCTSLVCFEFGRVSESSSLRVLCLSGCTKLENTPD-FEKLLNLEYL 700

Query: 79   DISG-TAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLM--RRSSDLG 131
            D+   T++     SI  +  L+ LS RGC      P S  +      ++L    R ++L 
Sbjct: 701  DMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGCSRFTNLP 760

Query: 132  ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
               + S     SL  LDLS C +    +P  IG L  L+ L L  NNF  LP +I  L +
Sbjct: 761  LGSVSSFHTQQSLISLDLSFCNIS--IVPDAIGELRGLERLNLQGNNFTELPCTIQRLSS 818

Query: 192  LEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID--FVDSLKL 249
            L  L L  C RLQ  P +P  +E    +       +    +  +S   I D   + +  L
Sbjct: 819  LAYLNLSHCHRLQIWPLIP--IESCPSDSVGRYFKIKSGSRDHRSGLYIFDCPKLATGFL 876

Query: 250  LGKNGLAISMLREFLEVVSAPSH---KFSIVVPGSEIPKWFMYQNEGSSITVTRPSYL-- 304
            +     +  + +    +V  P H    F I++P  +   +F   ++ +S+   + S +  
Sbjct: 877  MTNRERSAYLFKWLRRLVEEPRHFRCGFDIIIPLRQ--GYFPCGSDWNSVLRIKESDIDV 934

Query: 305  -CNMNQVVGYAACRVFHVPKHSTGIRRFYR-----YPHPAHVLHCS--MDEKFG------ 350
             C      GY    VF +  HS      ++      PHP ++   S   +E+F       
Sbjct: 935  DCR-----GYLFSIVFKMNNHSEVSDSPHQSLSSPMPHPFYLSFESEHTEERFDIPLNLE 989

Query: 351  ---HRGSDHLWLLYLPRQ 365
                 GS ++W +Y+ R+
Sbjct: 990  QNVVDGSTYIWTIYISRE 1007



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL----LE 67
           T + ++  SI  L+ L  L+L+GC NLV +P + N++ +L TL+L GC +F NL    + 
Sbjct: 706 TSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGCSRFTNLPLGSVS 765

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           +    +SL  LD+S   I   P +I  ++ L+ L+ +G N
Sbjct: 766 SFHTQQSLISLDLSFCNISIVPDAIGELRGLERLNLQGNN 805


>gi|345291871|gb|AEN82427.1| AT4G12010-like protein, partial [Capsella grandiflora]
          Length = 167

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 89/185 (48%), Gaps = 21/185 (11%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           LLLD T IK +P S E LS L  L LK CK L  L  ++  LK L+ L L GC + E   
Sbjct: 4   LLLDGTAIKSLPESXETLSKLALLNLKNCKKLKHLSXDLYKLKCLQELILSGCTQLEXFP 63

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E    +ESLE L +  TAI   P  + L  N+KT S  G N   S  S  + F       
Sbjct: 64  EIKEDMESLEILLLDDTAITEXPKXMXL-SNIKTFSLCGTN---SQVSVXMFF------- 112

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                   +P   G   LT L LS C L +  +P +IG L SL++L LS NN   LP   
Sbjct: 113 --------MPPTXGCSRLTDLYLSRCSLYK--LPGNIGGLSSLQSLCLSGNNIENLPEXF 162

Query: 187 NCLFN 191
           N L N
Sbjct: 163 NQLHN 167


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 19/174 (10%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
             + L  LP  I  L++LK+L+L    +F+ L + +GQ+++L+EL++    ++  P  I 
Sbjct: 56  SSQKLTTLPKEIKQLQNLKSLDL-ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIG 114

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPI------NLMRRSSDLGAL--MLPSLSGLGSLT 145
            ++NL+TL          S +    FP       NL + + D   L  +L  +  L SL 
Sbjct: 115 QLQNLQTLIL--------SVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
           KL+L    L   A+P++IG L +L+ LYLS N    LP  I  L NL+ L L D
Sbjct: 167 KLNLDKNRLK--ALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGD 218



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 28/207 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +K +P  I  L  L  L L     L   P  I  LK+L+ LNL    
Sbjct: 93  LQNLQELNLWNNQLKNLPKEIGQLQNLQTLIL-SVNRLTTFPQEIGQLKNLQKLNL-DYN 150

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   LL+ +GQ++SL++L++    ++  P+ I  ++NL+ L         ++    LP  
Sbjct: 151 QLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYL------SNNQLTILPEE 204

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L AL+L    G   LT             +P +IG L +LK LY   N   
Sbjct: 205 IGQLK---NLQALIL----GDNQLT------------ILPKEIGQLQNLKLLYSVNNELT 245

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLP 207
           TLP  I  L NL++L L D  +L +LP
Sbjct: 246 TLPKEIGQLENLQELYLND-NQLTTLP 271



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 22/135 (16%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK---- 196
           L +L +L+L +  L    +P +IG L +L+TL LS N   T P  I  L NL+KL     
Sbjct: 93  LQNLQELNLWNNQLKN--LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYN 150

Query: 197 -----LEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK---LRKSSCTII-DFVDSL 247
                L++  +LQSL +L  N++K R+    + +  L  L+   L  +  TI+ + +  L
Sbjct: 151 QLTTLLQEIGQLQSLQKL--NLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQL 208

Query: 248 K-----LLGKNGLAI 257
           K     +LG N L I
Sbjct: 209 KNLQALILGDNQLTI 223


>gi|147828745|emb|CAN72925.1| hypothetical protein VITISV_027143 [Vitis vinifera]
          Length = 726

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 169/444 (38%), Gaps = 97/444 (21%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVG---QVESLEELDISGTAIR 86
           + L   + L+++P   + +  L+ LNL GC  F  L  ++G   +++   EL+ S + I 
Sbjct: 297 IDLSNSQQLIKIPK-FSRMPKLEKLNLEGCVSFNKLHSSIGTFSEMKFFRELNFSESGIG 355

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             PSSI  + +L+TL+   C       S +  FP         L  L L        L  
Sbjct: 356 EFPSSIGSLISLETLNLSKC-------SKFEKFPDIFFVNMRHLKTLRLSDSGHFPRLLY 408

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSK------------------------------ 176
           L L  C     ++PS+I  L SL+  YL+                               
Sbjct: 409 LHLRKCK-NLRSVPSNILQLESLQICYLNDCSNLEIFPEIMEHSKGLSLRQKYLGRLELS 467

Query: 177 --NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ--LPPNVEKVRVNGCASLVTLLGALK 232
              N  TLP+SI  L  L  L + +C +L  LP       +E++ V+GC  +    GA+ 
Sbjct: 468 NCENLETLPSSIGNLTGLHALLVRNCPKLHKLPDNLRSMQLEELDVSGCNLMA---GAIP 524

Query: 233 LRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVV-----SAPSHKFSIVVPGSEIPKWF 287
                       D L  L     ++  L E+ E       S   H   I++    IP W 
Sbjct: 525 ------------DDLWCL----FSLQSLNEYFEWATYWEDSEDYHVHVIILGRRGIPXWI 568

Query: 288 MYQNEGSSITVTRPSYLCNMNQVVGYAA-CRVFHVP---KHSTGI---------RRFYRY 334
            +++ G  IT+  P      N  +G+A  C   HVP   ++  G+          +F   
Sbjct: 569 SHKSMGDEITIDLPKNWYEDNNFLGFALFCH--HVPIDDENEXGLDLQLLISDGDQFGHM 626

Query: 335 PHPAHVLHCSMDEKFGHRGSD-HLWLLYLPR---QSYYCNVKWHFESNHFRLSFMDEREK 390
                  + S+D K     +D  L ++Y P+    S Y + +W    N F+  F      
Sbjct: 627 ETIQFFPNYSLDMKNSTLLADPXLMVVYFPQIXISSEYRSNRW----NKFKTRF----SA 678

Query: 391 HCPAGSGTGLKVKRCGFHPGYMHE 414
            C  G  T  KV+ CG H  Y  +
Sbjct: 679 LCGWGDKTAFKVESCGIHLIYAQD 702


>gi|297836995|ref|XP_002886379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332220|gb|EFH62638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1092

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 139/313 (44%), Gaps = 51/313 (16%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL  + + ++++    E+L+ L ++ L   +NL +LP ++    +L+ L+LL C  
Sbjct: 601 EYLVELNFENSKLEKLWEGREVLTNLKKINLALSRNLKKLP-DLTYATNLEELSLLRCES 659

Query: 62  FENLLETVGQVESLEELDI-SGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASC- 115
            E +  +   +  L  L + S  +I   P+ + L  +L+ +S  GC    N P  S +  
Sbjct: 660 LEAIPSSFSHLHKLHRLLMNSCISIEVIPAHMNL-ASLEQVSMAGCSSLRNIPLMSTNIT 718

Query: 116 ----------YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
                     YLP  I L  R   L      +  GL  L               P+    
Sbjct: 719 NLYISDTEVEYLPASIGLCSRLEFLHITRNRNFKGLSHL---------------PT---- 759

Query: 166 LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
             SL+TL L   +   +P  I  L  LE L L +C++L SLP+LP ++  +    C SL 
Sbjct: 760 --SLRTLNLRGTDIERIPDCIKDLHRLETLDLSECRKLASLPELPGSLSSLMARDCESLE 817

Query: 226 TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
           T+   +    +  T IDF +  KL  +  L  S+ + F  V          ++PG E+P 
Sbjct: 818 TVFCPM---NTPNTRIDFTNCFKLC-QEALRASIQQSFFLV--------DALLPGREMPA 865

Query: 286 WFMYQNEGSSITV 298
            F ++ +G+S+T+
Sbjct: 866 VFDHRAKGNSLTI 878


>gi|108738558|gb|ABG00811.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 27/196 (13%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E +G + SL+EL + GTAI+  P SI  ++NL+ LS RGC          LP  
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQ------ELPLC 189

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
           I  ++                 SL KL L D  L    +PS IG+L +L+ L+L +  + 
Sbjct: 190 IGTLK-----------------SLEKLYLDDTALKN--LPSSIGDLKNLQDLHLVRCTSL 230

Query: 180 VTLPASINCLFNLEKL 195
              P SIN L +L+KL
Sbjct: 231 SKXPDSINELKSLKKL 246



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 108/209 (51%), Gaps = 27/209 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ELLLD T IK +P SI  L  L  L+L+GCK +  LP  I +LKSL+ L  L   
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKL-YLDDT 204

Query: 61  KFENLLETVGQVESLEELD-ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             +NL  ++G +++L++L  +  T++   P SI  +K+LK L   G      SA   LP 
Sbjct: 205 ALKNLPSSIGDLKNLQDLHLVRCTSLSKXPDSINELKSLKKLFING------SAVEELP- 257

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
               ++ SS      LPSL    +       DC   +  +PS IG L+SL  L LS    
Sbjct: 258 ----LKPSS------LPSLYDFSA------GDCKFLK-QVPSSIGRLNSLLQLQLSSTPI 300

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             LP  I  L  + +L+L +CK L+ LP+
Sbjct: 301 EALPEEIGALHFIRELELRNCKFLKFLPK 329



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLG-- 58
           ++ L +L LD T +K +P SI  L  L  L L  C +L + P +IN LKSLK L + G  
Sbjct: 193 LKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKXPDSINELKSLKKLFINGSA 252

Query: 59  ---------------------CFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                                C   + +  ++G++ SL +L +S T I   P  I  +  
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHF 312

Query: 98  LKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDC 152
           ++ L  R C      P S       + +NL    S++    LP   G L  L +L +S+C
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNL--EGSNIEE--LPEEFGKLEKLVELRMSNC 368

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
            + +  +P   G+L SL  LY+ +     LP S   L NL  L++
Sbjct: 369 KMLK-RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 412


>gi|168010570|ref|XP_001757977.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690854|gb|EDQ77219.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 294

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 29/245 (11%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L+D + +K +P  ++ LS L +L L  C +L  LP+ + +L SLK LNL  C  F
Sbjct: 44  LKELYLVDCSSLKSLPNELKNLSSLERLDLSHCSSLTSLPNELENLSSLKILNLSHCSSF 103

Query: 63  -ENLLETVGQVESLEELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             +L   +  + SL+ LD+S  +++ C P+ +  + +LK L+  GC          +  P
Sbjct: 104 LTSLPNDLANLSSLKRLDLSHCSSLICLPNDMANLSSLKKLNLSGCLS-------LICLP 156

Query: 121 INLMRRSS----DL-GALMLPS----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
            ++   SS    DL G L L S    L  L SLTKL L+ C   + AI      L SL T
Sbjct: 157 NDMANLSSLIKLDLSGCLSLNSLPNILKNLSSLTKLSLNSCSSYDLAI------LSSLTT 210

Query: 172 LYL-SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
           L L   ++ ++LP  +  L +L +L L  C  L SLP    N+  ++   ++GC+SL +L
Sbjct: 211 LSLICCSSLISLPNELANLSSLIRLDLSGCLSLTSLPNELTNLSSLKRLDLSGCSSLTSL 270

Query: 228 LGALK 232
              LK
Sbjct: 271 PNELK 275



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 29/218 (13%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +  +P  +  LS L  L L  C +L+ LP+++  + SLK L L+ C   ++L   +  
Sbjct: 5   TSLTSLPNEMANLSSLRSLHLNWCTSLLSLPNDLRKISSLKELYLVDCSSLKSLPNELKN 64

Query: 72  VESLEELDIS-GTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SLE LD+S  +++   P+ +  + +LK L+   C+   +S                  
Sbjct: 65  LSSLERLDLSHCSSLTSLPNELENLSSLKILNLSHCSSFLTS------------------ 106

Query: 131 GALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLPASINC 188
               LP+ L+ L SL +LDLS C      +P+D+ NL SLK L LS   + + LP  +  
Sbjct: 107 ----LPNDLANLSSLKRLDLSHCS-SLICLPNDMANLSSLKKLNLSGCLSLICLPNDMAN 161

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCAS 223
           L +L KL L  C  L SLP +  N+    K+ +N C+S
Sbjct: 162 LSSLIKLDLSGCLSLNSLPNILKNLSSLTKLSLNSCSS 199



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 20/202 (9%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  LS L +L L  C +L+ LP+++ +L SLK LNL GC     L   +  + 
Sbjct: 104 LTSLPNDLANLSSLKRLDLSHCSSLICLPNDMANLSSLKKLNLSGCLSLICLPNDMANLS 163

Query: 74  SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL +LD+SG  ++   P+ +  + +L  LS   C+           + + ++   + L  
Sbjct: 164 SLIKLDLSGCLSLNSLPNILKNLSSLTKLSLNSCSS----------YDLAILSSLTTLSL 213

Query: 133 LMLPS-------LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
           +   S       L+ L SL +LDLS C L   ++P+++ NL SLK L LS  ++  +LP 
Sbjct: 214 ICCSSLISLPNELANLSSLIRLDLSGC-LSLTSLPNELTNLSSLKRLDLSGCSSLTSLPN 272

Query: 185 SINCLFNLEKLKLEDCKRLQSL 206
            +  L +L +L L  C  L SL
Sbjct: 273 ELKNLSSLRRLTLSCCSSLISL 294


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 27/185 (14%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L++L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQNLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           ++LE LD+ G      P  I  ++NL+ L+  G      +    LP  I           
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAG------NQLTSLPKEI----------- 105

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
                   L +L +LDL   G    ++P +IG L +L+ L L+ N   +LP  I  L NL
Sbjct: 106 ------GQLQNLERLDLD--GNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNL 157

Query: 193 EKLKL 197
           E+L L
Sbjct: 158 ERLDL 162



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 36/245 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G +    LP  I  L++L+ LNL G  
Sbjct: 39  LQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQ-FTSLPKEIGQLQNLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  +L + +GQ+++LE LD+ G      P  I  ++NL+ L+  G      +    LP  
Sbjct: 97  QLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAG------NQLTSLPKE 150

Query: 121 INLMRRSS--DLGALMLPSL-SGLGSLTKLD------------------------LSDCG 153
           I  ++     DL      SL   +G L KL+                        L   G
Sbjct: 151 IGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSG 210

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
                +P +I  L +L++L+L  N   +LP  I  L NL +L L+D K L++LP+    +
Sbjct: 211 DQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNK-LKTLPKEIGQL 269

Query: 214 EKVRV 218
           +K+ V
Sbjct: 270 QKLEV 274



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L    +  +P  I  L  L +L L G +    LP  I  L++L+ LNL G  
Sbjct: 85  LQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQ-FTSLPKEIGQLQNLRVLNLAGN- 142

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 143 QLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 202

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 203 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLT--SLPKEIGQLQNLFELNLQDNKLK 260

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L  LE L+L       K  Q + +L PN E
Sbjct: 261 TLPKEIGQLQKLEVLRLYSNSFSLKEKQKIQELLPNCE 298



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 31/181 (17%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           +G  + E+L   +G  ++LE+L++ G  +   P  I  ++NL+ L+  G        + +
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--------NQF 52

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              P        ++G L         +L +LDL   G    ++P +IG L +L+ L L+ 
Sbjct: 53  TSLP-------KEIGQLQ--------NLERLDLD--GNQFTSLPKEIGQLQNLRVLNLAG 95

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGAL 231
           N   +LP  I  L NLE+L L D  +  SLP+    ++ +RV     N   SL   +G L
Sbjct: 96  NQLTSLPKEIGQLQNLERLDL-DGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQL 154

Query: 232 K 232
           +
Sbjct: 155 Q 155


>gi|418676290|ref|ZP_13237574.1| leucine rich repeat protein [Leptospira kirschneri serovar
            Grippotyphosa str. RM52]
 gi|400323436|gb|EJO71286.1| leucine rich repeat protein [Leptospira kirschneri serovar
            Grippotyphosa str. RM52]
          Length = 1619

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 17/216 (7%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ CK L  +P +I +LK L  L+ L   K   L 
Sbjct: 1229 LNLSGTKFERFPISVTKFQNLTSLSLRDCK-LSEIPESIGNLKRLIDLH-LSSNKLTTLP 1286

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
              +G +E L EL +   +    P ++  +KNLK LS R       +    LP  I  +  
Sbjct: 1287 AGLGTLEQLVELYLDTNSFTTIPDAVLSLKNLKNLSVRW------NQISTLPNEIENLTS 1340

Query: 127  SSDLG--ALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              DL   A  L SL      L SLT++ LS     E   P  I  L +LK L + +N   
Sbjct: 1341 LEDLNLHANQLSSLPTTIQNLSSLTRIGLSKNQFSE--FPEPILYLKNLKYLNIEENRIP 1398

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
             LP +I  L NL+ L + +   ++SLPQ   N+ ++
Sbjct: 1399 KLPETIRNLSNLKSLNISE-TWIESLPQSIENLTQL 1433



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 76/297 (25%), Positives = 122/297 (41%), Gaps = 65/297 (21%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLK-------SLKTLNLL-GCFKFE 63
            T I+E+    +  + L +LT+ G      L S + +LK       +LK LN+L  C   E
Sbjct: 1145 TSIQEL----KFFTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNVLNSCINLE 1200

Query: 64   NL--------------LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP 109
             +               E + + ++   L++SGT     P S+   +NL +LS R C   
Sbjct: 1201 KVELRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTKFQNLTSLSLRDC--- 1257

Query: 110  PSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSL 169
                            + S++      S+  L  L  L LS   L    +P+ +G L  L
Sbjct: 1258 ----------------KLSEIPE----SIGNLKRLIDLHLSSNKL--TTLPAGLGTLEQL 1295

Query: 170  KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-L 228
              LYL  N+F T+P ++  L NL+ L +    R   +  LP  +E +      SL  L L
Sbjct: 1296 VELYLDTNSFTTIPDAVLSLKNLKNLSV----RWNQISTLPNEIENL-----TSLEDLNL 1346

Query: 229  GALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
             A +L     TI     +L  L + GL+ +   EF E +    +   + +  + IPK
Sbjct: 1347 HANQLSSLPTTI----QNLSSLTRIGLSKNQFSEFPEPILYLKNLKYLNIEENRIPK 1399



 Score = 40.0 bits (92), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L +L L    +  +P +I+ LS L ++ L         P  I  LK+LK LN+    
Sbjct: 1338 LTSLEDLNLHANQLSSLPTTIQNLSSLTRIGLSK-NQFSEFPEPILYLKNLKYLNIEEN- 1395

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
            +   L ET+  + +L+ L+IS T I   P SI  +  L+T+
Sbjct: 1396 RIPKLPETIRNLSNLKSLNISETWIESLPQSIENLTQLETI 1436


>gi|168041264|ref|XP_001773112.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675659|gb|EDQ62152.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 333

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 28/221 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  ++ L+ L  L +  C +L  LP+ + +L SL TLN+ GCF+  ++   +G 
Sbjct: 133 SSLTSLPNELDNLTSLTTLNISWCSSLTSLPNELGNLTSLTTLNMWGCFRLTSMPNELGN 192

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  L++ G + +   P+ +  + +L TL+  GC       S  +  P       ++L
Sbjct: 193 LTSLTSLNMKGCSRLTSLPNELGNLTSLTTLNMEGC-------SSLISLP-------NEL 238

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
           G         L SLT L++S C     ++P+++GNL SL  L +S  ++  +LP  +  L
Sbjct: 239 G--------NLTSLTTLNISWCS-SLRSLPNELGNLTSLTILNISWCSSLTSLPNELGNL 289

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
            +L  L  E C  L SLP    N+     + + GC+SL +L
Sbjct: 290 TSLFFLNTEGCSSLTSLPNELDNLTSLIILNMEGCSSLTSL 330



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 21/311 (6%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P SI  L  L  L ++ C++L  LP+ + +L SL  LN+ GC    +L   +G + 
Sbjct: 15  LKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMKGCSSLTSLPNELGNLT 74

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSSD 129
           SL  L++ G +++   P+ +  + +L TL+  GC+     P+            M   S 
Sbjct: 75  SLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFGNLTSLTTLNMTGCSS 134

Query: 130 LGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLPASIN 187
           L +  LP+ L  L SLT L++S C     ++P+++GNL SL TL +       ++P  + 
Sbjct: 135 LTS--LPNELDNLTSLTTLNISWCS-SLTSLPNELGNLTSLTTLNMWGCFRLTSMPNELG 191

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTLLGALKLRKSSCTI-IDF 243
            L +L  L ++ C RL SLP    N+     + + GC+SL++L   L    S  T+ I +
Sbjct: 192 NLTSLTSLNMKGCSRLTSLPNELGNLTSLTTLNMEGCSSLISLPNELGNLTSLTTLNISW 251

Query: 244 VDSLKLLGK---NGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTR 300
             SL+ L     N  ++++L      +S  S   S+      +   F    EG S   + 
Sbjct: 252 CSSLRSLPNELGNLTSLTILN-----ISWCSSLTSLPNELGNLTSLFFLNTEGCSSLTSL 306

Query: 301 PSYLCNMNQVV 311
           P+ L N+  ++
Sbjct: 307 PNELDNLTSLI 317



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 18/228 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L+ L  L +KGC +L  LP+ + +L SL TLN  GC +  +L    G 
Sbjct: 61  SSLTSLPNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFGN 120

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  L+++G +++   P+ +  + +L TL+   C     S+   LP  +  +   + L
Sbjct: 121 LTSLTTLNMTGCSSLTSLPNELDNLTSLTTLNISWC-----SSLTSLPNELGNLTSLTTL 175

Query: 131 ---GALMLPS----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
              G   L S    L  L SLT L++  C     ++P+++GNL SL TL +   ++ ++L
Sbjct: 176 NMWGCFRLTSMPNELGNLTSLTSLNMKGCS-RLTSLPNELGNLTSLTTLNMEGCSSLISL 234

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
           P  +  L +L  L +  C  L+SLP    N+     + ++ C+SL +L
Sbjct: 235 PNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWCSSLTSL 282


>gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana]
          Length = 1217

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 109/235 (46%), Gaps = 28/235 (11%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           E+P SIE L+ L  L L+ C +LV LPS  N+ K L+ L+L  C     L  ++    +L
Sbjct: 745 ELPSSIEKLTSLQILDLQSCSSLVELPSFGNATK-LEILDLDYCSSLVKLPPSIN-ANNL 802

Query: 76  EELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
           +EL +   +     P SI    NLK L+ +GC     S+   LP                
Sbjct: 803 QELSLRNCSRLIELPLSIGTATNLKKLNMKGC-----SSLVKLP---------------- 841

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
             S+  +  L  LDLS+C      +PS IGNL  L  L +   +   TLP +IN L  L 
Sbjct: 842 -SSIGDITDLEVLDLSNCS-NLVELPSSIGNLQKLIVLTMHGCSKLETLPININ-LKALS 898

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
            L L DC RL+  P++  N++ + + G A     L  +   + +   I + +SLK
Sbjct: 899 TLYLTDCSRLKRFPEISTNIKYLWLTGTAIKEVPLSIMSWSRLAEFRISYFESLK 953



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 36/238 (15%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
            ++P SI   + L +L+L+ C  L+ LP +I +  +LK LN+ GC     L  ++G +  L
Sbjct: 792  KLPPSINA-NNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGCSSLVKLPSSIGDITDL 850

Query: 76   EELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
            E LD+S  + +   PSSI  ++ L  L+  GC+   +     LP  INL      L  L 
Sbjct: 851  EVLDLSNCSNLVELPSSIGNLQKLIVLTMHGCSKLET-----LPININL----KALSTLY 901

Query: 135  LPSLSGLGSLTKLD-----LSDCGLGEGAIPSDIGNLHSLKTLYLS-------------- 175
            L   S L    ++      L   G     +P  I +   L    +S              
Sbjct: 902  LTDCSRLKRFPEISTNIKYLWLTGTAIKEVPLSIMSWSRLAEFRISYFESLKEFPHAFDI 961

Query: 176  ------KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
                    +   +P  +  +  L  L L +C  L SLPQL  +++ +  + C SL  L
Sbjct: 962  ITKLQLSKDIQEVPPWVKRMSRLRVLSLNNCNNLVSLPQLSDSLDYIHADNCKSLEKL 1019



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 29/120 (24%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK------------------ 176
           LP+LS   +L +L LS+C      +PS I  L SL+ L L                    
Sbjct: 723 LPNLSTATNLEELKLSNCS-SLVELPSSIEKLTSLQILDLQSCSSLVELPSFGNATKLEI 781

Query: 177 ------NNFVTLPASINCLFNLEKLKLEDCKRLQSLP---QLPPNVEKVRVNGCASLVTL 227
                 ++ V LP SIN   NL++L L +C RL  LP       N++K+ + GC+SLV L
Sbjct: 782 LDLDYCSSLVKLPPSINA-NNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGCSSLVKL 840


>gi|359685166|ref|ZP_09255167.1| molybdate metabolism regulator [Leptospira santarosai str.
            2000030832]
          Length = 1610

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 32/205 (15%)

Query: 6    ELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
            +L LD    +  P++I   S +  L+L+ C N   +P +I +LK L  LNL      + L
Sbjct: 1215 KLNLDAIKFERFPVAITTFSSITYLSLRDC-NFTEIPESIGNLKRLTRLNL-NQNALKTL 1272

Query: 66   LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              ++G +E L  LDI        P ++  +KNL+ LS R                     
Sbjct: 1273 PASIGGLEQLTHLDIDSNQFAIFPDAVLSLKNLEMLSVRSNQ------------------ 1314

Query: 126  RSSDLGALMLPSLS-GLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                     +PSLS G+G+L  L   D  G     +PS I NL SL TLYLS N F   P
Sbjct: 1315 ---------IPSLSEGIGTLASLKNFDLQGNQLSFLPSSIENLSSLDTLYLSGNKFSEFP 1365

Query: 184  ASINCLFNLEKLKLEDCKRLQSLPQ 208
              +  L NL  L   +   + SLP+
Sbjct: 1366 EPVLHLKNLTDLSFNENP-ISSLPE 1389


>gi|297742857|emb|CBI35615.3| unnamed protein product [Vitis vinifera]
          Length = 10107

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 23/178 (12%)

Query: 143  SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
             L +L++SDC L  GAIP D+  L SL+ L +S NN   +P  I  L  L  L +  C  
Sbjct: 9788 QLKELNVSDCNLMAGAIPDDLWCLFSLEVLNVSGNNIDCIPGGIIRLSRLRYLFMSHCLM 9847

Query: 203  LQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLRE 262
            L+ +P+LP ++ ++   GC  L TL        SS        SL          + L+ 
Sbjct: 9848 LKEIPELPSSLRQIEAYGCPLLETL--------SSDAKHPLWSSLH---------NCLKS 9890

Query: 263  FLEVVSAPSH-----KFSIVVPGSE-IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYA 314
             ++    P++        +V+PGS  IP+W  +++ G  I +  P      N  +G+A
Sbjct: 9891 HIQDFECPTYWTKYYHVQVVIPGSRGIPEWISHKSMGDEIKIDLPKNWYEDNNFLGFA 9948


>gi|356547345|ref|XP_003542074.1| PREDICTED: uncharacterized protein LOC100819155 [Glycine max]
          Length = 367

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 20/178 (11%)

Query: 159 IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           IP +I  L SL+ L L   +  ++ ASI  L  LEKL L DC+RL SLP+LP +++++  
Sbjct: 16  IPDNINLLSSLRELLLKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYA 75

Query: 219 NGCASL---------VTLLGALKLRKS--SCTIIDFVDSLKLLGKNGLA--ISMLREFLE 265
             C+SL         V +L A KL  +  +C  +D   SL  +G N       +  +   
Sbjct: 76  INCSSLETVMFTLSAVEMLHAYKLHTTFQNCVKLD-QHSLSAIGVNAYVNIKKVAYDQFS 134

Query: 266 VVSAPSHKF-----SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
            +   S KF       + PGSE+P+WF+Y+   +S+TV   S +   ++++G+  C +
Sbjct: 135 TIGTNSIKFLGGPVDFIYPGSEVPEWFVYRTTQASVTVDLSSSV-PCSKIMGFIFCVI 191


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L       +P  +E L  L +L L G   L  LP+ I  LK+L+ L L    
Sbjct: 91  LKNLRKLNLYDNQFTILPKEVEKLENLKELYL-GSNQLTTLPNEIGQLKNLRVLELTHN- 148

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F+ + + +GQ+++L+ L++    +   P+ I  +KNL++L + G N         LP  
Sbjct: 149 QFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSL-YLGSN-----QLTALPNE 202

Query: 121 INLMR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSK 176
           I  ++  +S  L    L +L + +G L  L     G  +  I P++IG L +L+TLYL  
Sbjct: 203 IGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRY 262

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           N F TLP  I  L NL++L+L +  +L++LP+
Sbjct: 263 NQFTTLPKEIGKLQNLQRLEL-NYNQLKTLPK 293



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 16/207 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L    +  +P  I  L  L  L L G   L  LP+ I  L++L++L  L   
Sbjct: 160 LKNLQTLNLGYNQLTALPNEIGQLKNLQSLYL-GSNQLTALPNEIGQLQNLQSL-YLSTN 217

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L   +GQ+++L+ L +    +   P+ I  +KNL+TL  R       +    LP  
Sbjct: 218 RLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLR------YNQFTTLPKE 271

Query: 121 I----NLMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYL 174
           I    NL R   +   L  LP   G+G L  L   D G  +  I P +IG L +L+ LYL
Sbjct: 272 IGKLQNLQRLELNYNQLKTLPK--GIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYL 329

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCK 201
             N   T+P  I  L NL++L L D +
Sbjct: 330 RDNQLTTIPEEIGQLQNLQELYLRDNQ 356



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 12/198 (6%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +R L L     K +P  I  L  L +L L   + L  LP  I  LK+L+ LNL    +F 
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIGQLKNLRKLNLYDN-QFT 105

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L + V ++E+L+EL +    +   P+ I  +KNL+ L          +    +P  I  
Sbjct: 106 ILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLEL------THNQFKTIPKEIGQ 159

Query: 124 MR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNF 179
           ++  ++ +LG   L +L + +G L  L     G  +  A+P++IG L +L++LYLS N  
Sbjct: 160 LKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRL 219

Query: 180 VTLPASINCLFNLEKLKL 197
            TLP  I  L NL+ L L
Sbjct: 220 TTLPNEIGQLQNLQSLYL 237



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 34/178 (19%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L   +F+ L + +G++++L+EL+++   +   P  I  +KNL+ L+         +    
Sbjct: 53  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLY------DNQFTI 106

Query: 117 LPFPINLMRRSSD--LGALMLPSLSG------------------------LGSLTKLDLS 150
           LP  +  +    +  LG+  L +L                          +G L  L   
Sbjct: 107 LPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTL 166

Query: 151 DCGLGE-GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + G  +  A+P++IG L +L++LYL  N    LP  I  L NL+ L L    RL +LP
Sbjct: 167 NLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYL-STNRLTTLP 223


>gi|168043924|ref|XP_001774433.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674285|gb|EDQ60796.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 119/228 (52%), Gaps = 18/228 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L+ L+ L + GC NL+ LP+ +++L SL +LNL GC    +L   +  
Sbjct: 27  SSLTSLPNELGNLTSLISLDISGCSNLISLPNELHNLASLTSLNLSGCSNLTSLPNELDN 86

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-NLMRRSS- 128
           + SL  LD+SG + +   P+ +  + +L +L+  GC     S+   LP  + NL   +S 
Sbjct: 87  LTSLISLDLSGCSNLTSLPNELDNLTSLTSLNINGC-----SSLTSLPNELGNLTSLTSL 141

Query: 129 ---DLGALM-LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
              +  +L  LP+ L  L SL  LDLS C     ++ +++ NL SL +L LS   +  +L
Sbjct: 142 NINECSSLTSLPNELGNLTSLISLDLSGCS-NLTSLLNELHNLASLTSLNLSGCPSLTSL 200

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           P  +  L +L  L L  C  L SLP    N   +  + +NGC+SL +L
Sbjct: 201 PNELGNLTSLISLDLSGCSNLTSLPNELDNFTSLTSLNINGCSSLTSL 248



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 27/200 (13%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L  L  L L  C NL  LP+ +  L SL  L+L GC    +L   +G 
Sbjct: 315 SSLTSLPNELGHLVSLTSLNLSECSNLTSLPNELGKLTSLILLDLSGCSNLTSLPNELGN 374

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  L+I+G++ +   P+ +  + +L +L    C                 MR +S  
Sbjct: 375 LTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISEC-----------------MRLTS-- 415

Query: 131 GALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINC 188
               LP+ L  L SLT L LS+C     ++P+++GNL SL +L LS+ ++  +LP  +  
Sbjct: 416 ----LPNELGNLKSLTSLILSECS-SLTSLPNELGNLKSLTSLILSECSSLTSLPNELGN 470

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L +L  L L  C+ L SLP 
Sbjct: 471 LTSLTSLNLSGCRHLTSLPN 490



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 35/254 (13%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
            +  +P  +  L+ L+ L L GC NL  LP+ +++  SL +LN+ GC    +L   +G +
Sbjct: 196 SLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFTSLTSLNINGCSSLTSLPNELGNL 255

Query: 73  ESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGC---------NGPPSSASCY-LPFPI 121
            SL  +++S  + +   P+ +  + +L + +   C          G  +S + + L +  
Sbjct: 256 TSLTSINLSWCSNLTSLPNELGNLASLTSFNISECWKLISLPNELGKLTSLTSFNLSWCS 315

Query: 122 NLMRRSSDLGALM---------------LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGN 165
           +L    ++LG L+               LP+ L  L SL  LDLS C     ++P+++GN
Sbjct: 316 SLTSLPNELGHLVSLTSLNLSECSNLTSLPNELGKLTSLILLDLSGCS-NLTSLPNELGN 374

Query: 166 LHSLKTLYLS-KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGC 221
           L SL +L ++  +N  +LP  +  L +L  L + +C RL SLP    N++ +    ++ C
Sbjct: 375 LTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISECMRLTSLPNELGNLKSLTSLILSEC 434

Query: 222 ASLVTL---LGALK 232
           +SL +L   LG LK
Sbjct: 435 SSLTSLPNELGNLK 448



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 18/226 (7%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  L+ +  L L GC +L  LP+ + +L SL +L++ GC    +L   +  + 
Sbjct: 5   LTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELHNLA 64

Query: 74  SLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-- 130
           SL  L++SG + +   P+ +  + +L +L   GC+   S     LP  ++ +   + L  
Sbjct: 65  SLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGCSNLTS-----LPNELDNLTSLTSLNI 119

Query: 131 -GALMLPS----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
            G   L S    L  L SLT L++++C     ++P+++GNL SL +L LS  +N  +L  
Sbjct: 120 NGCSSLTSLPNELGNLTSLTSLNINECS-SLTSLPNELGNLTSLISLDLSGCSNLTSLLN 178

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
            ++ L +L  L L  C  L SLP    N+     + ++GC++L +L
Sbjct: 179 ELHNLASLTSLNLSGCPSLTSLPNELGNLTSLISLDLSGCSNLTSL 224



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 30/203 (14%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA-IRCPPSSIF 93
           C  L  LP  + +L  + +LNL GC    +L   +G + SL  LDISG + +   P+ + 
Sbjct: 2   CSKLTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELH 61

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLDLSDC 152
            + +L +L+  GC+   S                       LP+ L  L SL  LDLS C
Sbjct: 62  NLASLTSLNLSGCSNLTS-----------------------LPNELDNLTSLISLDLSGC 98

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
                ++P+++ NL SL +L ++  ++  +LP  +  L +L  L + +C  L SLP    
Sbjct: 99  S-NLTSLPNELDNLTSLTSLNINGCSSLTSLPNELGNLTSLTSLNINECSSLTSLPNELG 157

Query: 212 NVE---KVRVNGCASLVTLLGAL 231
           N+     + ++GC++L +LL  L
Sbjct: 158 NLTSLISLDLSGCSNLTSLLNEL 180



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 25/198 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +++  +P  +  L+ L+ L L GC NL  LP+ + +L SL +LN+ G     +L   +G 
Sbjct: 339 SNLTSLPNELGKLTSLILLDLSGCSNLTSLPNELGNLTSLTSLNINGSSNLTSLPNELGN 398

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  L IS    +   P+ +  +K+L +L    C     S+   LP         ++L
Sbjct: 399 LTSLTSLHISECMRLTSLPNELGNLKSLTSLILSEC-----SSLTSLP---------NEL 444

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
           G         L SLT L LS+C     ++P+++GNL SL +L LS   +  +LP  +  L
Sbjct: 445 G--------NLKSLTSLILSECS-SLTSLPNELGNLTSLTSLNLSGCRHLTSLPNELGNL 495

Query: 190 FNLEKLKLEDCKRLQSLP 207
            +L  L L  C  L++LP
Sbjct: 496 TSLTSLDLSWCLNLKTLP 513



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ++ L  L+L + + +  +P  +  L  L  L L  C +L  LP+ + +L SL +LNL GC
Sbjct: 423 LKSLTSLILSECSSLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLTSLTSLNLSGC 482

Query: 60  FKFENLLETVGQVESLEELDIS 81
               +L   +G + SL  LD+S
Sbjct: 483 RHLTSLPNELGNLTSLTSLDLS 504


>gi|295083329|gb|ADF78118.1| rj2 protein [Glycine max]
 gi|308171408|gb|ADO15998.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 116/293 (39%), Gaps = 52/293 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ EL 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRELC 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +S ++I       F  +NL  L     +     A   +P  I LM   +++  + L    
Sbjct: 734 LSNSSI---TELSFSFQNLAGLQALDLSFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQ 790

Query: 140 GL--------------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            L                + +L ++ C L +     D      +K L LS+NNF  LP  
Sbjct: 791 WLKQEEGEEKTGSIVSSKVVRLTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPEC 850

Query: 186 IN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
           I  C F L  L + DCK L+ +  +PPN++      C SL +                  
Sbjct: 851 IKECQF-LRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTS------------------ 891

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                        S +R+FL      +      +PG  IP+WF  Q+ G SI+
Sbjct: 892 -------------SSIRKFLNQELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS 931


>gi|15235044|ref|NP_193682.1| Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
 gi|2853074|emb|CAA16924.1| putative protein [Arabidopsis thaliana]
 gi|7268742|emb|CAB78949.1| putative protein [Arabidopsis thaliana]
 gi|332658786|gb|AEE84186.1| Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
          Length = 417

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 29/215 (13%)

Query: 139 SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           S +     + L+DC L +   P +   L SL++L LS+N+   LP SI  L +L+ L L+
Sbjct: 26  SKVQDFRDMYLTDCNLYK--FPDNFSCLSSLQSLCLSRNSIENLPGSIKKLHHLKSLYLK 83

Query: 199 DCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL----RKSSCTIIDFVDSLKL----- 249
           +CK L SLP LP N + + V+GC SL T+   + L     K+  T + F D  KL     
Sbjct: 84  NCKNLISLPVLPSN-QYLDVHGCISLETVSKPMTLLVIAEKTHSTFV-FTDCYKLNRDAQ 141

Query: 250 -------------LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSI 296
                        L      ++   + LE+V  P    S   PG+++P WF +Q  GSS+
Sbjct: 142 EKIVAHTQLKSQILANRSFQLNHKVQSLELVLEPLSAVSF--PGNDLPLWFRHQRIGSSM 199

Query: 297 TVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRF 331
               PS+ C+ ++ +G + C V     +     RF
Sbjct: 200 ETNLPSHWCD-DKFIGLSLCTVVSFKDYEDRTSRF 233


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 32/200 (16%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LP  I  L++L+ L L  C +   L E +GQ++ L  LD+        P  I  ++N
Sbjct: 83  LTVLPKEILQLQNLQMLGL-CCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQLQN 141

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+TL+                        S++L AL    +  L  L KLDL +  L   
Sbjct: 142 LQTLNLD----------------------SNELTALP-KEMRQLQKLQKLDLRENQLT-- 176

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK-- 215
            +P +IG L SL+TLYL  N F TLP  I  L NL+ L L D   L +LP+    ++K  
Sbjct: 177 TLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNL-DSNELTALPKEMRQLQKLQ 235

Query: 216 ---VRVNGCASLVTLLGALK 232
              +R N   +L   +G LK
Sbjct: 236 KLDLRENQLTTLPKEIGQLK 255



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 49/254 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L LD  ++  +P  +  L  L +L L+  + L  LP  I  LKSL+TL LL   
Sbjct: 208 LQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQ-LTTLPKEIGQLKSLQTLYLLANQ 266

Query: 61  ----------------------KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNL 98
                                 +F  L + +GQ+++L+ L + G  +   P  I  ++NL
Sbjct: 267 LTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNL 326

Query: 99  K--TLSFRGCNGPPSSAS---------------CYLPFPINLMR--RSSDLGALMLPS-- 137
           +   LS+      P                     LP  +  +R  ++ DL A+ + +  
Sbjct: 327 QILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFP 386

Query: 138 --LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
             +  L +L KL+ S   L    +P +IG + +LK L L KN    LP  I  L NLE+L
Sbjct: 387 KEILQLQNLEKLNWSRTQLT--TLPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEEL 444

Query: 196 KLE-DCKRLQSLPQ 208
            L  +  +  SLP+
Sbjct: 445 NLNSNSNQFSSLPK 458



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 27/197 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L LD  ++  +P  +  L  L +L L+  + L  LP  I  LKSL+TL  L   
Sbjct: 139 LQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQ-LTTLPKEIGQLKSLQTL-YLRAN 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + + Q+++L+ L++    +   P  +  ++ L+ L  R       +    LP  
Sbjct: 197 QFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLR------ENQLTTLPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L SL  L L    L    +P +IG L +L+ LYL +N F 
Sbjct: 251 I-----------------GQLKSLQTLYLLANQLT--ILPEEIGKLRNLQKLYLCENRFT 291

Query: 181 TLPASINCLFNLEKLKL 197
           TLP  I  L NL+ L L
Sbjct: 292 TLPKDIGQLQNLQSLYL 308



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 9/164 (5%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L +LP  +  L++LKTL+L    +     + + Q+++LE+L+ S T +   P  I  M+N
Sbjct: 359 LTKLPKELGKLRNLKTLDL-HAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQN 417

Query: 98  LKTLSFRG---CNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCG 153
           LK L+         P           +NL   S+   +L  P   G L +L  L L    
Sbjct: 418 LKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSL--PKEIGQLSNLKNLHLDHNM 475

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           L    +P +IG L  L+TL L +N+  TLP  I  L+NL +L L
Sbjct: 476 LAN--LPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDL 517



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 13/166 (7%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA--IRCPPSSIFLM 95
           L  LP  I  +++LK LNL    +   L + +G++++LEEL+++  +      P  I  +
Sbjct: 405 LTTLPGEIGQMQNLKELNL-EKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQL 463

Query: 96  KNLKTLSFRG---CNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSD 151
            NLK L        N P           + L R S +     LP   G L +L +LDLS 
Sbjct: 464 SNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLE----TLPEEIGQLWNLRELDLSY 519

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
             L   +IP +IG L +L+ L+L K     LP  I  L +LE+L L
Sbjct: 520 NPLS--SIPKEIGQLKNLRILHLRKTPLARLPDEIGELQDLEELIL 563



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 23/129 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN-LVRLPSNINSLKSLKTLNL--- 56
           M+ L+EL L+K  +  +P  I  L  L +L L    N    LP  I  L +LK L+L   
Sbjct: 415 MQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHN 474

Query: 57  -----------------LGCFK--FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                            L  F+   E L E +GQ+ +L ELD+S   +   P  I  +KN
Sbjct: 475 MLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKN 534

Query: 98  LKTLSFRGC 106
           L+ L  R  
Sbjct: 535 LRILHLRKT 543


>gi|302822956|ref|XP_002993133.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
 gi|300139024|gb|EFJ05773.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
          Length = 245

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L    I ++P SI  LS L  L L+    L  LP  I  L SLK LN+      E
Sbjct: 19  LRVLELSGNRIVKLPDSIGELSQLTVLDLQS-NQLTALPDTIGRLTSLKRLNIEKN-GIE 76

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFR-GCNGPPSSASCYLPFPIN 122
            L  T+G  ESLEEL      ++  P ++  + NL+ LS    C     S   YL     
Sbjct: 77  ELPWTIGNCESLEELRADFNQLKALPEAVGYLGNLRILSVHLNCLKSLPSTMAYLTSLAE 136

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           L    + L ++   SL  + +L KLD+S        +P  IGNLH L+ L +S N+ + L
Sbjct: 137 LDVHFNQLESVP-ESLCFVTTLRKLDISSNFHALRFLPYKIGNLHQLEELDISYNSILEL 195

Query: 183 PASINCLFNLEKLKLE 198
           P S   L NL KL+LE
Sbjct: 196 PDSFVQLENLRKLRLE 211


>gi|242047716|ref|XP_002461604.1| hypothetical protein SORBIDRAFT_02g005280 [Sorghum bicolor]
 gi|241924981|gb|EER98125.1| hypothetical protein SORBIDRAFT_02g005280 [Sorghum bicolor]
          Length = 1152

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 92/202 (45%), Gaps = 14/202 (6%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           I E+P  I  L  L  L +   K + RLP+ I  LK LKTLN+        L   +G ++
Sbjct: 653 ITEIPTEIARLQYLETLEMTSTK-IKRLPAEIAGLKQLKTLNMSSNIGLAELPREMGSLQ 711

Query: 74  SLEELDISGTAIRCPPSSIF-LMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
            LE L I G+ IR     I   +K LKTL       P  S    +P  I  +++  +L  
Sbjct: 712 HLETLLIRGSNIREQAWEIIGTLKKLKTLD--ASQNPELSG---IPRDIGELQQLKNLNV 766

Query: 133 LM-----LPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                  LP   G L  L  LD+SD  LG   +P +IG L  L+TL LS      +P  I
Sbjct: 767 TSTRITELPKEIGKLQMLKNLDVSD-NLGITELPKEIGKLLHLETLNLSSTRIKEVPREI 825

Query: 187 NCLFNLEKLKLEDCKRLQSLPQ 208
             L +L+ L L   + +  LP+
Sbjct: 826 GNLQHLQALYLNSVRTITKLPR 847


>gi|168012613|ref|XP_001758996.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689695|gb|EDQ76065.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 666

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +++  +P  +  L+ L+   + GC NL  LP+ + +L SL TLN+  C K  +L   +G 
Sbjct: 325 SNLTSIPNELGNLTSLITFDISGCSNLTSLPNELGNLTSLTTLNMGNCSKLTSLPNELGD 384

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-NLMRRSS- 128
           + SL  L+IS  +++   P     + +L TL    C+   S     LP  + NL+  ++ 
Sbjct: 385 LTSLTTLNISKCSSLVSLPKEFGNLTSLTTLDICECSSLTS-----LPKELENLISLTTF 439

Query: 129 DL-GALMLPS----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
           D+ G L L S    LS L SLT  D+S C     +IP+++GNL SL T  +S  +N  +L
Sbjct: 440 DISGCLNLTSLPNELSNLTSLTTFDISVCS-NLTSIPNELGNLTSLITFDISGCSNLTSL 498

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTLLGALKLRKSSCT 239
              +  L +L  L + +C +L SLP    ++     + ++ C+SLV+L   L    +S T
Sbjct: 499 SNELGNLTSLTTLNMGNCSKLTSLPNELSDLSSLTTLNLSKCSSLVSLPKKLD-NLTSLT 557

Query: 240 IIDFVDS 246
           I+D  +S
Sbjct: 558 ILDICES 564



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 26/220 (11%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           ++ L  L LK C  L  LP++I +L +L+ LN+ GC    +L   +G + SL  LDISG 
Sbjct: 1   MTSLKILNLKECSRLRLLPTSIKNLLALRKLNIRGCSSLTSLPNELGNLTSLTILDISGC 60

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL----------MRRSSDLGA 132
           + +   P+ ++ + +L  L+ R C       S  +  P  L          + R S+L +
Sbjct: 61  SKLTSLPNELYNLSSLTILNIRNC-------SSLISLPKELGNLTSLTTLDISRCSNLTS 113

Query: 133 LMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
             LP+ L  L SLT L++S C      +P+++ NL SL  L +   ++  +LP  ++ L 
Sbjct: 114 --LPNELCNLISLTILNISWCS-RLTLLPNELDNLISLTILIIGGYSSMTSLPNELDDLK 170

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
           +L  L +  C  L SLP    N+  +    ++GC+ L++L
Sbjct: 171 SLTTLYMWWCSSLTSLPNKLRNLTSLTTFDISGCSKLISL 210



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 28/208 (13%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-T 83
           + L  L +  C +L+ LP  + +  SL T ++ GC    +L   +  + SL   DIS  +
Sbjct: 266 TTLTTLDICECSSLISLPKELGNFISLTTFDISGCLNLISLPNELSNLTSLTTFDISVFS 325

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
            +   P+ +  + +L T    GC+              NL    ++LG         L S
Sbjct: 326 NLTSIPNELGNLTSLITFDISGCS--------------NLTSLPNELG--------NLTS 363

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKR 202
           LT L++ +C     ++P+++G+L SL TL +SK ++ V+LP     L +L  L + +C  
Sbjct: 364 LTTLNMGNCS-KLTSLPNELGDLTSLTTLNISKCSSLVSLPKEFGNLTSLTTLDICECSS 422

Query: 203 LQSLPQLPPNVEKVR---VNGCASLVTL 227
           L SLP+   N+  +    ++GC +L +L
Sbjct: 423 LTSLPKELENLISLTTFDISGCLNLTSL 450



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 21/245 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +E L  L    + GC NL  LP+ +++L SL T ++  C    ++   +G 
Sbjct: 421 SSLTSLPKELENLISLTTFDISGCLNLTSLPNELSNLTSLTTFDISVCSNLTSIPNELGN 480

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRR 126
           + SL   DISG + +    + +  + +L TL+   C+     P   +       +NL + 
Sbjct: 481 LTSLITFDISGCSNLTSLSNELGNLTSLTTLNMGNCSKLTSLPNELSDLSSLTTLNLSKC 540

Query: 127 SSDLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNFVTLPA 184
           SS    + LP  L  L SLT LD+ +      ++  ++GNL SL  L + ++   ++L  
Sbjct: 541 SS---LVSLPKKLDNLTSLTILDICESS-SLTSLSKELGNLTSLTILNMENRLRLISLSN 596

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV---RVNGCASLVTL---LGALK----LR 234
            I  L +L  L + +C  L  LP+   N+  +    ++GC+SL++L   LG LK    L 
Sbjct: 597 EIGNLISLTTLDICECSSLTLLPKELGNLTSLTTLNISGCSSLISLPNELGNLKSLTTLN 656

Query: 235 KSSCT 239
           KS C+
Sbjct: 657 KSKCS 661



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 18/214 (8%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA- 84
            L    + GC NL+ LP+ +++L SL T ++       ++   +G + SL   DISG + 
Sbjct: 291 SLTTFDISGCLNLISLPNELSNLTSLTTFDISVFSNLTSIPNELGNLTSLITFDISGCSN 350

Query: 85  IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSL------ 138
           +   P+ +  + +L TL+   C+   S     LP  +  +   + L      SL      
Sbjct: 351 LTSLPNELGNLTSLTTLNMGNCSKLTS-----LPNELGDLTSLTTLNISKCSSLVSLPKE 405

Query: 139 -SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLPASINCLFNLEKLK 196
              L SLT LD+ +C     ++P ++ NL SL T  +S   N  +LP  ++ L +L    
Sbjct: 406 FGNLTSLTTLDICECS-SLTSLPKELENLISLTTFDISGCLNLTSLPNELSNLTSLTTFD 464

Query: 197 LEDCKRLQSLPQLPPNVEKV---RVNGCASLVTL 227
           +  C  L S+P    N+  +    ++GC++L +L
Sbjct: 465 ISVCSNLTSIPNELGNLTSLITFDISGCSNLTSL 498


>gi|27764546|gb|AAO23076.1| R 1 protein [Glycine max]
          Length = 902

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 12/216 (5%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L+ L +L+  GC+ L   P    +L SL+TL L GC   E   E +G++E+++ LD
Sbjct: 670 SIGFLNKLKKLSAYGCRKLRSFPPL--NLTSLETLQLSGCSSLEYFPEILGEMENIKALD 727

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR---------RSSDL 130
           + G  I+  P S   +  L  L+   C       S  +   +++ R           S+ 
Sbjct: 728 LDGLPIKELPFSFQNLIGLCRLTLNSCGIIQLPCSLAMMPELSVFRIENCNRWHWVESEE 787

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
           G   + S+     L  + + +C L +    +       ++ L LS NNF  LP     L 
Sbjct: 788 GEEKVGSMISSKELWFIAM-NCNLCDDFFLTGSKRFTRVEYLDLSGNNFTILPEFFKELQ 846

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
            L  L + DC+ LQ +  LPPN+E      CASL +
Sbjct: 847 FLRALMVSDCEHLQEIRGLPPNLEYFDARNCASLTS 882



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME ++ L LD   IKE+P S + L GL +LTL  C  +++LP ++  +  L    +  C 
Sbjct: 720 MENIKALDLDGLPIKELPFSFQNLIGLCRLTLNSC-GIIQLPCSLAMMPELSVFRIENCN 778

Query: 61  KF-----ENLLETVGQVESLEEL 78
           ++     E   E VG + S +EL
Sbjct: 779 RWHWVESEEGEEKVGSMISSKEL 801


>gi|297811955|ref|XP_002873861.1| hypothetical protein ARALYDRAFT_909794 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319698|gb|EFH50120.1| hypothetical protein ARALYDRAFT_909794 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 307

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 13/156 (8%)

Query: 168 SLKTLYLSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
           S++ L LSKN  ++ LP  IN    L+ L L+ CK L  +PQLPPN++ + V+GC SL T
Sbjct: 4   SVRRLCLSKNEKISHLPDLINKFSQLQWLDLKYCKNLTHVPQLPPNLQCLNVHGCCSLKT 63

Query: 227 ----LLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE 282
               L+ ++ ++  S T I           N L  +   E +     P   F    PG E
Sbjct: 64  VAKPLVCSIPMKHISSTFI-------FTNCNELEQAAKEEIVAYSCVPEILFCTSFPGCE 116

Query: 283 IPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRV 318
           +P WF +   GS +    P +  N N++ G A C V
Sbjct: 117 MPSWFSHDAIGSMVEFELPPHW-NHNRLSGIALCVV 151


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 31/240 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L LD   +K++P S+  L  L +L + G   L  +P  I  LKS++TLNL    
Sbjct: 556 LKSMKILNLDNNKMKKIPASLCALQQLTELYMNG-NALTSIPDEIGKLKSMETLNL-SFN 613

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS-CYLPF 119
           K E + +++  +E L EL++   A+   P  I  +K++KTL+          AS C L  
Sbjct: 614 KIEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQ 673

Query: 120 PINLMRRSSDLGAL---------------------MLP-SLSGLGSLTKLDLSDCGLGEG 157
              L+ RS+ L A+                      +P SL  L  LT+LD+    L   
Sbjct: 674 LTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALT-- 731

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           +IP +IG L S+K L L  N    +P S+  L  L  L +E      +L  +P  + K++
Sbjct: 732 SIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEH----NALTAIPDEIGKLK 787



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)

Query: 2   EC--LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           EC  L++L L    I ++P S+  L  L +L ++    L  +P  I  LKS+KTLNL   
Sbjct: 227 ECHELQKLDLSFNKISKIPESLYALEQLTELNMRS-NALTSVPDEIGKLKSMKTLNL-SS 284

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL--SFRGCNGPPSSASCYL 117
            K E +  ++  +E L EL++   A+   P  I  +K+++TL  SF   +  P S     
Sbjct: 285 NKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDS----- 339

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
                               L  L  LT+L ++D  L   ++P +IG L S+KTL LS N
Sbjct: 340 --------------------LCALEKLTELYMNDNALT--SVPDEIGKLKSMKTLNLSSN 377

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
               +PAS+  L  L +L +    +  +L  +P  + K++
Sbjct: 378 KIEKIPASLCTLEQLTELDM----KYNALTAIPDEISKLK 413



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 31/240 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L LD   +K++P S+  L  L +L + G   L  +P  I+ LKS+K LNL    
Sbjct: 464 LKSMKILNLDNNKMKKIPASLCALQQLTELYMNG-NALTSIPDEISKLKSMKILNLY-FN 521

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS-CYLPF 119
           K + + +++  +E L EL+++  A+   P  I  +K++K L+          AS C L  
Sbjct: 522 KIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQ 581

Query: 120 PINLMRRSSDLGAL---------------------MLP-SLSGLGSLTKLDLSDCGLGEG 157
              L    + L ++                      +P SL  L  LT+L++    L   
Sbjct: 582 LTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSNALT-- 639

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           ++P +IG L S+KTL LS N    +PAS+  L  L +L +    R  +L  +P  + K++
Sbjct: 640 SVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIM----RSNALTAIPDEISKLK 695



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 33/244 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L L    I+++P S+  L  L +L + G   L  +P  I  LKS++TL+L    
Sbjct: 274 LKSMKTLNLSSNKIEKIPASLCALEKLTELNM-GSNALTSIPDEIGKLKSMETLDL-SFN 331

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS-CYLPF 119
           K + + +++  +E L EL ++  A+   P  I  +K++KTL+          AS C L  
Sbjct: 332 KIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLEQ 391

Query: 120 PINLMRRSSDLGAL---------------------MLP-SLSGLGSLTKLDLSD----CG 153
              L  + + L A+                      +P SL  L  LT+LD++D      
Sbjct: 392 LTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDXXXMAS 451

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
               +IP +I  L S+K L L  N    +PAS+  L  L +L +       +L  +P  +
Sbjct: 452 NALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNG----NALTSIPDEI 507

Query: 214 EKVR 217
            K++
Sbjct: 508 SKLK 511



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 18/155 (11%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR-- 126
           +G+   L++LD+S   I   P S++ ++ L  L+ R      S+A   +P  I  ++   
Sbjct: 225 IGECHELQKLDLSFNKISKIPESLYALEQLTELNMR------SNALTSVPDEIGKLKSMK 278

Query: 127 ----SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
               SS+    +  SL  L  LT+L++    L   +IP +IG L S++TL LS N    +
Sbjct: 279 TLNLSSNKIEKIPASLCALEKLTELNMGSNAL--TSIPDEIGKLKSMETLDLSFNKIDKI 336

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           P S+  L  L +L + D     +L  +P  + K++
Sbjct: 337 PDSLCALEKLTELYMND----NALTSVPDEIGKLK 367



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 37/223 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ ++ L L    I+++P S+  L  L +L +K    L  +P  I+ LKS+  LNL    
Sbjct: 366 LKSMKTLNLSSNKIEKIPASLCTLEQLTELDMK-YNALTAIPDEISKLKSMNILNL-DNN 423

Query: 61  KFENLLETVGQVESLEELDI------SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSAS 114
           K E + +++  ++ L ELD+      +  A+   P  I  +K++K L+            
Sbjct: 424 KMEKIPDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDN--------- 474

Query: 115 CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                  N M++       +  SL  L  LT+L ++   L   +IP +I  L S+K L L
Sbjct: 475 -------NKMKK-------IPASLCALQQLTELYMNGNALT--SIPDEISKLKSMKILNL 518

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             N    +P S+  L  L +L +       +L  +P  + K++
Sbjct: 519 YFNKIDKIPDSLCALEKLTELNMAS----NALTSIPDEISKLK 557


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 19/220 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ +++L+L+  + K++P SI  ++ L  L+ K C+NL  LPS ++ LK+LK L L  C+
Sbjct: 462 LQKMKKLILNCGNFKQLPESICQIASLRILSCKSCRNLSSLPSGLSILKNLKVLVLNKCY 521

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L   VG ++SL  L +    +   PSS   + NL+ L         S+    LP  
Sbjct: 522 SLLGLGRNVGDIKSLRVLRVRNIRLTELPSSFENLTNLRVLDL------ASNELSVLPDS 575

Query: 121 INLMRRSSDL-GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNN 178
           +  +  S D+    ++   SGL SL  L+L    +   +I  ++GNL SL+ L L    N
Sbjct: 576 LGNVVYSRDIKNNNVIECKSGLVSLRTLNLYHNPI--VSIADNVGNLESLEALNLIGWGN 633

Query: 179 FVTLPASINCLFNLEKLKL---------EDCKRLQSLPQL 209
             +LP +   L NL+KL +         ED  +LQSL QL
Sbjct: 634 LTSLPDTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQL 673



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 13/215 (6%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF-KFENLLETVGQVESLEEL 78
           S + + GL  L L   + L   PS I +LKSLK L  L  F K E++   + ++ +LE L
Sbjct: 318 SFKKMKGLKVLKLSLNQQLGHFPSQILNLKSLKIL--LASFCKIESIPREISELTNLEVL 375

Query: 79  DISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM--LP 136
            ++G  I   P SI  +  L+ L   G  GP + + C   +  N  ++ SD    +  LP
Sbjct: 376 ILNGNKIPALPKSIKHLAKLRILGL-GRFGPENISDCE-EYSRNESKKISDDRNRIKRLP 433

Query: 137 -SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
            +++ L +L  L+L   G+    +P +IG L  +K L L+  NF  LP SI  + +L  L
Sbjct: 434 DTITELQNLEILNLD--GVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQIASLRIL 491

Query: 196 KLEDCKRLQSLP---QLPPNVEKVRVNGCASLVTL 227
             + C+ L SLP    +  N++ + +N C SL+ L
Sbjct: 492 SCKSCRNLSSLPSGLSILKNLKVLVLNKCYSLLGL 526



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 92/195 (47%), Gaps = 32/195 (16%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           +R L L+K  IK +P SI  L  + +L L    NL+  LP +I  L +LK L++ G    
Sbjct: 88  IRTLNLNKNLIKAIPKSIFNLKSIEKLYLNN--NLIDFLPDSIAELSTLKLLSMQGNQLI 145

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E  L  +  +  L  LD++   I+  P    L   L TL+ R  +     + C       
Sbjct: 146 E--LPDLSGLPDLRHLDVAFNRIKELPR---LSPKLATLTARFNSIAKIDSMCS------ 194

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
                        PSLS    L KLDL   G     IP++IGNL+S++ LYL  NN V +
Sbjct: 195 -------------PSLS---YLKKLDL--LGNQIKTIPAEIGNLNSVEMLYLQFNNIVEV 236

Query: 183 PASINCLFNLEKLKL 197
           P SI  L NL++L L
Sbjct: 237 PRSIFSLKNLKQLHL 251



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 38/217 (17%)

Query: 21  IELLSGLVQL-TLKGCKN-LVRLPSNINSLKSLKTLNLLGC------------------- 59
           IE  SGLV L TL    N +V +  N+ +L+SL+ LNL+G                    
Sbjct: 591 IECKSGLVSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKL 650

Query: 60  ----FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC 115
                  + L E  G+++SLE+L I    +   P S   M NLK L  R      +  + 
Sbjct: 651 DICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRN-----TKVAT 705

Query: 116 YLPFP--INL--MRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
              F   +NL  +R S +     LP +   L +L +L + +  +   A+P +IGNL SL 
Sbjct: 706 LFGFENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKI--TALPENIGNLKSLA 763

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            L++  N    LP S   L +L +L + DC ++  LP
Sbjct: 764 ILWMQNNKINRLPGSFGELESLMEL-VADCNKIPLLP 799



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 13/212 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L+ L +  T +  +    E L  L  L L G KNL  LP N ++L +LK L ++   
Sbjct: 690 MANLKRLEVRNTKVATL-FGFENLVNLEFLRLSGNKNLETLPENFDNLINLKQL-VIQNS 747

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K   L E +G ++SL  L +    I   P S   +++L  L    CN  P     +    
Sbjct: 748 KITALPENIGNLKSLAILWMQNNKINRLPGSFGELESLMEL-VADCNKIPLLPDSFGKLK 806

Query: 121 -INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAI---PSDIGNLHSLKTLYLSK 176
            ++++R +S+     LP     G LT  +LS+C +    +   P   GNL SL+ L+L  
Sbjct: 807 NLSVLRLNSN-QITSLPD--NFGKLT--NLSECMINFNMLTRLPESFGNLKSLRVLWLKA 861

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           N   +LP +   L +LE L L D  RL+ +P+
Sbjct: 862 NRLESLPDNFIDLASLEHLFL-DFNRLKKIPE 892



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 16/172 (9%)

Query: 47  SLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
           SL  LK L+LLG  + + +   +G + S+E L +    I   P SIF +KNLK L     
Sbjct: 196 SLSYLKKLDLLGN-QIKTIPAEIGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHL--- 251

Query: 107 NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNL 166
               S+    LP  +    + S L            +LT LDLS+  + +  IP  I  L
Sbjct: 252 ---GSNKISKLPARLTGKAKKSYLIHFQ-------KNLTVLDLSNNKITQ--IPKYITEL 299

Query: 167 HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            +LK L L  N    L  S   +  L+ LKL   ++L   P    N++ +++
Sbjct: 300 VNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLNQQLGHFPSQILNLKSLKI 351



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 41/228 (17%)

Query: 38   LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
            L RLP +  +LKSL+ L  L   + E+L +    + SLE L +    ++  P  I L+KN
Sbjct: 841  LTRLPESFGNLKSLRVL-WLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPEKIGLLKN 899

Query: 98   LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
            L   S                        + +   ++  S++ L  L +L++++  +   
Sbjct: 900  LTKFSL-----------------------AQNSLKIIPDSVTKLYELEELNMANNAIKR- 935

Query: 158  AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL--EDCKRLQSLPQLPPNVEK 215
             +P  +GNL  L  L L+ N    LP S+  L  L  LK+     +RL        N+++
Sbjct: 936  -LPYCMGNLRKLMELNLNSNKLDNLPDSMKNLERLSILKIHTNQFRRLSDCVYEMTNLKE 994

Query: 216  V--RVNGCASLVTLLGALK-----------LRKSSCTIIDFVDSLKLL 250
            +    N  +++   +  LK           ++K  CTI +  D+L LL
Sbjct: 995  IGASFNSISAIYRDISKLKKLRRLNLYKNNIKKLPCTIAELNDTLVLL 1042


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 119/270 (44%), Gaps = 51/270 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L EL L +     +P S+  L  L +L L    +L +LP NI  LK+L+ LNL    
Sbjct: 82  LQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNL 141

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFL-----------------------MKN 97
             + L E + Q++ L+ L+++G++    P++I L                       + N
Sbjct: 142 SLKKLPENITQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFSQLHN 201

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG-----ALMLP-SLSGLGSLTKLDLSD 151
           LK L+ +      SS    LP  I  ++  + L         LP S+  L SL KLDL  
Sbjct: 202 LKVLNLK------SSGLVALPNNIGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQG 255

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE---------DCKR 202
             L    +P  IG L SLK L L  N   TLP SI  L NL++L LE         D  +
Sbjct: 256 NQL--TILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGK 313

Query: 203 LQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
           L+ L      V  +R N   +L   +G LK
Sbjct: 314 LKQL-----KVLNLRRNRLTTLPNSIGRLK 338



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 49/208 (23%)

Query: 38  LVRLPSNINSLKSLKTLNL----------------------LGCFKFENLLETVGQVESL 75
           L  LP+NI  LK+LK LNL                      L   KF  L  +V ++++L
Sbjct: 49  LTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPASVTKLQNL 108

Query: 76  EELDI-------------------------SGTAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
           EEL++                         S  +++  P +I  +K LK L+  G +   
Sbjct: 109 EELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSRII 168

Query: 111 SSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
             A+  LP  + ++  +  L   +  + S L +L  L+L   GL   A+P++IG L +L 
Sbjct: 169 LPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGL--VALPNNIGQLKNLT 226

Query: 171 TLYLSKNNFVTLPASINCLFNLEKLKLE 198
            L L +N    LP SI  L +LEKL L+
Sbjct: 227 ILNLRENYLTKLPTSIGQLKSLEKLDLQ 254



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 120/285 (42%), Gaps = 62/285 (21%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E LR L ++   +  +P +   L  L  L LK    LV LP+NI  LK+L  LNL   + 
Sbjct: 177 ESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSS-GLVALPNNIGQLKNLTILNLRENY- 234

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASC-- 115
              L  ++GQ++SLE+LD+ G  +   P SI  +K+LK L   G N     P S      
Sbjct: 235 LTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDL-GANQLTTLPTSIGQLKN 293

Query: 116 --YLPFPIN-LMRRSSDLGAL--------------MLP-SLSGLGSLTKLDLSDCGLG-- 155
              L   +N L     D+G L               LP S+  L SL  L LS   L   
Sbjct: 294 LQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRL 353

Query: 156 ---------------EG----AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
                          EG     + + +G L SLK LYL+ NN  TLP +I  L  L+ L 
Sbjct: 354 PKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLT 413

Query: 197 L---------EDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
           L         E   +LQ L  L      +R N  ++L   LG LK
Sbjct: 414 LVRNKLDRLPESIGQLQELQYL-----DLRRNRLSTLPESLGQLK 453



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           L +L KL+L    L    +P+    L +L+ L L++N F TLPAS+  L NLE+L L D 
Sbjct: 59  LKNLKKLNLEYNQLT--TLPASFAKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDN 116

Query: 201 KRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNG 254
               SL +LP N+E+++     +L + L   KL ++    I  +  LK+L  NG
Sbjct: 117 ---LSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPEN----ITQLKKLKVLNLNG 163


>gi|418704583|ref|ZP_13265455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410765799|gb|EKR36494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 267

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 13/200 (6%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L+ L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQKLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD++G      P  I  ++NL+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAG------NQLTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 SL   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L NL+ L L D  +L SLP+
Sbjct: 177 LQNLQSLHL-DGNQLTSLPK 195



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G +    LP  I  L++L+ LNL G  
Sbjct: 39  LQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ-FTTLPKEIGQLQNLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 97  QLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L NL+ L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIGQLQNLQVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L  L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           +L L    +  +LP+    ++ +RV     N   SL   +G L+
Sbjct: 67  RLDLA-GNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQ 109


>gi|295083311|gb|ADF78109.1| Rj2 protein [Glycine max]
          Length = 1052

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 119/295 (40%), Gaps = 56/295 (18%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ +L 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSCCYSLESFPKILGKMENIRQLW 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--INLMRRSSDLGALMLPS 137
           +S ++I   P   F  +NL  L  RG      S       P  I LM   + + AL L  
Sbjct: 734 LSESSITELP---FSFQNLAGL--RGLELLFLSPHTIFKVPSSIVLMPELTVIRALGLKG 788

Query: 138 LSGL---------GSLTK-----LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
              L         GS+       L ++ C L +     D      +K L LS+NNF  LP
Sbjct: 789 WQWLKQEEGEEKTGSIVSSKVEMLTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILP 848

Query: 184 ASIN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
             I  C F L KL + DCK L+ +  +PPN++      C SL +                
Sbjct: 849 ECIKECQF-LRKLDVCDCKHLREIRGIPPNLKHFFAINCKSLTS---------------- 891

Query: 243 FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                          S +R+FL      +      +PG  IP+WF  Q+ G SI+
Sbjct: 892 ---------------SSIRKFLNQELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS 931


>gi|255553891|ref|XP_002517986.1| hypothetical protein RCOM_1176340 [Ricinus communis]
 gi|223542968|gb|EEF44504.1| hypothetical protein RCOM_1176340 [Ricinus communis]
          Length = 453

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 65/97 (67%), Gaps = 1/97 (1%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + ++E+P+SI LL+ L+ L L+GC+NL  LP +I  +K+L+ LN+LGC KFE L E++G 
Sbjct: 254 SQLEELPMSIALLARLIFLNLQGCENLKILPESIGDMKALQELNILGCSKFEELPESIGL 313

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN 107
           +  +  L++     ++  P SI  +K+L+ L+  GC+
Sbjct: 314 LTHIVILNLQDCENLKHLPGSIGDLKSLEKLNMSGCS 350



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 12/188 (6%)

Query: 137 SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL-YLSKNNFVTLPASINCLFNLEKL 195
           S++ L  L  L+L  C      +P  IG++ +L+ L  L  + F  LP SI  L ++  L
Sbjct: 262 SIALLARLIFLNLQGCE-NLKILPESIGDMKALQELNILGCSKFEELPESIGLLTHIVIL 320

Query: 196 KLEDCKRLQSLPQLPPNV---EKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK 252
            L+DC+ L+ LP    ++   EK+ ++GC+ L  L   L L   S  + + V   KL  +
Sbjct: 321 NLQDCENLKHLPGSIGDLKSLEKLNMSGCSKLEELDVTLPLSFLSSQL-NTVSLSKLQNR 379

Query: 253 NGLAISMLREFLEVVSAPSHKF--SIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQV 310
           N    + L  ++ +   P  +   SI VPGSEIP  F +Q+E  +I++     +   ++ 
Sbjct: 380 N----NNLTGYVALRFFPMERVFDSISVPGSEIPDLFSHQSEYDAISLQVTPLVNEGSKS 435

Query: 311 VGYAACRV 318
           +  A C V
Sbjct: 436 MCIATCTV 443



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 16/148 (10%)

Query: 8   LLDKTDIKEMP----LSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L++  D ++ P    L ++   G+ +L L GC  L  LP +I  L  L  LNL GC   +
Sbjct: 222 LMETPDFEDCPSLEKLIVKDWKGITKLNLSGCSQLEELPMSIALLARLIFLNLQGCENLK 281

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            L E++G +++L+EL+I G +     P SI L+ ++  L+ + C         +LP  I 
Sbjct: 282 ILPESIGDMKALQELNILGCSKFEELPESIGLLTHIVILNLQDCENLK-----HLPGSI- 335

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLS 150
                 DL +L   ++SG   L +LD++
Sbjct: 336 -----GDLKSLEKLNMSGCSKLEELDVT 358



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 1   MECLREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           M+ L+EL +L  +  +E+P SI LL+ +V L L+ C+NL  LP +I  LKSL+ LN+ GC
Sbjct: 290 MKALQELNILGCSKFEELPESIGLLTHIVILNLQDCENLKHLPGSIGDLKSLEKLNMSGC 349

Query: 60  FKFENL 65
            K E L
Sbjct: 350 SKLEEL 355


>gi|105922434|gb|ABF81416.1| NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 925

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 54/79 (68%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I+ LKSLK L+L GC 
Sbjct: 553 MNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCS 612

Query: 61  KFENLLETVGQVESLEELD 79
           + +N+ + +G+VESLEE D
Sbjct: 613 ELKNIPKNLGKVESLEEFD 631



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 85/198 (42%), Gaps = 29/198 (14%)

Query: 97  NLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           NL++L   GC       PS  S      +NL+   S     +LPS   + SL    L  C
Sbjct: 484 NLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKS---IRILPSNLEMESLKVFTLDGC 540

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
            L     P  + N++ L  L L +     L +SI  L  L  L +  CK L+S+P     
Sbjct: 541 -LKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIP----- 594

Query: 213 VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
                    +S+  L    KL  S C+       LK + KN   +  L EF + +S P  
Sbjct: 595 ---------SSISCLKSLKKLDLSGCS------ELKNIPKNLGKVESLEEF-DGLSNPRP 638

Query: 273 KFSIVVPGSEIPKWFMYQ 290
            F IVVPG+EIP WF ++
Sbjct: 639 GFGIVVPGNEIPGWFNHR 656



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 68/162 (41%), Gaps = 30/162 (18%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     L  + L  CK++  LPSN+  ++SLK   L GC K E   + V  
Sbjct: 494 TSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNLE-MESLKVFTLDGCLKLEKFPDVVRN 552

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSS 128
           +  L  L +  T I    SSI  +  L  LS   C      PSS SC             
Sbjct: 553 MNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISC------------- 599

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                       L SL KLDLS C   +  IP ++G + SL+
Sbjct: 600 ------------LKSLKKLDLSGCSELKN-IPKNLGKVESLE 628


>gi|417771043|ref|ZP_12418941.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Pomona]
 gi|418682684|ref|ZP_13243898.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Kennewicki LC82-25]
 gi|400325606|gb|EJO77881.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Kennewicki LC82-25]
 gi|409947011|gb|EKN97017.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Pomona]
 gi|455669281|gb|EMF34427.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Fox 32256]
          Length = 1616

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ C NL  +P +I +LK L  L+L    +   L 
Sbjct: 1226 LNLSGTKFERFPISVTRFQNLTSLSLRQC-NLSEVPESIGNLKRLIDLHL-NSNQLTTLP 1283

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L +L I        P ++  +KNLKTL  R       +    LP  I  +  
Sbjct: 1284 ASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARW------NQISTLPNEIGNLTS 1337

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSD------------------CGLGEGAI--- 159
              DL       + +  ++  L SLTK+ LS                     +GE  I   
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK+L + +    +LP SI  L  LE + L   K  + LP    N+E ++
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAK-FRDLPDFLANMESLK 1454



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 16/201 (7%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L +L L+   +  +P S+  L  L QL +        +P  + SLK+LKTL L    +  
Sbjct: 1269 LIDLHLNSNQLTTLPASLGTLEQLTQLHIDS-NPFTTIPDAVLSLKNLKTL-LARWNQIS 1326

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
             L   +G + SLE+L++    +   P++I   +NL +L+  G +    S     P PI  
Sbjct: 1327 TLPNEIGNLTSLEDLNLHDNQLSSLPTTI---QNLSSLTKIGLSKNKFSE---FPEPILY 1380

Query: 124  MR--RSSDLGA---LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
            ++  +  D+G      LP ++  L +L  LD+ +  +   ++P  I NL  L+T+YL K 
Sbjct: 1381 LKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETWIE--SLPQSIQNLTQLETIYLPKA 1438

Query: 178  NFVTLPASINCLFNLEKLKLE 198
             F  LP  +  + +L+K+K E
Sbjct: 1439 KFRDLPDFLANMESLKKIKFE 1459



 Score = 47.4 bits (111), Expect = 0.018,   Method: Composition-based stats.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 36/190 (18%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC-FKFENLLETVG 70
            T I+E+    +  + L +LT+ G    V   S ++ LK+LK + L     K  N+L +  
Sbjct: 1142 TSIQEL----KFFTKLEELTINGP---VTDSSLLSELKNLKKIELDDWNLKDLNVLNSCI 1194

Query: 71   QVESLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
             +E +E  +I G  T   C   S  L ++  T+          S + +  FPI++ R   
Sbjct: 1195 NLEEIELRNIKGFETDFDC---SELLNESKATIHLN------LSGTKFERFPISVTR--- 1242

Query: 129  DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                          +LT L L  C L E  +P  IGNL  L  L+L+ N   TLPAS+  
Sbjct: 1243 ------------FQNLTSLSLRQCNLSE--VPESIGNLKRLIDLHLNSNQLTTLPASLGT 1288

Query: 189  LFNLEKLKLE 198
            L  L +L ++
Sbjct: 1289 LEQLTQLHID 1298


>gi|295083303|gb|ADF78105.1| Rj2 protein [Glycine max]
          Length = 1052

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 122/293 (41%), Gaps = 52/293 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ +L 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRQLC 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +S ++I   P S   +  L+ L  R  +     A   +P  I LM   +++  + L    
Sbjct: 734 LSESSITELPFSFQNLAGLQALELRFLS---PHAIFKVPSSIVLMPELTEIFVVGLKGWQ 790

Query: 140 GL--------------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            L                + +L ++ C L +     D      +K L LS+NNF  LP  
Sbjct: 791 WLKQEEGEEKTGSIVSSKVVRLTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPEC 850

Query: 186 IN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
           I  C F L  L + DCK L+ +  +PPN++      C SL           +S +I  F+
Sbjct: 851 IKECQF-LRILDVCDCKHLREIRGIPPNLKHFFAINCKSL-----------TSSSISKFL 898

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
           +                   E+  A +  F +  PG  IP+WF  Q+ G SI+
Sbjct: 899 NQ------------------ELHEAGNTVFCL--PGKRIPEWFDQQSRGPSIS 931


>gi|359477831|ref|XP_002282906.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 879

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 83/195 (42%), Gaps = 55/195 (28%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPP 89
           LTL+GC NL  LP  I  LK L+TL+  GC K E   E +  +  L  LD+SGTAI   P
Sbjct: 658 LTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLP 717

Query: 90  SSIFLMKNLKTLSFRGCNGPPSSAS--CYLPFPINLMRRSSDLGALMLPSLSGLGSLTKL 147
           SSI  +  L+TL  + C+      S  CY                        L SL KL
Sbjct: 718 SSITHLNGLQTLLLQECSKLHQIPSHICY------------------------LSSLKKL 753

Query: 148 DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           +L      EG                    +F ++P +IN L  L+ L L  C  L+ +P
Sbjct: 754 NL------EGG-------------------HFSSIPPTINQLSRLKALNLSHCNNLEQIP 788

Query: 208 QLPPNVEKVRVNGCA 222
           +LP     V+V  C 
Sbjct: 789 ELPS----VKVARCG 799



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR L L  T I ++P SI  L+GL  L L+ C  L ++PS+I  L SLK LNL G  
Sbjct: 700 MRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEGG- 758

Query: 61  KFENLLETVGQVESLEELDIS 81
            F ++  T+ Q+  L+ L++S
Sbjct: 759 HFSSIPPTINQLSRLKALNLS 779


>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
          Length = 495

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 95/195 (48%), Gaps = 11/195 (5%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  LS L +L L  C     LP +I +L SLK LNL+       L E++G + SLE
Sbjct: 223 LPEEIGSLSKLEELDLSQC-GFTTLPESIGNLTSLKKLNLVSN-NLTTLPESIGNLTSLE 280

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP---PSSASCYLPFPINLMRRSSDLGAL 133
           EL +    +   P SI  +  LKT  F G N     P S          L  R +DL  L
Sbjct: 281 ELYLGKNNLTTLPESIGNLSRLKTF-FSGSNKLSVLPESIGNLTSLE-ELFLRETDLTTL 338

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
              S+  L SL +L L++  L   A+P  IGNL SL+ L L  N   TLP SI  L  L+
Sbjct: 339 P-ESIGNLISLERLYLNESNLT--ALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLD 395

Query: 194 KLKLEDCKRLQSLPQ 208
            L L+  K L +LP+
Sbjct: 396 LLDLQGNK-LTTLPE 409



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 29/190 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L EL L +TD+  +P SI  L  L +L L    NL  LP +I +L SL+ LNL G  
Sbjct: 322 LTSLEELFLRETDLTTLPESIGNLISLERLYLNES-NLTALPQSIGNLTSLEKLNLDGN- 379

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E++G +  L+ LD+ G  +   P SI    NL +L     N   ++A   LP  
Sbjct: 380 RLTTLPESIGNLTRLDLLDLQGNKLTTLPESI---GNLTSLDEFILN---NNALTVLPES 433

Query: 121 I-NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
           I NL++    L AL L      G+    DL+        +P  IG+L +  T+Y+ K+ +
Sbjct: 434 IGNLIK----LSALYL-----FGN----DLT-------TLPESIGSLKNNLTIYMLKSQY 473

Query: 180 VTLPASINCL 189
                SI  +
Sbjct: 474 TRCEKSIKLI 483


>gi|356559294|ref|XP_003547935.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1075

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 117/296 (39%), Gaps = 61/296 (20%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  LS L  L   GC+ L   P    +L SL+TL L  C   EN  E +G++++L  L 
Sbjct: 672 SIGFLSKLKILNATGCRKLTTFPPL--NLTSLETLQLSSCSSLENFPEILGEMKNLTSLK 729

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +    ++  P S   +  LKTLS   C          LP  I +M +   L A     L 
Sbjct: 730 LFDLGLKELPVSFQNLVGLKTLSLGDC------GILLLPSNIVMMPKLDILWAKSCEGLQ 783

Query: 140 GLGSLTK--------------LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            + S  +                ++ C L +    +    L  +KTL L  NNF  LP S
Sbjct: 784 WVKSEEREEKVGSIVCSNVYHFSVNGCNLYDDFFSTGFVQLDHVKTLSLRDNNFTFLPES 843

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL----KLRKSSCTII 241
           I  L  L KL +  C  LQ +  +PPN+++     C SL +   ++    +L ++  T+ 
Sbjct: 844 IKELQFLRKLDVSGCLHLQEIRGVPPNLKEFTAGECISLSSSSLSMLLNQELHEAGETMF 903

Query: 242 DFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
            F                                   PG+ IP+WF +Q+   SI+
Sbjct: 904 QF-----------------------------------PGATIPEWFNHQSREPSIS 924


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L LD     E+P  + LL GLV+L+L G   L  LP     L+ L +L  L    F 
Sbjct: 72  LRRLWLDSNGFGELPPQVALLGGLVELSLTG-NGLTTLPEEFARLERLTSL-WLDENAFT 129

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI-- 121
            L E VG + SL +L +    +   P S+    +L TL   G +         LP  I  
Sbjct: 130 ALPEVVGHLSSLTQLYLQKNQLPGLPDSLG-APSLHTLVLDGNH------LAELPDWIGD 182

Query: 122 --NLMRRSSDLGAL--MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
             +L+  S+D   L  + PS+  L  L +L L+   L +  +P+ IG++ SL  LYL KN
Sbjct: 183 TQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRK--LPTSIGDMASLTKLYLQKN 240

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
              TLPASI  L  L+ L L     L+ LP
Sbjct: 241 QLQTLPASIGNLSELQTLALS-GNHLEELP 269



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+EL L    ++++P SI  ++ L +L L+  + L  LP++I +L  L+TL L G    E
Sbjct: 209 LQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQ-LQTLPASIGNLSELQTLALSGNH-LE 266

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF---RGCNGPPSSASCYLPFP 120
            L  +V  +  L EL+++   +   P +I  + +L  LS    R    PPS  +  +   
Sbjct: 267 ELPASVADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTA 326

Query: 121 INLMRRS-----------SDLGALMLP---------SLSGLGSLTKLDLSDCGLGEGAIP 160
           +++ R S           ++L  L L          S+  L  LT L L+ C L    +P
Sbjct: 327 LDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLE--TLP 384

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           + +G LH L+TL L  NN   LP  ++ L  L  L L
Sbjct: 385 AGLGGLHRLETLDLVGNNLRDLPFQLSGLGALTTLNL 421



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 62/253 (24%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L +L L K  ++ +P SI  LS L  L L G  +L  LP+++  L  L  LNL   +
Sbjct: 229 MASLTKLYLQKNQLQTLPASIGNLSELQTLALSG-NHLEELPASVADLSRLTELNLADNW 287

Query: 61  KFENLLETVGQVESLEEL-----------------------DISGTAIRCPPSSIFLMKN 97
              ++ E +G++ SL++L                       D+S  ++   P S   + N
Sbjct: 288 -LTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLAN 346

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRR--------------SSDLGALM--------- 134
           L TL+      P +S    LP  +  ++R               + LG L          
Sbjct: 347 LDTLNL--AQNPLTS----LPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVG 400

Query: 135 -----LP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                LP  LSGLG+LT L+L+   L    +P  +G L +L  L L+ N   +LP ++  
Sbjct: 401 NNLRDLPFQLSGLGALTTLNLASNQL--SWVPRTLGLLRNLVNLDLADNELSSLPRALGG 458

Query: 189 LFNLEKLKLEDCK 201
           L +L KL + + +
Sbjct: 459 LESLRKLDVAENQ 471


>gi|77696205|gb|ABB00837.1| disease resistance protein [Arabidopsis thaliana]
 gi|77696211|gb|ABB00840.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 52/292 (17%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P  +   + L +L L  C++LV +PS+ + L  L+ L +  C   + +        
Sbjct: 135 LKELP-DLSNATNLARLDLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVI-------- 185

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCYLPFPINLMRRSSD 129
                          P+ + L  +L+T++ RGC    N P  S +      I  +  S  
Sbjct: 186 ---------------PAHMNL-ASLETVNMRGCSRLRNIPVMSTN------ITQLYVSRT 223

Query: 130 LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
               M PS+     L +L +S  G  +G     I    SLK L L  ++  T+P  I  L
Sbjct: 224 AVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPI----SLKQLDLIDSDIETIPECIKSL 279

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
             L  L L  C+RL SLP+LP ++  +  + C SL T+   L   K+    ++F +  K 
Sbjct: 280 HLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLNTPKAE---LNFTNCFK- 335

Query: 250 LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRP 301
           LGK      + R  L   +        ++PG E+P  F +Q +G+++T+ RP
Sbjct: 336 LGKQAQRAIVQRSLLLGTA--------LLPGREVPAEFDHQGKGNTLTI-RP 378


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 19/176 (10%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
             + L  LP  I  L++LK+L+L    +F+ L + +GQ+++L+EL++    ++  P  I 
Sbjct: 56  SSQKLTTLPKEIKQLQNLKSLDL-ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIG 114

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPI------NLMRRSSDLGAL--MLPSLSGLGSLT 145
            ++NL+TL          S +    FP       NL + + D   L  +L  +  L +L 
Sbjct: 115 QLQNLQTLIL--------SVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQ 166

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           KL+L    L   A+P++IG L +L+ LYLS N    LP  I  L NL+ L L D +
Sbjct: 167 KLNLDKNRL--KALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQ 220



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 13/211 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +K +P  I  L  L  L L     L   P  I  LK+L+ LNL    
Sbjct: 93  LQNLQELNLWNNQLKNLPKEIGQLQNLQTLIL-SVNRLTTFPQEIGQLKNLQKLNL-DYN 150

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   LL+ +GQ+++L++L++    ++  P+ I  ++NL+ L         ++    LP  
Sbjct: 151 QLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYL------SNNQLTILPEE 204

Query: 121 INLMR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSK 176
           I  ++  ++  LG   L  L   +G L  L L      E  I P +IG L  L+ LYLS 
Sbjct: 205 IGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSH 264

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           N   TLP  I  L NL++L L D  +L +LP
Sbjct: 265 NQLTTLPKEIGQLENLQELYLND-NQLTTLP 294



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 29/225 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L+L    +   P  I  L  L +L L     L  L   I  LK+L+ LNL    
Sbjct: 116 LQNLQTLILSVNRLTTFPQEIGQLKNLQKLNL-DYNQLTTLLQEIGQLKNLQKLNL-DKN 173

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCY 116
           + + L   +GQ+++L+EL +S   +   P  I  +KNL+ L   G N     P       
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALIL-GDNQLTILPKEIGQLQ 232

Query: 117 ---LPFPIN--LMRRSSDLGALM--------------LPSLSG-LGSLTKLDLSDCGLGE 156
              L + +N  L     ++G L               LP   G L +L +L L+D  L  
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLT- 291

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
             +P +IG L +L+T     N    LP  I  L NL+ LKL + +
Sbjct: 292 -TLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQ 335


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 13/179 (7%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP N+  L S++ L+L  C K   L   +G++  +E LD+S   ++   + +  + N+K 
Sbjct: 429 LPPNLGQLSSIRHLDLSHC-KLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKH 487

Query: 101 LSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L    C   + PP          +  +  SS+    + P +  L ++T LD+S+C L   
Sbjct: 488 LDMSECKLHSIPPEVGKLT---QLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLR-- 542

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            +P ++G L  LK L LS N    LPA I  L N++ L L  C+    L  LPP + K+
Sbjct: 543 TLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCE----LTTLPPEIGKL 597



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 10/201 (4%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +  L L K ++  +PL I  L  L  L ++    +  LP+ +  L ++K LNL  C K  
Sbjct: 163 MEHLNLSKCNLHTLPLEIWRLIQLRWLDVR-FNPIQMLPAGVGQLTNIKHLNLSYC-KLR 220

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPFP 120
            L   +G +  LE LD+ G  ++  P  +  + N+K L    CN    PP          
Sbjct: 221 ILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRLT---Q 277

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +  SS+    +   +  L ++   DLS C L    +P ++G L  L+ L LS+N   
Sbjct: 278 LQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLR--TLPPEVGRLTQLEWLELSQNPLQ 335

Query: 181 TLPASINCLFNLEKLKLEDCK 201
           TLPA I  L  L+ L +  C+
Sbjct: 336 TLPADIRQLTCLKHLDMSYCQ 356



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 24/221 (10%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +R L L+KT++  +P  +  L+ L  L L G   L  L + I  L +++ LNL  C    
Sbjct: 117 IRVLKLNKTNMVTVPTVVWRLTHLHTLEL-GSNTLNVLNAEIGLLSNMEHLNLSKC-NLH 174

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPFP 120
            L   + ++  L  LD+    I+  P+ +  + N+K L+   C     PP          
Sbjct: 175 TLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRILPPEIG------- 227

Query: 121 INLMRRSS-DLGALMLPSLSG----LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
            NL +    DL    L +L G    L ++  L L  C +    +P ++G L  L+ L LS
Sbjct: 228 -NLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMH--TLPPEVGRLTQLQWLGLS 284

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            NN  TLP+ I  L N++   L  CK    L  LPP V ++
Sbjct: 285 SNNLQTLPSEIGQLTNIKHFDLSLCK----LRTLPPEVGRL 321



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 4/158 (2%)

Query: 50  SLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP 109
           +L TL+  G +  E L E +  +E LE LD++G      P+ +  ++NLK L+   CN  
Sbjct: 24  TLLTLDFSGHY-VEQLPEELYGIEELEALDLTGKKGIKLPNELTKLQNLKVLNLNDCNLT 82

Query: 110 PSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSL 169
              A       +  +  S++   ++   +SGL ++  L L+   +    +P+ +  L  L
Sbjct: 83  TVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNM--VTVPTVVWRLTHL 140

Query: 170 KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            TL L  N    L A I  L N+E L L  C  L +LP
Sbjct: 141 HTLELGSNTLNVLNAEIGLLSNMEHLNLSKCN-LHTLP 177



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           L + +  L ++K L++  C K  ++   VG++  LE L +S   ++  P  +  + N+  
Sbjct: 475 LLAEVGQLTNVKHLDMSEC-KLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTH 533

Query: 101 LSFRGC---NGPPSSASCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGE 156
           L    C     PP          +NL   S+ L AL  P+  G L ++  LDLS C L  
Sbjct: 534 LDMSECKLRTLPPEVGRLEQLKWLNL--SSNPLQAL--PAQIGQLNNIQNLDLSSCELT- 588

Query: 157 GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
             +P +IG L  L+ L +S N   TLPA I  L N+  LK+
Sbjct: 589 -TLPPEIGKLTQLERLNVSDNPLQTLPAEIVHLTNISHLKI 628



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 8/200 (4%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++++P  +  +  L  L L G K  ++LP+ +  L++LK LNL  C     +   V ++ 
Sbjct: 35  VEQLPEELYGIEELEALDLTGKKG-IKLPNELTKLQNLKVLNLNDC-NLTTVPAVVMKLP 92

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L+ L +S       P  +  + N++ L     N        +    ++ +   S+   +
Sbjct: 93  QLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHLHTLELGSNTLNV 152

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +   +  L ++  L+LS C L    +P +I  L  L+ L +  N    LPA +  L N++
Sbjct: 153 LNAEIGLLSNMEHLNLSKCNL--HTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIK 210

Query: 194 KLKLEDCKRLQSLPQLPPNV 213
            L L  CK    L  LPP +
Sbjct: 211 HLNLSYCK----LRILPPEI 226


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L    IK +P  IE L  L  L L   + L  LP  I  L++L++L+L    
Sbjct: 162 LKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQ-LTTLPQEIGQLQNLQSLDL-STN 219

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L++L +    +   P+ I  +KNL+TL+ R  N   ++ S  +   
Sbjct: 220 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLR--NNRLTTLSKEIEQL 277

Query: 121 INLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNN 178
            NL  +S DL +  L +   G+G L  L + D G  +   +P  IG L +L+TL L  N 
Sbjct: 278 QNL--KSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ 335

Query: 179 FVTLPASINCLFNLEKL 195
             TLP  I  L NL++L
Sbjct: 336 LTTLPQEIGQLQNLQEL 352



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 27/201 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L    IK +P  IE L  L  L L   + L  LP  I  L+ L+ L  L   
Sbjct: 93  LKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQ-LTTLPQEIGQLQKLQWL-YLPKN 150

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+ L++S   I+  P  I  ++ L++L      G  ++    LP  
Sbjct: 151 QLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL------GLDNNQLTTLP-- 202

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   ++G L         +L  LDLS   L    +P +IG+L +L+ LYL  N   
Sbjct: 203 -------QEIGQLQ--------NLQSLDLSTNRLT--TLPQEIGHLQNLQDLYLVSNQLT 245

Query: 181 TLPASINCLFNLEKLKLEDCK 201
            LP  I  L NL+ L L + +
Sbjct: 246 ILPNEIRQLKNLQTLNLRNNR 266



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 37/162 (22%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L   +F+ L + +G++++L+EL+++   +   P  I  +KNL+ L+         SA+  
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNL--------SANQI 106

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              P   + +   L +L LP+      LT             +P +IG L  L+ LYL K
Sbjct: 107 KTIPKE-IEKLQKLQSLYLPN----NQLT------------TLPQEIGQLQKLQWLYLPK 149

Query: 177 NNFVTLPASINCLFNLEKLKL------------EDCKRLQSL 206
           N   TLP  I  L NL+ L L            E  ++LQSL
Sbjct: 150 NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 191



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 40/187 (21%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I  LK+L+ LNL    +   L + +GQ+++L +L++S   I+  P  I  ++ L++
Sbjct: 63  LPKEIGKLKNLQELNL-NKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQS 121

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP---------SLSGLGSLTKLDLS- 150
           L        P++    LP  I  +++   L  L LP          +  L +L  L+LS 
Sbjct: 122 LYL------PNNQLTTLPQEIGQLQK---LQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 151 -----------------DCGLGEG---AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
                              GL       +P +IG L +L++L LS N   TLP  I  L 
Sbjct: 173 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232

Query: 191 NLEKLKL 197
           NL+ L L
Sbjct: 233 NLQDLYL 239


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 28/208 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L       +P  I  L  L +L L G +    LP  I  L++L+ L+L    
Sbjct: 140 LQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQ-FTTLPKEIGQLQNLQKLDLSNN- 197

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + VGQ++SLEELD+SG      P  I   +N++ L+  G               
Sbjct: 198 RFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGN-------------- 243

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             L   S ++G           +L  LDLS        +P +IG L +L+TL LS N F 
Sbjct: 244 -QLTSLSKEIGQFQ--------NLQGLDLSKNRF--TTLPKEIGQLQNLETLNLSGNRFT 292

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           T P  +    N+  L L+D  +L++LP+
Sbjct: 293 TFPKEVRRQENITWLYLDD-NQLKALPK 319



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 27/190 (14%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L ++  +  +P +I  L  L  L L G + L  LP  I  L++L+ L  L   +  +L +
Sbjct: 55  LFNREQLTSIPNAIGRLQNLRILELTGSQ-LTSLPKEIGRLQNLQGL-FLNINRLSSLPQ 112

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
            +GQ+++L+ L +S   +   P  I  ++NL+ L          S++ +   P       
Sbjct: 113 EIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDL--------SSNRFTTLP------- 157

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
            ++G L         +L +LDLS  G     +P +IG L +L+ L LS N F TLP  + 
Sbjct: 158 KEIGQLQ--------NLQELDLS--GNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVG 207

Query: 188 CLFNLEKLKL 197
            L +LE+L L
Sbjct: 208 QLQSLEELDL 217



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 15/147 (10%)

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI----NL 123
            +G++++L  L+++G+ +   P  I  ++NL+ L F   N   S     LP  I    NL
Sbjct: 67  AIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGL-FLNINRLSS-----LPQEIGQLQNL 120

Query: 124 MRRSSDLGALM-LPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
            R    L  L  LP   G L +L +LDLS        +P +IG L +L+ L LS N F T
Sbjct: 121 KRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFT--TLPKEIGQLQNLQELDLSGNQFTT 178

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQ 208
           LP  I  L NL+KL L +  R  +LP+
Sbjct: 179 LPKEIGQLQNLQKLDLSN-NRFTTLPK 204


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQDNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
            TLP  I  L NL+ L L D  +L +LP
Sbjct: 199 TTLPKEIGQLQNLQTLNLSD-NQLATLP 225



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I LL  L  L L G   L ++PS I  L++L+ LNL    + E L + +GQ+ +L+
Sbjct: 391 LPKEISLLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNL-EANELERLPKEIGQLRNLQ 448

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-----------INLMR 125
           +L +    ++  P+ I  +K L+ L          S + +  FP           +NL R
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEIGKLENLQTLNLQR 500

Query: 126 RS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              ++L A     +  L +L +LDL+D       +P +IG L  L+TL L  N   TLP 
Sbjct: 501 NQLTNLTA----EIGQLQNLQELDLNDNQFT--VLPKEIGKLKKLQTLDLRNNQLTTLPT 554

Query: 185 SINCLFNLEKLKLED 199
            I  L NL+ L L++
Sbjct: 555 EIGQLQNLQWLYLQN 569



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    + +   +GQ+ +LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISLLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    L A I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 35/229 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQDN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++S   +   P  I  ++NL+ L  R      ++     P  
Sbjct: 197 QFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLR------NNRLTVFPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLQNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL-PQLPPNVEKVRVNGC 221
             P  I  L NL+ L+       L++ KR+Q L P    ++ +V  NG 
Sbjct: 292 VFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLREVAENGV 340



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|168032887|ref|XP_001768949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679861|gb|EDQ66303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 538

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 16/227 (7%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L+ L    L GC +L  LP+ + +L SL T ++ GC    +L   +G 
Sbjct: 77  SSLTSLPNELGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGN 136

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  L+I G +++   P+ +  + +L TL+   C+   S     LP+ +  +   + L
Sbjct: 137 LTSLTTLNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTS-----LPYELGNLTSLTTL 191

Query: 131 GALMLPSLS----GLGSLTKLDLSDCGLGEG--AIPSDIGNLHSLKTLYLS-KNNFVTLP 183
                 SL+     LG+LT L + D G      ++P+++ NL SL  L +   ++ ++LP
Sbjct: 192 NMECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTNLNIQWYSSLISLP 251

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
             ++ L +L  L ++ C  L SLP    N   +  +R+N C+SL +L
Sbjct: 252 NELDNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSL 298



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 27/234 (11%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  L+ L  L ++ C +L  LP+ + +L SL TL +  C    +L   +G + 
Sbjct: 7   LTSLPNELGNLTSLTTLDIRRCSSLTSLPNELGNLISLTTLRMNECSSLTSLPNELGNLT 66

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL  LDI   +++   P+ +  + +L T    GC+   S     LP         ++LG 
Sbjct: 67  SLTTLDIRRCSSLTSLPNELGNLTSLTTFDLSGCSSLTS-----LP---------NELG- 111

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                   L SLT  D+  C L   ++P+++GNL SL TL +   ++  +LP  +  L +
Sbjct: 112 -------NLTSLTTFDIQGC-LSLTSLPNELGNLTSLTTLNIDGWSSLTSLPNELGNLTS 163

Query: 192 LEKLKLEDCKRLQSLPQLPPNVEKVRVNG--CASLVTLLGALKLRKSSCTIIDF 243
           L  L +E C  L SLP    N+  +      C S +TLL       +S TIID 
Sbjct: 164 LTTLNMEYCSSLTSLPYELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDI 217



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 28/221 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L  L  L +  C +L  LP+ + +L SL TL++  C    +L   +G 
Sbjct: 29  SSLTSLPNELGNLISLTTLRMNECSSLTSLPNELGNLTSLTTLDIRRCSSLTSLPNELGN 88

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL   D+SG +++   P+ +  + +L T   +GC              ++L    ++L
Sbjct: 89  LTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGC--------------LSLTSLPNEL 134

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
           G         L SLT L++ D      ++P+++GNL SL TL +   ++  +LP  +  L
Sbjct: 135 G--------NLTSLTTLNI-DGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPYELGNL 185

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
            +L  L +E C  L  LP    N+     + +  C+SL +L
Sbjct: 186 TSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSL 226



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 27/221 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L+ L  L ++ C +L+ LPS + +L  L T N+  C    +L   +G 
Sbjct: 317 SSLTSLPNELGNLTSLTTLNIEWCSSLISLPSELGNLTILTTFNIGRCSSLTSLSNELGN 376

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           ++SL   DI   +++   P+    + +L T   + C+   S     LP         SD 
Sbjct: 377 LKSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTS-----LP-------NESD- 423

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
                     L SLT  DLS       ++P+++GNL SL TL +   ++  +LP     L
Sbjct: 424 ---------NLTSLTSFDLSGWCSSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNESGNL 474

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
            +L  L++ +C  L SLP    N+  +    +  C+SL +L
Sbjct: 475 ISLTTLRMNECSSLTSLPNELGNLTSLTTFYIGRCSSLTSL 515


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL--- 66
           D T   + PL++ +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL   
Sbjct: 39  DLTKALQNPLNVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTVL 86

Query: 67  -ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
            + +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGQLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQDNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
            TLP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TTLPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 28/197 (14%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L  L L G   L  +PS I  LK+L+ LNL    + E L + +GQ+ +L+
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNL-EANELERLPKEIGQLRNLQ 448

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-----------INLMR 125
           +L +    ++  P+ I  +K L+ L          S + +  FP           +NL R
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEIGKLENLQTLNLQR 500

Query: 126 RS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              ++L A     +  L +L +LDL+D       +P +IG L  L+TL L  N   TLP 
Sbjct: 501 NQLTNLTA----EIGQLQNLQELDLNDNQFT--VLPKEIGKLKKLQTLDLRNNQLTTLPT 554

Query: 185 SINCLFNLEKLKLEDCK 201
            I  L NL+ L L++ +
Sbjct: 555 EIGQLQNLQWLYLQNNQ 571



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    +N+   +GQ+++LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    L A I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQDN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R         +    FP
Sbjct: 197 QFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--------NRLTVFP 248

Query: 121 INLMRRSSDLGALMLPSLSGLGS----LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
                   ++G L   +L  LGS    LT            A+P ++G L +L+TL L  
Sbjct: 249 -------KEIGQLQ--NLQMLGSPENRLT------------ALPKEMGQLQNLQTLNLVN 287

Query: 177 NNFVTLPASINCLFNLEKLK-------LEDCKRLQSL-PQLPPNVEKVRVNGC 221
           N     P  I  L NL+ L+       L++ KR+Q L P    ++ +V  NG 
Sbjct: 288 NRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGV 340



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTVLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|418716289|ref|ZP_13276303.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787972|gb|EKR81701.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 1616

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ CK L  +P +I +LK L  L+L    +   L 
Sbjct: 1226 LNLSGTKFERFPISVTRFQNLTSLSLRDCK-LSEVPESIGNLKRLIDLHL-NSNQLTTLP 1283

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L +L I        P ++  +KNLKTL  R       +    LP  I  +  
Sbjct: 1284 ASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARW------NQISTLPNEIGNLTS 1337

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSD------------------CGLGEGAI--- 159
              DL       + +  ++  L SLTK+ LS                     +GE  I   
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK+L + +    +LP SI  L  LE + L   K  + LP    N+E ++
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAK-FRDLPDFLANMESLK 1454



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 16/201 (7%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L +L L+   +  +P S+  L  L QL +        +P  + SLK+LKTL L    +  
Sbjct: 1269 LIDLHLNSNQLTTLPASLGTLEQLTQLHIDS-NPFTTIPDAVLSLKNLKTL-LARWNQIS 1326

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
             L   +G + SLE+L++    +   P++I   +NL +L+  G +    S     P PI  
Sbjct: 1327 TLPNEIGNLTSLEDLNLHDNQLSSLPTTI---QNLSSLTKIGLSKNKFSE---FPEPILY 1380

Query: 124  MR--RSSDLGA---LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
            ++  +  D+G      LP ++  L +L  LD+ +  +   ++P  I NL  L+T+YL K 
Sbjct: 1381 LKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETWIE--SLPQSIQNLTQLETIYLPKA 1438

Query: 178  NFVTLPASINCLFNLEKLKLE 198
             F  LP  +  + +L+K+K E
Sbjct: 1439 KFRDLPDFLANMESLKKIKFE 1459



 Score = 49.3 bits (116), Expect = 0.004,   Method: Composition-based stats.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 36/190 (18%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC-FKFENLLETVG 70
            T I+E+    +  + L +LT+ G    V   S ++ LK+LK + L     K  N+L +  
Sbjct: 1142 TSIQEL----KFFTKLEELTINGP---VTDSSLLSELKNLKKIELDDWNLKDLNVLNSCI 1194

Query: 71   QVESLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
             +E +E  +I G  T   C   S  L ++  T+          S + +  FPI++ R   
Sbjct: 1195 NLEEIELRNIKGFETDFDC---SELLNESKATIHLN------LSGTKFERFPISVTR--- 1242

Query: 129  DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                          +LT L L DC L E  +P  IGNL  L  L+L+ N   TLPAS+  
Sbjct: 1243 ------------FQNLTSLSLRDCKLSE--VPESIGNLKRLIDLHLNSNQLTTLPASLGT 1288

Query: 189  LFNLEKLKLE 198
            L  L +L ++
Sbjct: 1289 LEQLTQLHID 1298


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQDNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
            TLP  I  L NL+ L L D  +L +LP
Sbjct: 199 TTLPKEIGQLQNLQTLNLSD-NQLATLP 225



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 28/195 (14%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L  L L G   L  +PS I  LK+L+ LNL    + E L + +GQ+ +L+
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNL-EANELERLPKEIGQLRNLQ 448

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-----------INLMR 125
           +L +    ++  P+ I  +K L+ L          S + +  FP           +NL R
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEIGKLENLQTLNLQR 500

Query: 126 RS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              ++L A     +  L +L +LDL+D       +P +IG L  L+TL L  N   TLP 
Sbjct: 501 NQLTNLTA----EIGQLQNLQELDLNDNQFT--VLPKEIGKLKKLQTLDLRNNQLTTLPT 554

Query: 185 SINCLFNLEKLKLED 199
            I  L NL+ L L++
Sbjct: 555 EIGQLQNLQWLYLQN 569



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    +N+   +GQ+++LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    L A I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 35/229 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQDN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++S   +   P  I  ++NL+ L  R      ++     P  
Sbjct: 197 QFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLR------NNRLTVFPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLQNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL-PQLPPNVEKVRVNGC 221
             P  I  L NL+ L+       L++ KR+Q L P    ++ +V  NG 
Sbjct: 292 VFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGV 340



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|325914143|ref|ZP_08176496.1| Putative Xanthomonas outer protein L [Xanthomonas vesicatoria ATCC
           35937]
 gi|325539646|gb|EGD11289.1| Putative Xanthomonas outer protein L [Xanthomonas vesicatoria ATCC
           35937]
          Length = 661

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 37/217 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL    N +R LP++I SL  L+ L++  C + 
Sbjct: 228 LQHMTIDAAGLMELPDAMQQFAGLETLTL--AHNPLRSLPASIASLSRLRELSIRACPEL 285

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T IR  P+SI  ++NLK+L            
Sbjct: 286 TELPEGLASTDASGAHQGLVNLQSLRLERTGIRSLPASIANLQNLKSLKI---------- 335

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                       R+S L AL  P++  L  L +LDL  C       P   G    LK L 
Sbjct: 336 ------------RNSPLSALG-PAIHQLPKLEELDLRGCTALRD-YPPIFGGGAPLKRLI 381

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           L   +N  TLP  I+ L  LE+L L  C  L  LP+L
Sbjct: 382 LKDCSNLATLPHDIHRLRQLEELDLRGCVNLSRLPRL 418



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLK--TLNLLGCFKFENLLETVGQVESLEELDISG 82
           +G V L L+    L + P     L  L+  T++  G  +  + ++   Q   LE L ++ 
Sbjct: 203 TGRVALELRSVP-LPQFPDQAFRLSHLQHMTIDAAGLMELPDAMQ---QFAGLETLTLAH 258

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG 142
             +R  P+SI  +  L+ LS R C             P  L   S+D       +  GL 
Sbjct: 259 NPLRSLPASIASLSRLRELSIRAC-------PELTELPEGLA--STDASG----AHQGLV 305

Query: 143 SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR 202
           +L  L L   G+   ++P+ I NL +LK+L +  +    L  +I+ L  LE+L L  C  
Sbjct: 306 NLQSLRLERTGI--RSLPASIANLQNLKSLKIRNSPLSALGPAIHQLPKLEELDLRGCTA 363

Query: 203 LQSLPQL-----PPNVEKVRVNGCASLVTL 227
           L+  P +     P  ++++ +  C++L TL
Sbjct: 364 LRDYPPIFGGGAP--LKRLILKDCSNLATL 391



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVES 74
           L +L LK C NL  LP +I+ L+ L+ L+L GC     L   + Q+ +
Sbjct: 377 LKRLILKDCSNLATLPHDIHRLRQLEELDLRGCVNLSRLPRLIAQLPA 424


>gi|13517464|gb|AAK28803.1|AF310958_1 resistance-like protein P1-A [Linum usitatissimum]
          Length = 1200

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 36/186 (19%)

Query: 135  LPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
            LP +S  + +LT L++ DC     +IP+ I NL SL++LYL +    +LP+SI  L  L 
Sbjct: 886  LPEISEPMNTLTSLEVVDCR-SLTSIPTSISNLRSLRSLYLVETGIKSLPSSIQELRQLY 944

Query: 194  KLKLEDCKRLQ------------------------SLPQLPPNVEKVRVNGCASLVTLLG 229
             + L DCK L+                        SLP+LPPN++++ V+ C SL     
Sbjct: 945  SIDLRDCKSLESIPNSIHKLSKLVTFSMSGCESIPSLPELPPNLKELDVSRCKSLQA--- 1001

Query: 230  ALKLRKSSCTII----DFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
               L  ++C +      + +    L +   A  M    +    +PS++  +   GSE+P+
Sbjct: 1002 ---LPSNTCKLWYLNRIYFEECPQLDQTSPAELMANFLVHASLSPSYERQVRCSGSELPE 1058

Query: 286  WFMYQN 291
            WF Y++
Sbjct: 1059 WFSYRS 1064



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 4/107 (3%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  LR L L +T IK +P SI+ L  L  + L+ CK+L  +P++I+ L  L T ++ GC 
Sbjct: 917  LRSLRSLYLVETGIKSLPSSIQELRQLYSIDLRDCKSLESIPNSIHKLSKLVTFSMSGCE 976

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
               +L E      +L+ELD+S   +++  PS+   +  L  + F  C
Sbjct: 977  SIPSLPEL---PPNLKELDVSRCKSLQALPSNTCKLWYLNRIYFEEC 1020



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 34/167 (20%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            I+ +P   E ++ L  L +  C++L  +P++I++L+SL++L L+                
Sbjct: 883  IESLPEISEPMNTLTSLEVVDCRSLTSIPTSISNLRSLRSLYLVE--------------- 927

Query: 74   SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR---SSDL 130
                     T I+  PSSI  ++ L ++  R C    S     +P  I+ + +    S  
Sbjct: 928  ---------TGIKSLPSSIQELRQLYSIDLRDCKSLES-----IPNSIHKLSKLVTFSMS 973

Query: 131  GALMLPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
            G   +PSL  L  +L +LD+S C   + A+PS+   L  L  +Y  +
Sbjct: 974  GCESIPSLPELPPNLKELDVSRCKSLQ-ALPSNTCKLWYLNRIYFEE 1019


>gi|356560037|ref|XP_003548302.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1083

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 112/290 (38%), Gaps = 53/290 (18%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L +L+  GC+ L   P    +L SL+TL L  C   E   E +G++E++ EL 
Sbjct: 668 SIGFLKKLKKLSAYGCRKLTSFPPL--NLTSLETLQLSSCSSLEYFPEILGEMENIRELR 725

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL--------- 130
           ++G  I+  P S   +  L+ L+  GC          LP  + +M   S           
Sbjct: 726 LTGLYIKELPFSFQNLTGLRLLALSGC------GIVQLPCSLAMMPELSSFYTDYCNRWQ 779

Query: 131 ----GALMLPSLSGLGSLTKLD-LSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
                       S + S  +L   ++C L +    +       +  L LS NNF  LP  
Sbjct: 780 WIELEEGEEKLGSIISSKAQLFCATNCNLCDDFFLAGFKRFAHVGYLNLSGNNFTILPEF 839

Query: 186 INCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
              L  L  L + DC+ LQ +  LPP +E      C S  +   ++ L +          
Sbjct: 840 FKELQFLRTLDVSDCEHLQEIRGLPPILEYFDARNCVSFTSSSTSMLLNQ---------- 889

Query: 246 SLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSS 295
                              E+  A   +F  V PG+ IP+WF  Q+ G S
Sbjct: 890 -------------------ELHEAGGTQF--VFPGTRIPEWFDQQSSGPS 918


>gi|255078974|ref|XP_002503067.1| predicted protein [Micromonas sp. RCC299]
 gi|226518333|gb|ACO64325.1| predicted protein [Micromonas sp. RCC299]
          Length = 252

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 30/221 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L  L L+   +  +P  +  L+ L +L+L G + L  +P+ I  L SL  LNL G  
Sbjct: 50  LTSLEMLNLNYNQLTSLPAEVGQLTALKELSLYGNQ-LTSVPAEIGQLASLTELNLGGGK 108

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  ++   VGQ+ SLE L +    +   P+ I  + +L+ L          +    +P  
Sbjct: 109 QLTSVPAEVGQLTSLERLWLHDNRLTSVPAEIGQLASLRELWLN------YNQLTSVPAE 162

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  +R                 SL  L L+D  L   ++P+DIG L SL+ L+L  N   
Sbjct: 163 IGQLR-----------------SLRWLFLNDNRLT--SVPADIGQLTSLEGLWLHANQLT 203

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
           ++PA I  L +LEKL L D +    L  +P  + ++R  GC
Sbjct: 204 SVPAEIGQLTSLEKLYLGDNR----LTSVPAAIRELRAAGC 240


>gi|334183877|ref|NP_001185386.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332197260|gb|AEE35381.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1183

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 50/282 (17%)

Query: 8   LLDKT---DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           +LD T   +++E+P  +     L +L L+ C +LV++P +IN L  L+ LN++ C    +
Sbjct: 630 ILDVTGSRNLRELP-ELSTAVNLEELILESCTSLVQIPESINRLY-LRKLNMMYC----D 683

Query: 65  LLETVGQVESLEELDISGTAIRCP----PSSIFLMKNLKTLSFRG-----CNGPPSSASC 115
            LE V  V  L+E  +S   ++      P S   + +L  L+ +G      +G   +   
Sbjct: 684 GLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLSSLTDLAIQGKIFIKLSGLSGTGD- 742

Query: 116 YLPFP-----------------------INLMRRSSDLGALMLPSLS--GLGSLTKLDLS 150
           +L F                        +++ R S  L  +    LS      LT+L L 
Sbjct: 743 HLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRFSYRLDPVNFSCLSFADFPCLTELKLI 802

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP 210
           +  + +  IP DI  L  L+TL L  N+FV LP S+  L  L+ L L +C+RL++LPQL 
Sbjct: 803 NLNIED--IPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQL- 859

Query: 211 PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF-VDSLKLLG 251
             VE++ ++GC  L +L+G L   + +  ++DF V+  K LG
Sbjct: 860 SQVERLVLSGCVKLGSLMGILGAGRYN--LLDFCVEKCKSLG 899



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 30/227 (13%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           CL EL L   +I+++P  I  L  L  L L G  + V LP+++  L  LK L+L  C + 
Sbjct: 795 CLTELKLINLNIEDIPEDICQLQLLETLDLGG-NDFVYLPTSMGQLAMLKYLSLSNCRR- 852

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
              L+ + Q+  +E L +SG               +K  S  G  G  +     L F + 
Sbjct: 853 ---LKALPQLSQVERLVLSGC--------------VKLGSLMGILG--AGRYNLLDFCV- 892

Query: 123 LMRRSSDLGALM-----LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              +   LG+LM       S  G   L +L L +C     ++  ++ +   L  L LS  
Sbjct: 893 --EKCKSLGSLMGILSVEKSAPGRNELLELSLENCK-SLVSLSEELSHFTKLTYLDLSSL 949

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            F  +P SI  L  +  L L +C ++ SL  LP +++ +  +GC SL
Sbjct: 950 EFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLKYLYAHGCESL 996


>gi|227438243|gb|ACP30611.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1050

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 42/299 (14%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P  +     L +L L  C++L  LPS+I  LK+LKTLN+  C K E  L T   +E
Sbjct: 651 LKEVP-DLSKAPNLEELYLADCQSLEMLPSSIRYLKNLKTLNMEECSKLE-FLPTNINLE 708

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-- 130
           SL  L + G + IR  P    +  N+  LS        ++A   +P+ I  M   + L  
Sbjct: 709 SLSNLTLYGCSLIRSFPD---ISHNISVLSLE------NTAIEEVPWWIEKMTGLTGLFM 759

Query: 131 ---GAL--MLPSLSGLGSLTKLDLSDC-GLGEGAIPSD---IGNLHSLKTLYLSKNNFVT 181
              G L  + P++S L  L  +D S C  L E +   D   +   + +  L +S N F  
Sbjct: 760 SGCGKLSRISPNISKLKHLEDVDFSLCYALTEDSWQDDPQVVPAPNPIGDLDMSDNTFTR 819

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV-RVNGCASLVTLLGALKLRKSSCTI 240
           LP S+  +   ++L + +C++L SLP+L  +  K+ R   C SL ++     L ++  TI
Sbjct: 820 LPHSLVSI-KPQELNIGNCRKLVSLPELQTSSLKILRAQDCESLESI---SHLFRNPETI 875

Query: 241 IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEI-PKWFMYQNEGSSITV 298
           + F++  KL  +  +  S+ +              +++PG ++ P++F ++  GS +T+
Sbjct: 876 LHFINCFKLEQECLIRSSVFK-------------YMILPGRQVPPEYFTHRASGSYLTI 921



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF-----K 61
           L L+ T I+E+P  IE ++GL  L + GC  L R+  NI+ LK L+ ++   C+      
Sbjct: 734 LSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNISKLKHLEDVDFSLCYALTEDS 793

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMK 96
           +++  + V     + +LD+S       P S+  +K
Sbjct: 794 WQDDPQVVPAPNPIGDLDMSDNTFTRLPHSLVSIK 828


>gi|6721163|gb|AAF26791.1|AC016829_15 putative disease resistance protein [Arabidopsis thaliana]
          Length = 896

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 28/194 (14%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++KE+P  +   + L +L+++ C +LV+LPS+I    +LK +NL  C     L  + G +
Sbjct: 709 NLKELP-DLSTATNLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNL 767

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +L+ELD+   +++   P+S   + N+++L F  C+                        
Sbjct: 768 TNLQELDLRECSSLVELPTSFGNLANVESLEFYECS-----------------------S 804

Query: 132 ALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
            + LPS  G L +L  L L +C      +PS  GNL +L+ L L K +  V LP+S   L
Sbjct: 805 LVKLPSTFGNLTNLRVLGLRECS-SMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNL 863

Query: 190 FNLEKLKLEDCKRL 203
            NLE L L DC  L
Sbjct: 864 TNLENLDLRDCSSL 877



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 36/193 (18%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E L E +  + +LE LD++ +        +    NL+ LS   C     S+   LP  
Sbjct: 685 KLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERC-----SSLVKLP-- 737

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                           S+    +L K++L +C L    +PS  GNL +L+ L L + ++ 
Sbjct: 738 ---------------SSIGEATNLKKINLREC-LSLVELPSSFGNLTNLQELDLRECSSL 781

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG---CASLVTL--------- 227
           V LP S   L N+E L+  +C  L  LP    N+  +RV G   C+S+V L         
Sbjct: 782 VELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTN 841

Query: 228 LGALKLRKSSCTI 240
           L  L LRK S  +
Sbjct: 842 LQVLNLRKCSTLV 854



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+EL L + + + E+P S   L+ +  L    C +LV+LPS   +L +L+ L L  C   
Sbjct: 770 LQELDLRECSSLVELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECSSM 829

Query: 63  ENLLETVGQVESLEELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNG-PPSS 112
             L  + G + +L+ L++   +     PSS   + NL+ L  R C+   PSS
Sbjct: 830 VELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSLLPSS 881



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P +   L+ L  L L+ C ++V LPS+  +L +L+ LNL  C     L  +   + +L
Sbjct: 807 KLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNLTNL 866

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
           E LD+   +    PSS   +  LK L F  C
Sbjct: 867 ENLDLRDCS-SLLPSSFGNVTYLKRLKFYKC 896


>gi|5903073|gb|AAD55631.1|AC008017_4 Similar to disease resistance proteins [Arabidopsis thaliana]
          Length = 1112

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 50/282 (17%)

Query: 8   LLDKT---DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           +LD T   +++E+P  +     L +L L+ C +LV++P +IN L  L+ LN++ C    +
Sbjct: 559 ILDVTGSRNLRELP-ELSTAVNLEELILESCTSLVQIPESINRLY-LRKLNMMYC----D 612

Query: 65  LLETVGQVESLEELDISGTAIRCP----PSSIFLMKNLKTLSFRG-----CNGPPSSASC 115
            LE V  V  L+E  +S   ++      P S   + +L  L+ +G      +G   +   
Sbjct: 613 GLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLSSLTDLAIQGKIFIKLSGLSGTGD- 671

Query: 116 YLPFP-----------------------INLMRRSSDLGALMLPSLS--GLGSLTKLDLS 150
           +L F                        +++ R S  L  +    LS      LT+L L 
Sbjct: 672 HLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRFSYRLDPVNFSCLSFADFPCLTELKLI 731

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP 210
           +  + +  IP DI  L  L+TL L  N+FV LP S+  L  L+ L L +C+RL++LPQL 
Sbjct: 732 NLNIED--IPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQL- 788

Query: 211 PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF-VDSLKLLG 251
             VE++ ++GC  L +L+G L   + +  ++DF V+  K LG
Sbjct: 789 SQVERLVLSGCVKLGSLMGILGAGRYN--LLDFCVEKCKSLG 828



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 30/227 (13%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           CL EL L   +I+++P  I  L  L  L L G  + V LP+++  L  LK L+L  C + 
Sbjct: 724 CLTELKLINLNIEDIPEDICQLQLLETLDLGG-NDFVYLPTSMGQLAMLKYLSLSNCRR- 781

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
              L+ + Q+  +E L +SG               +K  S  G  G  +     L F + 
Sbjct: 782 ---LKALPQLSQVERLVLSGC--------------VKLGSLMGILG--AGRYNLLDFCV- 821

Query: 123 LMRRSSDLGALM-----LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              +   LG+LM       S  G   L +L L +C     ++  ++ +   L  L LS  
Sbjct: 822 --EKCKSLGSLMGILSVEKSAPGRNELLELSLENCK-SLVSLSEELSHFTKLTYLDLSSL 878

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            F  +P SI  L  +  L L +C ++ SL  LP +++ +  +GC SL
Sbjct: 879 EFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLKYLYAHGCESL 925


>gi|413934802|gb|AFW69353.1| hypothetical protein ZEAMMB73_341496 [Zea mays]
          Length = 1368

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 11/224 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++CL  L L     +++P+ I  L  L  L L GC  L+ +P +I  L+ L  L+L GC 
Sbjct: 593 LKCLNALNLSAGYFQKLPVQIVNLEKLHYLNLHGCSRLMLIPESICELRDLVHLDLSGCI 652

Query: 61  KFENLLETVGQVESLEELDISG--TAIRCPPSSIFL--MKNLKTLSFRGCNGPPSSASCY 116
               L  + G++  L  LD+SG    +  P S   L  ++NL   SF      P      
Sbjct: 653 NLRVLPTSFGKLHKLSFLDMSGCLNLVSLPESFCDLRSLENLNLSSFHELRELPLGNHQE 712

Query: 117 LPFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
           L     ++  S+     +LP S   L  L  L+LS C      +P D G    L+ L LS
Sbjct: 713 LL----ILDMSNCHKIQILPMSFCNLLHLEDLNLS-CCYELQELPEDFGKNRGLRILDLS 767

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
             +   TLP S   L N+EKL L DC  L  LP+L   ++K++V
Sbjct: 768 NCHRLQTLPDSFTDLVNIEKLILSDCWELVQLPELLGFLQKIQV 811



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 104/228 (45%), Gaps = 27/228 (11%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P SI  L  LV L L GC NL  LP++   L  L  L++ GC    +L E+   + SLE
Sbjct: 633 IPESICELRDLVHLDLSGCINLRVLPTSFGKLHKLSFLDMSGCLNLVSLPESFCDLRSLE 692

Query: 77  ELDISG-TAIRCPPSS------IFLMKN---LKTLSFRGCN----GPPSSASCY----LP 118
            L++S    +R  P        I  M N   ++ L    CN       + + CY    LP
Sbjct: 693 NLNLSSFHELRELPLGNHQELLILDMSNCHKIQILPMSFCNLLHLEDLNLSCCYELQELP 752

Query: 119 --FPINLMRRSSDLGAL----MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
             F  N   R  DL        LP S + L ++ KL LSDC      +P  +G L  ++ 
Sbjct: 753 EDFGKNRGLRILDLSNCHRLQTLPDSFTDLVNIEKLILSDC-WELVQLPELLGFLQKIQV 811

Query: 172 LYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           L LS  +    LP S+  L NLE L L  C  L+ +P    +++K+++
Sbjct: 812 LDLSCCSQLFALPESVTKLTNLEHLNLSCCISLEKMPGDYGSLKKLKL 859



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++E+PL       L+ L +  C  +  LP +  +L  L+ LNL  C++ + L E  G+ 
Sbjct: 701 ELRELPLGNH--QELLILDMSNCHKIQILPMSFCNLLHLEDLNLSCCYELQELPEDFGKN 758

Query: 73  ESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
             L  LD+S    ++  P S   + N++ L    C          LP  +  +++   L 
Sbjct: 759 RGLRILDLSNCHRLQTLPDSFTDLVNIEKLILSDC-----WELVQLPELLGFLQKIQVLD 813

Query: 132 A------LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
                    LP S++ L +L  L+LS C +    +P D G+L  LK L +S    V +P 
Sbjct: 814 LSCCSQLFALPESVTKLTNLEHLNLS-CCISLEKMPGDYGSLKKLKLLNISYCFKVRIPN 872

Query: 185 SINCLFNLEKL 195
            I  + NL+ L
Sbjct: 873 GIANMSNLKCL 883



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           +L D  ++ ++P  +  L  +  L L  C  L  LP ++  L +L+ LNL  C   E + 
Sbjct: 789 ILSDCWELVQLPELLGFLQKIQVLDLSCCSQLFALPESVTKLTNLEHLNLSCCISLEKMP 848

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
              G ++ L+ L+IS       P+ I  M NLK L   G +G
Sbjct: 849 GDYGSLKKLKLLNISYCFKVRIPNGIANMSNLKCLMAVGLDG 890



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 83/199 (41%), Gaps = 29/199 (14%)

Query: 37  NLVRLPSNINS-LKSLKTLNLLGCFKFENLLETVGQVES--LEELDISGTAIRCPPSSIF 93
           N V +P N  + L   K+L+   C + +    ++    S  L  LDISG ++   PS + 
Sbjct: 509 NYVEVPMNSKAALCKAKSLHFRDCKRLQISGRSLSLTLSKFLRVLDISGCSMLGLPSQLN 568

Query: 94  LMKNLKTL------------SFRG---CNGPPSSASCYLPFPINLMRRSS-------DLG 131
            MK L+ L            SF G    N    SA  +   P+ ++              
Sbjct: 569 QMKQLRYLDASGMQNELKQESFAGLKCLNALNLSAGYFQKLPVQIVNLEKLHYLNLHGCS 628

Query: 132 ALML--PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVTLPASINC 188
            LML   S+  L  L  LDLS C +    +P+  G LH L  L +S   N V+LP S   
Sbjct: 629 RLMLIPESICELRDLVHLDLSGC-INLRVLPTSFGKLHKLSFLDMSGCLNLVSLPESFCD 687

Query: 189 LFNLEKLKLEDCKRLQSLP 207
           L +LE L L     L+ LP
Sbjct: 688 LRSLENLNLSSFHELRELP 706


>gi|417760913|ref|ZP_12408927.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417775393|ref|ZP_12423246.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673628|ref|ZP_13234941.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942907|gb|EKN88510.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410574718|gb|EKQ37747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579289|gb|EKQ47137.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 349

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 5/206 (2%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            +R L+LD  D+K     I  L  L +L   G KNL   P  I  L++LK LN LG  + 
Sbjct: 20  LVRTLVLDSFDLKSFTEEIVKLQNLERLIFNG-KNLKIFPKTITKLRNLKELN-LGRNQI 77

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +L E +G++++L+ELD+S   +   P  I  +KNL+ L+              LP  + 
Sbjct: 78  SSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLK 137

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           ++  S +        +  L +L  LD S+  L E  +P  +G L +L  LYL  N    L
Sbjct: 138 ILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKE--LPEKLGQLQNLNILYLLGNELKVL 195

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ 208
           P+S +   +L+ L L +  R Q  P+
Sbjct: 196 PSSFSEFRSLKSLNL-NYNRFQVFPK 220



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 32/233 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L+EL L +  I  +P  I  L  L +L L   + L  LP  I +LK+L+ L L    
Sbjct: 64  LRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQ-LTSLPVEIGNLKNLEILTLYRNR 122

Query: 57  ------------------LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNL 98
                             L   KF    + + Q+++LE LD S   ++  P  +  ++NL
Sbjct: 123 ISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNL 182

Query: 99  KTLSFRG--CNGPPSSASCYLPFP-INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
             L   G      PSS S +     +NL      +    L SL  L +L        G  
Sbjct: 183 NILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLEL-----TGNQ 237

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
              +P +IGNL +L +L+L  N    LP  I  L NLE+L L++  +L +LP+
Sbjct: 238 FTFLPEEIGNLDNLNSLFLEANRLRQLPKGIGKLQNLERLYLQE-NQLTTLPE 289


>gi|356506545|ref|XP_003522040.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1024

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 31/302 (10%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDIS-GTAI 85
           LV L L  C  + +L   + +L +LK + L  C    N L    +  +L+ LD+S  + +
Sbjct: 590 LVILDL-SCSRVEKLWHEVKNLVNLKNVKLRWCVLL-NELPDFSKSTNLKVLDVSCSSGL 647

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLT 145
                SIF +  L+ L   GC+     +S        L    SD   L   S++   ++ 
Sbjct: 648 TSVHPSIFSLHKLEKLDLSGCSSLIKFSSDDGHLSSLLYLNLSDCEELREFSVTA-ENVV 706

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQS 205
           +LDL+  G+   ++P   G+L  L+ L+L +++  +LP  IN L  L  L L  C  L  
Sbjct: 707 ELDLT--GILISSLPLSFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLCI 764

Query: 206 LPQLPPNVEKVRVNGCASLVTLL---GALKLRKSSCTIIDFVDSLKLLGKNGLAISM--- 259
           LP+LPP++E +  + C SL T+L    A++  + +   ++F + LKL   + +AI +   
Sbjct: 765 LPKLPPSLETLHADECESLETVLFPSTAVEQFEENRKRVEFWNYLKLDEFSLMAIELNAQ 824

Query: 260 ---LREFLEVVSAP----------------SHKFSIVVPGSEIPKWFMYQNEGSSITVTR 300
              ++   + +SAP                S++   + PGS +P+W  Y+     + +  
Sbjct: 825 INVMKFAYQHLSAPILDHVENYNDYKDLHDSYQAVYMYPGSNVPEWLAYKTRKDYVIIDL 884

Query: 301 PS 302
            S
Sbjct: 885 SS 886


>gi|345291883|gb|AEN82433.1| AT4G12010-like protein, partial [Neslia paniculata]
          Length = 165

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 88/185 (47%), Gaps = 23/185 (12%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           LLLD T IK +P SIE L  L  L LK CK L  L S++  LK L+ L L GC + +   
Sbjct: 4   LLLDGTAIKSLPESIESLRKLALLNLKNCKKLKHLSSDLYKLKRLQELILSGCSQLQVFP 63

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           E    +ESLE L +  T I   P  + L  N+KT S  G                     
Sbjct: 64  EIKENMESLEILLLDDTTITEMPKMMHL-SNIKTFSLCG--------------------T 102

Query: 127 SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
           S+      +P  SG   LT L LS C L +  +P +IG L SL++L LS NN   LP S 
Sbjct: 103 STQDSMFFMPPTSGCSRLTDLYLSRCSLYK--LPGNIGGLSSLQSLCLSGNNIENLPESF 160

Query: 187 NCLFN 191
           N L N
Sbjct: 161 NQLHN 165


>gi|297805928|ref|XP_002870848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316684|gb|EFH47107.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 983

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 136/316 (43%), Gaps = 62/316 (19%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L +   +KE+P  +   + L +L L GC +L  LPS+I SL+ L+ L L GC K E L  
Sbjct: 705 LRESKHLKELP-DLSTATNLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSKLEALPT 763

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSF--RGCNGPPSSASCYLPFPINLM 124
            +  +ESL+ LD++    I+  P    +  N+K L+         PS+   + P      
Sbjct: 764 NIN-LESLDYLDLADCLLIKSFPE---ISTNIKRLNLMKTAVKEVPSTIKSWSP------ 813

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLS-DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                              L KL++S +  L E     DI     +  LY +      +P
Sbjct: 814 -------------------LRKLEMSYNDNLKEFPHALDI-----ITKLYFNDTKIQEIP 849

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
             +  +  L+ L LE CKRL ++PQL  ++ KV    C SL  L             + F
Sbjct: 850 LWVQKISRLQTLVLEGCKRLVTIPQLSDSLSKVAAINCQSLERL--DFSFHNHPEIFLWF 907

Query: 244 VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN-EGSSITVTRPS 302
           ++  KL   N  A    REF++  S+        +PG E+P    Y+   GSSI V    
Sbjct: 908 INCFKL---NNEA----REFIQTSSST----LAFLPGREVPANITYRRANGSSIMV---- 952

Query: 303 YLCNMNQVVGYAACRV 318
              N+NQ +  A+C +
Sbjct: 953 ---NLNQRL--ASCWI 963



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 34/55 (61%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLN 55
           ++ + +L  + T I+E+PL ++ +S L  L L+GCK LV +P   +SL  +  +N
Sbjct: 832 LDIITKLYFNDTKIQEIPLWVQKISRLQTLVLEGCKRLVTIPQLSDSLSKVAAIN 886


>gi|334185068|ref|NP_187072.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332640533|gb|AEE74054.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 867

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 30/204 (14%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++KE+P  +   + L +L+++ C +LV+LPS+I    +LK +NL  C     L  + G +
Sbjct: 680 NLKELP-DLSTATNLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNL 738

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +L+ELD+   +++   P+S   + N+++L F  C+                        
Sbjct: 739 TNLQELDLRECSSLVELPTSFGNLANVESLEFYECS-----------------------S 775

Query: 132 ALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
            + LPS  G L +L  L L +C      +PS  GNL +L+ L L K +  V LP+S   L
Sbjct: 776 LVKLPSTFGNLTNLRVLGLRECS-SMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNL 834

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNV 213
            NLE L L DC  L  LP    NV
Sbjct: 835 TNLENLDLRDCSSL--LPSSFGNV 856



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 36/193 (18%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E L E +  + +LE LD++ +        +    NL+ LS   C     S+   LP  
Sbjct: 656 KLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERC-----SSLVKLP-- 708

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
                           S+    +L K++L +C L    +PS  GNL +L+ L L + ++ 
Sbjct: 709 ---------------SSIGEATNLKKINLREC-LSLVELPSSFGNLTNLQELDLRECSSL 752

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG---CASLVTL--------- 227
           V LP S   L N+E L+  +C  L  LP    N+  +RV G   C+S+V L         
Sbjct: 753 VELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTN 812

Query: 228 LGALKLRKSSCTI 240
           L  L LRK S  +
Sbjct: 813 LQVLNLRKCSTLV 825



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P +   L+ L  L L+ C ++V LPS+  +L +L+ LNL  C     L  +   + +L
Sbjct: 778 KLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNLTNL 837

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
           E LD+   +    PSS   +  LK L F  C
Sbjct: 838 ENLDLRDCS-SLLPSSFGNVTYLKRLKFYKC 867


>gi|224127913|ref|XP_002329208.1| predicted protein [Populus trichocarpa]
 gi|222870989|gb|EEF08120.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 46/240 (19%)

Query: 9   LDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC---FKFENL 65
            ++T IKE+P SI  LS LV L L+ CK L  LP +I  LKS+  +++ GC    KF N+
Sbjct: 198 FNETAIKELPQSIGHLSRLVALNLRECKQLGNLPDSICLLKSIVIVDVSGCSNVTKFPNI 257

Query: 66  -----------------LETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCN 107
                              +VG +  +  LD+S    ++  PS+I+ +  L+ L+  GC+
Sbjct: 258 PGNTRYLYLSGTAVEEFPSSVGHLWRISSLDLSNCGRLKNLPSTIYELAYLEKLNLSGCS 317

Query: 108 GP-----------------------PSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
                                    PSS +C+    + L  R+     ++  S+  L SL
Sbjct: 318 SVTEFPNVSWNIKELYLDGTAIEEIPSSIACFYKL-VELHLRNCTKFEILPGSICKLKSL 376

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
            KL+LS C   +   P  +  + SL+ LYL +     LP+ I  L  L  L+L +CK L+
Sbjct: 377 QKLNLSGCSQFK-RFPGILETMESLRYLYLDRIGITNLPSPIRNLKGLCCLELGNCKYLE 435



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 75/167 (44%), Gaps = 29/167 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           ++EL LD T I+E+P SI     LV+L L+ C     LP +I  LKSL+ LNL GC +F+
Sbjct: 329 IKELYLDGTAIEEIPSSIACFYKLVELHLRNCTKFEILPGSICKLKSLQKLNLSGCSQFK 388

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
                +  +ESL  L +    I   PS I  +K L  L    C         YL      
Sbjct: 389 RFPGILETMESLRYLYLDRIGITNLPSPIRNLKGLCCLELGNCK--------YLEGKY-- 438

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                            LG L  L+LS CG+ E  +P  +G L S++
Sbjct: 439 -----------------LGDLRLLNLSGCGILE--VPKSLGCLTSIR 466



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 24/188 (12%)

Query: 44  NINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
           NI S K LK LNL GC   +   ET    E +  L+ + TAI+  P SI  +  L  L+ 
Sbjct: 166 NIKS-KYLKALNLSGCSNLKMYPETT---EHVMYLNFNETAIKELPQSIGHLSRLVALNL 221

Query: 104 RGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD--------LSDCGLG 155
           R C    +     LP  I L++      ++++  +SG  ++TK          L   G  
Sbjct: 222 RECKQLGN-----LPDSICLLK------SIVIVDVSGCSNVTKFPNIPGNTRYLYLSGTA 270

Query: 156 EGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
               PS +G+L  + +L LS       LP++I  L  LEKL L  C  +   P +  N++
Sbjct: 271 VEEFPSSVGHLWRISSLDLSNCGRLKNLPSTIYELAYLEKLNLSGCSSVTEFPNVSWNIK 330

Query: 215 KVRVNGCA 222
           ++ ++G A
Sbjct: 331 ELYLDGTA 338


>gi|105922648|gb|ABF81428.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1246

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 52/79 (65%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M CL  L LD+T I ++  SI  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 770 MNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCS 829

Query: 61  KFENLLETVGQVESLEELD 79
           + + + E +G+VESLEE D
Sbjct: 830 ELKYIPENLGKVESLEEFD 848



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 29/198 (14%)

Query: 97  NLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           NLK+L   GC       PS A       +NL+   S     +LP+   + SL    L  C
Sbjct: 701 NLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKS---IRILPNNLEMESLEVCTLDGC 757

Query: 153 GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
              E   P   GN++ L  L L +     L +SI+ L  L  L + +CK L+S+P     
Sbjct: 758 SKLE-KFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIP----- 811

Query: 213 VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
                    +S+  L    KL  S C+       LK + +N   +  L EF + +S P  
Sbjct: 812 ---------SSIGCLKSLKKLDLSGCS------ELKYIPENLGKVESLEEF-DGLSNPRT 855

Query: 273 KFSIVVPGSEIPKWFMYQ 290
           +F I VPG+EIP WF +Q
Sbjct: 856 RFGIAVPGNEIPGWFNHQ 873



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 31/171 (18%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ L+L+  T + E+  S+     L  + L  CK++  LP+N+  ++SL+   L GC K 
Sbjct: 702 LKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNL-EMESLEVCTLDGCSKL 760

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASCYLPF 119
           E   +  G +  L  L +  T I    SSI  +  L  LS   C      PSS  C    
Sbjct: 761 EKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGC---- 816

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
                                L SL KLDLS C   +  IP ++G + SL+
Sbjct: 817 ---------------------LKSLKKLDLSGCSELK-YIPENLGKVESLE 845


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 17/223 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L +  +K +P  IE L  L  L L G   L  LP  I +L++L+ LN L   
Sbjct: 18  LQKLQTLDLAQNQLKTLPKEIEKLQKLEALHL-GNNELTTLPKEIGNLQNLQELN-LNSN 75

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L E +G ++ L++L ++ + +   P  I  ++NL+ L+        S+    LP  
Sbjct: 76  QFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLN------SNQFTTLPEE 129

Query: 121 I-NLMR-RSSDLGALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I NL + ++ DL    L +L      L  L KL+L    L    +P +IG L +LK L L
Sbjct: 130 IGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQL--KTLPKEIGKLQNLKNLSL 187

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           + N   TLP  I  L NL++L L    +L +LP+   N++K++
Sbjct: 188 NGNELTTLPKEIGNLQNLQELSL-GSNQLTTLPEKIGNLQKLQ 229



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 35/220 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L  + +  +P  I  L  L +L L        LP  I +L+ L+TL+L    
Sbjct: 87  LQKLQKLSLAHSRLTTLPKEIGNLQNLQELNL-NSNQFTTLPEEIGNLQKLQTLDL-NYS 144

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G+++ L++L++    ++  P  I  ++NLK LS  G      +    LP  
Sbjct: 145 RLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNG------NELTTLPKE 198

Query: 121 INLMRRSSDL--GALMLPSL-SGLGSLTKL-DLSDCGLGEGAIPSDIG------------ 164
           I  ++   +L  G+  L +L   +G+L KL +LS  G     +P +IG            
Sbjct: 199 IGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNN 258

Query: 165 -----------NLHSLKTLYLSKNNFVTLPASINCLFNLE 193
                      NL SL++L LS N+ ++ P  I  L  L+
Sbjct: 259 NQLTTLPKEIENLQSLESLNLSGNSLISFPEEIGKLQKLK 298



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 27/180 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +K +P  I  L  L  L+L G + L  LP  I +L++L+ L+L G  
Sbjct: 156 LQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNE-LTTLPKEIGNLQNLQELSL-GSN 213

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E +G ++ L+EL ++G  ++  P  I  ++NL+ L+        ++    LP  
Sbjct: 214 QLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLN------NNQLTTLPKE 267

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L SL  L+LS   L   + P +IG L  LK LYL  N F+
Sbjct: 268 I-----------------ENLQSLESLNLSGNSLI--SFPEEIGKLQKLKWLYLGGNPFL 308



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 141 LGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
           +G+L KL   D    +   +P +I  L  L+ L+L  N   TLP  I  L NL++L L +
Sbjct: 15  IGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNL-N 73

Query: 200 CKRLQSLPQLPPNVEKVR 217
             +  +LP+   N++K++
Sbjct: 74  SNQFTTLPEEIGNLQKLQ 91



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           LDLS   L    +P +IGNL  L+TL L++N   TLP  I  L  LE L L + + L +L
Sbjct: 1   LDLSHNRLT--TLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNE-LTTL 57

Query: 207 PQLPPNVEKVR 217
           P+   N++ ++
Sbjct: 58  PKEIGNLQNLQ 68


>gi|356506553|ref|XP_003522044.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1026

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 27/300 (9%)

Query: 27  LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDIS-GTAI 85
           LV L L  C  + +L   + +L +LK + L  C    N L    +  +L+ LD+S  + +
Sbjct: 532 LVILDL-SCSRVEKLWHEVKNLVNLKNVKLRWCVLL-NELPDFSKSTNLKVLDVSCSSGL 589

Query: 86  RCPPSSIFLMKNLKTLSFRGCNGPPS-SASCYLPFPINLMRRSSDLGALMLPSLSGLGSL 144
                SIF +  L+ L   GC+     S+         L    SD   L   S++   ++
Sbjct: 590 TSVHPSIFSLHKLEKLDLSGCSSLIKFSSDDDGHLSSLLYLNLSDCEELREFSVTA-ENV 648

Query: 145 TKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ 204
            +LDL+  G+   ++P   G+L  L+ L+L +++  +LP  IN L  L  L L  C  L 
Sbjct: 649 VELDLT--GILISSLPLSFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLC 706

Query: 205 SLPQLPPNVEKVRVNGCASLVTLL---GALKLRKSSCTIIDFVDSLKLLGKNGLAISM-- 259
            LP+LPP++E +  + C SL T+L    A++  + +   ++F + LKL   + +AI +  
Sbjct: 707 ILPKLPPSLETLHADECESLETVLFPSTAVEQFEENRKRVEFWNCLKLDEFSLMAIELNA 766

Query: 260 ----LREFLEVVSAP-------SHKFSIVVPGSEIPKWFMYQNEGSSITV----TRPSYL 304
               ++   + +SAP       S++   + PGS +P+W  Y+     + +    T P++L
Sbjct: 767 QINVMKFAYQHLSAPILDHVHDSYQAVYMYPGSSVPEWLAYKTRKDYVIIDLSSTPPAHL 826


>gi|145337463|ref|NP_177427.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737528|dbj|BAF00706.1| hypothetical protein [Arabidopsis thaliana]
 gi|332197259|gb|AEE35380.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1042

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 50/282 (17%)

Query: 8   LLDKT---DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           +LD T   +++E+P  +     L +L L+ C +LV++P +IN L  L+ LN++ C    +
Sbjct: 630 ILDVTGSRNLRELP-ELSTAVNLEELILESCTSLVQIPESINRLY-LRKLNMMYC----D 683

Query: 65  LLETVGQVESLEELDISGTAIRCP----PSSIFLMKNLKTLSFRG-----CNGPPSSASC 115
            LE V  V  L+E  +S   ++      P S   + +L  L+ +G      +G   +   
Sbjct: 684 GLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLSSLTDLAIQGKIFIKLSGLSGTGD- 742

Query: 116 YLPFP-----------------------INLMRRSSDLGALMLPSLS--GLGSLTKLDLS 150
           +L F                        +++ R S  L  +    LS      LT+L L 
Sbjct: 743 HLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRFSYRLDPVNFSCLSFADFPCLTELKLI 802

Query: 151 DCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP 210
           +  + +  IP DI  L  L+TL L  N+FV LP S+  L  L+ L L +C+RL++LPQL 
Sbjct: 803 NLNIED--IPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQL- 859

Query: 211 PNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF-VDSLKLLG 251
             VE++ ++GC  L +L+G L   + +  ++DF V+  K LG
Sbjct: 860 SQVERLVLSGCVKLGSLMGILGAGRYN--LLDFCVEKCKSLG 899



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 30/227 (13%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           CL EL L   +I+++P  I  L  L  L L G  + V LP+++  L  LK L+L  C + 
Sbjct: 795 CLTELKLINLNIEDIPEDICQLQLLETLDLGG-NDFVYLPTSMGQLAMLKYLSLSNCRR- 852

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
              L+ + Q+  +E L +SG               +K  S  G  G  +     L F + 
Sbjct: 853 ---LKALPQLSQVERLVLSGC--------------VKLGSLMGILG--AGRYNLLDFCV- 892

Query: 123 LMRRSSDLGALM-----LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              +   LG+LM       S  G   L +L L +C     ++  ++ +   L  L LS  
Sbjct: 893 --EKCKSLGSLMGILSVEKSAPGRNELLELSLENCK-SLVSLSEELSHFTKLTYLDLSSL 949

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
            F  +P SI  L  +  L L +C ++ SL  LP +++ +  +GC SL
Sbjct: 950 EFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLKYLYAHGCESL 996


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L    IK +P  IE L  L  L L   + L  LP  I  L++L++L+L    
Sbjct: 162 LKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQ-LTTLPQEIGQLQNLQSLDL-STN 219

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L++L +    +   P+ I  +KNL+TL+ R  N   ++ S  +   
Sbjct: 220 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLR--NNRLTTLSKEIEQL 277

Query: 121 INLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNN 178
            NL  +S DLG+  L +    +G L  L + D G  +   +P  IG L +L+TL L  N 
Sbjct: 278 QNL--KSLDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ 335

Query: 179 FVTLPASINCLFNLEKL 195
             TLP  I  L NL++L
Sbjct: 336 LTTLPQEIGQLQNLQEL 352



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 27/201 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L    IK +P  IE L  L  L L   + L  LP  I  L+ L+ L  L   
Sbjct: 93  LKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQ-LTTLPQEIGQLQKLQWL-YLPKN 150

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+ L++S   I+  P  I  ++ L++L      G  ++    LP  
Sbjct: 151 QLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSL------GLDNNQLTTLP-- 202

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   ++G L         +L  LDLS   L    +P +IG+L +L+ LYL  N   
Sbjct: 203 -------QEIGQLQ--------NLQSLDLSTNRLT--TLPQEIGHLQNLQDLYLVSNQLT 245

Query: 181 TLPASINCLFNLEKLKLEDCK 201
            LP  I  L NL+ L L + +
Sbjct: 246 ILPNEIGQLKNLQTLNLRNNR 266



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 37/162 (22%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L   +F+ L + +G++++L+EL+++   +   P  I  +KNL+ L+         SA+  
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNL--------SANQI 106

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              P   + +   L +L LP+      LT             +P +IG L  L+ LYL K
Sbjct: 107 KTIPKE-IEKLQKLQSLYLPN----NQLT------------TLPQEIGQLQKLQWLYLPK 149

Query: 177 NNFVTLPASINCLFNLEKL------------KLEDCKRLQSL 206
           N   TLP  I  L NL+ L            K+E  ++LQSL
Sbjct: 150 NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSL 191



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 40/187 (21%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I  LK+L+ LNL    +   L + +GQ+++L +L++S   I+  P  I  ++ L++
Sbjct: 63  LPKEIGKLKNLQELNL-NKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQS 121

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP---------SLSGLGSLTKLDLS- 150
           L        P++    LP  I  +++   L  L LP          +  L +L  L+LS 
Sbjct: 122 LYL------PNNQLTTLPQEIGQLQK---LQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 151 -----------------DCGLGEG---AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
                              GL       +P +IG L +L++L LS N   TLP  I  L 
Sbjct: 173 NQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232

Query: 191 NLEKLKL 197
           NL+ L L
Sbjct: 233 NLQDLYL 239


>gi|421090275|ref|ZP_15551070.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000956|gb|EKO51581.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 1615

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 17/218 (7%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ CK L  +P +I +LK L  L+ L   K   L 
Sbjct: 1225 LNLSGTKFERFPISVTKFQNLTSLSLRDCK-LSEIPESIGNLKRLIDLH-LSSNKLTTLP 1282

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L EL I   +    P ++  +KNLK LS R       +    LP  I  +  
Sbjct: 1283 ASLGTLEQLVELYIDTNSFTTIPDAVLSLKNLKNLSVRW------NQISTLPNEIENLTS 1336

Query: 127  SSDLG--ALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              DL   A  L SL      L SLT++ LS     E   P  I  L +LK L + +N   
Sbjct: 1337 LEDLNLHANQLSSLPTTIQNLSSLTRIGLSKNQFSE--FPEPILYLKNLKYLNIEENRIP 1394

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
             LP +I  L NL+ L + +   ++SLPQ   N+ ++  
Sbjct: 1395 KLPETIRNLSNLKSLNISET-WIESLPQSIENLTQLET 1431



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 114/279 (40%), Gaps = 65/279 (23%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLK-------SLKTLNLL-GCFKFE 63
            T I+E+    +  + L +LT+ G      L S + +LK       +LK LN+L  C   E
Sbjct: 1141 TSIQEL----KFFTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNVLNSCINLE 1196

Query: 64   NLL--------------ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP 109
             +               E + + ++   L++SGT     P S+   +NL +LS R C   
Sbjct: 1197 KVELRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTKFQNLTSLSLRDC--- 1253

Query: 110  PSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSL 169
                            + S++      S+  L  L  L LS   L    +P+ +G L  L
Sbjct: 1254 ----------------KLSEIPE----SIGNLKRLIDLHLSSNKL--TTLPASLGTLEQL 1291

Query: 170  KTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL-L 228
              LY+  N+F T+P ++  L NL+ L +    R   +  LP  +E        SL  L L
Sbjct: 1292 VELYIDTNSFTTIPDAVLSLKNLKNLSV----RWNQISTLPNEIE-----NLTSLEDLNL 1342

Query: 229  GALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVV 267
             A +L     TI     +L  L + GL+ +   EF E +
Sbjct: 1343 HANQLSSLPTTI----QNLSSLTRIGLSKNQFSEFPEPI 1377


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 20/222 (9%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           + L++L L    +K +P  I  L  L  L L    NL+ LP  I+ L++LK LNL G  +
Sbjct: 70  QNLKQLDLSDNQLKVLPKEIGQLQNLQVLNL-SANNLINLPKEIDQLQNLKRLNLSGN-R 127

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
              L + +GQ++ LE L +S   +   P  I  ++NLK L   G      ++   LP  I
Sbjct: 128 LTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYG------NSLTTLPEEI 181

Query: 122 NLMRRSS-----DLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
             +++       D     LP  L  L +L ++ L    L   ++P +IG L  L TLYL 
Sbjct: 182 GQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLT--SLPQEIGQLGKLWTLYLY 239

Query: 176 KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            N   TLP  I  L NL +L L    +L +L  LP  + +++
Sbjct: 240 SNELTTLPEEIGQLQNLRQLNL----KLNNLTTLPKEIGQLQ 277



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 88/203 (43%), Gaps = 32/203 (15%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LP  I  L++LK L L G      L E +GQ++  E L +    +   P  +  ++N
Sbjct: 151 LTVLPKEIGQLQNLKELLLYGN-SLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQN 209

Query: 98  LKTLSF---RGCNGPP--------------SSASCYLPFPI----NLMRRSSDLGALM-L 135
           L+ +     R  + P               S+    LP  I    NL + +  L  L  L
Sbjct: 210 LEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTL 269

Query: 136 PSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEK 194
           P   G L  L  LDLSD  L   +IP +IG L +L+ L LS N  V LP  I  L NL  
Sbjct: 270 PKEIGQLQKLDNLDLSDNQLT--SIPKEIGQLQNLRWLDLSGNPLVILPKEIGQLKNLYF 327

Query: 195 LKLEDCKRLQSLPQLPPNVEKVR 217
           L ++       +P L P  EK+R
Sbjct: 328 LAMK------GIPDLIPQKEKIR 344



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 23/150 (15%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           + + ++L++LD+S   ++  P  I  ++NL+ L+    N             INL +   
Sbjct: 66  IEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANN------------LINLPKEID 113

Query: 129 DLGALMLPSLSG---------LGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNN 178
            L  L   +LSG         +G L KL+           +P +IG L +LK L L  N+
Sbjct: 114 QLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNS 173

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             TLP  I  L   E+L L D  +L +LPQ
Sbjct: 174 LTTLPEEIGQLQKFERLYLHD-NQLTTLPQ 202


>gi|308171398|gb|ADO15993.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171402|gb|ADO15995.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171404|gb|ADO15996.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171406|gb|ADO15997.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 118/295 (40%), Gaps = 56/295 (18%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ +L 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRQLC 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--INLMRRSSDLGALMLPS 137
           +S ++I   P   F  +NL  L  RG      S       P  I LM   + + AL L  
Sbjct: 734 LSESSITELP---FSFQNLAGL--RGLELLFLSPHTIFKVPSSIVLMPELTVIRALGLKG 788

Query: 138 LSGL---------GSLTK-----LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
              L         GS+       L +S C L +     D      +K L LSKNNF  LP
Sbjct: 789 WQWLKQEEGEEKTGSIVSSMVEMLTVSSCNLCDEFFSIDFTWFAHMKELCLSKNNFTILP 848

Query: 184 ASIN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
             I  C F L KL +  CK L+ +  +PPN++      C SL +                
Sbjct: 849 ECIKECQF-LRKLDVCGCKHLREIRGIPPNLKHFFAINCKSLTS---------------- 891

Query: 243 FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                          S +R+FL      +      +PG  IP+WF  Q+ G SI+
Sbjct: 892 ---------------SSIRKFLNQELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS 931


>gi|390981249|pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
           Iii Effector Xcv3220 (Xopl)
          Length = 328

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 102/224 (45%), Gaps = 41/224 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+   +D   + E+P + +  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 106 LQHXTIDAAGLXELPDTXQQFAGLETLTL--ARNPLRALPASIASLNRLRELSIRACPEL 163

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T IR  P+SI  ++NLK+L  R  N P S+ 
Sbjct: 164 TELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIR--NSPLSA- 220

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                           LG    P++  L  L +LDL  C       P   G    LK L 
Sbjct: 221 ----------------LG----PAIHHLPKLEELDLRGCTALRN-YPPIFGGRAPLKRLI 259

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP----QLPPN 212
           L   +N +TLP  I+ L  LEKL L  C  L  LP    QLP N
Sbjct: 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303


>gi|356506534|ref|XP_003522035.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1035

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 156/390 (40%), Gaps = 85/390 (21%)

Query: 40  RLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
           +L   + +L +LK + L  C +F   L    +  +LE L++S   +    SSIF +K L+
Sbjct: 618 KLWDGMQNLVNLKEVRLYRC-QFMEELPDFTKATNLEVLNLSHCGLSSVHSSIFSLKKLE 676

Query: 100 TLSFRGCNGPPSSASCYLPFPINLMRRSSD------LGALMLPSLSGLGSLT-----KLD 148
            L    C               NL R +SD      L  L L    GL  L+      ++
Sbjct: 677 KLEITYC--------------FNLTRLTSDHIHLSSLRYLNLELCHGLKELSVTSENMIE 722

Query: 149 LSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           L+  G  G   +PS  G    L+ L +  +   +LP+SI     L  L L  C  LQ++P
Sbjct: 723 LNMRGSFGLKVLPSSFGRQSKLEILVIYFSTIQSLPSSIKDCTRLRCLDLRHCDFLQTIP 782

Query: 208 QLPPNVEKVRVNGCASLVTLL---GALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFL 264
           +LPP++E +  N C  L T+L    A++  K +   I+F + L  L K+ L    L   +
Sbjct: 783 ELPPSLETLLANECRYLRTVLFPSTAVEQLKENRKKIEFWNCL-CLDKHSLTAIELNVQI 841

Query: 265 EVVS-------AP------------------------SHKFSIVVPGSEIPKWFMYQNEG 293
            V+        AP                        S++ +   PGS  PKW  Y+   
Sbjct: 842 NVMKFACQHFPAPELDFDDYNDYVVIHDLQSGYEECDSYQATYAYPGSTFPKWLEYKTTN 901

Query: 294 SSITVTRPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFYRYPHPAHVLHCSMDEKFGHRG 353
             + +   S    ++  +G+  C  F VPK S    +   Y      +  S  E  G +G
Sbjct: 902 DYVVIDLSS--GQLSHQLGFIFC--FIVPKDSKRDDKLILY------ITISDCEGEGEKG 951

Query: 354 -------------SDHLWLLYLPRQSYYCN 370
                        SDH+ ++Y  R S+Y N
Sbjct: 952 STKMYMNKSDSTKSDHVCVMYDQRCSHYLN 981


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQNNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
             LP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TILPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 28/208 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LREL L       +P  I  L  L  L L G   L ++PS I  L++L+ LNL    + E
Sbjct: 378 LRELYLYDCGFSTLPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNL-EANELE 435

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--- 120
            L + +GQ+ +L+ L +    ++  P+ I  +K L+ L          S + +  FP   
Sbjct: 436 RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEI 487

Query: 121 --------INLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   +NL R   ++L A     +  L +L +LDL+D       +P +IG L  L+T
Sbjct: 488 GKLENLQTLNLQRNQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQT 541

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLED 199
           L L  N   TLP  I  L NL+ L L++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQN 569



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    + +   +GQ+ +LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K++P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE-LERLPKEIGQLRNLQRLSLHQNT 456

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 457 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 505

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 563

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 564 WLYLQNNQF 572



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 34/213 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQNN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++    LP  
Sbjct: 197 QFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVLPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------AFPKEMGQLKNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL 206
            LP  I  L NL+ L+       L++ KR+Q L
Sbjct: 292 VLPKEIGQLQNLQDLELLMNPLSLKERKRIQKL 324



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|168005435|ref|XP_001755416.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693544|gb|EDQ79896.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 624

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 25/191 (13%)

Query: 30  LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA-IRCP 88
           L++KGC  L  LP  +N+LKSL T ++ GC    +L + +G + +L  L +SG A +   
Sbjct: 4   LSIKGCDRLTSLPKELNNLKSLTTFDISGCMNLTSLPKELGNLTTLTSLYMSGCANLTSL 63

Query: 89  PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLD 148
           P  +  + +L T     C               NL     +LG         L SLTK +
Sbjct: 64  PKELGNLTSLTTFDIERCE--------------NLTSLPKELG--------NLTSLTKFN 101

Query: 149 LSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           +S C     ++P ++GNL +L  LY+S   N  +LP  +  L  L  L +  C+ L SLP
Sbjct: 102 MSRCK-NLTSLPKELGNLTTLTVLYMSGCENLTSLPKELGNLTTLTSLYISGCENLTSLP 160

Query: 208 QLPPNVEKVRV 218
           +   N+  + +
Sbjct: 161 KELGNLTSLTI 171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 28/220 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++  +P  +  L+ L +  +  CKNL  LP  + +L +L  L + GC    +L + +G +
Sbjct: 83  NLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELGNLTTLTVLYMSGCENLTSLPKELGNL 142

Query: 73  ESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            +L  L ISG   +   P  +    NL +L+             Y+ +  NL     +LG
Sbjct: 143 TTLTSLYISGCENLTSLPKEL---GNLTSLTIF-----------YMSYCKNLTSLPKELG 188

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
                    L SLT  ++S C     ++P ++GNL SL   Y+S   N  +LP  +  L 
Sbjct: 189 --------NLTSLTSFNMSYCK-NMTSLPKELGNLTSLTIFYMSYCKNLTSLPKGLGNLT 239

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
           +L    +  CK + SLP+   N+  +    +N C +L +L
Sbjct: 240 SLTSFNMSYCKNMTSLPKELGNLTSLTTFYMNRCKNLTSL 279



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 25/210 (11%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++  +P  ++ ++ L  L + GC NL  LP  + +L SL +L + GC    +L + +G +
Sbjct: 371 NLTSLPKELDNITSLTLLCMSGCANLTSLPKELGNLTSLISLYMSGCANLTSLPKELGNL 430

Query: 73  ESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            SL+  D+S    +   P  +  + +L +L    C    S     LP      +   +L 
Sbjct: 431 TSLKIFDMSWCENLTSLPKELGNLTSLTSLYMSRCANLTS-----LP------KELGNLT 479

Query: 132 ALMLPSLSG----------LGSLTKLDLSDCGLGEG--AIPSDIGNLHSLKTLYLSK-NN 178
           +L+   +SG          LG+LT L + D    E   ++P ++GNL +L +LY+S   N
Sbjct: 480 SLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTTLTSLYMSGCVN 539

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
              LP  ++ L +L    +E C+ L SLP+
Sbjct: 540 LTLLPKELSNLTSLTTFDIERCENLTSLPK 569



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 18/227 (7%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++  +P  +  L+ L    +  CKNL  LP  + +L SL + ++ GC    +L + +G +
Sbjct: 251 NMTSLPKELGNLTSLTTFYMNRCKNLTSLPKELVNLTSLTSFHISGCENLTSLPKELGNL 310

Query: 73  ESLEELDISGTAIRCP-----PSSIFLMKNLKTLSFRGC---NGPPSSASCYLPFPINLM 124
            SL   DI     RC      P  +  + +L   +   C      P             +
Sbjct: 311 TSLTTFDIE----RCENLTSLPKELGNLTSLTIFNMSRCKNLTSLPEELGNLTSLTKFYI 366

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLP 183
            R  +L +L    L  + SLT L +S C     ++P ++GNL SL +LY+S   N  +LP
Sbjct: 367 ERCENLTSLP-KELDNITSLTLLCMSGCA-NLTSLPKELGNLTSLISLYMSGCANLTSLP 424

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
             +  L +L+   +  C+ L SLP+   N+  +    ++ CA+L +L
Sbjct: 425 KELGNLTSLKIFDMSWCENLTSLPKELGNLTSLTSLYMSRCANLTSL 471



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++  +P  +  L+ L    +  CKN+  LP  + +L SL T  +  C    +L + +  +
Sbjct: 227 NLTSLPKGLGNLTSLTSFNMSYCKNMTSLPKELGNLTSLTTFYMNRCKNLTSLPKELVNL 286

Query: 73  ESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            SL    ISG   +   P  +  + +L T     C               NL     +LG
Sbjct: 287 TSLTSFHISGCENLTSLPKELGNLTSLTTFDIERCE--------------NLTSLPKELG 332

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
                    L SLT  ++S C     ++P ++GNL SL   Y+ +  N  +LP  ++ + 
Sbjct: 333 --------NLTSLTIFNMSRCK-NLTSLPEELGNLTSLTKFYIERCENLTSLPKELDNIT 383

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVE---KVRVNGCASLVTL 227
           +L  L +  C  L SLP+   N+     + ++GCA+L +L
Sbjct: 384 SLTLLCMSGCANLTSLPKELGNLTSLISLYMSGCANLTSL 423


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 16/223 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L +    +  +P  I  L  L QL ++  + L  LP  I+ LK+LK L++    
Sbjct: 61  LKNLKQLDISYNQLTSLPPDISKLKNLTQLNIRNNQ-LTSLPPGISKLKNLKQLDI-SEN 118

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF---RGCNGPPSSASCYL 117
           +  +L   + +++ L +L IS   +   P  I  +KNLK LS    +  + PP       
Sbjct: 119 QLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKS 178

Query: 118 PFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              IN+           LP  +S L SLT+L +S   L   ++PS+I NL SL  L +S+
Sbjct: 179 LTQINIYENQ----LTSLPHEISELKSLTQLSISGNQLT--SLPSEIANLESLTQLDISR 232

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVN 219
           N   +LP  I  L NL +L +   K    L  LPP + K+ ++
Sbjct: 233 NQLTSLPLEITELKNLTQLDISSNK----LTSLPPEILKLGID 271



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 30/178 (16%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           KNL  LP  I+ LK+   L  +   +  +L   + ++++L++LDIS   +   P  I  +
Sbjct: 26  KNLTSLPPEISELKNFTKL-YISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKL 84

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
           KNL  L+ R      ++    LP                 P +S L +L +LD+S+  L 
Sbjct: 85  KNLTQLNIR------NNQLTSLP-----------------PGISKLKNLKQLDISENQL- 120

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
             ++PS I  L  L  L +SKN   +LP  I+ L NL++L +   +    L  LPP +
Sbjct: 121 -TSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQ----LTSLPPEI 173


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 31/226 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L+L+ T IK +P SI  L  L  L L  C+ L  LP  +  L++L+ LNL    
Sbjct: 104 LQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQ-LQELPEELGQLQNLEALNL-SAN 161

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL-------SFRGCNGPPSSA 113
           + E L  ++GQ+++L+  D+S   ++  P+    +  L+ L       SF   N     A
Sbjct: 162 QLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQLQA 221

Query: 114 SCYLPFPINLMRR-----------------SSDLGALMLPSLSG-LGSLTKLDLSDCGLG 155
              L    N + +                  +DLG   +P+  G L SL +LDLSD  + 
Sbjct: 222 LKTLQLSENQLDQLPASLGQLKQLELLELQDNDLG--QIPAQIGQLQSLVELDLSDNFIQ 279

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           +  +P +IG L +LK+L++++N    LP     L NL++L+L++ K
Sbjct: 280 Q--LPPEIGQLQALKSLFITENELSQLPPEFAQLKNLQELQLQENK 323



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 17/176 (9%)

Query: 18  PLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEE 77
           P  I   S L  L+L G + L  LP  I  L++L+ L +L     + L  ++GQ+++L+ 
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVL-ILNSTGIKRLPASIGQLQNLQI 132

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSSDLGALM 134
           LD+    ++  P  +  ++NL+ L+         PPS              + +DL +  
Sbjct: 133 LDLGNCQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQ-------ALKMADLSSNR 185

Query: 135 LPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
           L  L    S L  L +L L++  L    +PS+ G L +LKTL LS+N    LPAS+
Sbjct: 186 LQELPNEFSQLTQLEELALANNLL--SFLPSNFGQLQALKTLQLSENQLDQLPASL 239



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 90/220 (40%), Gaps = 50/220 (22%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNL--- 56
           ++ L+   L    ++E+P     L+ L +L L    NL+  LPSN   L++LKTL L   
Sbjct: 173 LQALKMADLSSNRLQELPNEFSQLTQLEELAL--ANNLLSFLPSNFGQLQALKTLQLSEN 230

Query: 57  --------LGCF-----------KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
                   LG                 +   +GQ++SL ELD+S   I+  P  I  ++ 
Sbjct: 231 QLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQA 290

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           LK+L          +    LP                 P  + L +L +L L +  L   
Sbjct: 291 LKSLFIT------ENELSQLP-----------------PEFAQLKNLQELQLQENKLI-- 325

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           A+P + G L  L+ L LS+N    LP SI  L  L  L L
Sbjct: 326 ALPINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNL 365


>gi|255074191|ref|XP_002500770.1| predicted protein [Micromonas sp. RCC299]
 gi|226516033|gb|ACO62028.1| predicted protein [Micromonas sp. RCC299]
          Length = 256

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 31/221 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  LR L L    +  +P+ I  L+ L  L L G   L R+P+ +  L SL+ L  LG  
Sbjct: 55  LTSLRALSLSSNKLTSVPVEIGQLTSLTALFL-GDNLLTRVPAEVGQLASLEGL-FLGDN 112

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  ++L  +GQ+ SL EL +    +   P+ I               G  +S +  L + 
Sbjct: 113 RLTSVLAEIGQLTSLTELSLGNNQLTSLPAEI---------------GRLTSLTALLLYD 157

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
             L    +++G L         SL KL L++  L   ++P++IG L SL  LYL  N   
Sbjct: 158 NQLTSVPAEIGQLT--------SLVKLSLTENQLT--SLPAEIGQLTSLTELYLYGNQLT 207

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGC 221
           ++PA I  L +L +L L D +    L  +P  + ++R  GC
Sbjct: 208 SVPAEIGQLTSLVRLYLGDNR----LTSVPAAIRELRAAGC 244


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQNNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
             LP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TILPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 28/208 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LREL L       +P  I  L  L  L L G   L ++PS I  L++L+ LNL    + E
Sbjct: 378 LRELYLYDCGFSTLPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNL-EANELE 435

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--- 120
            L + +GQ+ +L+ L +    ++  P+ I  +K L+ L          S + +  FP   
Sbjct: 436 RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEI 487

Query: 121 --------INLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   +NL R   ++L A     +  L +L +LDL+D       +P +IG L  L+T
Sbjct: 488 GKLENLQTLNLQRNQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQT 541

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLED 199
           L L  N   TLP  I  L NL+ L L++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQN 569



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    + +   +GQ+ +LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQNN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++    LP  
Sbjct: 197 QFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVLPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQTLCSPE----NRLT------------ALPKEMGQLKNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL 206
            LP  I  L NL+ L+       L++ KR+Q L
Sbjct: 292 VLPKEIGQLQNLQDLELLMNPLSLKERKRIQKL 324



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K++P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE-LERLPKEIGQLRNLQRLSLHQNT 456

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 457 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 505

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 563

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 564 WLYLQNNQF 572



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 100/204 (49%), Gaps = 23/204 (11%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL        L + +
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTVLPKEIGQLKNLQELNLKWNL-LTVLPKEI 90

Query: 70  GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
           GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++   D
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQNLQD 144

Query: 130 LGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           LG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F TLP
Sbjct: 145 LGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQDNQFTTLP 202

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
             I  L NL+ L L+D  +L +LP
Sbjct: 203 KEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 28/195 (14%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L  L L G   L  +PS I  LK+L+ LNL    + E L + +GQ+ +L+
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNL-EANELERLPKEIGQLRNLQ 448

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-----------INLMR 125
           +L +    ++  P+ I  +K L+ L          S + +  FP           +NL R
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEIGKLENLQTLNLQR 500

Query: 126 RS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              ++L A     +  L +L +LDL+D       +P +IG L  L+TL L  N   TLP 
Sbjct: 501 NQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQTLDLRNNQLTTLPT 554

Query: 185 SINCLFNLEKLKLED 199
            I  L NL+ L L++
Sbjct: 555 EIGQLQNLQWLYLQN 569



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    +N+   +GQ+++LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K +P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE-LERLPKEIGQLRNLQKLSLHQNT 456

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 457 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 505

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 563

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 564 WLYLQNNQF 572



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 35/229 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQDN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++     P  
Sbjct: 197 QFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVFPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLQNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL-PQLPPNVEKVRVNGC 221
             P  I  L NL+ L+       L++ KR+Q L P    ++ +V  NG 
Sbjct: 292 VFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGV 340



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTVLPKEIGQLKNLQELNLKW------NLLTVLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQNNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
             LP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TILPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 28/208 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LREL L       +P  I  L  L  L L G   L ++PS I  L++L+ LNL    + E
Sbjct: 378 LRELYLYDCGFSTLPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNL-EANELE 435

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--- 120
            L + +GQ+ +L+ L +    ++  P+ I  +K L+ L          S + +  FP   
Sbjct: 436 RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEI 487

Query: 121 --------INLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   +NL R   ++L A     +  L +L +LDL+D       +P +IG L  L+T
Sbjct: 488 GKLENLQTLNLQRNQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQT 541

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLED 199
           L L  N   TLP  I  L NL+ L L++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQN 569



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    + +   +GQ+ +LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQNN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++    LP  
Sbjct: 197 QFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVLPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQTLCSPE----NRLT------------ALPKEMGQLKNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL 206
            LP  I  L NL+ L+       L++ KR+Q L
Sbjct: 292 VLPKEIGQLQNLQDLELLMNPLSLKERKRIQKL 324



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K++P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE-LERLPKEIGQLRNLQRLSLHQNT 456

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 457 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 505

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 563

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 564 WLYLQNNQF 572



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|145332743|ref|NP_001078237.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145339123|ref|NP_190053.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644407|gb|AEE77928.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644408|gb|AEE77929.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 39/237 (16%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL L D + + E+P SIE L+ L +L L+ C +LV LPS  N+ K L+ L L  C   
Sbjct: 741 LEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATK-LEELYLENCSSL 799

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E L  ++    +L++L +   +      +I    NL+ L    C     S+   LP  I 
Sbjct: 800 EKLPPSIN-ANNLQQLSLINCSRVVELPAIENATNLQKLDLGNC-----SSLIELPLSIG 853

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
                 +L      ++SG  SL KL            PS IG++ +LK   LS  +N V 
Sbjct: 854 TATNLKEL------NISGCSSLVKL------------PSSIGDITNLKEFDLSNCSNLVE 895

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNV-----------EKVRVNGCASLVTL 227
           LP +IN  F L+ L L  C +L+S P++   +             +R+N C +LV+L
Sbjct: 896 LPININLKF-LDTLNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSL 951



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L++ + + E+P +IE  + L +L L  C +L+ LP +I +  +LK LN+ GC     L  
Sbjct: 816 LINCSRVVELP-AIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPS 874

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
           ++G + +L+E D+S  +          +K L TL+  GC+   S          +  +R 
Sbjct: 875 SIGDITNLKEFDLSNCSNLVELPININLKFLDTLNLAGCSQLKSFPEISTKIFTDCYQRM 934

Query: 128 SDLGALMLPSLSGLGSLTKL 147
           S L  L + + + L SL +L
Sbjct: 935 SRLRDLRINNCNNLVSLPQL 954



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 11/99 (11%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           LP+LS   +L +L L DC      +PS I  L SL+ LYL + ++ V LP+  N    LE
Sbjct: 732 LPNLSTATNLEELKLRDCS-SLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNAT-KLE 789

Query: 194 KLKLEDCKRLQSLPQLPP-----NVEKVRVNGCASLVTL 227
           +L LE+C    SL +LPP     N++++ +  C+ +V L
Sbjct: 790 ELYLENC---SSLEKLPPSINANNLQQLSLINCSRVVEL 825


>gi|421116962|ref|ZP_15577334.1| leucine rich repeat protein [Leptospira interrogans serovar Canicola
            str. Fiocruz LV133]
 gi|410011461|gb|EKO69580.1| leucine rich repeat protein [Leptospira interrogans serovar Canicola
            str. Fiocruz LV133]
          Length = 1616

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ CK L  +P +I +LK L  L+L    +   L 
Sbjct: 1226 LNLSGTKFERFPISVTRFQNLTSLSLRDCK-LSEVPESIGNLKRLIDLHL-NSNQLTTLP 1283

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L EL I   +    P ++  +KNLKT   R       +    LP  I  +  
Sbjct: 1284 ASLGTLEQLTELYIDTNSFTTIPDAVLSLKNLKTFWARW------NQISTLPNEIGNLTS 1337

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSD------------------CGLGEGAI--- 159
              DL       + +  ++  L SLTK+ LS                     +GE  I   
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK+L + +    +LP SI  L  LE + L   K  + LP    N+E ++
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAK-FRDLPDFLANMESLK 1454



 Score = 49.3 bits (116), Expect = 0.004,   Method: Composition-based stats.
 Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 37/199 (18%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC-FKFENLLETVG 70
            T I+E+    +  + L +LT+ G    V   S ++ LK+LK + L     K  N+L +  
Sbjct: 1142 TSIQEL----KFFTKLEELTINGP---VTDSSLLSELKNLKKIELDDWNLKDLNVLNSCI 1194

Query: 71   QVESLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
             +E +E  +I G  T   C   S  L ++  T+          S + +  FPI++ R   
Sbjct: 1195 NLEEIELRNIKGFETDFDC---SELLNESKATIHLN------LSGTKFERFPISVTR--- 1242

Query: 129  DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                          +LT L L DC L E  +P  IGNL  L  L+L+ N   TLPAS+  
Sbjct: 1243 ------------FQNLTSLSLRDCKLSE--VPESIGNLKRLIDLHLNSNQLTTLPASLGT 1288

Query: 189  LFNLEKLKLEDCKRLQSLP 207
            L  L +L + D     ++P
Sbjct: 1289 LEQLTELYI-DTNSFTTIP 1306


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQNNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
             LP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TILPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 28/208 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LREL L       +P  I  L  L  L L G   L ++PS I  L++L+ LNL    + E
Sbjct: 378 LRELYLYDCGFSTLPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNL-EANELE 435

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--- 120
            L + +GQ+ +L+ L +    ++  P+ I  +K L+ L          S + +  FP   
Sbjct: 436 RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEI 487

Query: 121 --------INLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   +NL R   ++L A     +  L +L +LDL+D       +P +IG L  L+T
Sbjct: 488 GKLENLQTLNLQRNQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQT 541

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLED 199
           L L  N   TLP  I  L NL+ L L++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQN 569



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    + +   +GQ+ +LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQNN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++    LP  
Sbjct: 197 QFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVLPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLKNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL 206
            LP  I  L NL+ L+       L++ KR+Q L
Sbjct: 292 VLPKEIGQLQNLQDLELLMNPLSLKERKRIQKL 324



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K++P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE-LERLPKEIGQLRNLQRLSLHQNT 456

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 457 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 505

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 563

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 564 WLYLQNNQF 572



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|108738474|gb|ABG00770.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526


>gi|77748695|ref|NP_643399.2| leucin rich protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 493

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 37/217 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 93  LQHMTIDAAGLMELPDTMQQFAGLETLTL--ARNPLRALPASIASLSRLRELSIRACPEL 150

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T I   P+SI  ++NLK+L  R  N P S+ 
Sbjct: 151 TELPEHLASTDASGEHQGLVNLQSLRLERTGITSLPASIANLQNLKSLKIR--NSPLSA- 207

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                           LG    P++  L  L +LDL  C     + P   G    LK L 
Sbjct: 208 ----------------LG----PAIHQLPKLEELDLRGCT-ALRSYPPIFGGSAPLKRLI 246

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           L   +N +TLP  I+ L  LEKL L  C  L  LP L
Sbjct: 247 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 283


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 34  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 81

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 82  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 135

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 136 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQNNQF 193

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
             LP  I  L NL+ L L+D  +L +LP
Sbjct: 194 TILPKEIGQLQNLQTLNLQD-NQLATLP 220



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 28/208 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LREL L       +P  I  L  L  L L G   L ++PS I  L++L+ LNL    + E
Sbjct: 373 LRELYLYDCGFSTLPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNL-EANELE 430

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--- 120
            L + +GQ+ +L+ L +    ++  P+ I  +K L+ L          S + +  FP   
Sbjct: 431 RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEI 482

Query: 121 --------INLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   +NL R   ++L A     +  L +L +LDL+D       +P +IG L  L+T
Sbjct: 483 GKLENLQTLNLQRNQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQT 536

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLED 199
           L L  N   TLP  I  L NL+ L L++
Sbjct: 537 LDLRNNQLTTLPTEIGQLQNLQWLYLQN 564



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    + +   +GQ+ +LE L++    +   P  I  ++NL+ 
Sbjct: 386 LPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 444

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 445 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 479

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 480 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 537

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 538 ------DLRNNQLTTLPTEIGQLQ 555



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 134 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQNN- 191

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++    LP  
Sbjct: 192 QFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVLPKE 245

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 246 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLKNLQTLNLVNNRLT 286

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL 206
            LP  I  L NL+ L+       L++ KR+Q L
Sbjct: 287 VLPKEIGQLQNLQDLELLMNPLSLKERKRIQKL 319



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K++P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 393 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE-LERLPKEIGQLRNLQRLSLHQNT 451

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 452 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 500

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 501 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 558

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 559 WLYLQNNQF 567



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 48  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 101

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 102 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 159

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 160 LQKLWLSE-NRLTALPK 175


>gi|418666516|ref|ZP_13227938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|421125277|ref|ZP_15585530.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421137350|ref|ZP_15597437.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018564|gb|EKO85402.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410437184|gb|EKP86287.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410757754|gb|EKR19362.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 349

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 5/206 (2%)

Query: 3   CLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
            +R L+LD  D+K     I  L  L +L   G KNL   P  I  L++LK LNL G  + 
Sbjct: 20  LVRTLVLDSFDLKSFTEEIVKLQNLERLIFNG-KNLKIFPKTITKLRNLKELNL-GRNQI 77

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +L E +G++++L+ELD+S   +   P  I  +KNL+ L+              LP  + 
Sbjct: 78  SSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLK 137

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           ++  S +        +  L +L  LD S+  L E  +P  +G L +L  LYL  N    L
Sbjct: 138 ILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKE--LPEKLGQLQNLNILYLLGNELKVL 195

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ 208
           P+S +   +L+ L L +  R Q  P+
Sbjct: 196 PSSFSEFRSLKSLNL-NYNRFQVFPK 220



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           +  L+EL L +  I  +P  I  L  L +L L   + L  LP  I +LK+L+ L L    
Sbjct: 64  LRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQ-LTSLPVEIGNLKNLEILTLYRNR 122

Query: 57  ------------------LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNL 98
                             L   KF    + + Q+++LE LD S   ++  P  +  ++NL
Sbjct: 123 ISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNL 182

Query: 99  KTL---------------SFRGCNGPPSSASCYLPFPINL--------MRRSSDLGALML 135
             L                FR       + + +  FP  L        +  + +    + 
Sbjct: 183 NILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLP 242

Query: 136 PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
             +  L +L  L L    L +  +P +IG L +L++LYL +N   TLP  I  L NL++L
Sbjct: 243 EEIGNLSNLNSLFLEANRLKQ--LPQNIGKLQNLESLYLQENQLTTLPEEIGSLQNLKEL 300

Query: 196 KLE 198
            L+
Sbjct: 301 YLQ 303



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 8/79 (10%)

Query: 143 SLTKL-DLSDCGLGEGAI---PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           ++TKL +L +  LG   I   P +IG L +LK L LS N   +LP  I  L NLE L L 
Sbjct: 60  TITKLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLY 119

Query: 199 DCKRLQSLPQ---LPPNVE 214
              R+  LP+   LP N++
Sbjct: 120 R-NRISVLPKDFSLPQNLK 137


>gi|358248732|ref|NP_001239675.1| TMV resistance protein N-like [Glycine max]
 gi|295083323|gb|ADF78115.1| rj2 protein [Glycine max]
 gi|295083325|gb|ADF78116.1| rj2 protein [Glycine max]
 gi|295083327|gb|ADF78117.1| rj2 protein [Glycine max]
 gi|308171400|gb|ADO15994.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1051

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 122/293 (41%), Gaps = 52/293 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ EL 
Sbjct: 675 SIGFLDKLKTLNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRELC 732

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +S ++I       F  +NL  L     +     A   +P  I LM   +++  + L    
Sbjct: 733 LSNSSI---TELSFSFQNLAGLQALDLSFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQ 789

Query: 140 GL---------GSLT-----KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            L         GS+      +L ++ C L +     D      +K L LS+NNF  LP  
Sbjct: 790 WLKQEEGEEKTGSIVSSKVVRLTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPEC 849

Query: 186 IN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
           I  C F L  L + DCK L+ +  +PPN++      C SL           +S +I  F+
Sbjct: 850 IKECQF-LRILDVCDCKHLREIRGIPPNLKHFFAINCKSL-----------TSSSISKFL 897

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
           +                   E+  A +  F +  PG  IP+WF  Q+ G SI+
Sbjct: 898 NQ------------------ELHEAGNTVFCL--PGKRIPEWFDQQSRGPSIS 930


>gi|110741708|dbj|BAE98800.1| hypothetical protein [Arabidopsis thaliana]
          Length = 574

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 33/306 (10%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL++  + ++ +    + L  L ++ LKG  NL  LP N+++   ++ L L  C  
Sbjct: 213 EYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALP-NLSNATKMEILKLSDCKS 271

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCY 116
              +  +   ++ LE+L + G  ++   P+ + L + L  L  RGC    N P  S   Y
Sbjct: 272 LVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNL-EFLYDLDMRGCSRLRNIPVMSTRLY 330

Query: 117 LPFPINLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGA--IPSDIGNLHSLKTLY 173
               +N+   +  D+ A    S++    +T L ++      G   +P  +      + L 
Sbjct: 331 F---LNISETAVEDVSA----SITSWHHVTHLSINSSAKLRGLTHLPRPV------EFLD 377

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
           LS +    +P  I   + L+ L +  C+RL SLP+LP +++ +  + C SL T+    K 
Sbjct: 378 LSYSGIERIPNCIKDRYLLKSLTISGCRRLTSLPELPASLKFLVADDCESLETVFCPFKT 437

Query: 234 RKS-SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNE 292
            K     I +F +  KL  +   AI         +  P    + ++PG E+P  F ++  
Sbjct: 438 SKCWPFNIFEFTNCFKLDQEARRAI---------IQRPFFHGTTLLPGREVPAEFDHRGR 488

Query: 293 GSSITV 298
           G+++T+
Sbjct: 489 GNTLTI 494


>gi|6967115|emb|CAB72469.1| disease resistance protein homlog [Arabidopsis thaliana]
          Length = 1199

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 39/237 (16%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL L D + + E+P SIE L+ L +L L+ C +LV LPS  N+ K L+ L L  C   
Sbjct: 741 LEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATK-LEELYLENCSSL 799

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E L  ++    +L++L +   +      +I    NL+ L    C     S+   LP  I 
Sbjct: 800 EKLPPSIN-ANNLQQLSLINCSRVVELPAIENATNLQKLDLGNC-----SSLIELPLSIG 853

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
                 +L      ++SG  SL KL            PS IG++ +LK   LS  +N V 
Sbjct: 854 TATNLKEL------NISGCSSLVKL------------PSSIGDITNLKEFDLSNCSNLVE 895

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNV-----------EKVRVNGCASLVTL 227
           LP +IN  F L+ L L  C +L+S P++   +             +R+N C +LV+L
Sbjct: 896 LPININLKF-LDTLNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSL 951



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L++ + + E+P +IE  + L +L L  C +L+ LP +I +  +LK LN+ GC     L  
Sbjct: 816 LINCSRVVELP-AIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPS 874

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
           ++G + +L+E D+S  +          +K L TL+  GC+   S          +  +R 
Sbjct: 875 SIGDITNLKEFDLSNCSNLVELPININLKFLDTLNLAGCSQLKSFPEISTKIFTDCYQRM 934

Query: 128 SDLGALMLPSLSGLGSLTKL 147
           S L  L + + + L SL +L
Sbjct: 935 SRLRDLRINNCNNLVSLPQL 954



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 11/99 (11%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           LP+LS   +L +L L DC      +PS I  L SL+ LYL + ++ V LP+  N    LE
Sbjct: 732 LPNLSTATNLEELKLRDCS-SLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNAT-KLE 789

Query: 194 KLKLEDCKRLQSLPQLPP-----NVEKVRVNGCASLVTL 227
           +L LE+C    SL +LPP     N++++ +  C+ +V L
Sbjct: 790 ELYLENC---SSLEKLPPSINANNLQQLSLINCSRVVEL 825


>gi|297801406|ref|XP_002868587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314423|gb|EFH44846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 58/292 (19%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L  LTL  C +L  LP +I++L  L  L +  C K   ++ T   + 
Sbjct: 619 LKEIP-NLSNATNLETLTLVRCTSLTELPFSISNLHKLSKLKMRVCEKLR-VIPTNINLA 676

Query: 74  SLEELDISGTAIRCPPSSIF--LMKNLKTLSFRGC---NGPPSSASCYLPFPINLMRRSS 128
           SLEE+D++     C   S F  +  N+KTL        + PPS A C+           S
Sbjct: 677 SLEEVDMN----YCSQLSSFPDISSNIKTLGVGNTKIEDVPPSVAGCW-----------S 721

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
            L  L + S S L  LT                     HS+  L LS +N   +P  +  
Sbjct: 722 RLDCLEIGSRS-LNRLTHAP------------------HSITWLDLSNSNIKRIPDCVIS 762

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLK 248
           L +L++L +E+C++L ++P LPP+++ +  N C SL  +        +   I+ F + LK
Sbjct: 763 LPHLKELIVENCQKLVTIPALPPSLKSLNANECVSLERVCFYF---HNPTKILTFYNCLK 819

Query: 249 L--LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
           L    + G+    + ++            I +PG +IP  F  +  G SIT+
Sbjct: 820 LDEEARRGITQQSIHDY------------ICLPGKKIPAEFTQKATGKSITI 859


>gi|224123362|ref|XP_002319060.1| predicted protein [Populus trichocarpa]
 gi|222857436|gb|EEE94983.1| predicted protein [Populus trichocarpa]
          Length = 144

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 2/144 (1%)

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA-SCYLPFPINLMRRSSDL 130
           +ESL EL    TAIR  PSS+  +K L+ LS  GCN    S  + +L    + +  +S  
Sbjct: 1   MESLTELLADETAIRQLPSSVGQLKRLRKLSLSGCNSKQDSPFTSWLSLISSWLSPTSST 60

Query: 131 GALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
             ++LP+     SL +       GL EG I  D+G+L SL+ L LS N F  LP+SI  L
Sbjct: 61  SKVLLPASLSSLSLLRGLDLSYRGLSEGEISIDLGSLSSLQELNLSGNKFFNLPSSIGLL 120

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNV 213
             L  L ++DC  L S+P+LPP++
Sbjct: 121 PKLNYLLVKDCTNLLSVPELPPSL 144


>gi|357499649|ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
 gi|355495128|gb|AES76331.1| Resistance protein PRG [Medicago truncatula]
          Length = 1256

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 59/320 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +REL+LD         ++  L  L   + + CKNL+ + +++  L  LK LN   C K  
Sbjct: 641 MRELILDHCQCLIRIHNVSGLPNLETFSFQCCKNLITVHNSVGLLNKLKILNAKRCSKLT 700

Query: 64  NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTL------------SFRGCNG-- 108
           +      ++ SL EL++S  T+++  P  +  +KN+  +            SFR  +G  
Sbjct: 701 SFPPM--KLTSLHELELSYCTSLKSFPEILGEIKNVTRILLRGTFIEELPYSFRNLSGLH 758

Query: 109 ---PPSSASCYLPFPINLM---RRSSDLGALMLPS----LSGLGSLTKLDLSDCGLGEGA 158
                 S +  LPF I +M    R    G L+       L      + +    C L    
Sbjct: 759 RLLIWGSRNVRLPFGILMMPNLARIEAYGCLLFQKDNDKLCSTTMSSCVQFLRCKLSVEF 818

Query: 159 IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           +P  +  + ++K L LS +NF  LP  +     L+ L+L++CK LQ +  +PPN++ V  
Sbjct: 819 LPIVLSQITNVKDLVLSGSNFTILPECLKECNFLQSLELDNCKSLQEIRGIPPNLKHVSA 878

Query: 219 NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVV 278
             C SL  L                    KLL +            E+  A S  F    
Sbjct: 879 LRCESLTYLC-----------------RWKLLNQ------------ELHEAGSTDFRWA- 908

Query: 279 PGSE-IPKWFMYQNEGSSIT 297
            G+E IP+WF +Q++G SIT
Sbjct: 909 -GTERIPEWFEHQSKGPSIT 927


>gi|21109412|gb|AAM37935.1| leucin rich protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 497

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 37/217 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 97  LQHMTIDAAGLMELPDTMQQFAGLETLTL--ARNPLRALPASIASLSRLRELSIRACPEL 154

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T I   P+SI  ++NLK+L  R  N P S+ 
Sbjct: 155 TELPEHLASTDASGEHQGLVNLQSLRLERTGITSLPASIANLQNLKSLKIR--NSPLSA- 211

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                           LG    P++  L  L +LDL  C     + P   G    LK L 
Sbjct: 212 ----------------LG----PAIHQLPKLEELDLRGCT-ALRSYPPIFGGSAPLKRLI 250

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           L   +N +TLP  I+ L  LEKL L  C  L  LP L
Sbjct: 251 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 287


>gi|227438219|gb|ACP30599.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 963

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 18/218 (8%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L+ LV   L  CKNL  LP+NIN LKSL++L+L GC   E   E     E++E+L 
Sbjct: 725 SLRQLNKLVHFKLSNCKNLKSLPNNIN-LKSLRSLHLNGCSSLE---EFPFISETVEKLL 780

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP--- 136
           ++ T+I+  P SI  +  L+ +   GC    +   C     I  ++  +DLG    P   
Sbjct: 781 LNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPEC-----IKNLKFLNDLGLANCPNVI 835

Query: 137 SLSGLG-SLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEK 194
           S   LG S+  L+L+  G+ E  +P  IG+   L+ L +S  +  +TLP ++  L  L+ 
Sbjct: 836 SFPELGRSIRWLNLNKTGIQE--VPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLGQLKY 893

Query: 195 LKLEDCKRLQSLPQLP--PNVEKVRVNGCASLVTLLGA 230
           L L  C  +   P L     ++ + ++G +    L+G+
Sbjct: 894 LNLRGCVNVTESPNLAGGKTMKALDLHGTSITEKLVGS 931



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 10/165 (6%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E + +LLL++T I+++P SIE L+ L  + L GCK L+ LP  I +LK L  L L  C  
Sbjct: 774 ETVEKLLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANC-- 831

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYL 117
             N++       S+  L+++ T I+  P +I     L+ L+  GC+     PP+      
Sbjct: 832 -PNVISFPELGRSIRWLNLNKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLGQ 890

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
              +NL      +     P+L+G  ++  LDL    + E  + S+
Sbjct: 891 LKYLNL---RGCVNVTESPNLAGGKTMKALDLHGTSITEKLVGSN 932



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 33/223 (14%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L  D   +K +P      S LV+L L           +   L +L++LNL+ C K  
Sbjct: 638 LRYLHWDAYHLKSLPPQF-CTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLISC-KHL 695

Query: 64  NLLETVGQVESLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
           N    + +  +LE L +S     +  P SS+  +  L       C    S          
Sbjct: 696 NEFPDLSKATNLESLKLSNCDNLVEIPDSSLRQLNKLVHFKLSNCKNLKS---------- 745

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCG-LGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                        LP+   L SL  L L+ C  L E    S+     +++ L L++ +  
Sbjct: 746 -------------LPNNINLKSLRSLHLNGCSSLEEFPFISE-----TVEKLLLNETSIQ 787

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCAS 223
            +P SI  L  L  + L  CKRL +LP+   N++ +   G A+
Sbjct: 788 QVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLAN 830


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET- 68
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL T 
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTTL 86

Query: 69  ---VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
              +GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQNNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
             LP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TILPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 28/208 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LREL L       +P  I  L  L  L L G   L ++PS I  L++L+ LNL    + E
Sbjct: 378 LRELYLYDCGFSTLPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNL-EANELE 435

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--- 120
            L + +GQ+ +L+ L +    ++  P+ I  +K L+ L          S + +  FP   
Sbjct: 436 RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEI 487

Query: 121 --------INLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   +NL R   ++L A     +  L +L +LDL+D       +P +IG L  L+T
Sbjct: 488 GKLENLQTLNLQRNQLTNLPA----EIEQLKNLQELDLNDNQFT--VLPKEIGKLKKLQT 541

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLED 199
           L L  N   TLP  I  L NL+ L L++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQN 569



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    + +   +GQ+ +LE L++    +   P  I  ++NL+ 
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 450 LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 484

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    LPA I  L NL++L L D             K+LQ+L  
Sbjct: 485 KEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL-- 542

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 543 ------DLRNNQLTTLPTEIGQLQ 560



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQNN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++    LP  
Sbjct: 197 QFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVLPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLKNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL 206
            LP  I  L NL+ L+       L++ KR+Q L
Sbjct: 292 VLPKEIGQLQNLQDLELLMNPLSLKERKRIQKL 324



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTL----NL 56
           ++ L+ L L    +K++P  I  L  L  L L+  + L RLP  I  L++L+ L    N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE-LERLPKEIGQLRNLQRLSLHQNT 456

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L  F  E     + Q++ L++LD+S       P  I  ++NL+TL+ +       +    
Sbjct: 457 LKIFPAE-----IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQ------RNQLTN 505

Query: 117 LPFPINLMRRSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
           LP  I  ++   +L        +LP   G L  L  LDL +  L    +P++IG L +L+
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT--TLPTEIGQLQNLQ 563

Query: 171 TLYLSKNNF 179
            LYL  N F
Sbjct: 564 WLYLQNNQF 572



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTTLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180


>gi|418701961|ref|ZP_13262879.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759093|gb|EKR25312.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 267

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 13/200 (6%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L++L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQNLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD++G  +   P  I  ++ L+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLNGNQLASLPKEIGQLQKLRVLNLAG------NQFTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 SL   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L NL+ L L D  +L SLP+
Sbjct: 177 LQNLQSLHL-DGNQLTSLPK 195



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G + L  LP  I  L+ L+ LNL G  
Sbjct: 39  LQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLNGNQ-LASLPKEIGQLQKLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 97  QFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L NL+ L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 10/146 (6%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           +G  + E+L   +G  ++LE+L++ G  +   P  I  ++NL+ L+  G      +    
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG------NQFTS 54

Query: 117 LPFPINLMRRSS--DLGALMLPSL-SGLGSLTKLD-LSDCGLGEGAIPSDIGNLHSLKTL 172
           LP  I  ++     DL    L SL   +G L KL  L+  G    ++P +IG L +L+ L
Sbjct: 55  LPKEIGQLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERL 114

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLE 198
            L+ N F +LP  I  L  LE L L+
Sbjct: 115 DLAGNQFTSLPKEIGQLQKLEALNLD 140



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L +L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           +L L +  +L SLP+    ++K+RV   A
Sbjct: 67  RLDL-NGNQLASLPKEIGQLQKLRVLNLA 94


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 33/217 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L    I+ +   +  L  L +L L   + L  LP  I  L++L+TLNL G  
Sbjct: 186 LQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENR-LTVLPKEIGQLQNLQTLNL-GYN 243

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  N+ + +G++ SL+ELD+S   ++  P  +  + NL++L          +    LP  
Sbjct: 244 KLANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLN------DNRIVNLPKE 297

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I L++                 +L  LDLS  G     +P +IG L +L++L LS N F 
Sbjct: 298 IELLQ-----------------NLRSLDLS--GNQFKVLPKEIGRLQNLQSLDLSDNQFT 338

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           TLP+ +  L NL+KL ++      S P LP   +K++
Sbjct: 339 TLPSEVGELRNLKKLNID------SNPLLPGEKDKIQ 369



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 29/172 (16%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LP  I  L +LK LN+    K     E +G++++L++LD+S   I+     +  ++N
Sbjct: 153 LTILPKGIGELSNLKILNV-SYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRN 211

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+ L+         +    LP  I                    G L  L   + G  + 
Sbjct: 212 LERLNL------IENRLTVLPKEI--------------------GQLQNLQTLNLGYNKL 245

Query: 158 A-IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           A IP +IG L SLK L LS N    LP  +  + NL+ LKL D  R+ +LP+
Sbjct: 246 ANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLND-NRIVNLPK 296



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 6/182 (3%)

Query: 28  VQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRC 87
            Q+ +   + L  LP  + +L +L+ LNL    +   + E + +++ L+ LD+ G  +  
Sbjct: 51  AQILVLSSQELTVLPWEVGNLGNLQELNL-AFNELSTIPEEIKRLQKLQSLDLYGNRLEA 109

Query: 88  PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKL 147
            P  I  ++NL  LS          A   L   +  +  S D    +LP   G+G L+ L
Sbjct: 110 LPPEIGQLQNLSWLSLSKNQLATLPAEIKLLQNLQYLNLSKD-RLTILP--KGIGELSNL 166

Query: 148 DLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
            + +    + ++ P +IG L +LK L LS N    +   +  L NLE+L L +  RL  L
Sbjct: 167 KILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIE-NRLTVL 225

Query: 207 PQ 208
           P+
Sbjct: 226 PK 227



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 53/176 (30%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           +P  I  L++L+TL L G  + + L + +GQ+++L  L +    ++  P  I  ++NL  
Sbjct: 441 IPKEIRRLQNLETLRL-GLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNL-- 497

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
              RG N   +    +                                           P
Sbjct: 498 ---RGLNLHQNRFKIF-------------------------------------------P 511

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED----CKRLQSLPQLPPN 212
            +IG L  L+ L LS N   TLPA I  L NL++L L D     K  + + +L PN
Sbjct: 512 KEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLSLKEKERIRKLLPN 567


>gi|357499565|ref|XP_003620071.1| Disease resistance-like protein GS4B-5, partial [Medicago
           truncatula]
 gi|355495086|gb|AES76289.1| Disease resistance-like protein GS4B-5, partial [Medicago
           truncatula]
          Length = 375

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 137/309 (44%), Gaps = 56/309 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           ++ L+LD+         +  LS L +L+ + C NL+ + ++I  L  L+ L+  GC K E
Sbjct: 37  MKVLILDRCKYLTHIPDVSGLSNLEKLSFERCYNLITIHNSIGHLNKLERLSAYGCNKVE 96

Query: 64  NLLETVGQVESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           +    +G + SL+EL++S   +++  P  +  M N+  +    CN         LPF   
Sbjct: 97  HF-PPLG-LASLKELNLSSCRSLKSFPELLCKMTNIDNIWL--CNTSIGE----LPFSFQ 148

Query: 123 ----LMRRSSDLGALMLPSLSG------LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
               L + S   G L  P  +         ++T+L L  C L +  +   +    ++ +L
Sbjct: 149 NLSELHKLSVTYGMLRFPKQNDKMYSIVFSNVTQLTLYHCNLSDECLRRVLKWCVNMTSL 208

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT----LL 228
            L  +NF  LP  ++   +L ++ +  C+ L+ +  +PPN++++   GC SL +    +L
Sbjct: 209 NLLYSNFKILPECLSECHHLVEINVGYCESLEEIRGIPPNLKEINAQGCQSLSSSSKRIL 268

Query: 229 GALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFM 288
            + KL ++ CT I F +     G +G                            IP WF 
Sbjct: 269 MSQKLHQAGCTYIKFPN-----GTDG----------------------------IPDWFE 295

Query: 289 YQNEGSSIT 297
           +Q+ G +I+
Sbjct: 296 HQSRGPTIS 304


>gi|147777715|emb|CAN66808.1| hypothetical protein VITISV_010918 [Vitis vinifera]
          Length = 615

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 1/107 (0%)

Query: 1   MECLRELLLDKTDIKEMPLSIEL-LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ME L EL L  T I+E+  SI   ++GLV L L  CK L  LP+ I  LKSL  L L GC
Sbjct: 454 MEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIFKLKSLXYLFLSGC 513

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC 106
            K EN  E +  +E+L EL + GT+I   P SI  +K L  L+ R C
Sbjct: 514 SKLENFPEIMEDMENLXELLLDGTSIEALPFSIERLKGLGLLNMRKC 560



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 87/210 (41%), Gaps = 26/210 (12%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L +L+LD  +   E+  SI  L  ++ L +K CK L   PS I+ +++LK LN  GC + 
Sbjct: 386 LEKLILDGCSSFLEVHPSIGRLKKIIVLNIKNCKKLGSFPSIID-MEALKILNFAGCSEL 444

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSI-FLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
           +   +    +E L EL +S T I    SSI + +  L  L    C       +C      
Sbjct: 445 KKFPDIQCNMEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIFK--- 501

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                              L SL  L LS C   E   P  + ++ +L  L L   +   
Sbjct: 502 -------------------LKSLXYLFLSGCSKLEN-FPEIMEDMENLXELLLDGTSIEA 541

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
           LP SI  L  L  L +  CK+L+    L P
Sbjct: 542 LPFSIERLKGLGLLNMRKCKKLRMRTNLNP 571



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLK 52
           ME L ELLLD T I+ +P SIE L GL  L ++ CK L R+ +N+N L  LK
Sbjct: 526 MENLXELLLDGTSIEALPFSIERLKGLGLLNMRKCKKL-RMRTNLNPLWVLK 576


>gi|421126398|ref|ZP_15586631.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. 2006006986]
 gi|421137161|ref|ZP_15597249.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. Andaman]
 gi|410018655|gb|EKO85492.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. Andaman]
 gi|410436107|gb|EKP85230.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. 2006006986]
          Length = 1616

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ CK L  +P +I +LK L  L  L   +   L 
Sbjct: 1226 LNLSGTKFERFPISVTRFQNLTSLSLRDCK-LSEVPESIGNLKRLINL-YLDKNQLTTLP 1283

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L +L I        P ++  +KNLKTL  R       +    LP  I  +  
Sbjct: 1284 ASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARW------NQISTLPNEIGNLTS 1337

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSD------------------CGLGEGAI--- 159
              DL       + +  ++  L SLTK+ LS                     +GE  I   
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK+L + +    +LP SI  L  LE + L   K  ++LP    N+E ++
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAK-FRNLPDFLANMESLK 1454



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L  L LDK  +  +P S+  L  L QL +        +P  + SLK+LKTL L    +  
Sbjct: 1269 LINLYLDKNQLTTLPASLGTLEQLTQLHIDS-NPFTTIPDAVLSLKNLKTL-LARWNQIS 1326

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
             L   +G + SLE+L++    +   P++I   +NL +L+  G +    S     P PI  
Sbjct: 1327 TLPNEIGNLTSLEDLNLHDNQLSSLPTTI---QNLSSLTKIGLSKNKFSE---FPEPILY 1380

Query: 124  MR--RSSDLGA---LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
            ++  +  D+G      LP ++  L +L  LD+ +  +   ++P  I NL  L+T+YL K 
Sbjct: 1381 LKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETWIE--SLPQSIQNLTQLETIYLPKA 1438

Query: 178  NFVTLPASINCLFNLEKLKLE 198
             F  LP  +  + +L+K+K E
Sbjct: 1439 KFRNLPDFLANMESLKKIKFE 1459



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 34/189 (17%)

Query: 12   TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
            T I+E+    +  + L +LTL G      L S + +LK ++  N     K  N+L +   
Sbjct: 1142 TSIQEL----KFFTKLEELTLNGPVTDSSLLSELKNLKKIELQNW--NLKDLNVLNSCTN 1195

Query: 72   VESLEELDISG--TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
            +E +E +DI G  T   C   S  L ++  T+          S + +  FPI++ R    
Sbjct: 1196 LEKVELVDIQGFETDFDC---SGLLNESKATIHLN------LSGTKFERFPISVTR---- 1242

Query: 130  LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
                         +LT L L DC L E  +P  IGNL  L  LYL KN   TLPAS+  L
Sbjct: 1243 -----------FQNLTSLSLRDCKLSE--VPESIGNLKRLINLYLDKNQLTTLPASLGTL 1289

Query: 190  FNLEKLKLE 198
              L +L ++
Sbjct: 1290 EQLTQLHID 1298


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 19/176 (10%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
             + L  LP  I  L++LK+L+L    +F+ L + +GQ+++L+EL++    ++  P  I 
Sbjct: 56  SSQKLTTLPKEIKQLQNLKSLDL-ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIG 114

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPI------NLMRRSSDLGAL--MLPSLSGLGSLT 145
            +++L+TL          S +    FP       NL + + D   L  +L  +  L SL 
Sbjct: 115 QLQSLQTLIL--------SVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 146 KLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           KL+L    L   A+P++IG L +L+ LYLS N    LP  I  L NL+ L L D +
Sbjct: 167 KLNLDKNRL--KALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQ 220



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 13/211 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +K +P  I  L  L  L L     L   P  I  LK+L+ LNL    
Sbjct: 93  LQNLQELNLWNNQLKNLPKEIGQLQSLQTLIL-SVNRLTTFPQEIGQLKNLQKLNL-DYN 150

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   LL+ +GQ++SL++L++    ++  P+ I  ++NL+ L         ++    LP  
Sbjct: 151 QLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYL------SNNQLTILPEE 204

Query: 121 INLMR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSK 176
           I  ++  ++  LG   L  L   +G L  L L      E  I P +IG L  L+ LYLS 
Sbjct: 205 IGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSH 264

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           N   TLP  I  L NL++L L D  +L +LP
Sbjct: 265 NQLTTLPKEIGQLENLQELYLND-NQLTTLP 294



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 27/201 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L LDK  +K +P  I  L  L +L L   + L  LP  I  LK+L+ L +LG  
Sbjct: 162 LQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQ-LTILPEEIGQLKNLQAL-ILGDN 219

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+ L      +   P  I  ++ L+ L          +    LP  
Sbjct: 220 QLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYL------SHNQLTTLPKE 273

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L +L +L L+D  L    +P +IG L +L+T     N   
Sbjct: 274 I-----------------GQLENLQELYLNDNQLT--TLPKEIGQLKNLQTFISFNNQLT 314

Query: 181 TLPASINCLFNLEKLKLEDCK 201
            LP  I  L NL+ LKL + +
Sbjct: 315 MLPNEIGQLQNLQWLKLNNNQ 335



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 22/135 (16%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK---- 196
           L +L +L+L +  L    +P +IG L SL+TL LS N   T P  I  L NL+KL     
Sbjct: 93  LQNLQELNLWNNQLKN--LPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYN 150

Query: 197 -----LEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK---LRKSSCTII-DFVDSL 247
                L++  +LQSL +L  N++K R+    + +  L  L+   L  +  TI+ + +  L
Sbjct: 151 QLTTLLQEIGQLQSLQKL--NLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQL 208

Query: 248 K-----LLGKNGLAI 257
           K     +LG N L I
Sbjct: 209 KNLQALILGDNQLTI 223


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L    IK +P  IE L  L  L L   + L  LP  I  L++L++L+L    
Sbjct: 162 LKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQ-LTTLPQEIGQLQNLQSLDL-STN 219

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L++L +    +   P+ I  +KNL+TL+ R  N   ++ S  +   
Sbjct: 220 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLR--NNRLTTLSKEIEQL 277

Query: 121 INLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNN 178
            NL  +S DL +  L      +G L  L + D G  +   +P  IG L +LK L+L+ N 
Sbjct: 278 QNL--KSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQ 335

Query: 179 FVTLPASINCLFNLEKLKLED 199
             TLP  I  L NL++L L +
Sbjct: 336 LTTLPKEIGQLKNLQELYLNN 356



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 50/265 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL------- 56
           +R L L     K +P  I  L  L +L L   + L  LP  I  LK+L+ LNL       
Sbjct: 50  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIGQLKNLRKLNLSANQIKT 108

Query: 57  ---------------LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
                          L   +   L + +GQ++ L+ L +    +   P  I  +KNLK+L
Sbjct: 109 IPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 168

Query: 102 SFRGCNGPPSSASCYLPFPINLMRRSSDLG-----ALMLPSLSG-LGSLTKLDLSDCGLG 155
           +         +    +P  I  +++   LG        LP   G L +L  LDLS   L 
Sbjct: 169 NL------SYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRL- 221

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
              +P +IG+L +L+ LYL  N    LP  I  L NL+ L L + +    L  L   +E+
Sbjct: 222 -TTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR----LTTLSKEIEQ 276

Query: 216 VRVNGCASLVTLLGALKLRKSSCTI 240
           ++          L +L LR +  TI
Sbjct: 277 LQN---------LKSLDLRSNQLTI 292


>gi|357153349|ref|XP_003576423.1| PREDICTED: uncharacterized protein LOC100836991 [Brachypodium
           distachyon]
          Length = 1651

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 35/236 (14%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           + +LL  L  L L G   +  +P+++  LK L+ L++    K + L  ++  +  LE LD
Sbjct: 569 AFKLLKHLRVLNLSG-SCIGEIPASVGHLKHLRYLDI-SDLKIQTLPSSMSMLTKLEALD 626

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPP----------------------SSA 113
           +S T++R  PS I  ++NLK L+ +GC    N PP                      + +
Sbjct: 627 LSNTSLRELPSFIGTLQNLKYLNLQGCHILQNLPPILGHLRTLEHLRLSCCYDVNELADS 686

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
            C L   +  +  SS      LP L G L +L  L+LS C      +P   GNL  L+ L
Sbjct: 687 LCNLQ-GLRFLDLSSCTELPQLPPLFGDLTNLEDLNLSGC-FSIKQLPESFGNLCFLRYL 744

Query: 173 YLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASL 224
            +S     + LP S+  L  LE L L  C+RLQSLP    N++ +R+    GC +L
Sbjct: 745 NISSCYELLQLPESLGNLMKLEVLILRRCRRLQSLPPSFWNIQDLRILDLAGCEAL 800


>gi|307135899|gb|ADN33763.1| melon resistance-like protein [Cucumis melo subsp. melo]
          Length = 534

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 139/339 (41%), Gaps = 57/339 (16%)

Query: 23  LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ-------VESL 75
            L  LV L  +GC+NL RLP  I+   S++ LNL  C K E + +   +        ESL
Sbjct: 188 FLDKLVILDFEGCRNLERLPRYISKSGSIEVLNLDSCRKIEQIFDNYFEKFPSHLKYESL 247

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSS---------------ASCYLPFP 120
           + L++S        +      NL+ L  RGC    +                 SC+L   
Sbjct: 248 KVLNLSYCQNLKGITDFSFASNLEILDLRGCFSLRTIHESVGSLDKLIALKLDSCHLLEE 307

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLH----SLKTLYLSK 176
           +    R   L +L L +   L  L + D +   L E  +   + NL     +LK L LS 
Sbjct: 308 LPSCLRLKSLDSLSLTNCYKLEQLPEFDENMKSLREMNLKDFLENLSNFCTTLKELNLSG 367

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
           N F +LP S+    +L  L+L +CK L+++ ++P  + +V  +GC   V           
Sbjct: 368 NKFCSLP-SLQNFSSLRHLELRNCKFLRNIVKIPHCLTRVDASGCELFV----------- 415

Query: 237 SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSI 296
                        +  + +A  M R   + +   + K  ++V  S+IPK+   Q   SS 
Sbjct: 416 -------------ISPDYIADIMFRN--QDLELRNFKRELIVAYSKIPKFCNNQTTESS- 459

Query: 297 TVTRPSYLCNMNQVV-GYAACRVFHVPKHSTGIRRFYRY 334
             T  S+  N + ++     C VF V + S     F R+
Sbjct: 460 --TSFSFQQNSDTIIPALVVCVVFKVDEDSCDAEGFIRF 496


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 134/287 (46%), Gaps = 23/287 (8%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L +L L    + ++P SI  L  L QL L     L ++  +I+ L +L  L+L G  K  
Sbjct: 185 LTQLDLSVNKLTQVPESISQLVNLTQLNL-SYNQLTQVSESISQLVNLTQLSLSGN-KLT 242

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            + E++ Q+ +L +L +SG  +   P SI  + NL  LS         S S      +  
Sbjct: 243 QVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQ 302

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           +  SS+    +  S+S L +LT+LDLS   L +  +   I  L +L  L LS N    +P
Sbjct: 303 LDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQ--VSESISQLVNLTQLNLSINKLTQVP 360

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTII-D 242
            SI+ L NL  L L D +    L Q+P ++ ++ VN        L  L L  +  T I D
Sbjct: 361 ESISQLVNLTWLNLSDNQ----LTQVPESISQL-VN--------LTQLDLFGNKITEIPD 407

Query: 243 FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMY 289
           +++ L  L +  L  + L    E++ +P H+     PGS I K F Y
Sbjct: 408 WLEELPNLKELDLRQNPLPISPEILGSPYHQ----EPGS-IEKIFNY 449



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 12/205 (5%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L +L L    + ++P SI  L  L +L L     L ++P +I+ L +L  LNL G  +  
Sbjct: 47  LTQLDLSHNQLTQVPESITQLVNLTKLNL-SVNQLTQVPESISQLVNLTKLNLSGN-QLT 104

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF--RGCNGPPSSASCYLPFPI 121
            + E++ Q+ +L +L +SG  +   P SI  + NL  LS         P S S      +
Sbjct: 105 QVSESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQL----V 160

Query: 122 NLMRRSSDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
           NL + +     L  +P S+S L +LT+LDLS   L +  +P  I  L +L  L LS N  
Sbjct: 161 NLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQ--VPESISQLVNLTQLNLSYNQL 218

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQ 204
             +  SI+ L NL +L L   K  Q
Sbjct: 219 TQVSESISQLVNLTQLSLSGNKLTQ 243



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 15/170 (8%)

Query: 51  LKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT--LSFRGCNG 108
           +  LNL G  +   + E++ Q+ +L ELD+S   +   P SI  + NL    LS      
Sbjct: 1   MTQLNLSGN-QLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQ 59

Query: 109 PPSSASCYLPFPINLMRRSSDLGAL-MLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNL 166
            P S +      +NL + +  +  L  +P S+S L +LTKL+LS   L +  +   I  L
Sbjct: 60  VPESITQL----VNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQ--VSESISQL 113

Query: 167 HSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            +L  L LS N     P SI+ L NL +L L   +    L Q+P ++ ++
Sbjct: 114 VNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQ----LTQVPESISQL 159


>gi|223452607|gb|ACM89630.1| resistance protein [Glycine max]
          Length = 409

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 30/166 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ME L  L+L +T I ++P S+  L GL  L LK CKNLV LP   + LKSLK L++ GC 
Sbjct: 264 MEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGCS 323

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K  +L + + +++ LE++ +S       PSS F ++NL+ ++F             LP  
Sbjct: 324 KLCSLPDGLEEMKCLEQICLSADDSVELPSSAFNLENLQ-ITFE------------LP-- 368

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNL 166
                          PS   L SL +++LS C L + +IP +  +L
Sbjct: 369 ---------------PSKLNLPSLKRINLSYCNLSKESIPDEFCHL 399



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 29/187 (15%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  S+     L  + L+ CK L  LPSN+  + SLK LNL GC +F+ L E    
Sbjct: 205 TSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNME-MSSLKYLNLSGCSEFKYLPEFGES 263

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +E L  L +  T I   PSS+  +  L  L+ + C                         
Sbjct: 264 MEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCK-----------------------N 300

Query: 132 ALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
            + LP +   L SL  LD+  C     ++P  +  +  L+ + LS ++ V LP+S    F
Sbjct: 301 LVCLPDTFHKLKSLKFLDVRGCS-KLCSLPDGLEEMKCLEQICLSADDSVELPSSA---F 356

Query: 191 NLEKLKL 197
           NLE L++
Sbjct: 357 NLENLQI 363



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 5/143 (3%)

Query: 97  NLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCGLG 155
           NL++L   GC          +      M    D   L  LPS   + SL  L+LS C   
Sbjct: 195 NLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNMEMSSLKYLNLSGCSEF 254

Query: 156 EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           +  +P    ++  L  L L +     LP+S+ CL  L  L L++CK L  LP     ++ 
Sbjct: 255 K-YLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKS 313

Query: 216 VR---VNGCASLVTLLGALKLRK 235
           ++   V GC+ L +L   L+  K
Sbjct: 314 LKFLDVRGCSKLCSLPDGLEEMK 336


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 6/171 (3%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LP+ +  L ++K LNL  C +   L   VG++  LE LD+S   ++  P+ +  + N
Sbjct: 35  LQTLPAEVGQLTNVKHLNLSHC-QLRTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTN 93

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           +K L    C         +    +  +  SS+    +   +  L ++  LDLS C L   
Sbjct: 94  VKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLR-- 151

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKR-LQSLP 207
            +PS++G L  L+ L LS N   TLPA +  L NLEKL L  C   LQ+LP
Sbjct: 152 TLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDL--CSNPLQTLP 200



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 8/213 (3%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           ++ L L    ++ +P  +  L+ L  L L+    L  LP+ +  L ++K LNL  C +  
Sbjct: 209 VKHLDLSHCQLRTLPFEVWKLTQLEWLDLRS-NPLQTLPTEVGHLTNVKYLNLSDC-QLH 266

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L   VG++  LE+LD+    ++  P+ +    N+K L    C         +    +  
Sbjct: 267 ILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEW 326

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           +  SS+    +   +  L ++ +L+LSDC L    +P ++G L  L+ L LS N   TLP
Sbjct: 327 LSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLH--TLPPEVGKLTQLERLDLSSNPLQTLP 384

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
           A +  L N++ L L  C     L  LPP V ++
Sbjct: 385 AEVGQLTNVKHLDLSQCL----LHTLPPEVGRL 413



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 18/218 (8%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKN-LVRLPSNINSLKSLKTLNLLGCFKF 62
           L  L L    ++ +P  +  L+ L +L L  C N L  LP+ +    ++K L+L  C + 
Sbjct: 163 LEWLDLSSNPLQTLPAEVGHLTNLEKLDL--CSNPLQTLPAEVGHCTNVKHLDLSHC-QL 219

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPF 119
             L   V ++  LE LD+    ++  P+ +  + N+K L+   C     PP         
Sbjct: 220 RTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLE 279

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTK-LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
            ++L   S+ L  L  P+  G  +  K LDLS C L    +P ++  L  L+ L LS N 
Sbjct: 280 KLDLC--SNPLQTL--PAEVGHCTNVKHLDLSHCQLR--TLPFEVWKLTQLEWLSLSSNP 333

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
             TLPA +  L N+++L L DC+    L  LPP V K+
Sbjct: 334 LQTLPAEVGQLTNVKQLNLSDCQ----LHTLPPEVGKL 367



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 38/246 (15%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           ++ L L    +  +PL +  L+ L  L L     L  LP+ +  L ++K L+L  C +  
Sbjct: 94  VKHLDLSHCQLHTLPLEVWKLTQLEWLDLSS-NPLQTLPAEVGQLTNVKHLDLSQC-QLR 151

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L   VG++  LE LD+S   ++  P+ +  + NL+ L    C+ P             L
Sbjct: 152 TLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDL--CSNP-------------L 196

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
               +++G           ++  LDLS C L    +P ++  L  L+ L L  N   TLP
Sbjct: 197 QTLPAEVG--------HCTNVKHLDLSHCQLR--TLPFEVWKLTQLEWLDLRSNPLQTLP 246

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV----RVNGCASLVTLLGALKLRKSSCT 239
             +  L N++ L L DC+    L  LPP V ++    +++ C++ +  L A       CT
Sbjct: 247 TEVGHLTNVKYLNLSDCQ----LHILPPEVGRLTQLEKLDLCSNPLQTLPA---EVGHCT 299

Query: 240 IIDFVD 245
            +  +D
Sbjct: 300 NVKHLD 305



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)

Query: 17  MPLSIELLSGLVQLTLKGCKN-LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           +P  +  L+ L +L L  C N L  LP+ +    ++K L+L  C +   L   V ++  L
Sbjct: 268 LPPEVGRLTQLEKLDL--CSNPLQTLPAEVGHCTNVKHLDLSHC-QLRTLPFEVWKLTQL 324

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPFPINLMRRSSDLGA 132
           E L +S   ++  P+ +  + N+K L+   C     PP          +  +  SS+   
Sbjct: 325 EWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLT---QLERLDLSSNPLQ 381

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
            +   +  L ++  LDLS C L    +P ++G L  L+ L L  N    LPA +  L N+
Sbjct: 382 TLPAEVGQLTNVKHLDLSQCLLH--TLPPEVGRLTQLEWLDLRSNPLHALPAEVGQLTNV 439

Query: 193 EKLKLEDCKRLQSLPQLPPNVEKV 216
           + L L  C+    L  LPP V ++
Sbjct: 440 KHLDLSHCQ----LHTLPPEVGRL 459



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 27/189 (14%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           ++ L L    ++ +P  +  L+ L  L+L     L  LP+ +  L ++K LNL  C +  
Sbjct: 301 VKHLDLSHCQLRTLPFEVWKLTQLEWLSLSS-NPLQTLPAEVGQLTNVKQLNLSDC-QLH 358

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L   VG++  LE LD+S   ++  P+ +  + N+K L    C                 
Sbjct: 359 TLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQC----------------- 401

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                 L   + P +  L  L  LDL    L   A+P+++G L ++K L LS     TLP
Sbjct: 402 ------LLHTLPPEVGRLTQLEWLDLRSNPLH--ALPAEVGQLTNVKHLDLSHCQLHTLP 453

Query: 184 ASINCLFNL 192
             +  L  L
Sbjct: 454 PEVGRLTQL 462


>gi|147841724|emb|CAN64358.1| hypothetical protein VITISV_040361 [Vitis vinifera]
          Length = 439

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 110/256 (42%), Gaps = 50/256 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGC-------------KNLVRL------ 41
           M+ L EL L  T IK++P SI  L  L  L L  C             KNL +L      
Sbjct: 1   MKSLEELDLRNTAIKDLPDSIGDLESLWLLDLSDCSKFEKFPEKGGNMKNLTKLLLKNTA 60

Query: 42  ----PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
               P +I  L+ L+ L+L  C KFE   E  G+++SL EL +  TAI+  P +I  +++
Sbjct: 61  IKDLPDSIGDLEYLEFLDLSDCSKFEKFPEKGGKMKSLMELHLKNTAIKGLPDNIGDLES 120

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEG 157
           L+ L    C       S +  FP                    + SL  LDL +      
Sbjct: 121 LEFLDLSAC-------SKFEKFP---------------EKGGNMKSLIHLDLKNT----- 153

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           A+P++I  L +L  L L   + +      N L NL+KL +  CK    +  LP +++++ 
Sbjct: 154 ALPTNISRLKNLARLILGGCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLQEID 213

Query: 218 VNGCASLVTLLGALKL 233
              C S   L G L L
Sbjct: 214 ALHCTSKEDLSGLLWL 229


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 121/249 (48%), Gaps = 15/249 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L+K  +  +P SI LL  L  L  +  + L  +P  I  LK+LK L++ G  
Sbjct: 160 LQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNR-LQSIPEEIGQLKNLKYLSVDGNH 218

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS--FRGCNG-PPSSASCYL 117
               + E++G++E L+EL +S   +   P+SI  +K LK L   +    G PP       
Sbjct: 219 -LAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQH 277

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              INL         + +  L+ L SL  LD +       ++P+++GNL  L+ L L+ N
Sbjct: 278 LKDINLSHNRITTFPIAITKLTQLKSLA-LDSNQL----TSLPANVGNLEQLEVLSLNDN 332

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLP---QLPPNVEKVRVNGCASLVTLLGALKLR 234
             + LP SI  L NL  L L + K L  +P   Q  PN+E + + G       L  ++ R
Sbjct: 333 QLIKLPKSIGKLTNLTTLSLINNK-LTDVPIEIQNLPNLEYLVLEGNPISKKKLKKIQKR 391

Query: 235 KSSCTIIDF 243
             +CT IDF
Sbjct: 392 LPNCT-IDF 399



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 82/179 (45%), Gaps = 16/179 (8%)

Query: 36  KNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLM 95
           + L  LP  I+ L  L  L + G  K E L  T+ +++ LEEL  +   +   P SI  +
Sbjct: 33  QQLTSLPKGIDRLPGLLVLGVSGN-KIEVLPSTIDKLQQLEELWFNHNHLHTLPESIGKL 91

Query: 96  KNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-----GALMLP-SLSGLGSLTKLDL 149
           K L  L          +    LP  I  +    DL        +LP S+  L  L  L+L
Sbjct: 92  KKLHELWLN------HNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNL 145

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
               L E  +P  I  L +LK+LYL+KN    LP SI  L NL+ L  +   RLQS+P+
Sbjct: 146 GHNDLIE--LPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQ-SNRLQSIPE 201



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 28/207 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L EL  +   +  +P SI  L  L +L L    +L +LP +I  L  L+ L  L   
Sbjct: 68  LQQLEELWFNHNHLHTLPESIGKLKKLHELWL-NHNHLTKLPESIGELDHLEDL-WLDHN 125

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E++G++E L  L++    +   P SI  ++NLK+L          +    LP  
Sbjct: 126 QLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLN------KNKLAVLPES 179

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I L++                 +L  LD     L   +IP +IG L +LK L +  N+  
Sbjct: 180 IGLLQ-----------------NLQYLDAQSNRLQ--SIPEEIGQLKNLKYLSVDGNHLA 220

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLP 207
            +P SI  L +L++L L    RL  LP
Sbjct: 221 VVPESIGELEHLKELHLSH-NRLTFLP 246


>gi|390989305|ref|ZP_10259604.1| leucine Rich Repeat family protein [Xanthomonas axonopodis pv.
           punicae str. LMG 859]
 gi|372556063|emb|CCF66579.1| leucine Rich Repeat family protein [Xanthomonas axonopodis pv.
           punicae str. LMG 859]
          Length = 476

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 37/217 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 76  LQHMTIDAAGLMELPDTMQQFAGLETLTL--ARNPLRALPASIASLSRLRELSIRACPEL 133

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +   ++         L+ L +  T I   P+SI  ++NLK+L  R  N P S+ 
Sbjct: 134 TELPEHLASTDASGEHQGLVNLQSLRLERTGITSLPASIANLQNLKSLKIR--NSPLSA- 190

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                           LG    P++  L  L +LDL  C     + P   G    LK L 
Sbjct: 191 ----------------LG----PAIHQLPKLEELDLRGCT-ALRSYPPIFGGSAPLKRLI 229

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           L   +N +TLP  I+ L  LEKL L  C  L  LP L
Sbjct: 230 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 266


>gi|168068813|ref|XP_001786216.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661901|gb|EDQ48971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 29/230 (12%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L  L+++K + +  +P  + +L+ L  L +K C +L  LP+ + +L SL TLN+ GC   
Sbjct: 2   LTTLIINKCSSLTSLPNELGMLTSLTTLNMKSCGSLTSLPNELGNLTSLTTLNIRGCSSL 61

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
             L   +G + SL  LDI G +++   P+ +  + +L TL+   C+              
Sbjct: 62  TTLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNMEWCS-------------- 107

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
           NL    ++LG L         SLT L++  C      +P+++GNL SL TL + + ++ +
Sbjct: 108 NLTLLPNELGMLT--------SLTTLNMKCCK-SLILLPNELGNLTSLTTLNIRECSSLI 158

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
           TLP  +  L +L  L +  C  L SLP    N+     + +  C+SL TL
Sbjct: 159 TLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNIRECSSLTTL 208



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 50/208 (24%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGT 83
           L+ L  L + GC +L  LP+ + +L SL TLN+  C     L   +G V SL  L I   
Sbjct: 167 LTSLTILDIYGCSSLTSLPNELGNLTSLTTLNIRECSSLTTLPNELGNVTSLTTLHIG-- 224

Query: 84  AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGS 143
                                 CN   S     LP         ++LG         L S
Sbjct: 225 ---------------------WCNKLTS-----LP---------NELG--------NLTS 241

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKR 202
           LT LD+  C     ++P+++GNL SL  L +   +   +LP  +  L +L  L ++ CK 
Sbjct: 242 LTTLDMGLCT-KLTSLPNELGNLTSLTRLNIEWCSRLTSLPNELGMLTSLTTLNMKCCKS 300

Query: 203 LQSLPQLPPNVEKVR---VNGCASLVTL 227
           L SLP    N+  +    + GC+SL +L
Sbjct: 301 LTSLPNELGNLISLTILDIYGCSSLTSL 328



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  + +L+ L  L +K CK+L  LP+ + +L SL  L++ GC    +L   +G V 
Sbjct: 277 LTSLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYGCSSLTSLPNELGNVT 336

Query: 74  SLEELDI 80
           SL  LD+
Sbjct: 337 SLTTLDM 343



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 14/157 (8%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDIS-G 82
           L+ L  L ++ C +L  LP+ + ++ SL TL++  C K  +L   +G + SL  LD+   
Sbjct: 191 LTSLTTLNIRECSSLTTLPNELGNVTSLTTLHIGWCNKLTSLPNELGNLTSLTTLDMGLC 250

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLG 142
           T +   P+ +  + +L  L+   C+   S     LP  + ++   + L      SL+ L 
Sbjct: 251 TKLTSLPNELGNLTSLTRLNIEWCSRLTS-----LPNELGMLTSLTTLNMKCCKSLTSLP 305

Query: 143 -------SLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
                  SLT LD+  C     ++P+++GN+ SL TL
Sbjct: 306 NELGNLISLTILDIYGCS-SLTSLPNELGNVTSLTTL 341


>gi|108738504|gb|ABG00785.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF 103
               L E +G +  L+EL + GTAI+  P SI  ++NL+ LS 
Sbjct: 136 DLSVLPENIGAMTXLKELLLDGTAIKNLPXSIXRLQNLEXLSL 178


>gi|168008214|ref|XP_001756802.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692040|gb|EDQ78399.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 250

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 27/215 (12%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++++P SI  L+ L ++ L GC N+  LPS + +L  L+ LNL  C     L   +G + 
Sbjct: 35  VRQLPKSIGQLANLCEMDLSGCTNITTLPSEVGNLVGLEKLNLSRCKCLIRLPPELGSLP 94

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L  LD+S + I   P  +  ++ L++LS  GC              + L +   D+G L
Sbjct: 95  KLTTLDLSKSGITALPPEVGKLETLESLSLSGC--------------VRLEKLPKDIGKL 140

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL-SKNNFVTLPASINCLFNL 192
                  LGS T L           +P +IG L SL+ L L S  + V LP  +  +  L
Sbjct: 141 STLRQLNLGSCTSLK---------DLPHEIGKLKSLQKLSLNSCTSLVRLPEELFQIVTL 191

Query: 193 EKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASL 224
           + L L+ CK +  L     N   +E++ +N C  L
Sbjct: 192 QALDLDYCKLVAHLSSEIRNLKSLERLSLNCCTKL 226



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 29/205 (14%)

Query: 28  VQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIR 86
           ++L L  C  L  L +   SLKSL+   L  C     L +++GQ+ +L E+D+SG T I 
Sbjct: 1   LELHLLSCNKLQHLTNGFGSLKSLRRFRLENCVGVRQLPKSIGQLANLCEMDLSGCTNIT 60

Query: 87  CPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTK 146
             PS +  +  L+ L+   C        C +  P               P L  L  LT 
Sbjct: 61  TLPSEVGNLVGLEKLNLSRCK-------CLIRLP---------------PELGSLPKLTT 98

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQS 205
           LDLS  G+   A+P ++G L +L++L LS       LP  I  L  L +L L  C  L+ 
Sbjct: 99  LDLSKSGI--TALPPEVGKLETLESLSLSGCVRLEKLPKDIGKLSTLRQLNLGSCTSLKD 156

Query: 206 LPQ---LPPNVEKVRVNGCASLVTL 227
           LP       +++K+ +N C SLV L
Sbjct: 157 LPHEIGKLKSLQKLSLNSCTSLVRL 181


>gi|108738543|gb|ABG00804.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T I+ +P  I  L  + +L L+ CK L  LP +I  + +L +LNL G    E L E  G+
Sbjct: 298 TPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGK 356

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC---NGPPSSASC-------YLPFP 120
           +E L EL +S    ++  P S   +K+L  L  +       P S  +         L  P
Sbjct: 357 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 416

Query: 121 INLMRRSSDLGALMLP-------SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +  +  S+  G    P       S S L  L +LD     +  G IP D+  L  L  L 
Sbjct: 417 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLN 475

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASL 224
           L  N F +LP+S+  L NL++L L DC+ L+ LP LP  +E++ +  C SL
Sbjct: 476 LGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 14/213 (6%)

Query: 2   ECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           E L +L+ ++ T + ++P S+  L  L+ L  + C  L     +++ LK L+ L L GC 
Sbjct: 76  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS 135

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L E  G +    EL + GTAI+  P SI  ++NL  LS RG           LP  
Sbjct: 136 DLSVLPEXXGAMTXXXELLLXGTAIKNLPESINRLQNLXILSLRG------XKXXELPLC 189

Query: 121 INLMRRS-----SDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
               +        D     LPS  G L +L  L L  C      IP  I  L SLK L++
Sbjct: 190 XXXXKSXEKLYLDDTALXNLPSSIGDLKNLQDLHLXRCT-SLSKIPDSINELKSLKKLFI 248

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           + +    LP   + L +L      DCK L+ +P
Sbjct: 249 NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281


>gi|297818518|ref|XP_002877142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322980|gb|EFH53401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 109/220 (49%), Gaps = 29/220 (13%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           +L D + + E+P SI+ L+ L    ++ C+NL  LP+ IN L+SL  LNL+GC + ++  
Sbjct: 660 VLNDCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGIN-LQSLYDLNLMGCSRLKSFP 718

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFL--MKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
           +    + +   LD+ GT I   PS++ L  + NL+    R                  L 
Sbjct: 719 DISSNIST---LDLYGTTIEELPSNLHLENLVNLRMCEMRSG---------------KLW 760

Query: 125 RRSSDLGALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
            R   L  L L  +S   SLT++ LS+   L E  +PS I NLH L+ L +    N  TL
Sbjct: 761 EREQPLTPL-LKMVS--PSLTRIYLSNIPTLVE--LPSSIHNLHKLEELSIWNCKNLETL 815

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
           P  IN L +L  L L  C +L+  P +  N+ ++ +N  A
Sbjct: 816 PTGIN-LKSLYSLDLSGCSQLRCFPDISTNISELFLNETA 854


>gi|421083712|ref|ZP_15544583.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421101927|ref|ZP_15562537.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410368072|gb|EKP23450.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433629|gb|EKP77969.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983304|gb|EMG19635.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 221

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 16/210 (7%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L+ L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQKLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD+ G      P  I  ++NL+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAG------NQLTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 SL   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 189 LFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           L NL+ L+L       K  Q + +L PN E
Sbjct: 177 LQNLQVLRLYSNSFSLKEKQKIQELLPNCE 206



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 25/141 (17%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           +G  + E+L   +G  ++LE+L++ G  +   P  I  ++ L+ L+  G        + +
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAG--------NQF 52

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              P        ++G L         +L +LDL   G    ++P +IG L +L+ L L+ 
Sbjct: 53  TSLP-------KEIGQLQ--------NLERLDLD--GNQFTSLPKEIGQLQNLRVLNLAG 95

Query: 177 NNFVTLPASINCLFNLEKLKL 197
           N   +LP  I  L NLE+L L
Sbjct: 96  NQLTSLPKEIGQLQNLERLDL 116



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L  L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           +L L D  +  SLP+    ++ +RV     N   SL   +G L+
Sbjct: 67  RLDL-DGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQ 109


>gi|45658729|ref|YP_002815.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45601973|gb|AAS71452.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 272

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 16/210 (7%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L+ L+ LNL G  +F +L + +GQ+
Sbjct: 56  ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQKLRVLNLAGN-QFTSLPKEIGQL 113

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD+ G      P  I  ++NL+ L+  G      +    LP  I  ++     DL
Sbjct: 114 QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAG------NQLTSLPKEIGQLQNLERLDL 167

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 SL   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 168 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 227

Query: 189 LFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           L NL+ L+L       K  Q + +L PN E
Sbjct: 228 LQNLQVLRLYSNSFSLKEKQKIQELLPNCE 257



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 25/141 (17%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           +G  + E+L   +G  ++LE+L++ G  +   P  I  ++ L+ L+  G        + +
Sbjct: 52  MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAG--------NQF 103

Query: 117 LPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
              P        ++G L         +L +LDL   G    ++P +IG L +L+ L L+ 
Sbjct: 104 TSLP-------KEIGQLQ--------NLERLDLD--GNQFTSLPKEIGQLQNLRVLNLAG 146

Query: 177 NNFVTLPASINCLFNLEKLKL 197
           N   +LP  I  L NLE+L L
Sbjct: 147 NQLTSLPKEIGQLQNLERLDL 167



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L  L+ L L+ N F +LP  I  L NLE
Sbjct: 60  LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLE 117

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           +L L D  +  SLP+    ++ +RV     N   SL   +G L+
Sbjct: 118 RLDL-DGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQ 160


>gi|295083305|gb|ADF78106.1| rj2 protein [Glycine max]
          Length = 1052

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 120/293 (40%), Gaps = 52/293 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ EL 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRELC 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           +S ++I       F  +NL  L     +     A   +P  I LM   +++  + L    
Sbjct: 734 LSNSSI---TELSFSFQNLAGLQALDLSFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQ 790

Query: 140 GL--------------GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPAS 185
            L                + +L ++ C L +     D      +K L LS+NNF  LP  
Sbjct: 791 WLKQEEGEEKTGSIVSSKVVRLTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPEC 850

Query: 186 IN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFV 244
           I  C F L  L + DCK L+ +  +PPN++      C SL           +S +I  F+
Sbjct: 851 IKECQF-LRILDVCDCKHLREIRGIPPNLKHFFAINCKSL-----------TSSSISKFL 898

Query: 245 DSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
           +                   E+  A +  F +  PG  IP+WF  Q+ G SI+
Sbjct: 899 NQ------------------ELHEAGNTVFCL--PGKRIPEWFDQQSRGPSIS 931


>gi|260810360|ref|XP_002599932.1| hypothetical protein BRAFLDRAFT_74056 [Branchiostoma floridae]
 gi|229285216|gb|EEN55944.1| hypothetical protein BRAFLDRAFT_74056 [Branchiostoma floridae]
          Length = 1150

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 54/261 (20%)

Query: 8   LLDKTD--IKEMPLSIELLSGLVQLTLKGCK-----------------------NLVRLP 42
           +LD +D  I  +P++I  LS L ++   GC                        ++  LP
Sbjct: 32  ILDVSDNPIGSIPVNIASLSNLTEMRAAGCDLREVSGNVSRCTYLRKIDFSRNPHIATLP 91

Query: 43  SNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL- 101
           + +  L+ LK + L GC +  +L + +  + ++E LD+S  A+   PS I  +K +K L 
Sbjct: 92  ATMKQLRYLKCVALSGC-ELTSLPKNLTLLATIETLDLSKNALESLPSDISGLKQVKVLI 150

Query: 102 ----SFRGC--------------------NGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
               +FR                      N         +P  + ++    +    ++P 
Sbjct: 151 LSDNAFRTIPEFIRSLGLLDCLEMKRNKLNNHQGDLVLNVPAKLKILDLEDNCSLSLVPD 210

Query: 138 -LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
            L  L  +  L+ S CG+    +P  IG + +LK ++L+ N   TLP S   L NLE L 
Sbjct: 211 GLENLEVIESLNFSYCGVE--TLPDSIGQISTLKKIHLAGNKLRTLPDSFGRLLNLETLD 268

Query: 197 LEDCKRLQSLPQLPPNVEKVR 217
           LE  +RL SLP    N+ K++
Sbjct: 269 LEGNRRLSSLPLTLHNLRKLK 289



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 26/161 (16%)

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC----YL 117
            E +   V  ++ +E LD+S   I   P +I  + NL  +   GC+    S +     YL
Sbjct: 17  LEEIPPNVFSIKEVEILDVSDNPIGSIPVNIASLSNLTEMRAAGCDLREVSGNVSRCTYL 76

Query: 118 --------PFPINLMRRSSDLGALMLPSLSG------------LGSLTKLDLSDCGLGEG 157
                   P    L      L  L   +LSG            L ++  LDLS   L   
Sbjct: 77  RKIDFSRNPHIATLPATMKQLRYLKCVALSGCELTSLPKNLTLLATIETLDLSKNAL--E 134

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLE 198
           ++PSDI  L  +K L LS N F T+P  I  L  L+ L+++
Sbjct: 135 SLPSDISGLKQVKVLILSDNAFRTIPEFIRSLGLLDCLEMK 175


>gi|13517477|gb|AAK28810.1|AF310964_1 resistance-like protein P4-B [Linum usitatissimum]
          Length = 1202

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 90/351 (25%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL-LETVGQVES 74
            E+P  ++ L+ LV L +  C+NL  LP  ++S        LL   + +NL +    +++S
Sbjct: 730  EVPSHVQYLTKLVTLDISHCENLKPLPPKLDS-------KLLKHVRMKNLEITRCPEIDS 782

Query: 75   --LEELDISGTAIRCPPSSIF--------------------LMKNLKTLSFRGCNGPPSS 112
              LEE D+SGT++   PS+I+                    +   L+  +  G +     
Sbjct: 783  RELEEFDLSGTSLGELPSAIYNVKQNGYLHLHGKNITKFPGITTTLERFTLSGTSIREID 842

Query: 113  ASCY-----------------LPFPI-NLMRRSSDLG----ALMLPSLSG-LGSLTKLDL 149
             + Y                 LP  I N++     +G       LP +S  + +LT L +
Sbjct: 843  FADYHQQHQNLWLTDNRQLEVLPNGIWNMISEQLWIGWSPLIESLPEISEPMNTLTSLHV 902

Query: 150  SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQ----- 204
              C     +IP+ I NL SL +L LS+    +LP+SI  L  L   +L  C+ L+     
Sbjct: 903  Y-CCRSLTSIPTSISNLRSLGSLCLSETGIKSLPSSIQELRQLHFFELRYCESLESIPNS 961

Query: 205  -------------------SLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVD 245
                               SLP+LPPN++++ V+ C SL  L        ++C ++ +++
Sbjct: 962  IHKLSKLVTLSMSGCEIIISLPELPPNLKELDVSRCKSLQALPS------NTCKLL-YLN 1014

Query: 246  SLKLLGKNGLAISMLREFLE--VVSA---PSHKFSIVVPGSEIPKWFMYQN 291
             +   G   L  ++  EF+   +V A   PSH   +   GSE+P+WF Y++
Sbjct: 1015 LIHFEGCPQLDQAIPAEFVANFLVHASLSPSHDRQVRCSGSELPEWFSYRS 1065



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L  L L +T IK +P SI+ L  L    L+ C++L  +P++I+ L  L TL++ GC 
Sbjct: 918  LRSLGSLCLSETGIKSLPSSIQELRQLHFFELRYCESLESIPNSIHKLSKLVTLSMSGC- 976

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
              E ++       +L+ELD+S   +++  PS+   +  L  + F GC
Sbjct: 977  --EIIISLPELPPNLKELDVSRCKSLQALPSNTCKLLYLNLIHFEGC 1021


>gi|449437958|ref|XP_004136757.1| PREDICTED: putative disease resistance protein RGA4-like [Cucumis
           sativus]
 gi|449511500|ref|XP_004163971.1| PREDICTED: putative disease resistance protein RGA4-like [Cucumis
           sativus]
          Length = 822

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 24/216 (11%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L  TD++E+P +IE L+ L  L L+G KN+ RLP+ I +L+ L+TL L  C   E
Sbjct: 576 LRLLYLGHTDLQEIPNTIETLNHLTYLDLQGNKNIKRLPNAICNLQHLQTLILASCSALE 635

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L + + ++ +L  L ++   +R   + +  M +L+ L+  GC+              +L
Sbjct: 636 ELPKDICKLSNLRYLWVTSNKLRLHKNGVGTMTSLRFLAIGGCDKLQ-----------DL 684

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
             R            S L  L  L + DC      +P+++G+L SL+ L +     +TL 
Sbjct: 685 FERP-----------SCLVRLETLMIYDCN-SLQLLPNEMGSLISLQNLVIWSCKQLTLK 732

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQ-LPPNVEKVRV 218
                 F+L++  + +   +  LP+ L  + E +RV
Sbjct: 733 GLEKVDFSLQRFTIRELPEVNKLPEWLQRSTETLRV 768


>gi|356548855|ref|XP_003542814.1| PREDICTED: uncharacterized protein LOC100817561 [Glycine max]
          Length = 345

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 47/264 (17%)

Query: 89  PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG--ALMLPSLSGLGSLTK 146
           PSSI  ++ L+ LS   C G            +   ++  D+   +L++PS      L +
Sbjct: 5   PSSIVTLRELEVLSICQCEG------------LRFSKQDEDVKNKSLLMPS----SYLKQ 48

Query: 147 LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
           ++L  C + +  I + +    ++K+L LS NNF  LP+ I     L KL L+ C  L  +
Sbjct: 49  VNLWSCSISDEFIDTGLAWFANVKSLDLSANNFTILPSCIQECRLLRKLYLDYCTHLHEI 108

Query: 207 PQLPPNVEKVRVNGCASLVTLLGALKLR--KSSCT----IIDFVDSLK-----------L 249
             +PPN+E +    C SL  L  A+ L   K  C     I+D  ++L+           L
Sbjct: 109 RGIPPNLETLSAIRCTSLKDLDLAVPLESTKEGCCLRQLILDDCENLQEIRGIPPSIEFL 168

Query: 250 LGKN--GLAISMLREFL--EVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLC 305
              N   L  S  R  L  E+  A + ++S+  PG+ IP+WF + + G SI+     +  
Sbjct: 169 SATNCRSLTASCRRMLLKQELHEAGNKRYSL--PGTRIPEWFEHCSRGQSISF----WFR 222

Query: 306 NMNQVVGYAACRVFHVPKHSTGIR 329
           N   V+      + H  KH  G++
Sbjct: 223 NKFPVISLCLAGLMH--KHPFGLK 244


>gi|251748502|gb|ACT11053.1| TIR-NB-LRR resistance protein [Arachis diogoi]
          Length = 1095

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 169/396 (42%), Gaps = 60/396 (15%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            E L  L L  + ++++   I+ L  L  L       L   P +++   +L+ L+   C +
Sbjct: 650  EKLVILELPYSQVEKLWYGIQNLVNLKVLKAPYSSQLKEFP-DLSKATNLEILDFKYCLR 708

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
               +  +V  +  LE LD+S  +      +   +K+L+ LS   C               
Sbjct: 709  LTRVHPSVFSLNKLETLDLSWCSQLAKLETNAHLKSLRYLSLYHC--------------- 753

Query: 122  NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
               +R +    +         ++T+LDL    + E  +PS  G    L+ L+L+ +    
Sbjct: 754  ---KRLNKFSVIS-------ENMTELDLRHTSIRE--LPSSFGCQSKLEKLHLANSEVKK 801

Query: 182  LPA-SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL---GALKLRKSS 237
            +PA S+  L +L+ L + DCK LQ+LP+LP ++E +  + C SL  +L    + +L+++ 
Sbjct: 802  MPADSMKLLTSLKYLDISDCKNLQTLPELPLSIETLDADNCTSLKAVLFPNASEQLKENK 861

Query: 238  CTIIDFVDSLKLLGK--NGLA----ISMLREFLEVVSAPSH----------KFSIVVPGS 281
               + F + LKL  +  N +A    I+M+R   + +SA  H          + S V P S
Sbjct: 862  KKAV-FWNCLKLENQFLNAVALNAYINMVRFSNQYLSAIGHDNVDNSNEDPEASYVYPRS 920

Query: 282  EIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYAACRVFHVPK-HSTGIRRFY------RY 334
            ++P W  YQ     +TV   S        +G+  C  F VP   S G R  +      + 
Sbjct: 921  KVPNWLEYQTNMDHLTVNLSS--APYAPKLGFILC--FIVPAVPSEGFRLMFTISGDDQE 976

Query: 335  PHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYYCN 370
                + +   +D        DH+ L+Y  R S + N
Sbjct: 977  EDDVNEVRLYVDRPRKEISWDHVILIYDQRCSSFLN 1012


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 30/209 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L L    +  +P ++  L  L  L L     L  LP  +  L+SL +LNL    
Sbjct: 414 LQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTSLNLRSN- 471

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E VGQ++SL  LD+S   +   P  +  +++L +L  R                
Sbjct: 472 QLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLR---------------- 515

Query: 121 INLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                 S+ L  L  P + G L SLT LDLS   L    +P  +G L SL +LYL  N  
Sbjct: 516 ------SNQLSTL--PEVVGQLQSLTSLDLSSNQLS--TLPEVVGQLQSLTSLYLRSNQL 565

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            TLP  I  L +L  L L D  +L  LP+
Sbjct: 566 STLPEVIGQLQSLTSLDLSD-NQLSELPR 593



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 17/215 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L L    +  +P  +  L  L  L L     L  LP  +  L+SL +LNL    
Sbjct: 184 LQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDL-SFNQLSTLPEVVGQLQSLTSLNL-SSN 241

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E VGQ++SL  LD+S   +   P  +  +++L +L  R      S+    LP  
Sbjct: 242 QLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLR------SNQLSTLPEA 295

Query: 121 INLMRR--SSDLGALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           +  ++   S DL +  L +L      L SLT L+L    L    +P  +G L SL +LYL
Sbjct: 296 VGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLS--TLPEVVGQLQSLTSLYL 353

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           S N   TLP ++  L +L  L L    +L +LP++
Sbjct: 354 SSNQLSTLPEAVGQLQSLTSLNLS-SNQLSTLPEV 387



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 17/240 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L L    +  +P  +  L  L  L L     L  LP  +   +SL +LNL    
Sbjct: 116 LQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDL-SSNQLSTLPEVVGQ-QSLTSLNLRSN- 172

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT--LSFRGCNGPPSSASCYLP 118
           +   L E VGQ++SL  LD+S   +   P  +  +++L +  LSF   +  P      L 
Sbjct: 173 QLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVG-QLQ 231

Query: 119 FPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              +L   S+ L    LP + G L SLT LDLS   L    +P  +G L SL +LYL  N
Sbjct: 232 SLTSLNLSSNQLST--LPEVVGQLQSLTSLDLSSNQL--STLPEVVGQLQSLTSLYLRSN 287

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE-----KVRVNGCASLVTLLGALK 232
              TLP ++  L +L  L L    +L +LP++   ++      +R N  ++L  ++G L+
Sbjct: 288 QLSTLPEAVGQLQSLTSLDLS-SNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQ 346



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 98/205 (47%), Gaps = 20/205 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L L    +  +P  +  L  L  L L+  + L  LP  +  L+SL +L+L    
Sbjct: 437 LQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQ-LSTLPEAVGQLQSLTSLDL-SSN 494

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E VGQ++SL  LD+    +   P  +  +++L +L         S+    LP  
Sbjct: 495 QLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDL------SSNQLSTLPEV 548

Query: 121 I-------NLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTL 172
           +       +L  RS+ L  L  P + G L SLT LDLSD  L E  +P  I  L +L +L
Sbjct: 549 VGQLQSLTSLYLRSNQLSTL--PEVIGQLQSLTSLDLSDNQLSE--LPRQICQLDTLCSL 604

Query: 173 YLSKNNFVTLPASINCLFNLEKLKL 197
           +L  N    LPA ++ L +LEKL L
Sbjct: 605 FLGGNFLEQLPAELSRLLHLEKLSL 629



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 23/209 (11%)

Query: 14  IKEMPLSIELLSGLVQLTL--------KGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
           I E+P  I  L+ L  L L        +   NL  LP  I  L  L++L  L   +FE +
Sbjct: 28  IDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSL-FLAYNQFEEI 86

Query: 66  LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
            E VG++  L  L++S   +   P  +  +++L +L  R      S+    LP  +  ++
Sbjct: 87  PEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLR------SNQLSTLPEVVGQLQ 140

Query: 126 R--SSDLGA---LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              S DL +     LP + G  SLT L+L    L    +P  +G L SL +L LS N   
Sbjct: 141 SLTSLDLSSNQLSTLPEVVGQQSLTSLNLRSNQL--STLPEVVGQLQSLTSLDLSSNQLS 198

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           TLP  +  L +L  L L    +L +LP++
Sbjct: 199 TLPEVVGQLQSLTSLDLS-FNQLSTLPEV 226



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 23/210 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML-- 135
           LD++G  I   P  I  +  LKTL     +         L    + + R ++L +L L  
Sbjct: 21  LDLAGMGIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFLAY 80

Query: 136 ------PSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 P + G L  L  L+LS   L    +P  +G L SL +LYL  N   TLP  +  
Sbjct: 81  NQFEEIPEVVGRLRKLRSLNLSSNQLS--TLPEVVGQLQSLTSLYLRSNQLSTLPEVVGQ 138

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVE----KVRVNGCASLVTLLGALK----LRKSS--- 237
           L +L  L L    +L +LP++          +R N  ++L  ++G L+    L  SS   
Sbjct: 139 LQSLTSLDLS-SNQLSTLPEVVGQQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQL 197

Query: 238 CTIIDFVDSLKLLGKNGLAISMLREFLEVV 267
            T+ + V  L+ L    L+ + L    EVV
Sbjct: 198 STLPEVVGQLQSLTSLDLSFNQLSTLPEVV 227


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 17/223 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L +  +  +P  I  L  L +L L+G + L  LP  I +L++L+TL+L G  
Sbjct: 157 LQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQ-LATLPEEIGNLQNLQTLDLEGN- 214

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G++++L++L +    +   P  I  ++NLK LS  G N         LP  
Sbjct: 215 QLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSL-GNN-----QLTTLPKE 268

Query: 121 I----NL--MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           +    NL  M+ S +    +   +  L +L +L L+   L   A+P +IGNL +L+ LYL
Sbjct: 269 VGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLT--ALPKEIGNLQNLQQLYL 326

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             N   TLP  I  L NL+ L L + K L + P+   N++K++
Sbjct: 327 YGNQLTTLPIEIGNLQNLQGLHLGNNK-LTAFPKEIGNLQKLK 368



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 44/234 (18%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +  +P  I  L  L QL L G + L  LP  I +L++L+ L+L G  
Sbjct: 295 LQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQ-LTTLPIEIGNLQNLQGLHL-GNN 352

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K     + +G ++ L+ L ++   +   P  I  ++NLK L+                  
Sbjct: 353 KLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNL----------------- 395

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                 SS+    +   +  L +L  LDL++  L   A+P +IGNL +LK L L+ N   
Sbjct: 396 ------SSNQLTTIPKEIENLQNLQVLDLNNNQLT--ALPKEIGNLQNLKELDLTSNRLT 447

Query: 181 TLPASINCLFNLEKL---------------KLEDCK--RLQSLPQLPPNVEKVR 217
           TLP  I  L +LE L               KL+  K  RL+++P L P  EK+R
Sbjct: 448 TLPKEIGNLQSLESLDLSNNPLTSFPEEIGKLQHLKRLRLENIPTLLPQKEKIR 501



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 23/210 (10%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L  L L     L+ LP  I  L+ L+ LNL    +  NL E +G++++L+
Sbjct: 127 LPKEIGKLQNLRDLDL-SSNQLMTLPKEIGKLQKLQKLNLTRN-RLANLPEEIGKLQNLQ 184

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML- 135
           ELD+ G  +   P  I  ++NL+TL   G      +    LP  I  ++   +L  L L 
Sbjct: 185 ELDLEGNQLATLPEEIGNLQNLQTLDLEG------NQLTTLPKEIGKLQ---NLKKLYLY 235

Query: 136 --------PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
                     +  L +L  L L +  L    +P ++G L +L+ +  SKN   TLP  I 
Sbjct: 236 NNRLTTFPKEIEDLQNLKILSLGNNQL--TTLPKEVGKLQNLQEMKSSKNQLTTLPKEIG 293

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            L NL++L L    +L +LP+   N++ ++
Sbjct: 294 NLQNLQELYLAH-NQLTALPKEIGNLQNLQ 322



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 17/224 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L+   +  +P  I  L  L +L L   + L   P  I  L++LK L+L G  
Sbjct: 203 LQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNR-LTTFPKEIEDLQNLKILSL-GNN 260

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + VG++++L+E+  S   +   P  I  ++NL+ L          +    LP  
Sbjct: 261 QLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYL------AHNQLTALPKE 314

Query: 121 INLMRRSSDL-----GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++    L         LP  +  L +L  L L +  L   A P +IGNL  LK L L
Sbjct: 315 IGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLT--AFPKEIGNLQKLKWLGL 372

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           +KN   T+P  I  L NL++L L    +L ++P+   N++ ++V
Sbjct: 373 NKNQLTTIPKEIGNLQNLKELNL-SSNQLTTIPKEIENLQNLQV 415



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 17/223 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L    +   P  IE L  L  L+L G   L  LP  +  L++L+ +      
Sbjct: 226 LQNLKKLYLYNNRLTTFPKEIEDLQNLKILSL-GNNQLTTLPKEVGKLQNLQEMKS-SKN 283

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L+EL ++   +   P  I  ++NL+ L   G      +    LP  
Sbjct: 284 QLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYG------NQLTTLPIE 337

Query: 121 INLMR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGEG---AIPSDIGNLHSLKTLYL 174
           I  ++  +   LG   L +    +G+L KL     GL +     IP +IGNL +LK L L
Sbjct: 338 IGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKW--LGLNKNQLTTIPKEIGNLQNLKELNL 395

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           S N   T+P  I  L NL+ L L +  +L +LP+   N++ ++
Sbjct: 396 SSNQLTTIPKEIENLQNLQVLDLNN-NQLTALPKEIGNLQNLK 437



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 125 RRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           R+ S+     LP   G L +L  LDLS   L    +P +IG L  L+ L L++N    LP
Sbjct: 117 RKHSNDPLWTLPKEIGKLQNLRDLDLSSNQLM--TLPKEIGKLQKLQKLNLTRNRLANLP 174

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
             I  L NL++L LE   +L +LP+   N++ ++ 
Sbjct: 175 EEIGKLQNLQELDLE-GNQLATLPEEIGNLQNLQT 208


>gi|15237438|ref|NP_199457.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177582|dbj|BAB10813.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008004|gb|AED95387.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1123

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 70/333 (21%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T + E+  +I+ L+ L +L ++ C+NL  LP  IN L+SL  LNL GC K  +  +    
Sbjct: 662 TSLVELSSTIQNLNQLEELQMERCENLENLPIGIN-LESLYCLNLNGCSKLRSFPDIST- 719

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
             ++ EL +S TAI   P+ +    +L+ L + G     S           L +R   L 
Sbjct: 720 --TISELYLSETAIEEFPTEL----HLENLYYLGLYDMKSEK---------LWKRVQPLT 764

Query: 132 ALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
            LM   LS   SLTKL LSD   L E  +PS   NLH+L+ L +++  N  TLP  +N L
Sbjct: 765 PLM-TMLSP--SLTKLFLSDIPSLVE--LPSSFQNLHNLEHLNIARCTNLETLPTGVN-L 818

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA--------------SLVTLLGALKLRK 235
             LE+L    C RL+S P +  N+  + ++G                S ++++G   L+ 
Sbjct: 819 ELLEQLDFSGCSRLRSFPDISTNIFSLVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNLQG 878

Query: 236 SSCTI--------IDFVDSLKLLGKNG----LAISMLREFLEVVSAPSHKFS-------- 275
            S  I        +DF D   L   N      A++M  E +        KFS        
Sbjct: 879 VSLNISKLEKLETVDFSDCEALSHANWDTIPSAVAMATENIHSKLPVCIKFSNCFNLDHK 938

Query: 276 -----------IVVPGSEIPKWFMYQNEGSSIT 297
                      +++ G E+  +F ++  G+S+T
Sbjct: 939 AVLLQQSIFKQLILSGGEMFSYFTHRTTGTSLT 971



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 7   LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L D   + E+P S + L  L  L +  C NL  LP+ +N L+ L+ L+  GC +  +  
Sbjct: 778 FLSDIPSLVELPSSFQNLHNLEHLNIARCTNLETLPTGVN-LELLEQLDFSGCSRLRSFP 836

Query: 67  ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN 107
           +    + SL    + GT I   P  I     L  LS  GCN
Sbjct: 837 DISTNIFSLV---LDGTGIEEVPWWIEDFYRLSFLSMIGCN 874


>gi|297790452|ref|XP_002863116.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308940|gb|EFH39375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1090

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 129/308 (41%), Gaps = 66/308 (21%)

Query: 39  VRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCP-PSSIFLMKN 97
           ++LPS+I +L +LK L+L        L  ++G + +L+ELD+S  +     P SI    N
Sbjct: 655 IKLPSSIGNLINLKELDLSSLSCLVELPSSIGNLINLKELDLSSLSCLVELPFSIGNATN 714

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL------MLPSLSGLGSLTKLDLSD 151
           L+ L+ R C     S+   LPF I  +++   L          LP+   LGSL +LDL+D
Sbjct: 715 LEVLNLRQC-----SSLVKLPFSIGNLQKLQTLTLRGCSKLEDLPANIKLGSLGELDLTD 769

Query: 152 C-------------------GLGEGAIPSDIGNLHSLK---------------------T 171
           C                   G     +PS I +   L                       
Sbjct: 770 CLLLKRFPEISTNVEFLRLDGTAIEEVPSSIKSWSRLNEVDMSYSENLKNFPHAFDIITE 829

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL 231
           L+++       P  +     L  L L+ CK+L SLPQ+P ++  +    C SL  L  + 
Sbjct: 830 LHMTNTEIQEFPPWVKKFSRLTVLILKGCKKLVSLPQIPDSITYIYAEDCESLERLDCSF 889

Query: 232 KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
               +    + F    KL   N  A  +      ++  P+  ++ V+PG E+P +F +Q+
Sbjct: 890 ---HNPNICLKFAKCFKL---NQEARDL------IIQTPTSNYA-VLPGREVPAYFTHQS 936

Query: 292 -EGSSITV 298
             G S+T+
Sbjct: 937 TTGGSLTI 944


>gi|395225508|ref|ZP_10404030.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
 gi|394446355|gb|EJF07187.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
          Length = 411

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 125/277 (45%), Gaps = 53/277 (19%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L LD+ ++KE PL                     LP  I +LK+L +L     F
Sbjct: 27  LQNLTSLFLDRNNLKEFPLK-------------------ELPPEIGNLKNLTSL----YF 63

Query: 61  KFENLLE---TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
           +  +L E    +G +++L  L +S   +   P  I  ++NL +LS    N         L
Sbjct: 64  RNNDLKELSPEIGNLQNLTSLYLSHNNLEELPPEIGNLQNLTSLSLSFIN------LKEL 117

Query: 118 PFPINLMRRSSDLG------ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
           P  I  ++  ++LG        + P +  L +LT L LS+  L E  +P +IGNL +L +
Sbjct: 118 PPEIGNLQNLTELGLSGNNLKELPPEIGNLQNLTSLFLSNNNLKE--LPPEIGNLQNLTS 175

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL 231
           LYL  NN   LP  I  L NLE L+L++     +L +LPP +  ++     + + L    
Sbjct: 176 LYLDNNNLKELPPEIGNLQNLEVLRLDN----NNLKELPPEIGNLQ---NLTELWLTDKK 228

Query: 232 KLRKSSCTIIDFV-----DSLKLLGKNGLAISMLREF 263
             R    T+ DF      D + +  K  L++ MLR F
Sbjct: 229 SERDKDETVFDFFIRAGGDKINIQKKVSLSV-MLRFF 264


>gi|357469491|ref|XP_003605030.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506085|gb|AES87227.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1391

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 10/212 (4%)

Query: 23  LLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG 82
            L  LV L+  GC  L      +  L SL+ L+   C KF++  + + +++   ++ +  
Sbjct: 696 FLPNLVYLSASGCSELKSFVPKM-YLPSLQELSFNFCKKFKHFPQVMQKMDKPLKIHMIS 754

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLP------ 136
           TAI+  P SI  +K L+ +    C G    +S +L  P  +  +      L +       
Sbjct: 755 TAIKEFPKSIGNLKGLEYMDMSICKGLTELSSSFLLLPKLVTLKIDGCSQLGISFRRFKE 814

Query: 137 ---SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
                +G  ++  L  S+  L    + + I N   L+ L +S N FV LP  I    +L+
Sbjct: 815 RHSVANGYPNVETLHFSEANLSYEDVNAIIENFPKLEDLKVSHNGFVALPNYIRRSLHLK 874

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRVNGCASLV 225
            L +  C+ L  +P+LP +V+K+    C SL 
Sbjct: 875 NLDVSFCRNLTEIPELPSSVQKIDARHCQSLT 906


>gi|168047550|ref|XP_001776233.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672466|gb|EDQ59003.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 610

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 28/219 (12%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  L  L  L L GC  L  LP+ + +L SL +LNL  C    +L + +G++ 
Sbjct: 415 LTSLPNELGNLISLTFLNLSGCSRLTLLPNELGNLTSLISLNLSECSSLTSLPKELGKLS 474

Query: 74  SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL ELDI G  ++   P  +  +  L +L+  GC     S+   LP              
Sbjct: 475 SLIELDIGGCESLTSLPKELGNITTLISLNLEGC-----SSLTSLP-------------- 515

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                L  L SLTKLD+  C     ++P ++GNL SL T  L   ++ ++LP  +  L +
Sbjct: 516 ---KELGNLTSLTKLDIRKCS-SLISLPKELGNLTSLSTCNLEGCSSLISLPKELGNLTS 571

Query: 192 LEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           L  L LE C  L SLP    N   +  +R+N C++L +L
Sbjct: 572 LNTLNLEGCSSLTSLPNELFNFTSLTILRINDCSNLTSL 610



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 14/224 (6%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  L+ L  L L GC NL  LP+ + +  SL  LNL  C+K  +L   +G + 
Sbjct: 343 LTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNFTSLAMLNLRRCWKLISLPNELGNLT 402

Query: 74  SLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCYLPFPINLMRRSS 128
           SL  L++S  + +   P+ +  + +L  L+  GC+     P    +      +NL   SS
Sbjct: 403 SLISLNLSECSRLTSLPNELGNLISLTFLNLSGCSRLTLLPNELGNLTSLISLNLSECSS 462

Query: 129 DLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
                 LP  L  L SL +LD+  C     ++P ++GN+ +L +L L   ++  +LP  +
Sbjct: 463 ---LTSLPKELGKLSSLIELDIGGCE-SLTSLPKELGNITTLISLNLEGCSSLTSLPKEL 518

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKV---RVNGCASLVTL 227
             L +L KL +  C  L SLP+   N+  +    + GC+SL++L
Sbjct: 519 GNLTSLTKLDIRKCSSLISLPKELGNLTSLSTCNLEGCSSLISL 562



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 22/230 (9%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +++  +P  +   + L  L L+ C  L+ LP+ + +L SL +LNL  C +  +L   +G 
Sbjct: 365 SNLTSLPNELGNFTSLAMLNLRRCWKLISLPNELGNLTSLISLNLSECSRLTSLPNELGN 424

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS-- 128
           + SL  L++SG + +   P+ +  + +L +L+   C+   S        P  L + SS  
Sbjct: 425 LISLTFLNLSGCSRLTLLPNELGNLTSLISLNLSECSSLTS-------LPKELGKLSSLI 477

Query: 129 --DLGA----LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
             D+G       LP  L  + +L  L+L  C     ++P ++GNL SL  L + K ++ +
Sbjct: 478 ELDIGGCESLTSLPKELGNITTLISLNLEGCS-SLTSLPKELGNLTSLTKLDIRKCSSLI 536

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
           +LP  +  L +L    LE C  L SLP+   N   +  + + GC+SL +L
Sbjct: 537 SLPKELGNLTSLSTCNLEGCSSLISLPKELGNLTSLNTLNLEGCSSLTSL 586



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 57/201 (28%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  LS L++L + GC++L  LP  + ++ +L +LNL GC    +L + +G 
Sbjct: 461 SSLTSLPKELGKLSSLIELDIGGCESLTSLPKELGNITTLISLNLEGCSSLTSLPKELGN 520

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           + SL +LDI                                            R+ S L 
Sbjct: 521 LTSLTKLDI--------------------------------------------RKCSSL- 535

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEG-----AIPSDIGNLHSLKTLYLSK-NNFVTLPAS 185
            + LP    LG+LT   LS C L EG     ++P ++GNL SL TL L   ++  +LP  
Sbjct: 536 -ISLP--KELGNLT--SLSTCNL-EGCSSLISLPKELGNLTSLNTLNLEGCSSLTSLPNE 589

Query: 186 INCLFNLEKLKLEDCKRLQSL 206
           +    +L  L++ DC  L SL
Sbjct: 590 LFNFTSLTILRINDCSNLTSL 610



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 39/217 (17%)

Query: 25  SGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA 84
           + L  L L  C NL  LP+ + +L SL  +NL  C    +L   +G + SL  L++SG +
Sbjct: 66  TSLTSLNLSRCSNLTSLPNELGNLISLIFVNLSECLNLTSLPNKLGNLTSLTSLNLSGCS 125

Query: 85  -IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA------LMLPS 137
            +   P+ +  + +L  L+   C     S    LP  +  +   + L        + LP+
Sbjct: 126 NLTSLPNGLGNLTSLIFLNLSRC-----SRLTLLPNALGNLTSLTLLNLSECFRLISLPN 180

Query: 138 -LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-------------------- 176
            L  L SLT LD+ +C     ++P+++GNL SL  L LS                     
Sbjct: 181 QLGNLTSLTTLDVENCQ-SLASLPNELGNLTSLTFLNLSGCSRLTLLPNELGNLTSLTLL 239

Query: 177 -----NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
                +N  +LP  +  L +L  + L +C  L SLP 
Sbjct: 240 NLSGCSNLTSLPNELGNLTSLTSINLSECLNLISLPN 276


>gi|421092564|ref|ZP_15553301.1| leucine rich repeat protein [Leptospira borgpetersenii str.
            200801926]
 gi|410364664|gb|EKP15680.1| leucine rich repeat protein [Leptospira borgpetersenii str.
            200801926]
          Length = 1608

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 115/242 (47%), Gaps = 50/242 (20%)

Query: 40   RLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
            RLP  + + +SL +L+L+GC   E L E++G ++ L ELD+S   +   P+S+  +  L 
Sbjct: 1228 RLPDAVTTFQSLTSLSLIGCELLE-LPESMGNLKRLTELDLSQNKLTSLPASLGSLDQLT 1286

Query: 100  TLSFRGCNGPPSSASCYLPFPI----NLMRRSSDLGALM-LPSLSGLGSLTKLDLSDCGL 154
             L         S+    +P P+    NL R S     +  LP   G+G+LT   L+D   
Sbjct: 1287 RLYI------DSNQFSTIPEPVLSLKNLKRLSVCWNRISSLPD--GIGNLT--SLTDLAF 1336

Query: 155  GEG---AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ--- 208
             E    ++P+ I NL SLK L LSKN F   P  I  L NLE L L +   ++SLP+   
Sbjct: 1337 YENQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPILHLSNLETLDLGENP-IRSLPEKID 1395

Query: 209  -----------------LPPNVEKVRVNGCASLVTLLGALKLRKSSCTII-DFVDSLKLL 250
                             LP ++EK         +T L  L+L+ S    + DF+D+++ L
Sbjct: 1396 SLFYLKSLDIENTLVESLPESIEK---------LTQLETLRLKGSKLKEVPDFLDNMESL 1446

Query: 251  GK 252
             K
Sbjct: 1447 RK 1448


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 36/212 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L    +  +P  I  L  L +L L   + L  LP  I  L++L+ LNL    
Sbjct: 135 LQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQ-LTTLPKEIGQLQNLQKLNL-NSN 192

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L+ LD+    +   P  I+ ++NL+TL                   
Sbjct: 193 QLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTL------------------- 233

Query: 121 INLMRRSSDLGALMLPSLS----GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
                   DLG   L +L      L +L  LDL    L    +P +IGNL +L+TL L  
Sbjct: 234 --------DLGRNQLTTLPEEIWNLQNLQTLDLGRNQLT--TLPEEIGNLQNLQTLDLEG 283

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           N   TLP  I  L NL+KL LE   +L +LP+
Sbjct: 284 NQLATLPEEIGNLQNLQKLDLE-GNQLTTLPK 314



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 30/199 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L +  +  +P  I  L  L  L L G   L  LP  I +L++L+TL+L G  
Sbjct: 204 LQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDL-GRNQLTTLPEEIWNLQNLQTLDL-GRN 261

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E +G +++L+ LD+ G  +   P  I  ++NL+ L   G      +    LP  
Sbjct: 262 QLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEG------NQLTTLPKE 315

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  +++   L             LT L            P +IGNL  L+TL L  N   
Sbjct: 316 IGKLQKLKKLYLYN-------NRLTTL------------PIEIGNLQKLQTLSLGHNQLT 356

Query: 181 TLPASINCLFNLEKLKLED 199
           TLP  I    NL+KLK+ D
Sbjct: 357 TLPKEIG---NLQKLKMLD 372



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 16/173 (9%)

Query: 69  VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR--R 126
           +G++++L +LD+S   +   P  I  ++NL+ L          +    LP  I  ++  +
Sbjct: 132 IGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLS------HNQLTTLPKEIGQLQNLQ 185

Query: 127 SSDLGALMLPSLSG-LGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
             +L +  L +LS  +G+L  L   D G  +   +P +I NL +L+TL L +N   TLP 
Sbjct: 186 KLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPE 245

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
            I  L NL+ L L    +L +LP+   N++ ++      N  A+L   +G L+
Sbjct: 246 EIWNLQNLQTLDL-GRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQ 297



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 17/224 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L    +  +P  I  L  L +L L   + L  L   I +L++L+TL+L G  
Sbjct: 158 LQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQ-LTTLSKEIGNLQNLQTLDL-GRN 215

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E +  +++L+ LD+    +   P  I+ ++NL+TL   G N         LP  
Sbjct: 216 QLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDL-GRN-----QLTTLPEE 269

Query: 121 INLMR--RSSDLGALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++  ++ DL    L +L      L +L KLDL    L    +P +IG L  LK LYL
Sbjct: 270 IGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLT--TLPKEIGKLQKLKKLYL 327

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
             N   TLP  I  L  L+ L L    +L +LP+   N++K+++
Sbjct: 328 YNNRLTTLPIEIGNLQKLQTLSL-GHNQLTTLPKEIGNLQKLKM 370



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP----QLPPNV 213
            +P +IG L +L+ L LS N  +TLP  I  L NL+KL L    +L +LP    QL  N+
Sbjct: 127 TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSH-NQLTTLPKEIGQL-QNL 184

Query: 214 EKVRVN 219
           +K+ +N
Sbjct: 185 QKLNLN 190


>gi|15241609|ref|NP_199300.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2660663|gb|AAC79134.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|10177477|dbj|BAB10868.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007787|gb|AED95170.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1170

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 149/343 (43%), Gaps = 61/343 (17%)

Query: 26   GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC--------FKFENL----------LE 67
             L +L L+GC +L++LP  + ++KSL  LN+  C         K  +L          LE
Sbjct: 725  NLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKILILSDCSKLE 784

Query: 68   TVGQV-ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
                + E+LEEL + GTAI+  P +   +  L  L+  GC    S        P  L ++
Sbjct: 785  EFEVISENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELES-------LPKRLGKQ 837

Query: 127  SSDLGALMLPSLSGLGSLTKLDLSDCG-----LGEGAIPSDIGNLHSLKTLYLSKN-NFV 180
             + L  L+L   S L S+   D+ D       L +G     I  + SLK L LS+N   V
Sbjct: 838  KA-LQELVLSGCSKLESVPT-DVKDMKHLRLLLLDGTRIRKIPKIKSLKCLCLSRNIAMV 895

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL--------- 231
             L  ++    NL+ L +++C+ L+ LP LP  +E + V GC  L ++   L         
Sbjct: 896  NLQDNLKDFSNLKCLVMKNCENLRYLPSLPKCLEYLNVYGCERLESVENPLVADRLTLFL 955

Query: 232  ----KLRK----SSCTII--DFVDSLKLLGK---NGLAISMLREFLEVVSAPSHKFSIVV 278
                +LR     ++C  +  D  DS+    K   + LA+    +  ++VS     F+   
Sbjct: 956  DRSEELRSTFLFTNCHNLFQDAKDSISTYAKWKCHRLAVECYEQ--DIVSGAF--FNTCY 1011

Query: 279  PGSEIPKWFMYQNEGSSIT-VTRPSYLCNMNQVVGYAACRVFH 320
            PG  +P WF +Q  GS +     P +   M   +   A   FH
Sbjct: 1012 PGYIVPSWFDHQAVGSVLEPRLEPHWYNTMLSGIALCAVVSFH 1054



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL LD T IK +P +   L+ LV L ++GC  L  LP  +   K+L+ L L GC K
Sbjct: 791 ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQELVLSGCSK 850

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
            E++   V  ++ L  L + GT IR  P     +K+LK L
Sbjct: 851 LESVPTDVKDMKHLRLLLLDGTRIRKIPK----IKSLKCL 886


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 20/223 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L       +P  +E L  L +L+L G   L  LP+ I  LK+L+ L L    
Sbjct: 89  LKNLRKLNLHDNQFTILPKEVEKLENLKELSL-GSNRLTTLPNEIGQLKNLRVLKLTHN- 146

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F+ + + +GQ+++L+ L++    +   P+ I  ++NLK+L         S+    LP  
Sbjct: 147 QFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDL------GSNRLTTLPNE 200

Query: 121 INLMRRSSDL--GALMLPSL-SGLGSLTKLDLSDCGLGEGAI---PSDIGNLHSLKTLYL 174
           I  +++  DL      L +L + +G L   +L D  LG   +   P++IG L +L+TLYL
Sbjct: 201 IGQLQKLQDLYLSTNRLTTLPNEIGQLQ--NLQDLYLGSNQLTILPNEIGQLKNLQTLYL 258

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             N   TL   I  L NL+ L L + +    L   P  +E+++
Sbjct: 259 RSNRLTTLSKDIEQLQNLKSLDLWNNQ----LTTFPKEIEQLK 297



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 12/198 (6%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +R L L     K +P  I  L  L +L L   + L  LP  I  LK+L+ LNL    +F 
Sbjct: 46  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIGQLKNLRKLNLHDN-QFT 103

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L + V ++E+L+EL +    +   P+ I  +KNL+ L          +    +P  I  
Sbjct: 104 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKL------THNQFKTIPKEIGQ 157

Query: 124 MR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNF 179
           ++  ++ +LG   L +L + +G L  L   D G      +P++IG L  L+ LYLS N  
Sbjct: 158 LKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRL 217

Query: 180 VTLPASINCLFNLEKLKL 197
            TLP  I  L NL+ L L
Sbjct: 218 TTLPNEIGQLQNLQDLYL 235



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 19/215 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L     K +P  I  L  L  L L G   L  LP+ I  L++LK+L+L G  
Sbjct: 135 LKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNL-GNNQLTALPNEIGQLQNLKSLDL-GSN 192

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L   +GQ++ L++L +S   +   P+ I  ++NL+ L + G N         LP  
Sbjct: 193 RLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDL-YLGSN-----QLTILPNE 246

Query: 121 INLMR-------RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           I  ++       RS+ L  L    +  L +L  LDL +  L     P +I  L +L+ L 
Sbjct: 247 IGQLKNLQTLYLRSNRLTTLS-KDIEQLQNLKSLDLWNNQLT--TFPKEIEQLKNLQVLD 303

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           L  N   TLP  I  L NL+ L L    +L +LP+
Sbjct: 304 LGSNQLTTLPEEIEQLKNLQVLDL-GSNQLTTLPE 337



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            +P +IG L +L+ L L+KN    LP  I  L NL KL L D +       LP  VEK+
Sbjct: 58  TLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQ----FTILPKEVEKL 112


>gi|295083321|gb|ADF78114.1| rj2 protein [Glycine max]
          Length = 1052

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 118/295 (40%), Gaps = 56/295 (18%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  L  L    CK L   P     L SL+ LNL  C+  E+  + +G++E++ +L 
Sbjct: 676 SIGFLDKLKILNAFRCKRLRSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRQLC 733

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--INLMRRSSDLGALMLPS 137
           +S ++I   P   F  +NL  L  RG      S       P  I LM   + + AL L  
Sbjct: 734 LSESSITELP---FSFQNLAGL--RGLELLFLSPHTIFKVPSSIVLMPELTVIRALGLKG 788

Query: 138 LSGL---------GSLTK-----LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
              L         GS+       L +S C L +     D      +K L LS+NNF  LP
Sbjct: 789 WQWLKQEEGEEKTGSIVSSMVEMLTVSSCNLCDEFFSIDFTWFAHMKELCLSENNFTILP 848

Query: 184 ASIN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIID 242
             I  C F L KL +  CK L+ +  +PPN++      C SL +                
Sbjct: 849 ECIKECQF-LRKLDVCGCKHLREIRGIPPNLKHFFAINCKSLTS---------------- 891

Query: 243 FVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSIT 297
                          S +R+FL      +      +PG  IP+WF  Q+ G SI+
Sbjct: 892 ---------------SSIRKFLNQELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS 931


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 150/349 (42%), Gaps = 57/349 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L EL L+   + E+P  I  L+ LV+L L G   L  LP+ I  L SL  LNL    
Sbjct: 131 LTSLVELNLEHNKLTELPAEIGQLASLVELNL-GNNRLTSLPAEIGQLTSLVELNLDDNT 189

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
               L   +GQ+ SL EL++    +   P+ I  + +LK L          +    LP  
Sbjct: 190 PLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLH------RNQLTSLPAE 243

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L SL +L+L    L   ++P++IG L SLK L+L +N   
Sbjct: 244 I-----------------GQLASLVELNLHRNQLT--SVPAEIGQLTSLKRLFLHRNQLT 284

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALKLRK 235
           +LPA I  L +L KL L    +L SLP     +E +R      N   S+   +G L    
Sbjct: 285 SLPAEIGQLTSLVKLDL-TTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQL---- 339

Query: 236 SSCTIIDFVDSLKLLGKNGLA-----ISMLREFLEVVSAPSHKFSI---VVPGSEIPKWF 287
           +S T++D       LG N L      I  L   +E+    +H  S+   +   + + + F
Sbjct: 340 TSLTLLD-------LGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLF 392

Query: 288 MYQNEGSSITVTRPSYLCNMN--QVVGYAACRVFHVPKHSTGIRRFYRY 334
           +++N+ +S+    P+ +  +   +++     ++  VP  +  +    R 
Sbjct: 393 LHRNQLTSM----PAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRL 437



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 13/211 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L+ L L +  +  +P  I  L+ LV+L L   K L  LP+ I  L+SL+ L L G  
Sbjct: 270 LTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNK-LTSLPAEIGQLESLRELRLSGN- 327

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG--CNGPPSSASCYLP 118
           +  ++   +GQ+ SL  LD+    +   P+ I  + +L  L+  G      P+       
Sbjct: 328 QLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLAS 387

Query: 119 FPINLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSK 176
                + R+       L S+ + +G LT L++   G  +  ++P++ G L SLK L L +
Sbjct: 388 LKRLFLHRNQ------LTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDR 441

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           N   ++PA I  L +LE L L    +L S+P
Sbjct: 442 NQLTSVPAEIGQLTSLEMLHL-GGNQLTSVP 471



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 12/193 (6%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E LREL L    ++ +P  I  L+ L  L L G   L  +P+ I  L SL  LNL G  
Sbjct: 316 LESLRELRLSGNQLRSVPAEIGQLTSLTLLDL-GNNQLTSMPAEIGQLTSLVELNL-GGN 373

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN--GPPSSASCYLP 118
              ++   +GQ+ SL+ L +    +   P+ I  + +L+ L   G      P+ A     
Sbjct: 374 HLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTS 433

Query: 119 FPINLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSK 176
               L+ R+       L S+ + +G LT L++   G  +  ++P++IG L SL TL+L  
Sbjct: 434 LKRLLLDRNQ------LTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGG 487

Query: 177 NNFVTLPASINCL 189
           N   +LPA+I  L
Sbjct: 488 NQLTSLPAAIRDL 500



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 85/197 (43%), Gaps = 30/197 (15%)

Query: 35  CKNLVRLPSNINSLKSLK----------------------TLNLLGCFKFENLLETVGQV 72
           C  L  LP+ I  L SLK                      TL +L   +  +L   +GQ+
Sbjct: 5   CNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQL 64

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG-CNGPPSSASCYLPFPINL-MRRSSDL 130
            SL ELD+S   +   P+ I  + +L  L        PPS       + +NL   R + L
Sbjct: 65  ASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRLTSL 124

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
            A     +  L SL +L+L    L E  +P++IG L SL  L L  N   +LPA I  L 
Sbjct: 125 PA----EIGQLTSLVELNLEHNKLTE--LPAEIGQLASLVELNLGNNRLTSLPAEIGQLT 178

Query: 191 NLEKLKLEDCKRLQSLP 207
           +L +L L+D   L  LP
Sbjct: 179 SLVELNLDDNTPLTELP 195


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 28/208 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    ++ +P  I  L  L +L L   K L  LP +I +LK+L+TL+L    
Sbjct: 67  LKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNK-LEALPEDIGNLKNLRTLHLYNN- 124

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L E +G++++L+EL +S   +   P  I  +KNL+ L          S +     P
Sbjct: 125 QLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDL--------SRNQLKTLP 176

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   ++G L         +L +L LSD  L   A+P DIGNL +L+ L LS+N   
Sbjct: 177 -------EEIGKLQ--------NLQELYLSDNKLE--ALPEDIGNLKNLQILDLSRNKLE 219

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            LP  I  L NL KL L    +L++LP+
Sbjct: 220 ALPKEIGKLRNLPKLDL-SHNQLETLPE 246



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 27/178 (15%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I  LK+L+ L+L    + + L E +GQ+++L EL +S   +   P  I  +KNL+T
Sbjct: 60  LPKEIGKLKNLQELDL-SHNQLQALPEDIGQLQNLRELYLSDNKLEALPEDIGNLKNLRT 118

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           L         ++    LP  I                   L +L +L LSD  L   A+P
Sbjct: 119 LHLY------NNQLKTLPEEI-----------------GKLQNLQELYLSDNKLE--ALP 153

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
            DIGNL +L+ L LS+N   TLP  I  L NL++L L D K L++LP+   N++ +++
Sbjct: 154 EDIGNLKNLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNK-LEALPEDIGNLKNLQI 210



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 17/214 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L +  +K +P  I  L  L +L L   K L  LP +I +LK+L+ L+L    
Sbjct: 159 LKNLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNK-LEALPEDIGNLKNLQILDL-SRN 216

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K E L + +G++ +L +LD+S   +   P  I  ++NL+ L  R       +    LP  
Sbjct: 217 KLEALPKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLR------YNQLETLPEE 270

Query: 121 INLMRRSSDL-----GALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++   +L         LP   G L +L  L+LS   L   A+P +IGNL +L+TL L
Sbjct: 271 IGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLE--ALPEEIGNLKNLRTLNL 328

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             N   TLP  I  L NL +L L   K L++LP+
Sbjct: 329 QYNPLKTLPEEIGKLQNLPELDLSHNK-LEALPK 361



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 28/197 (14%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
             ++ +P  I  L  L +L L+  K L  LP  I  LK+L+ LNL    + + L + +G+
Sbjct: 446 NQLEALPKEIGKLQNLQELNLRYNK-LEALPKEIGKLKNLQKLNL-QYNQLKTLPKEIGK 503

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +++L++L++    ++  P  I  +KNL+ L  R      ++    LP  I          
Sbjct: 504 LKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLR------NNQLKTLPKEI---------- 547

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
                    L +L +L+L    L    +P +IG L +LK LYLS N    LP  I  L N
Sbjct: 548 -------GKLQNLQELNLRYNKLE--TLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVN 598

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L KL L    +LQ+LP+
Sbjct: 599 LRKLYL-SGNQLQALPK 614



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 28/197 (14%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
             ++ +P  I  L  L +L L   K L  LP  I  LK+L+TLNL    K E L E +G 
Sbjct: 262 NQLETLPEEIGQLQNLRELHLYNNK-LKALPKEIGKLKNLRTLNL-STNKLEALPEEIGN 319

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           +++L  L++    ++  P  I  ++NL  L          S +     P        ++G
Sbjct: 320 LKNLRTLNLQYNPLKTLPEEIGKLQNLPELDL--------SHNKLEALP-------KEIG 364

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
            L         +L KLDLS   L   A+P +IG L +L+ L+L  N   TLP  I  L N
Sbjct: 365 QLQ--------NLPKLDLSHNQLQ--ALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQN 414

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+ L L   K L++LP+
Sbjct: 415 LQILDLSHNK-LEALPK 430



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 105/240 (43%), Gaps = 39/240 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LREL L    +K +P  I  L  L  L L   K L  LP  I +LK+L+TLNL    
Sbjct: 274 LQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNK-LEALPEEIGNLKNLRTLNL-QYN 331

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
             + L E +G++++L ELD+S   +   P  I  ++NL  L          S +     P
Sbjct: 332 PLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDL--------SHNQLQALP 383

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   ++G L         +L +L L +  L    +P +IG L +L+ L LS N   
Sbjct: 384 -------KEIGQLQ--------NLRELHLYNNQLE--TLPEEIGKLQNLQILDLSHNKLE 426

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK--------VRVNGCASLVTLLGALK 232
            LP  I  L NL+ L L    R   L  LP  + K        +R N   +L   +G LK
Sbjct: 427 ALPKEIGQLQNLQILDL----RYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLK 482



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 26/141 (18%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
           LD+S   ++  P  I  +KNL+ L          S +     P        D+G L    
Sbjct: 50  LDLSSNKLKTLPKEIGKLKNLQELDL--------SHNQLQALP-------EDIGQLQ--- 91

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
                +L +L LSD  L   A+P DIGNL +L+TL+L  N   TLP  I  L NL++L L
Sbjct: 92  -----NLRELYLSDNKLE--ALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYL 144

Query: 198 EDCKRLQSLPQLPPNVEKVRV 218
            D K L++LP+   N++ +++
Sbjct: 145 SDNK-LEALPEDIGNLKNLQI 164



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 14/194 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L    +K +P  I  L  L +L L+    L  LP +I  LK+L+ L+L    
Sbjct: 481 LKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQ-YNQLKTLPKDIGKLKNLRELDLRNN- 538

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL--SFRGCNGPPSSASCYLP 118
           + + L + +G++++L+EL++    +   P  I  ++NLK L  S       P        
Sbjct: 539 QLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKL-- 596

Query: 119 FPINLMR---RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
             +NL +     + L AL    +  L +L  LDL +  L    +P DIG L SL+TL L 
Sbjct: 597 --VNLRKLYLSGNQLQALP-KEIGKLQNLQGLDLGNNPLK--TLPKDIGKLKSLQTLCLD 651

Query: 176 KNNFVTLPASINCL 189
                +LP  I  L
Sbjct: 652 NKQLESLPIEIGKL 665


>gi|296089445|emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 102/225 (45%), Gaps = 34/225 (15%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L+D + I  MP        L  LTLKGC  L  LP N   L+ L+TL+  GC   E+  +
Sbjct: 546 LVDISSISSMP-------NLETLTLKGCTRLKSLPRNFPKLECLQTLSCCGCSNLESFPK 598

Query: 68  TVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
              ++ SL +L++S T I   PSSI  +  LK L    C    S     LP         
Sbjct: 599 IEEEMRSLRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSS-----LP--------- 644

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
                    S+  L SL  L+L  C    G    +IG+L +LK L LS   N  +LP SI
Sbjct: 645 --------DSIYSLSSLQTLNLFACSRLVGFPGINIGSLKALKYLDLSWCENLESLPNSI 696

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLP----PNVEKVRVNGCASLVTL 227
             L +L+ L L  C +L+  P +       +E +  +GC +L +L
Sbjct: 697 GSLSSLQTLLLIGCSKLKGFPDINFGSLKALESLDFSGCRNLESL 741



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 48/76 (63%)

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           +  L  L +L L DC L +G I   I +L SL+ LYL  N+F ++PA I+ L NL+ L L
Sbjct: 885 IQNLSPLQQLSLHDCNLMKGTILDHICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDL 944

Query: 198 EDCKRLQSLPQLPPNV 213
             CK+LQ +P+LP ++
Sbjct: 945 SHCKKLQQIPELPSSL 960



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 86/177 (48%), Gaps = 24/177 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  LR+L L +T I  +P SI  L+GL +L L  CK L  LP +I SL SL+TLNL  C 
Sbjct: 603 MRSLRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACS 662

Query: 61  KFENLLE-TVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLP 118
           +        +G +++L+ LD+S    +   P+SI  + +L+TL   GC            
Sbjct: 663 RLVGFPGINIGSLKALKYLDLSWCENLESLPNSIGSLSSLQTLLLIGC------------ 710

Query: 119 FPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
                    S L      +   L +L  LD S C   E ++P  I N+ SLKTL ++
Sbjct: 711 ---------SKLKGFPDINFGSLKALESLDFSGCRNLE-SLPVSIYNVSSLKTLGIT 757



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 34/203 (16%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LPSN ++  +L  LNL  C + ++L E     + L+ +D+S +      SSI  M NL+T
Sbjct: 503 LPSNFHT-DNLVELNL-WCSRIKHLWEGNMPAKKLKVIDLSYSMHLVDISSISSMPNLET 560

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE-GAI 159
           L+ +GC    S        P N             P L  L +L     S CG     + 
Sbjct: 561 LTLKGCTRLKS-------LPRNF------------PKLECLQTL-----SCCGCSNLESF 596

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLP---PNVEKV 216
           P     + SL+ L LS+   + LP+SI+ L  L++L L  CK+L SLP       +++ +
Sbjct: 597 PKIEEEMRSLRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTL 656

Query: 217 RVNGCASLVTL----LGALKLRK 235
            +  C+ LV      +G+LK  K
Sbjct: 657 NLFACSRLVGFPGINIGSLKALK 679


>gi|357469529|ref|XP_003605049.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506104|gb|AES87246.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1352

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 39/277 (14%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  +  LV L+  GC  L      +  L SL+ ++   C KFE+    + +++   ++ 
Sbjct: 661 SVGFMPNLVYLSASGCTELKSFVPKM-YLPSLQVISFNFCKKFEHFPHVIQKMDRPLKIH 719

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP---------INLMRRSSDL 130
           +  TAI+  P SI  +  L+ +    C G    +S +L  P          + +R S   
Sbjct: 720 MINTAIKEIPKSIGNLTGLELMDMSICKGLKDLSSSFLLLPKLVTLKIDGCSQLRTSFQR 779

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
                   +G  ++  L  S   L    + + I N   L+ L +  N FV+LP  I    
Sbjct: 780 FKERNSGANGYPNIETLHFSGANLSNDDVNAIIENFPKLEDLKVFHNWFVSLPNCIRGSL 839

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLL 250
           +L+ L +  CK L  +P+LP N++K+    C SL +        K+S  +   V      
Sbjct: 840 HLKSLDVSFCKNLTEIPELPLNIQKIDARYCQSLTS--------KASSILWSMV------ 885

Query: 251 GKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
                  S   + L+VV        + +P  EIP+WF
Sbjct: 886 -------SQEIQRLQVV--------MPMPKREIPEWF 907


>gi|116788284|gb|ABK24822.1| unknown [Picea sitchensis]
          Length = 495

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 23/233 (9%)

Query: 1   MECLRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           +  LR+L+L + + +K +P S   L  L  + L  C NL RLP +I  L+ L+ +NL  C
Sbjct: 251 LRSLRDLVLTECSKMKSLPDSFCHLWNLQHIDLSFCCNLERLPDSIGRLQGLRHINLSYC 310

Query: 60  FKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL--SFRGCNGPPSSASCYL 117
              E L +++G++  L+ +D+ G              NL++L  SF      P S     
Sbjct: 311 HDLERLPDSIGRLRGLQHIDLRGC------------HNLESLPDSFGELWDLPYSFG--E 356

Query: 118 PFPINLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
           P+ +  +  S       LP S   L  L  +DL  C     ++P   G+L +L  + LS 
Sbjct: 357 PWDLRHINLSGCHDLQRLPDSFVNLRYLQHIDLQGCH-NLQSLPDGFGDLRNLDHVNLSN 415

Query: 177 -NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLV 225
            ++   LP S   L NL+ + L  C  L+ LP    N  K++   V GC++L+
Sbjct: 416 CHDLEWLPDSFGNLRNLQYIDLSGCHNLERLPNYFRNFNKLKYLDVEGCSNLI 468


>gi|255564976|ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537309|gb|EEF38940.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 944

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 139/331 (41%), Gaps = 54/331 (16%)

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNF 179
           +N +  S     + LP  S   +L  ++L  C +    +PS IG L  L  L L      
Sbjct: 630 LNSINLSDSQHLIRLPDFSEALNLEYINLEGC-ISLAQVPSSIGYLTKLDILNLKDCKEL 688

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA--------------SLV 225
            ++P+ I+ L +L KL L  C  L      P N+E++ ++G A              +  
Sbjct: 689 RSIPSLID-LQSLRKLNLSGCSNLNHCQDFPRNIEELCLDGTAIEELPASIEDLSELTFW 747

Query: 226 TLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPK 285
           ++    +L ++SC +I   D+ K + +   A         + S PS  F    PG+EIP 
Sbjct: 748 SMENCKRLDQNSCCLIA-ADAHKTIQRTATAAG-------IHSLPSVSFGF--PGTEIPD 797

Query: 286 WFMYQNEGSSITVT-RPSYLCNMNQVVGYAACRVFHVPKHSTGIRRFY-------RYPHP 337
           W +Y+  GSSITV   P++  N ++ +G+A C V     H   I   Y       +  H 
Sbjct: 798 WLLYKETGSSITVKLHPNWHRNPSRFLGFAVCCVVKFT-HFIDINNIYVICECNFKTNHD 856

Query: 338 A-HVLHCSMD------EKFGHRGSDHLWL-----LYL-PRQSYYCNVKWHFESNHFRLSF 384
             HV++C +       ++     S H+++     +YL   +  Y    +H+E   F+  +
Sbjct: 857 DHHVVNCFLQGLNNGKDESDLVKSQHVYIGYDFGIYLRAVKGTYPGRLYHYEEVTFKF-Y 915

Query: 385 MDEREKHCPAGSGTGLKVKRCGFHPGYMHEV 415
             +   H  A      KV +CG H  Y  + 
Sbjct: 916 AKKMVGHTVAWR----KVDKCGVHLLYAQDA 942



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 27/164 (16%)

Query: 2   ECLREL----LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLL 57
           +CL++L    L D   +  +P   E L+ L  + L+GC +L ++PS+I  L  L  LNL 
Sbjct: 625 QCLKKLNSINLSDSQHLIRLPDFSEALN-LEYINLEGCISLAQVPSSIGYLTKLDILNLK 683

Query: 58  GCFKFENL-----LETVGQV---------------ESLEELDISGTAIRCPPSSIFLMKN 97
            C +  ++     L+++ ++                ++EEL + GTAI   P+SI  +  
Sbjct: 684 DCKELRSIPSLIDLQSLRKLNLSGCSNLNHCQDFPRNIEELCLDGTAIEELPASIEDLSE 743

Query: 98  LKTLSFRGCNGPPSSASCYLPFPIN--LMRRSSDLGALMLPSLS 139
           L   S   C     ++ C +    +  + R ++  G   LPS+S
Sbjct: 744 LTFWSMENCKRLDQNSCCLIAADAHKTIQRTATAAGIHSLPSVS 787


>gi|105922557|gb|ABF81423.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1359

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 52/79 (65%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            M CL  L LD T I ++  S+  L GL  L++  CKNL  +PS+I  LKSLK L+L GC 
Sbjct: 1041 MNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS 1100

Query: 61   KFENLLETVGQVESLEELD 79
            + + + E +G+VESLEELD
Sbjct: 1101 ELKYIPEKLGKVESLEELD 1119



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 29/198 (14%)

Query: 97   NLKTLSFRGCNG----PPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
            NLK L   GC       PS A       +NL+   S     +LP+   +GSL    L  C
Sbjct: 972  NLKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKS---IRILPNNLEMGSLKVCILDGC 1028

Query: 153  GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPN 212
               E   P  +GN++ L  L L       L +S++ L  L  L + +CK L+S+P     
Sbjct: 1029 SKLE-KFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIP----- 1082

Query: 213  VEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSH 272
                     +S+  L    KL  S C+ + ++   + LGK    +  L E L+  S P  
Sbjct: 1083 ---------SSIGCLKSLKKLDLSGCSELKYIP--EKLGK----VESLEE-LDCRSNPRP 1126

Query: 273  KFSIVVPGSEIPKWFMYQ 290
             F I VPG+EIP WF +Q
Sbjct: 1127 GFGIAVPGNEIPGWFNHQ 1144


>gi|297804200|ref|XP_002869984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315820|gb|EFH46243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1046

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 127/304 (41%), Gaps = 50/304 (16%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SIE ++ L+ L L+ C +L  LP  IN LKSLKTL L GC    NL E     +++E L 
Sbjct: 668 SIEKMNKLIYLNLRDCTSLESLPEGIN-LKSLKTLILSGC---SNLQEFQIISDNIESLY 723

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           + G+AI      I  ++NL  L+ + C         YLP                   L 
Sbjct: 724 LEGSAIEQVVEHIESLRNLILLNLKNCRRLK-----YLP-----------------NDLY 761

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            L SL +L LS C   E ++P     +  L+ L +   +    P +I CL NL+      
Sbjct: 762 KLKSLQELILSGCSALE-SLPPIKEEMECLEILLMDGTSIKQTPETI-CLSNLKMFSF-- 817

Query: 200 CKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL----RKSSCTIIDFVDSLKLLGKNGL 255
           C    S  +    +  V  +GC SL  +   + L     +   T I F +  KL      
Sbjct: 818 CG---SSIEDSTGLHYVDAHGCVSLEKVAEPVTLPLVTDRMHTTFI-FTNCFKLNRAEQE 873

Query: 256 AI---SMLREFLEVVSAPSHK---------FSIVVPGSEIPKWFMYQNEGSSITVTRPSY 303
           AI   + L+  L   ++  H           ++  PGSEIP WF +Q  GS I      +
Sbjct: 874 AIVAQAQLKSQLLARTSLQHNNKGLVLEPLVAVCFPGSEIPSWFSHQRMGSLIETDLLPH 933

Query: 304 LCNM 307
            CN+
Sbjct: 934 WCNI 937



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +  L L+ + I+++   IE L  L+ L LK C+ L  LP+++  LKSL+ L L GC   E
Sbjct: 719 IESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQELILSGCSALE 778

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYL 117
           +L     ++E LE L + GT+I+  P +I L  NLK  SF G +   S+   Y+
Sbjct: 779 SLPPIKEEMECLEILLMDGTSIKQTPETICL-SNLKMFSFCGSSIEDSTGLHYV 831



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 12/192 (6%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LPS  N  + L  L+L   +  + L E   + E+L  +D+S +      S +   KNL+ 
Sbjct: 596 LPSEFNP-EELVDLSLRYSY-IKQLWEDDKKTENLRWVDLSQSKDLRSLSGLSKAKNLER 653

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL-MLPSLSGLGSLTKLDLSDCG-LGEGA 158
           L   GC       S        +     D  +L  LP    L SL  L LS C  L E  
Sbjct: 654 LDLEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESLPEGINLKSLKTLILSGCSNLQEFQ 713

Query: 159 IPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ---LPPNVEK 215
           I SD     ++++LYL  +    +   I  L NL  L L++C+RL+ LP       ++++
Sbjct: 714 IISD-----NIESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQE 768

Query: 216 VRVNGCASLVTL 227
           + ++GC++L +L
Sbjct: 769 LILSGCSALESL 780


>gi|417785891|ref|ZP_12433591.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950926|gb|EKO05445.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 267

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 13/200 (6%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L++L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQNLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD+ G      P  I  ++ L+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAG------NQFTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 SL   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L NL+ L L D  +L SLP+
Sbjct: 177 LQNLQSLHL-DGNQLTSLPK 195



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G +    LP  I  L+ L+ LNL G  
Sbjct: 39  LQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQ-FTSLPKEIGQLQKLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 97  QFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L NL+ L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 9/104 (8%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L +L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           +L L D  +  SLP+    ++K+RV     N   SL   +G L+
Sbjct: 67  RLDL-DGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 109


>gi|215261582|gb|ACJ64862.1| disease resistance protein RPP1-like protein R8 [Arabidopsis
           thaliana]
          Length = 1207

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 39/237 (16%)

Query: 4   LREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L EL L D + + E+P SIE L+ L +L L+ C +LV LPS  N+ K L+ L L  C   
Sbjct: 741 LEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATK-LEELYLENCSSL 799

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
           E L  ++    +L++L +   +      +I    NL+ L    C       S  L  P  
Sbjct: 800 EKLPPSIN-ANNLQQLSLINCSRVVELPAIENATNLQVLDLHNC-------SSLLELP-- 849

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
                        PS++   +L KLD+S C      +PS IG++ +L  L LS  ++ V 
Sbjct: 850 -------------PSIASATNLKKLDISGCS-SLVKLPSSIGDMTNLDVLDLSNCSSLVE 895

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNV-----------EKVRVNGCASLVTL 227
           LP +IN L +   + L  C +L+S P++   +             +R+N C +LV+L
Sbjct: 896 LPININ-LKSFLAVNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSL 951



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 11/99 (11%)

Query: 135 LPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLE 193
           LP+LS   +L +L L DC      +PS I  L SL+ LYL + ++ V LP+  N    LE
Sbjct: 732 LPNLSTATNLEELKLRDCS-SLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNAT-KLE 789

Query: 194 KLKLEDCKRLQSLPQLPP-----NVEKVRVNGCASLVTL 227
           +L LE+C    SL +LPP     N++++ +  C+ +V L
Sbjct: 790 ELYLENC---SSLEKLPPSINANNLQQLSLINCSRVVEL 825



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L++ + + E+P +IE  + L  L L  C +L+ LP +I S  +LK L++ GC     L  
Sbjct: 816 LINCSRVVELP-AIENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSSLVKLPS 874

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
           ++G + +L+ LD+S  +++   P +I L K+   ++  GC+   S          +  +R
Sbjct: 875 SIGDMTNLDVLDLSNCSSLVELPININL-KSFLAVNLAGCSQLKSFPEISTKIFTDCYQR 933

Query: 127 SSDLGALMLPSLSGLGSLTKL 147
            S L  L + + + L SL +L
Sbjct: 934 MSRLRDLRINNCNNLVSLPQL 954


>gi|417761388|ref|ZP_12409399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774084|ref|ZP_12421957.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672890|ref|ZP_13234221.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942739|gb|EKN88345.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576120|gb|EKQ39129.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580084|gb|EKQ47914.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 267

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 13/200 (6%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L+ L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQKLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD++G      P  I  ++NL+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAG------NQLTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                  L   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 117 AGNQFTFLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L NL+ L L D  +L SLP+
Sbjct: 177 LQNLQSLHL-DGNQLTSLPK 195



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G +    LP  I  L++L+ LNL G  
Sbjct: 39  LQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ-FTTLPKEIGQLQNLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 97  QLTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L NL+ L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L  L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           +L L    +  +LP+    ++ +RV     N   SL   +G L+
Sbjct: 67  RLDLA-GNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQ 109


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 27/201 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L    +K +P  IE L  L  L L G   L  LP+ I  LK+L+TL+L    
Sbjct: 208 LQNLQELNLWNNQLKTLPKEIEQLKNLQTLHL-GSNQLTTLPNEIEQLKNLQTLDLY-YN 265

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+EL +    +   P  I  ++NLK+L  R      ++    LP  
Sbjct: 266 QLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLR------NNQLTTLPIE 319

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I                   L +L  LDL +  L    +P +IG L +LK+L L  N   
Sbjct: 320 I-----------------GQLQNLKSLDLRNNQLT--TLPIEIGQLQNLKSLDLRNNQLT 360

Query: 181 TLPASINCLFNLEKLKLEDCK 201
            LP  I  L NL++L L + +
Sbjct: 361 ILPKEIGQLKNLQELYLNNNQ 381



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 25/245 (10%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L+   +  +P  IE L  L  L L G   +  +P+ I  L++L+ L  L   
Sbjct: 139 LQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGL-GNNQIKIIPNGIWQLQNLQKL-YLDYN 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + + + +GQ+++L+EL++    ++  P  I  +KNL+TL         S+    LP  
Sbjct: 197 QIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHL------GSNQLTTLPNE 250

Query: 121 INLMR--RSSDLGALMLPSL-SGLGSLTKL-DLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
           I  ++  ++ DL    L +L   +G L  L +LS       A+P +IG L +LK+L L  
Sbjct: 251 IEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRN 310

Query: 177 NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKS 236
           N   TLP  I  L NL+ L L +  +L +LP        + +    +    L +L LR +
Sbjct: 311 NQLTTLPIEIGQLQNLKSLDLRN-NQLTTLP--------IEIGQLQN----LKSLDLRNN 357

Query: 237 SCTII 241
             TI+
Sbjct: 358 QLTIL 362



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 49/164 (29%)

Query: 34  GCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIF 93
             + L  LP  I  L++LK+L+L    +F+ L + +GQ+++L+EL++    +   P  I 
Sbjct: 56  SSQKLTTLPKEIKQLQNLKSLDL-ANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIE 114

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCG 153
            +KNL+TL                                      G   LT L      
Sbjct: 115 QLKNLQTLGL------------------------------------GYNQLTTLS----- 133

Query: 154 LGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
                   +IG L +LK L+L+ N   TLP  I  L NL+ L L
Sbjct: 134 -------QEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGL 170


>gi|223403523|gb|ACM89261.1| disease resistance protein (TIR-NBS-LRR class) [Arabidopsis thaliana]
          Length = 1163

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 146/340 (42%), Gaps = 57/340 (16%)

Query: 26   GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC--------FKFENL----------LE 67
             L +L L+GC +L++LP  + ++KSL  LN+  C         K  +L          LE
Sbjct: 725  NLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKILILSDCSKLE 784

Query: 68   TVGQV-ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
                + E+LEEL + GTAI+  P +   +  L  L+  GC    S        P  L ++
Sbjct: 785  EFEVISENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELES-------LPKRLGKQ 837

Query: 127  SSDLGALMLPSLSGLGSLTKL--DLSDCG--LGEGAIPSDIGNLHSLKTLYLSKN-NFVT 181
             + L  L+L   S L S+  +  D+      L +G     I  + SLK L LS+N   V 
Sbjct: 838  KA-LQELVLSGCSKLESVPTVVQDMKHLRILLLDGTRIRKIPKIKSLKCLCLSRNIAMVN 896

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT-----------LLGA 230
            L  ++   + L+ L +++C+ L+ LP LP  +E + V GC  L +           L G 
Sbjct: 897  LQDNLKDFYYLKCLVMKNCENLRYLPSLPKCLEYLNVYGCERLESVENPLVSDRLFLDGL 956

Query: 231  LKLRK----SSCTII--DFVDSLKLLGK---NGLAISMLREFLEVVSAPSHKFSIVVPGS 281
             KLR     ++C  +  D  DS+    K   + LA+    E  E        F+   PG 
Sbjct: 957  EKLRSTFLFTNCHNLFQDAKDSISTYAKWKCHRLAV----ECYEQDKVSGAFFNTCYPGY 1012

Query: 282  EIPKWFMYQNEGSSIT-VTRPSYLCNMNQVVGYAACRVFH 320
             +P WF +Q  GS +     P +   M   +   A   FH
Sbjct: 1013 IVPSWFDHQAVGSVLEPRLEPHWYNTMLSGIALCAVVSFH 1052



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL LD T IK +P +   L+ LV L ++GC  L  LP  +   K+L+ L L GC K
Sbjct: 791 ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQELVLSGCSK 850

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
            E++   V  ++ L  L + GT IR  P     +K+LK L
Sbjct: 851 LESVPTVVQDMKHLRILLLDGTRIRKIPK----IKSLKCL 886


>gi|421123429|ref|ZP_15583709.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410343480|gb|EKO94711.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 267

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 13/200 (6%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L++L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQNLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR--RSSDL 130
           ++LE LD+ G      P  I  ++ L+ L+  G      +    LP  I  ++  R  +L
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAG------NQFTSLPKEIGQLQKLRVLNL 116

Query: 131 GALMLPSL-SGLGSLTKLDLSDCGLGEGAI-PSDIGNLHSLKTLYLSKNNFVTLPASINC 188
                 SL   +G L KL+  +       I P +I    SLK L LS +   TLP  I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 189 LFNLEKLKLEDCKRLQSLPQ 208
           L NL+ L L D  +L SLP+
Sbjct: 177 LQNLQSLHL-DGNQLTSLPK 195



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G +    LP  I  L+ L+ LNL G  
Sbjct: 39  LQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQ-FTSLPKEIGQLQKLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F +L + +GQ++ L  L+++G      P  I  ++ L+ L+                  
Sbjct: 97  QFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L NL+ L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L +L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGAL-KLR 234
           +L L D  +  SLP+    ++K+RV     N   SL   +G L KLR
Sbjct: 67  RLDL-DGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLR 112


>gi|421131481|ref|ZP_15591663.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410357264|gb|EKP04531.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 1616

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 17/218 (7%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T+ +  P+S+     L  L+L+ CK L  +P +I +LK L  L+ L   K   L 
Sbjct: 1226 LNLSGTEFERFPISVTKFQNLTSLSLRDCK-LSEIPESIGNLKRLIDLH-LSSNKLTTLP 1283

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
              +G +E L EL +   +    P ++  +KNLK LS R       +    LP  I  +  
Sbjct: 1284 AGLGTLEQLVELYLDTNSFTTIPDAVLSLKNLKNLSVRW------NQISTLPNEIENLTS 1337

Query: 127  SSDLG--ALMLPSL----SGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              DL   A  L SL      L SLT++ LS     E   P  I  L +LK L + +N   
Sbjct: 1338 LEDLNLHANQLSSLPTTIQNLSSLTRIGLSKNQFSE--FPEPILYLKNLKYLNIEENRIP 1395

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
             LP +I  L NL+ L + +   ++SLPQ   N+ ++  
Sbjct: 1396 KLPETIRNLSNLKSLNISET-WIESLPQSIENLTQLET 1432



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 15/143 (10%)

Query: 137  SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLK 196
            S++   +LT L L DC L E  IP  IGNL  L  L+LS N   TLPA +  L  L +L 
Sbjct: 1239 SVTKFQNLTSLSLRDCKLSE--IPESIGNLKRLIDLHLSSNKLTTLPAGLGTLEQLVELY 1296

Query: 197  LEDCKRLQSLPQLPPNVEK-----VRVNGCASL------VTLLGALKLRKSSCTII-DFV 244
            L D     ++P    +++      VR N  ++L      +T L  L L  +  + +   +
Sbjct: 1297 L-DTNSFTTIPDAVLSLKNLKNLSVRWNQISTLPNEIENLTSLEDLNLHANQLSSLPTTI 1355

Query: 245  DSLKLLGKNGLAISMLREFLEVV 267
             +L  L + GL+ +   EF E +
Sbjct: 1356 QNLSSLTRIGLSKNQFSEFPEPI 1378


>gi|418677883|ref|ZP_13239157.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687625|ref|ZP_13248784.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|400321073|gb|EJO68933.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737949|gb|EKQ82688.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 288

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 5/195 (2%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K +P  I  L  L +L L     +  LPS I +LK+L+ L+L    + E + + +G ++
Sbjct: 62  LKTLPKEIGNLKNLKELYL-STNEITTLPSEIGNLKNLQVLSL-NVNRLETIPKEIGNLK 119

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
           +L+EL I    ++  P  I  +KNLK L              +    +  M  S++    
Sbjct: 120 NLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTK 179

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           +   +  L  L ++ L D       +P +IGNL +LK LYLS+N  ++LP+ I  L NL+
Sbjct: 180 LPQEIKNLEGLIEIYLYDNQFT--TLPKEIGNLKNLKELYLSRNQLISLPSEIGNLKNLK 237

Query: 194 KLKLEDCKRLQSLPQ 208
           +L LE+  +L  LP+
Sbjct: 238 ELYLEE-NQLTKLPK 251



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 16/204 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL L   +I  +P  I  L  L  L+L     L  +P  I +LK+LK L++ G  
Sbjct: 72  LKNLKELYLSTNEITTLPSEIGNLKNLQVLSL-NVNRLETIPKEIGNLKNLKELSI-GLN 129

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + L + +G +++L+EL +S   ++  P  I+ +K L+ +         ++    LP  
Sbjct: 130 KLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLS------TNELTKLPQE 183

Query: 121 INLMR-----RSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  +         D     LP  +  L +L +L LS   L   ++PS+IGNL +LK LYL
Sbjct: 184 IKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKELYLSRNQLI--SLPSEIGNLKNLKELYL 241

Query: 175 SKNNFVTLPASINCLFNLEKLKLE 198
            +N    LP  I  L  L +L LE
Sbjct: 242 EENQLTKLPKQIAALKKLSRLSLE 265


>gi|227438193|gb|ACP30586.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1001

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 102/212 (48%), Gaps = 29/212 (13%)

Query: 9   LDKTDIK------EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+K D+K      E+P SI  L+ L +L +  C NL  LP+ +N L+SL  LNL GC + 
Sbjct: 652 LEKLDLKGCSSLVELPSSISKLNKLTELNMPACTNLETLPTGMN-LESLNRLNLKGCTRL 710

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
             +   + +  ++ EL +  T+I   PS+++L +NL   S  G              P+ 
Sbjct: 711 R-IFPNISR--NISELILDETSITEFPSNLYL-ENLNLFSMEGIKSEKLWERAQPLTPLM 766

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
            M   S    L + SLS + SL +L            PS   NLH+L  L +++  N   
Sbjct: 767 TMLSPS----LRILSLSDIPSLVEL------------PSSFHNLHNLTNLSITRCKNLEI 810

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNV 213
           LP  IN L +L +L L  C RL+S P +  NV
Sbjct: 811 LPTRIN-LPSLIRLILSGCSRLRSFPDISRNV 841


>gi|297848176|ref|XP_002891969.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337811|gb|EFH68228.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 50/291 (17%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           T +KE+P  +   + L  L L GC  LV +PS+I +L  L  L +  C   E ++ T+  
Sbjct: 630 THLKELP-DLSKATNLESLNLNGCTALVEIPSSIVNLHKLSELGMSTCESLE-VIPTLIN 687

Query: 72  VESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
           + SLE               I++ ++L+   F      P S +      I       D G
Sbjct: 688 LASLER--------------IWMFQSLQLKRF------PDSPTNVKEIEI------YDTG 721

Query: 132 ALMLP-SLSGLGSLTKLDL---SDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
              LP SL     LT LD+    +       +P+ I        + LS +    + A I 
Sbjct: 722 VEELPASLRHCTRLTTLDICSNRNFKTFSTHLPTCIS------WISLSNSGIERITACIK 775

Query: 188 CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSL 247
            L NL+ L L  CK+L+SLP+LP ++E +R   C SL  + G L   K+    + F + +
Sbjct: 776 GLHNLQFLILTGCKKLKSLPELPDSLELLRAEDCESLERVSGPL---KTPTATLRFTNCI 832

Query: 248 KLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
           KL G+   AI         +     +   ++PG EIP  F ++  G+S+T+
Sbjct: 833 KLGGQARRAI---------IKGSFVRGWALLPGGEIPAKFDHRVRGNSLTI 874


>gi|227438247|gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 950

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 65/105 (61%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           ++EL L  T I+E+P SI+ L  L +L L+  ++LV LP+++  LK L+TLNL GC   E
Sbjct: 805 VKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLSGCSSLE 864

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG 108
              +   +++ L+ LD+S TAIR  PSSI  +  L+ + F GC  
Sbjct: 865 YFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVGCKS 909



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 92/198 (46%), Gaps = 30/198 (15%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           SI  L  LV L LK C NL  +PS  + L+SL+ LNL GC K EN  E    V+   EL 
Sbjct: 754 SICYLKKLVSLNLKDCSNLESVPST-SDLESLEVLNLSGCSKLENFPEISPNVK---ELY 809

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           + GT IR  PSSI   KNL  L                     L   +S    ++  S+ 
Sbjct: 810 LGGTMIREIPSSI---KNLVLLE-------------------KLDLENSRHLVILPTSMC 847

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED 199
            L  L  L+LS C   E   P     +  LK+L LS+     LP+SI+ L  LE+++   
Sbjct: 848 KLKHLETLNLSGCSSLE-YFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVG 906

Query: 200 CKRLQSLPQLPPNVEKVR 217
           CK   SL +LP N   +R
Sbjct: 907 CK---SLVRLPDNAWSLR 921



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+CL+ L L +T I+E+P SI  L  L ++   GCK+LVRLP N  SL+       +   
Sbjct: 873 MKCLKSLDLSRTAIRELPSSISYLIALEEVRFVGCKSLVRLPDNAWSLRFKVEFRQIDTE 932

Query: 61  KFENL 65
           KF  L
Sbjct: 933 KFSKL 937



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 51/181 (28%)

Query: 96  KNLKTLSFRGCNG--PPSSASCYLPFPINL-MRRSSDLGALMLPSLSGLGSLTKLDLSDC 152
           +NL+ L   GC      S + CYL   ++L ++  S+L ++  PS S L SL  L+LS C
Sbjct: 735 QNLELLDLEGCKSLESISHSICYLKKLVSLNLKDCSNLESV--PSTSDLESLEVLNLSGC 792

Query: 153 GLGEG-------------------AIPSDIGNLHSLKTLYLSKN-NFVTLPASINCLFNL 192
              E                     IPS I NL  L+ L L  + + V LP S+  L +L
Sbjct: 793 SKLENFPEISPNVKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHL 852

Query: 193 EKLKLEDCKRLQSLP--------------------QLPPNV------EKVRVNGCASLVT 226
           E L L  C  L+  P                    +LP ++      E+VR  GC SLV 
Sbjct: 853 ETLNLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVGCKSLVR 912

Query: 227 L 227
           L
Sbjct: 913 L 913



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 124 MRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTL 182
           MR S       LP L+   +L  LDL  C   E +I   I  L  L +L L   +N  ++
Sbjct: 717 MRLSYSSQLTKLPRLTSAQNLELLDLEGCKSLE-SISHSICYLKKLVSLNLKDCSNLESV 775

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNG 220
           P++ + L +LE L L  C +L++ P++ PNV+++ + G
Sbjct: 776 PSTSD-LESLEVLNLSGCSKLENFPEISPNVKELYLGG 812


>gi|418519410|ref|ZP_13085462.1| hypothetical protein WS7_00035 [Xanthomonas axonopodis pv.
           malvacearum str. GSPB2388]
 gi|410704854|gb|EKQ63333.1| hypothetical protein WS7_00035 [Xanthomonas axonopodis pv.
           malvacearum str. GSPB2388]
          Length = 579

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 119/285 (41%), Gaps = 63/285 (22%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL   +N +R LP++I SL  L+ L++  C + 
Sbjct: 138 LQHMTIDAAGLVELPDTMQQFAGLETLTL--ARNPLRALPASIASLSRLRELSIRACPEL 195

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +    +         L+ L +  T I   P+SI  ++NLK+L+           
Sbjct: 196 TELPEHLASTNASGEHEGLVNLQSLQLVQTGITSLPASIANLQNLKSLTI---------- 245

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                       RSS L AL L ++  L  L +LDL  C       P   G    LK L 
Sbjct: 246 ------------RSSPLSALGL-AIHQLPKLEELDLQGCTALRN-YPPIFGGTAPLKRLN 291

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL------------PPNV------- 213
           L   +N  TLP  I+ L  LE+L L  C  L  LP L            PP++       
Sbjct: 292 LKDCSNLRTLPLDIHRLTQLEELDLRGCVNLSRLPSLIARLPASCVIRVPPHLQAQLDQH 351

Query: 214 -------EKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLG 251
                  E  R    A +V+L GA    ++S +     + L+ + 
Sbjct: 352 RPVARTAEPERTGPTAPVVSLPGARNRARASSSATTTTELLRAVA 396



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L +  + +  + L+I  L  L +L L+GC  L   P        LK LNL  C 
Sbjct: 237 LQNLKSLTIRSSPLSALGLAIHQLPKLEELDLQGCTALRNYPPIFGGTAPLKRLNLKDCS 296

Query: 61  KFENLLETVGQVESLEELDISG 82
               L   + ++  LEELD+ G
Sbjct: 297 NLRTLPLDIHRLTQLEELDLRG 318


>gi|124007588|ref|ZP_01692292.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986886|gb|EAY26651.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 318

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 18/189 (9%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P +IEL++ L +L ++   +L +LP NI  L +L  L L    +  +L E++G +++L
Sbjct: 115 QLPTNIELITSLEKLQVEAG-SLTKLPKNIGKLTNLIELKL-NHNQLISLPESLGDLKNL 172

Query: 76  EELDISGTAIRCPPSSIFLMKNLKTLS---FRGCNGPPSSASCYLPFPINLMRRSSDL-- 130
           ++L +    ++  P++I  +KNL+ LS   FRG N         LP  I  ++   +L  
Sbjct: 173 KKLILYSNKLKSLPATIGQLKNLELLSLGDFRGTN-----ELTVLPESIGQLKSLRELHL 227

Query: 131 ---GALMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASI 186
                  LP S+  L SL +L L  CGL +  +P  IG L +L+ LYLS N    LP SI
Sbjct: 228 TGNRLTKLPKSIGQLKSLRELHLMGCGLTD--LPDSIGQLENLEVLYLSGNKLAKLPKSI 285

Query: 187 NCLFNLEKL 195
             L  L+K+
Sbjct: 286 GKLNRLKKI 294



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 37/233 (15%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LP ++ +LKSL+ L+L G  KF  L E +GQ+ SL+ L ++ + I   P SI  +K 
Sbjct: 44  LSSLPKSLGNLKSLEKLDLSGN-KFTELPEVIGQLTSLQRLVLTHSQITSFPKSIQNLKK 102

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKL--------DL 149
           L +L+           +  LP  I L+   + L  L + +    GSLTKL        +L
Sbjct: 103 LWSLNLSAIQ------TTQLPTNIELI---TSLEKLQVEA----GSLTKLPKNIGKLTNL 149

Query: 150 SDCGLGEG---AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSL 206
            +  L      ++P  +G+L +LK L L  N   +LPA+I  L NLE L L D +    L
Sbjct: 150 IELKLNHNQLISLPESLGDLKNLKKLILYSNKLKSLPATIGQLKNLELLSLGDFRGTNEL 209

Query: 207 PQLPPNVEKVRV--------NGCASLVTLLGALK----LRKSSCTIIDFVDSL 247
             LP ++ +++         N    L   +G LK    L    C + D  DS+
Sbjct: 210 TVLPESIGQLKSLRELHLTGNRLTKLPKSIGQLKSLRELHLMGCGLTDLPDSI 262


>gi|13517472|gb|AAK28808.1|AF310961_1 resistance-like protein P3-A [Linum usitatissimum]
          Length = 1110

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 158/361 (43%), Gaps = 99/361 (27%)

Query: 16   EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET-VGQVES 74
            E+P  ++ L+ LV L +  CKNL RLP  ++S        LL   + +NL  T   +++S
Sbjct: 714  EVPFHVQYLTKLVTLDINYCKNLKRLPPKLDS-------KLLKHVRMKNLEVTCCPEIDS 766

Query: 75   --LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGP--PSSASCYLPFPINLMR-RSSD 129
              LEE D+SGT++   PS+I+ +K    L   G N    P   +    F ++    R  D
Sbjct: 767  RELEEFDLSGTSLGELPSAIYNVKQNGVLRLHGKNITKFPGITTILKRFKLSGTSIREID 826

Query: 130  LG----------ALMLP-----SLSGLGSLTKL----------DLSDC------GLGEGA 158
            L            L+LP     SL+G   L  L          +L  C       L E +
Sbjct: 827  LADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSIWNMISEELFICSSPLIESLPEIS 886

Query: 159  IP-SDIGNLH-----SLKTLYLSKNNFVT-------------LPASINCLFNLEKLKLED 199
             P S + +LH     SL ++  S +N  +             LP+SI  L  L  + L D
Sbjct: 887  EPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRD 946

Query: 200  CKRLQ------------------------SLPQLPPNVEKVRVNGCASLVTLLGALKLRK 235
            CK L+                        SLP+LPPN++ + V+GC SL        L  
Sbjct: 947  CKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKTLNVSGCKSLQA------LPS 1000

Query: 236  SSCTIIDFVDSLKLLGKNGLAISMLREFLE--VVSA---PSHKFSIVVPGSEIPKWFMYQ 290
            ++C ++ +++++   G   L  ++  EF+   +V A   PS++  +   GSE+PKWF Y+
Sbjct: 1001 NTCKLL-YLNTIHFDGCPQLDQAIPGEFVANFLVHASLSPSYERQVRCSGSELPKWFSYR 1059

Query: 291  N 291
            +
Sbjct: 1060 S 1060



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L  L L +T IK +P SI+ L  L  + L+ CK+L  +P++I+ L  L TL++ GC 
Sbjct: 913  LRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGC- 971

Query: 61   KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC 106
              E ++       +L+ L++SG  +++  PS+   +  L T+ F GC
Sbjct: 972  --EIIISLPELPPNLKTLNVSGCKSLQALPSNTCKLLYLNTIHFDGC 1016


>gi|171915047|ref|ZP_02930517.1| leucine-rich-repeat protein [Verrucomicrobium spinosum DSM 4136]
          Length = 961

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 19/211 (9%)

Query: 5   RELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFEN 64
           + L L+   +KE+P ++   +GL  LTL     L R P +I SLK LK LNL G  + ++
Sbjct: 50  QHLDLEGLGLKEVPEALAKCTGLKWLTL-SHNPLKRFPESILSLKQLKHLNLDGT-QIQS 107

Query: 65  LLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG---CNGPPS----SASCYL 117
           L  + GQ+++L  L +SG A+   P+S+     L  L  R     + PP      +  +L
Sbjct: 108 LPPSFGQLQALSFLFLSGNALSSLPASLAQCSQLAGLILRNNRFTSLPPVLEHLDSLEFL 167

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
              INL+  S       L  L  L  L +L L  CGL   ++P        L+ L+L  N
Sbjct: 168 DLGINLLTGS-------LEGLQHLRKLKQLRLHGCGLT--SLPEIFSAFPELEALHLQDN 218

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
               LPAS+     L +L + D  RL SLP+
Sbjct: 219 QLTQLPASLASCKKLRRLVISD-NRLTSLPR 248


>gi|21655195|gb|AAM28912.1| NBS/LRR [Pinus taeda]
          Length = 363

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 28/220 (12%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K++P     L+ L  + +  C  L +LP +  +L +L+ +N+ GC++ E L    G + 
Sbjct: 163 LKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLA 222

Query: 74  SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           +L+ +D+S    ++  P     + NL+ +    C+G               +++  D   
Sbjct: 223 NLQHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCSG---------------LKQLPD--- 264

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                   L +L  +D+S C  G   +P   GNL +L+ + +S       LP     L N
Sbjct: 265 ----GFGNLANLQHIDMSKC-RGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLAN 319

Query: 192 LEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTLL 228
           L+ + +  C  L+ LP       N++ + ++GC+  +  L
Sbjct: 320 LQHINMSHCPGLKQLPDGFGNLANLQHIDMSGCSGFLRYL 359



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +K++P     L+ L  + + GC  L +LP    +L +L+ +++  C++ + L +  G + 
Sbjct: 91  LKQLPDVFGNLANLQHIXMSGCXGLEQLPDGFGNLANLQHIHMSRCWRLKQLPDGFGNLA 150

Query: 74  SLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-- 130
           +L+ + +S   A++  P     + NL+ +    C     S    LP     +     +  
Sbjct: 151 NLQHIHMSHCWALKQLPDGFGNLANLQHIDMSDC-----SELKKLPDDFGNLANLQHINM 205

Query: 131 -GALMLPSLS-GLGSLTKL---DLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPA 184
            G   L  L+ G G+L  L   D+SDC  G   +P   GNL +L+ +++S  +    LP 
Sbjct: 206 SGCWRLEQLTNGFGNLANLQHIDMSDC-WGLKQLPDGFGNLANLQHIHMSHCSGLKQLPD 264

Query: 185 SINCLFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
               L NL+ + +  C+ L+ LP       N++ + ++ C  L  L
Sbjct: 265 GFGNLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQL 310



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 100/222 (45%), Gaps = 8/222 (3%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++++P +   L+    + +  C  L +LP ++ +L +++ +++  C+  + L +  G +
Sbjct: 42  ELEQLPDAFGNLANXQHINMSRCWXLKQLPDDLGNLANMQXIDMRQCWGLKQLPDVFGNL 101

Query: 73  ESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP-INLMRRSSDL 130
            +L+ + +SG   +   P     + NL+ +    C         +     +  +  S   
Sbjct: 102 ANLQHIXMSGCXGLEQLPDGFGNLANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCW 161

Query: 131 GALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINC 188
               LP   G L +L  +D+SDC   +  +P D GNL +L+ + +S       L      
Sbjct: 162 ALKQLPDGFGNLANLQHIDMSDCSELK-KLPDDFGNLANLQHINMSGCWRLEQLTNGFGN 220

Query: 189 LFNLEKLKLEDCKRLQSLPQL---PPNVEKVRVNGCASLVTL 227
           L NL+ + + DC  L+ LP       N++ + ++ C+ L  L
Sbjct: 221 LANLQHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCSGLKQL 262


>gi|356570357|ref|XP_003553356.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1119

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 117/287 (40%), Gaps = 51/287 (17%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+ LL  L  L  +GC  L   P     L SL+ L L  C   E+  E +G++E++  L+
Sbjct: 674 SVGLLEKLRILDAEGCSRLKNFPPI--KLTSLEQLRLGFCHSLESFPEILGKMENIIHLN 731

Query: 80  ISGTAIRCPPSSIFLMKNLKTL-------SFRGCNGPPSSASCYLPFPINLMR------- 125
           +  T ++  P S   +  L TL          G      S+ C +P    ++        
Sbjct: 732 LKQTPVKKFPLSFRNLTRLHTLFVCFPRNQTNGWKDILVSSICTMPKGSRVIGVGWEGCE 791

Query: 126 -RSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
               D GA  + SL+   ++  LDL +C L +   P  +    ++K L LS NNF  +P 
Sbjct: 792 FSKEDEGAENV-SLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVKELDLSGNNFTVIPE 850

Query: 185 SIN-CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDF 243
            I  C F L  L L  C+RL+ +  +PPN++      C SL           SSC  +  
Sbjct: 851 CIKECRF-LTVLCLNYCERLREIRGIPPNLKYFYAEECLSLT----------SSCRSMLL 899

Query: 244 VDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
              L   G+    +                     PG++IP+WF +Q
Sbjct: 900 SQELHEAGRTFFYL---------------------PGAKIPEWFDFQ 925


>gi|168065187|ref|XP_001784536.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663917|gb|EDQ50657.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 541

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 10/222 (4%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  ++ L+ +     +GC NL  LP+ +++L SL TLN+  C    +L   +G + 
Sbjct: 135 LTSLPDELDNLTSMTTFDTRGCSNLTLLPNELDNLTSLTTLNISECSSLTSLPNELGNLT 194

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTL---SFRGCNGPPSSASCYLPFPINLMRRSSD 129
           SL  L+IS   +++     ++   NL TL    +   +  P+  S  +   I  + + S 
Sbjct: 195 SLTTLNISDYQSLKSLSKELYNFTNLTTLKINKYSSLSSLPNGLSNLISLTIFDINKCSS 254

Query: 130 LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINC 188
           L +L    L  L SLT L++S C      +P+++GNL SL T  +S+ ++ ++LP  +  
Sbjct: 255 LISLS-NELGNLTSLTTLNISVCS-NLILLPNELGNLTSLTTFNISECSSLISLPNELGN 312

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
           L +L  L +  C  L SLP    N   +    ++ C+SL++L
Sbjct: 313 LTSLTTLNISKCSSLTSLPNELGNFISLTIFDISKCSSLISL 354



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 42/250 (16%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           ++ +P SI  L  L  L ++GC +L  LP+ +++L SL T ++ GC    +L   +G + 
Sbjct: 15  LRLLPTSIRSLHALKNLNIEGCLSLTSLPNELDNLISLTTFDIEGCSSLTSLSNELGNLT 74

Query: 74  SLEELDI----SGTAI----------------RCP-----PSSIFLMKNLKTLSFRGCNG 108
           SL   DI    S T++                RC      P+ +  + +L T    GC+ 
Sbjct: 75  SLTTFDIRLYSSLTSLSNELGNLTSLITFDTRRCSSLTSLPNELSNLSSLTTFDIGGCSS 134

Query: 109 PPSSASCYLPFPINLMRRSSDLGA------LMLPS-LSGLGSLTKLDLSDCGLGEGAIPS 161
             S     LP  ++ +   +           +LP+ L  L SLT L++S+C     ++P+
Sbjct: 135 LTS-----LPDELDNLTSMTTFDTRGCSNLTLLPNELDNLTSLTTLNISECS-SLTSLPN 188

Query: 162 DIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR--- 217
           ++GNL SL TL +S   +  +L   +    NL  LK+     L SLP    N+  +    
Sbjct: 189 ELGNLTSLTTLNISDYQSLKSLSKELYNFTNLTTLKINKYSSLSSLPNGLSNLISLTIFD 248

Query: 218 VNGCASLVTL 227
           +N C+SL++L
Sbjct: 249 INKCSSLISL 258



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 31/212 (14%)

Query: 24  LSGLVQLTL---KGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDI 80
           LS L+ LT+     C +L+ L + + +L SL TLN+  C     L   +G + SL   +I
Sbjct: 238 LSNLISLTIFDINKCSSLISLSNELGNLTSLTTLNISVCSNLILLPNELGNLTSLTTFNI 297

Query: 81  SG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           S  +++   P+ +  + +L TL+   C+   S     LP         ++LG  +     
Sbjct: 298 SECSSLISLPNELGNLTSLTTLNISKCSSLTS-----LP---------NELGNFI----- 338

Query: 140 GLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLE 198
              SLT  D+S C     ++P+++GNL SL TL +S  +N   LP  +  L +L  L + 
Sbjct: 339 ---SLTIFDISKCS-SLISLPNELGNLTSLTTLNISICSNLTLLPNELGNLTSLTTLNIS 394

Query: 199 DCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
           +C  L SLP    N+     + ++ C+SL +L
Sbjct: 395 ECSSLTSLPNELGNLTSLTTLSMSECSSLTSL 426



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 14/224 (6%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  LS L    + GC +L  LP  +++L S+ T +  GC     L   +  + 
Sbjct: 111 LTSLPNELSNLSSLTTFDIGGCSSLTSLPDELDNLTSMTTFDTRGCSNLTLLPNELDNLT 170

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL----MRRSS 128
           SL  L+IS  +++   P+ +  + +L TL+        S +     F  NL    + + S
Sbjct: 171 SLTTLNISECSSLTSLPNELGNLTSLTTLNISDYQSLKSLSKELYNFT-NLTTLKINKYS 229

Query: 129 DLGALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
            L +  LP+ LS L SLT  D++ C     ++ +++GNL SL TL +S  +N + LP  +
Sbjct: 230 SLSS--LPNGLSNLISLTIFDINKCS-SLISLSNELGNLTSLTTLNISVCSNLILLPNEL 286

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
             L +L    + +C  L SLP    N+     + ++ C+SL +L
Sbjct: 287 GNLTSLTTFNISECSSLISLPNELGNLTSLTTLNISKCSSLTSL 330



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 15/194 (7%)

Query: 24  LSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG- 82
           ++ L  L LK C +L  LP++I SL +LK LN+ GC    +L   +  + SL   DI G 
Sbjct: 1   MTSLKILNLKYCNSLRLLPTSIRSLHALKNLNIEGCLSLTSLPNELDNLISLTTFDIEGC 60

Query: 83  TAIRCPPSSIFLMKNLKTLSFRGCNGPPS------SASCYLPFPINLMRRSSDLGALMLP 136
           +++    + +  + +L T   R  +   S      + +  + F     RR S L +  LP
Sbjct: 61  SSLTSLSNELGNLTSLTTFDIRLYSSLTSLSNELGNLTSLITFD---TRRCSSLTS--LP 115

Query: 137 S-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEK 194
           + LS L SLT  D+  C     ++P ++ NL S+ T      +N   LP  ++ L +L  
Sbjct: 116 NELSNLSSLTTFDIGGCS-SLTSLPDELDNLTSMTTFDTRGCSNLTLLPNELDNLTSLTT 174

Query: 195 LKLEDCKRLQSLPQ 208
           L + +C  L SLP 
Sbjct: 175 LNISECSSLTSLPN 188



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 36/204 (17%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISG-TAIRCPPS 90
           +  C +L+ LP+ + +L SL TLN+  C     L   +G + SL  L+IS  +++   P+
Sbjct: 345 ISKCSSLISLPNELGNLTSLTTLNISICSNLTLLPNELGNLTSLTTLNISECSSLTSLPN 404

Query: 91  SIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS-LSGLGSLTKLDL 149
            +  + +L TLS   C+   S                       LP+ L  L SLT L++
Sbjct: 405 ELGNLTSLTTLSMSECSSLTS-----------------------LPNELDNLTSLTTLNI 441

Query: 150 SDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
           S       ++P+++GNL SL T  +S  ++  +LP   N L NL  L   D  R  SL  
Sbjct: 442 SKYS-SLTSLPNELGNLTSLTTFDISYCSSLTSLP---NELGNLSSLTTFDIGRYSSLIS 497

Query: 209 LPPNVEKVR------VNGCASLVT 226
           LP  ++ +         GC+SL +
Sbjct: 498 LPNELDNITSLTTFDTRGCSSLTS 521


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 27/208 (12%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L++L L +  ++ +P  +     L +L L+G   L +LP N+ +L+ LK LNL    
Sbjct: 299 LTALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNA-LTQLPKNLGNLQQLKRLNL-DAN 356

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L E++G++++LE LD+   A++  P S+  ++ LK L  R       +A   LP  
Sbjct: 357 RLVGLPESLGKLKNLESLDLRENALKKLPESLGGLEKLKNLQLR------KNALTKLP-- 408

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                           S+  L +L  LD    G     +P  IG L  LK + L+ N   
Sbjct: 409 ---------------ESIGKLQNLESLD--SWGNALEGLPESIGGLKKLKKMNLAYNQLT 451

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQ 208
            LP S+  L NL+ L L +   LQ LP+
Sbjct: 452 ELPESLGKLENLQTLNLWNNSTLQKLPK 479



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 43/182 (23%)

Query: 32  LKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSS 91
           LK  KNL  L  N N+L++L               + +G ++SL+EL +    ++  P  
Sbjct: 204 LKKLKNLEVLKLNNNALRTLP--------------KELGSLKSLKELHLQNNLLKTVPKE 249

Query: 92  IFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSD 151
           I  ++ LK L+ +                   M R   L       L  L  L +LDL +
Sbjct: 250 IGDLQQLKKLNLK-------------------MNRVEGLPK----ELGKLKQLEQLDLYN 286

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
             L    +P ++G L +LK L LS+N    LP  +     LEKL L    R  +L QLP 
Sbjct: 287 NRLK--TVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEKLNL----RGNALTQLPK 340

Query: 212 NV 213
           N+
Sbjct: 341 NL 342



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 16/181 (8%)

Query: 40  RLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLK 99
           +LP  +  L+ L TLNL    + + L   + ++  L+ L+I G  I+  P+ +  +  L 
Sbjct: 95  KLPEFLFKLRHLHTLNL-AHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLA 153

Query: 100 TLS-----------FRGCNGPPSSASCYLPFPINLMRRS-SDLGALMLPSLSGLGSLTKL 147
           TL             R  N   ++    L  P  + +     L  + +  L  L +L  L
Sbjct: 154 TLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLEVL 213

Query: 148 DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
            L++  L    +P ++G+L SLK L+L  N   T+P  I  L  L+KL L+   R++ LP
Sbjct: 214 KLNNNALR--TLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLK-MNRVEGLP 270

Query: 208 Q 208
           +
Sbjct: 271 K 271


>gi|410939204|ref|ZP_11371039.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785709|gb|EKR74665.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 1615

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L +   +  P+++     L  L+L+ C NL  +P +I +LK L  L  L   +   L 
Sbjct: 1225 LNLSEIKFERFPIAVTTFKNLTSLSLREC-NLSEVPESIGNLKQLIYL-YLNSNQLTTLP 1282

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L+EL ++       P ++  +KNLKT   R    P S+    LP  I  +  
Sbjct: 1283 ASLGTLEQLKELHLNQNQFTRIPDAVLSLKNLKTFWARW--NPIST----LPNEIGNLTS 1336

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSDCGLGE---------------------GAI 159
              DL       + +  ++  L SLT+++LS     E                       +
Sbjct: 1337 LEDLSLYENQLSTLPTTIQNLSSLTRIELSKNNFSEFPEPILHLKNLKHLDIGGNKIRQL 1396

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK L + +    +LP SI  L  LE + L   K L+ +P    N+E ++
Sbjct: 1397 PETIGNLSNLKFLDIKETWIESLPQSIQNLTQLETIYLPKAK-LRDIPDFLTNIESLK 1453



 Score = 48.1 bits (113), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            +  L +L L +  +  +P +I+ LS L ++ L    N    P  I  LK+LK L++ G  
Sbjct: 1334 LTSLEDLSLYENQLSTLPTTIQNLSSLTRIELSK-NNFSEFPEPILHLKNLKHLDI-GGN 1391

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
            K   L ET+G + +L+ LDI  T I   P SI  +  L+T+
Sbjct: 1392 KIRQLPETIGNLSNLKFLDIKETWIESLPQSIQNLTQLETI 1432



 Score = 43.5 bits (101), Expect = 0.21,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 83/201 (41%), Gaps = 30/201 (14%)

Query: 42   PSNINSLKSLKTLNLLGC-FKFENLLETVGQVESLEELDISG--TAIRCP---------- 88
            PS+++ LK+LK + L     K  N+L     +E +E  +I G  T   C           
Sbjct: 1164 PSSLSELKNLKKIELQNWNLKDLNVLNYCTNLEKIELRNIQGFETDFDCSELLNKSKAAI 1223

Query: 89   ------------PSSIFLMKNLKTLSFRGCNGPPSSASC-YLPFPINLMRRSSDLGALML 135
                        P ++   KNL +LS R CN      S   L   I L   S+ L  L  
Sbjct: 1224 HLNLSEIKFERFPIAVTTFKNLTSLSLRECNLSEVPESIGNLKQLIYLYLNSNQLTTLP- 1282

Query: 136  PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL 195
             SL  L  L +L L+        IP  + +L +LKT +   N   TLP  I  L +LE L
Sbjct: 1283 ASLGTLEQLKELHLNQNQFTR--IPDAVLSLKNLKTFWARWNPISTLPNEIGNLTSLEDL 1340

Query: 196  KLEDCKRLQSLPQLPPNVEKV 216
             L +  +L +LP    N+  +
Sbjct: 1341 SLYE-NQLSTLPTTIQNLSSL 1360


>gi|356560031|ref|XP_003548299.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1091

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 13/233 (5%)

Query: 4   LRELLLDKTD-IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LREL  ++ + +  +  SI  L+ L +L+  GC  L   P    +L SL+TL L  C   
Sbjct: 654 LRELSFEECESLVAVDDSIGFLNKLKKLSAYGCSKLKSFPPL--NLTSLQTLELSQCSSL 711

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---------GPPSSA 113
           E   E +G++E+++ L + G  I+    S   +  L+ L+ R C            P   
Sbjct: 712 EYFPEIIGEMENIKHLFLYGLPIKELSFSFQNLIGLRWLTLRSCGIVKLPCSLAMMPELF 771

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
             ++ +        S+ G   + S+       +    DC L +    +       +  L 
Sbjct: 772 EFHMEYCNRWQWVESEEGEKKVGSIPS-SKAHRFSAKDCNLCDDFFLTGFKTFARVGHLN 830

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
           LS NNF  LP     L  L  L + DC+ LQ +  LPPN+E      CASL +
Sbjct: 831 LSGNNFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYFDARNCASLTS 883


>gi|145326644|ref|NP_001077769.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324936|gb|AAG52415.1|AC011622_3 putative disease resistance protein; 17840-13447 [Arabidopsis
           thaliana]
 gi|332196021|gb|AEE34142.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1131

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 35/310 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +ECL EL + ++ ++++    + L  L  + L   KNL  LP ++++  +L+   L  C 
Sbjct: 606 LECLVELNMRESLVEKLWEGTQHLKNLKYMDLTESKNLKELP-DLSNATNLEYFYLDNCE 664

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
               +  +   +  LE L+++    ++  P+ + L  ++K ++ +GC       S    F
Sbjct: 665 SLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLT-SVKQVNMKGC-------SRLRKF 716

Query: 120 P-----INLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEG--AIPSDIGNLHSLKT 171
           P     I  +  S +     +P S++    L  LD+S     +G   +P+      SL+ 
Sbjct: 717 PVISRHIEALDISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPT------SLRH 770

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL 231
           L LS  +  ++P  I  L  LE+L L  C RL SLP LP +++ +    C SL ++   L
Sbjct: 771 LNLSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPL 830

Query: 232 KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
               +    + F +  KL G+   AI        +  +     S+++PG E+P  F ++ 
Sbjct: 831 ---YTPSARLSFTNCFKLGGEAREAI--------IRRSSDSTGSVLLPGREVPAEFDHRA 879

Query: 292 EGSSITVTRP 301
           +G+S+++  P
Sbjct: 880 QGNSLSILLP 889


>gi|297842029|ref|XP_002888896.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334737|gb|EFH65155.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1169

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 20/271 (7%)

Query: 51   LKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
            L  LNL+     + +   +G ++SLE+LD+SG   R  P+S   +  LK      C    
Sbjct: 810  LVELNLIN-LNIQKIPVDIGLMQSLEKLDLSGNDFRSLPASTKNLSKLKYARLSNCIKLK 868

Query: 111  SSASCYLPFPINLMRRSSDLGALMLPSL---SGLGSLTKLDLSDCGLGEGAIPSDIGNLH 167
            +         + L   S+    L LP      G   L +L+L +C     A+   +    
Sbjct: 869  TFPELTELQTLKLSGCSNLESLLELPCAVQDEGRFRLLELELDNCK-NLQALSEQLSRFT 927

Query: 168  SLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
            +L  L LS ++F  +P SI  L +LE + L +CK+L+S+ +LP +++ +  +GC SL  +
Sbjct: 928  NLIHLDLSSHDFDAIPESIKELSSLETMCLNNCKKLKSVEELPQSLKHLYAHGCDSLENV 987

Query: 228  LGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWF 287
              +   R  S   +D      L     L    L +  +     S +F + +PG+E+P+ F
Sbjct: 988  SLS---RNHSIKHLDLSHCFGLQQDEQLITLFLND--KCSQEVSQRF-LCLPGNEVPRNF 1041

Query: 288  MYQNEGSS--ITVTRPSYLCNMNQVVGYAAC 316
              Q+ G+S  I++  P+ L       G+AAC
Sbjct: 1042 DNQSHGTSTKISLFTPTLL-------GFAAC 1065


>gi|357513721|ref|XP_003627149.1| Disease resistance protein [Medicago truncatula]
 gi|355521171|gb|AET01625.1| Disease resistance protein [Medicago truncatula]
          Length = 1630

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 146/330 (44%), Gaps = 63/330 (19%)

Query: 24   LSG---LVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL-------------- 66
            LSG   L QL L GC+ L  L  +  S  +L TL L  C K E+L+              
Sbjct: 724  LSGALKLKQLRLSGCEELCELQPSAFSKDTLDTLLLDRCIKLESLMGEKHLTSLKYFSVK 783

Query: 67   ------ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
                  E     +S+  LD+S T I+    S+  M NL  L+    N         LP  
Sbjct: 784  GCKSLKEFSLSSDSINRLDLSKTGIKILHPSLGDMNNLIWLNLEDLN------LTNLPIE 837

Query: 121  INLMRRSSDL---------GALMLPSLSGLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLK 170
            ++ +R  ++L          + +     GL  L  L L DC  L E  +P++I +L SL 
Sbjct: 838  LSHLRSLTELRVSKCNVVTKSKLEALFDGLTLLRLLHLKDCCNLIE--LPANISSLESLH 895

Query: 171  TLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT---- 226
             L L  ++   LPASI  L  LE   L++C +L+ LP+LP ++++ + + C SL+T    
Sbjct: 896  ELRLDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSLITVSTL 955

Query: 227  ------LLGALKLRKSSCTIIDFVD--SLKLLGKNGLAISMLREFLEVVSAP----SHKF 274
                  ++G  K      +I+  +D  SL  + ++ +       F  V+       +H F
Sbjct: 956  KTFSINMIGQKKYISFKNSIMLELDGPSLDCITEDAVLTMKSAAFHNVLVRKYRFQTHSF 1015

Query: 275  S-----IVVPGSEIPKWFMYQN-EGSSITV 298
            +     + +PG  +P+ F +++   SSITV
Sbjct: 1016 NYNRAEVCLPGRRVPREFKHRSTTSSSITV 1045


>gi|104647789|gb|ABF74399.1| disease resistance protein [Arabidopsis lyrata]
          Length = 223

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 32/226 (14%)

Query: 26  GLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL------------------LE 67
            L +L L+GC +L++LP  + +++SL  LN+ GC     L                  LE
Sbjct: 1   NLERLNLEGCTSLLKLPKEMENMESLVFLNMRGCKSLTFLHRMNLSSLTILILSDCSKLE 60

Query: 68  TVGQV-ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
               + E+LE L + GTAI+  P ++  +K L  L+ +GC    S   C        + +
Sbjct: 61  EFEVISENLEALYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPEC--------LGK 112

Query: 127 SSDLGALMLPSLSGLGSLTK----LDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN-NFVT 181
              L  L+L + S L S+ K    +      L +G    DI  ++SL+ L LS+N   + 
Sbjct: 113 QKALEELILSNCSKLESVPKAVKNMKKLRILLLDGTRIKDIPKINSLERLSLSRNIAMIH 172

Query: 182 LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTL 227
           L  S++   NL+ + +++C+ L+ LP LP ++E + V GC  L T+
Sbjct: 173 LQDSLSGFSNLKCVVMKNCENLRYLPSLPRSLEYLNVYGCERLETV 218



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 46/88 (52%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L  L LD T IK +P ++  L  L  L +KGC  L  LP  +   K+L+ L L  C K
Sbjct: 67  ENLEALYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPECLGKQKALEELILSNCSK 126

Query: 62  FENLLETVGQVESLEELDISGTAIRCPP 89
            E++ + V  ++ L  L + GT I+  P
Sbjct: 127 LESVPKAVKNMKKLRILLLDGTRIKDIP 154


>gi|168042657|ref|XP_001773804.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674919|gb|EDQ61421.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 34/225 (15%)

Query: 9   LDKTDIKE------MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           L+ +D+ E      +P  +  L+ L  L +  C +L  LP+ + +L SL TLN+ GC   
Sbjct: 135 LNISDVNECSSLTLLPNELANLTSLTTLDVNKCSSLTSLPNELGNLTSLTTLNIGGCSSM 194

Query: 63  ENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            +L   +G + SL  L+I G +++   P+ +  + +L TL   GC     S+   LP   
Sbjct: 195 TSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLKIGGC-----SSLTSLP--- 246

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
                 ++LG L         SLT L++  C     ++P+++GNL SL TL +S  ++  
Sbjct: 247 ------NELGNLT--------SLTTLNIGGCS-SMTSLPNELGNLTSLTTLNISGCSSLT 291

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCA 222
           +LP  +  L +L  L +  C  L SLP    N+     + ++GC+
Sbjct: 292 SLPNELGNLTSLTTLNISGCSSLTSLPNELGNLTSLTTLNISGCS 336



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 33/220 (15%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  ++ ++ L  L LK CK L  LP++I +L  LK +N+  C    +L   +G + SL 
Sbjct: 2   VPNDLQYMTSLKILNLKDCKQLHSLPTSIGNLLYLKNINIGRCSSLTSLPNELGNLTSLT 61

Query: 77  ELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALML 135
            L+I G +++   P+ +  + +L TL                     +M R S L +  L
Sbjct: 62  TLNIGGCSSMTSLPNELGNLTSLTTL---------------------IMWRCSSLTS--L 98

Query: 136 PS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN----FVTLPASINCLF 190
           P+ L  L SLT LD+S+C     ++P+++GNL SL TL +S  N       LP  +  L 
Sbjct: 99  PNELGNLTSLTTLDVSECS-SLTSLPNELGNLTSLTTLNISDVNECSSLTLLPNELANLT 157

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
           +L  L +  C  L SLP    N+     + + GC+S+ +L
Sbjct: 158 SLTTLDVNKCSSLTSLPNELGNLTSLTTLNIGGCSSMTSL 197



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 27/222 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + +  +P  +  L+ L  L + GC ++  LP+ + +L SL TL +  C    +L   +G 
Sbjct: 45  SSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLIMWRCSSLTSLPNELGN 104

Query: 72  VESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  LD+S  +++   P+ +  + +L TL+    N   S                   
Sbjct: 105 LTSLTTLDVSECSSLTSLPNELGNLTSLTTLNISDVNECSSLT----------------- 147

Query: 131 GALMLPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINC 188
              +LP+ L+ L SLT LD++ C     ++P+++GNL SL TL +   ++  +LP  +  
Sbjct: 148 ---LLPNELANLTSLTTLDVNKCS-SLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGN 203

Query: 189 LFNLEKLKLEDCKRLQSLPQLPPNVEK---VRVNGCASLVTL 227
           L +L  L +  C  + SLP    N+     +++ GC+SL +L
Sbjct: 204 LTSLTTLNIGGCSSMTSLPNELGNLTSLTTLKIGGCSSLTSL 245


>gi|110741602|dbj|BAE98749.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 35/310 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +ECL EL + ++ ++++    + L  L  + L   KNL  LP ++++  +L+   L  C 
Sbjct: 439 LECLVELNMRESLVEKLWEGTQHLKNLKYMDLTESKNLKELP-DLSNATNLEYFYLDNCE 497

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
               +  +   +  LE L+++    ++  P+ + L  ++K ++ +GC       S    F
Sbjct: 498 SLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLT-SVKQVNMKGC-------SRLRKF 549

Query: 120 P-----INLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEG--AIPSDIGNLHSLKT 171
           P     I  +  S +     +P S++    L  LD+S     +G   +P+      SL+ 
Sbjct: 550 PVISRHIEALDISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPT------SLRH 603

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL 231
           L LS  +  ++P  I  L  LE+L L  C RL SLP LP +++ +    C SL ++   L
Sbjct: 604 LNLSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPL 663

Query: 232 KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
               +    + F +  KL G+   AI        +  +     S+++PG E+P  F ++ 
Sbjct: 664 ---YTPSARLSFTNCFKLGGEAREAI--------IRRSSDSTGSVLLPGREVPAEFDHRA 712

Query: 292 EGSSITVTRP 301
           +G+S+++  P
Sbjct: 713 QGNSLSILLP 722


>gi|145326642|ref|NP_001077768.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145337141|ref|NP_176562.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196019|gb|AEE34140.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196020|gb|AEE34141.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 35/310 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +ECL EL + ++ ++++    + L  L  + L   KNL  LP ++++  +L+   L  C 
Sbjct: 439 LECLVELNMRESLVEKLWEGTQHLKNLKYMDLTESKNLKELP-DLSNATNLEYFYLDNCE 497

Query: 61  KFENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
               +  +   +  LE L+++    ++  P+ + L  ++K ++ +GC       S    F
Sbjct: 498 SLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLT-SVKQVNMKGC-------SRLRKF 549

Query: 120 P-----INLMRRSSDLGALMLP-SLSGLGSLTKLDLSDCGLGEG--AIPSDIGNLHSLKT 171
           P     I  +  S +     +P S++    L  LD+S     +G   +P+      SL+ 
Sbjct: 550 PVISRHIEALDISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPT------SLRH 603

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGAL 231
           L LS  +  ++P  I  L  LE+L L  C RL SLP LP +++ +    C SL ++   L
Sbjct: 604 LNLSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPL 663

Query: 232 KLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQN 291
               +    + F +  KL G+   AI        +  +     S+++PG E+P  F ++ 
Sbjct: 664 ---YTPSARLSFTNCFKLGGEAREAI--------IRRSSDSTGSVLLPGREVPAEFDHRA 712

Query: 292 EGSSITVTRP 301
           +G+S+++  P
Sbjct: 713 QGNSLSILLP 722


>gi|297809025|ref|XP_002872396.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318233|gb|EFH48655.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 918

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 26/244 (10%)

Query: 1   MECLREL-LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGC 59
           ++CL+ + L    ++KE P  + L + L  L+L  C +LV +PS I +L  L  LN+LGC
Sbjct: 628 LQCLKTINLFGSQNLKEFP-DLSLATSLETLSLGYCLSLVEVPSTIGNLNKLTYLNMLGC 686

Query: 60  FKFENL-----LETVGQV---------------ESLEELDISGTAIRCPPSSIFLMKNLK 99
              E L     L+++  +                ++ EL ++  A+   PS++ L +NL 
Sbjct: 687 HNLETLPADINLKSLSHLILNGCSRLKIFPALSTNISELTLNLLAVEKFPSNLHL-ENLV 745

Query: 100 TLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAI 159
            L  +G           +   +  M          +P LS   +L  L+L +C L    +
Sbjct: 746 YLIIQGMTSVKLWDGVKVLTSLKTMDLRDSKNLKEIPDLSMASNLLILNLREC-LSLVEL 804

Query: 160 PSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           PS I NLH+L  L +S   N  T P  +N L +L+++ L  C RL+  P +  N+ ++ +
Sbjct: 805 PSTIRNLHNLAELDMSGCTNLETFPNDVN-LQSLKRINLARCSRLKIFPDISTNISELDL 863

Query: 219 NGCA 222
           +  A
Sbjct: 864 SQTA 867


>gi|297790454|ref|XP_002863117.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308941|gb|EFH39376.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 955

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 58/317 (18%)

Query: 16  EMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESL 75
           ++P SI   + L  L L GC +LV LPS+I +L +LK L+L        L  ++G + +L
Sbjct: 566 KLPSSIGNATNLELLDLGGCSSLVELPSSIGNLINLKELHLSSLSSLVELPSSIGNLINL 625

Query: 76  EELDISGTAIRCP-PSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALM 134
           +ELD+S  +     P  I    NL+ L+   C     S+   LPF I  +++   L    
Sbjct: 626 KELDLSSLSCLVELPFWIGNATNLEVLNLDQC-----SSLVKLPFSIGNLQKLQTLTLRG 680

Query: 135 ------LPSLSGLGSLTKLDLSDCGLGEG---AIPS-------DIGNLHSLKT------- 171
                 LP+   LGSL +LDL+DC L +    +I S       D+    +LK        
Sbjct: 681 CSKLEDLPANIKLGSLGELDLTDCLLLKRFPLSIKSWSRLNEVDMSYTENLKNFPHAFDI 740

Query: 172 ---LYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
              L+++      +P  +     L  L L+ CK+L SLPQ+P ++  +    C S     
Sbjct: 741 ITGLHMTNTEIQEVPPWVKKFSRLTVLILKGCKKLVSLPQIPDSISYIDAQDCES----- 795

Query: 229 GALKLRKSSCTI------IDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSE 282
               L +  C+       + F    KL   N  A  +      ++  P+ + S V+PG E
Sbjct: 796 ----LERVDCSFHNPKIWLIFSKCFKL---NQEARDL------IIQTPTSR-SAVLPGRE 841

Query: 283 IPKWFMYQN-EGSSITV 298
           +P +F +Q+  G S+T+
Sbjct: 842 VPAYFTHQSTTGGSLTI 858


>gi|357499675|ref|XP_003620126.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495141|gb|AES76344.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1013

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 59/320 (18%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF- 62
           L++L LD ++     L +  L  LV+ + + C+NLV +  +I  L  LK L+  GC    
Sbjct: 640 LKKLNLDNSECLTQILDVSGLKNLVEFSFRKCENLVTIHDSIGFLNKLKILDAYGCSNLK 699

Query: 63  ---------------------ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
                                E   E +G++E++ ++   GT+I+  P S   +  L+ L
Sbjct: 700 SFPPLKLTSLEALGLSYCNSLERFPEILGKMENITDMFCVGTSIKELPFSFQNLTRLEKL 759

Query: 102 SFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGL--GSLTKLDLSDCGLGEGAI 159
              G +G     S  L  P  L   S  L       LS +    +  L L  C   +  +
Sbjct: 760 RLWG-DGKQILQSSILTMPKLLTDASGCLFPKQNAELSSIVPSDVRILGLPKCNPSDDFL 818

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASIN--CLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           P  +    +++ L LS NNF  LP  +   CL +L  L +  CK L+ +  +PP ++++ 
Sbjct: 819 PIILTWFANVEHLDLSWNNFTVLPKCLEQCCLLSL--LNVNSCKYLREIQGVPPKLKRLS 876

Query: 218 VNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIV 277
              C SL ++   + L +              L + G A     EF            I 
Sbjct: 877 ALHCKSLTSMSRRMLLNQE-------------LHEYGGA-----EF------------IF 906

Query: 278 VPGSEIPKWFMYQNEGSSIT 297
              +  P+WF +QN G SI+
Sbjct: 907 TRSTRFPEWFEHQNRGPSIS 926


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 36/245 (14%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LREL L+   +K +P  I  L  L QL L   + L  LP  I  L++L+ L+L    
Sbjct: 137 LKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQ-LKTLPKEIGQLQNLRELHL-SYN 194

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           + + L   +GQ+++L+ LD++   ++  P  I  +KNL+ L            + +   P
Sbjct: 195 QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNN--------NQFKTVP 246

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNF 179
                               +G L  L + D G  +   +P +IG L +L+ L+L+ N F
Sbjct: 247 ------------------EEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQF 288

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR-----VNGCASLVTLLGALK-L 233
            T+P     L NL+ L L +  +L +LP     ++ +R      N   +L   +G LK L
Sbjct: 289 KTVPEETGQLKNLQMLSL-NANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNL 347

Query: 234 RKSSC 238
           +K S 
Sbjct: 348 KKLSL 352



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 16/177 (9%)

Query: 38  LVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKN 97
           L  LP  I  L++L+ L L    +   L + +GQ+++L+EL +SG  +   P  I  +KN
Sbjct: 58  LKTLPKEIGQLQNLQVLEL-NNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKN 116

Query: 98  LKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-----GALMLPSLSG-LGSLTKLDLSD 151
           L+TL          +    LP  I  ++   +L         LP   G L +L +L+L  
Sbjct: 117 LQTLVL------SKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYA 170

Query: 152 CGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
             L    +P +IG L +L+ L+LS N   TL A I  L NL+ L L D  +L++LP+
Sbjct: 171 NQLK--TLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLND-NQLKTLPK 224



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LREL L    +K +   I  L  L  L L   + L  LP  I  LK+L+ L+L    
Sbjct: 183 LQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQ-LKTLPKEIGQLKNLQMLDL-NNN 240

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG----PPSSASCY 116
           +F+ + E +GQ+++L+ LD+     +  P  I  +KNL+ L F   N     P  +    
Sbjct: 241 QFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQML-FLNNNQFKTVPEETGQLK 299

Query: 117 LPFPINLMRRSSDLGALM-LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
                NL   S +   L  LP+ +  L +L +L LS   L    + ++IG L +LK L L
Sbjct: 300 -----NLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLK--TLSAEIGQLKNLKKLSL 352

Query: 175 SKNNFVTLPASI 186
             N   TLP  I
Sbjct: 353 RDNQLTTLPKEI 364



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 40/223 (17%)

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           K + L + +GQ+++L+ L+++   +   P  I  ++NL+ L   G        +    FP
Sbjct: 57  KLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSG--------NQLTTFP 108

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   ++G L         +L  L LS   L    +P +IG L +L+ LYL+ N   
Sbjct: 109 -------KEIGQL--------KNLQTLVLSKNRLT--TLPKEIGQLKNLRELYLNTNQLK 151

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR-----VNGCASLVTLLGALKLRK 235
           TLP  I  L NL++L L    +L++LP+    ++ +R      N   +L   +G L+   
Sbjct: 152 TLPKEIGQLKNLQQLNLY-ANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQ--- 207

Query: 236 SSCTIIDFVDS-LKLLGKNGLAISMLREFLEVVSAPSHKFSIV 277
            +  ++D  D+ LK L K    I  L+  L+++   +++F  V
Sbjct: 208 -NLQVLDLNDNQLKTLPK---EIGQLKN-LQMLDLNNNQFKTV 245


>gi|242067817|ref|XP_002449185.1| hypothetical protein SORBIDRAFT_05g006190 [Sorghum bicolor]
 gi|241935028|gb|EES08173.1| hypothetical protein SORBIDRAFT_05g006190 [Sorghum bicolor]
          Length = 1268

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 27/236 (11%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L  L +      E+P +I     L  L L GCK  V LP +I  LK L+TL      
Sbjct: 593 LEHLAYLEIHNVSCTELPEAISGCWNLQSLHLIGCKGFVTLPKSIGELKKLQTLEFNCIT 652

Query: 61  KFENLLETVGQVESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
             E L +++G    L+ L ++    +R  PSS+  ++ L  L   GC             
Sbjct: 653 DLETLPQSIGNCRDLQSLQLNYCGKLREIPSSVGRLRKLSVLHIIGC------------- 699

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                   S L  L+L     L +L  ++L  C  G   +PS   +   L+TL+LS+   
Sbjct: 700 --------SSLKQLLLQFNGELSNLLTVNLHGCR-GLEDLPSKF-SCPKLRTLHLSETKI 749

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV---NGCASLVTLLGALK 232
             LP  I  +  LE + L++CK L  LP+   N++ + V    GC+ L  +   L+
Sbjct: 750 TVLPQWITSIGTLECIYLQNCKELLELPKDIINLKHLEVLNLVGCSKLQCMPSGLR 805



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L +T I  +P  I  +  L  + L+ CK L+ LP +I +LK L+ LNL+GC K +
Sbjct: 739 LRTLHLSETKITVLPQWITSIGTLECIYLQNCKELLELPKDIINLKHLEVLNLVGCSKLQ 798

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLS 102
            +   + Q+  L  L           + I  ++NL  +S
Sbjct: 799 CMPSGLRQLTRLRNLGSFAVGCGGDDARISELENLDMIS 837



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            I  +P S + L+ L+ L +     +  LP  I  L SL+ LNL  C     L E +GQ+ 
Sbjct: 1148 IDSLPQSAKYLTSLISLQICRWDKMKELPDVIQHLTSLQVLNLGLCPALTVLPECIGQLS 1207

Query: 74   SLEELDISGT-AIRCPPSSIFLMKNLKTL 101
            +L  L I    A++C P S+  +  L+ L
Sbjct: 1208 ALRSLQIQHCYALQCLPQSLQRLTALREL 1236



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
            +KE+P  I+ L+ L  L L  C  L  LP  I  L +L++L +  C+  + L +++ ++ 
Sbjct: 1172 MKELPDVIQHLTSLQVLNLGLCPALTVLPECIGQLSALRSLQIQHCYALQCLPQSLQRLT 1231

Query: 74   SLEELDIS 81
            +L EL IS
Sbjct: 1232 ALRELHIS 1239


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L  L L     L+ LP  I  L++L+ LNL    +  NL E +G++++L+
Sbjct: 161 LPKEIGKLQNLRDLDL-SSNQLMTLPKEIGKLQNLQKLNLTRN-RLANLPEEIGKLQNLQ 218

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL-----G 131
           EL ++   +   P  I  ++NL+ L   G N   ++    LP  I  +++   L      
Sbjct: 219 ELHLTDNQLTTLPKEIEKLQNLQWL---GLN---NNQLTTLPKEIGKLQKLEALHLENNQ 272

Query: 132 ALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLF 190
              LP   G L +L  L LS+  L    +P +IG L  L+ L+L  N   TLP  I  L 
Sbjct: 273 LTTLPKEIGKLQNLQWLGLSNNQL--TTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQ 330

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVR 217
           NL++L+L D  RL +LP+    ++K++
Sbjct: 331 NLQELRL-DYNRLTTLPEEIEKLQKLK 356



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 35/218 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+EL LD   +  +P  IE L  L +L   G +    +P  I +L++L+ LNL    
Sbjct: 329 LQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQ-FTTVPEEIWNLQNLQALNLYSN- 386

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  +L + +G +++L+ L +S   +   P  I  ++NL+ L              YL   
Sbjct: 387 QLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLL--------------YL--- 429

Query: 121 INLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                  SD     LP   G L +L +L L D  L    +P +I NL SL+ LYLS N  
Sbjct: 430 -------SDNQLTTLPKEIGKLQNLQELYLRDNQLT--TLPKEIENLQSLEYLYLSDNPL 480

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            + P  I  L +L+  +LE+      +P L P  EK+R
Sbjct: 481 TSFPEEIGKLQHLKWFRLEN------IPTLLPQKEKIR 512



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 125 RRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           R++S+     LP   G L +L  LDLS   L    +P +IG L +L+ L L++N    LP
Sbjct: 151 RKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLM--TLPKEIGKLQNLQKLNLTRNRLANLP 208

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             I  L NL++L L D +    L  LP  +EK++
Sbjct: 209 EEIGKLQNLQELHLTDNQ----LTTLPKEIEKLQ 238



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 43/246 (17%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L+   +  +P  I  L  L  L L+  + L  LP  I  L++L+ L L    
Sbjct: 237 LQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQ-LTTLPKEIGKLQNLQWLGL-SNN 294

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G+++ L+EL +    +   P  I  ++NL+ L          +    LP  
Sbjct: 295 QLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLD------YNRLTTLPEE 348

Query: 121 INLMRR------SSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIG---------- 164
           I  +++      S +    +   +  L +L  L+L    L   ++P +IG          
Sbjct: 349 IEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLT--SLPKEIGNLQNLQLLYL 406

Query: 165 -------------NLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPP 211
                         L +L+ LYLS N   TLP  I  L NL++L L D +    L  LP 
Sbjct: 407 SDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQ----LTTLPK 462

Query: 212 NVEKVR 217
            +E ++
Sbjct: 463 EIENLQ 468


>gi|456984028|gb|EMG20190.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 229

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 28/208 (13%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LREL L       +P  I  L  L  L L G   L  +PS I  LK+L+ LNL    + E
Sbjct: 12  LRELYLYDCGFSTLPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNL-EANELE 69

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP--- 120
            L + +GQ+ +L+ L +    ++  P+ I  +K L+ L          S + +  FP   
Sbjct: 70  RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFPKEI 121

Query: 121 --------INLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                   +NL R   ++L A     +  L +L +LDL+D       +P +IG L  L+T
Sbjct: 122 GKLENLQTLNLQRNQLTNLTA----EIGQLQNLQELDLNDNQFT--VLPKEIGKLKKLQT 175

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKLED 199
           L L  N   TLP  I  L NL+ L L++
Sbjct: 176 LDLRNNQLTTLPTEIGQLQNLQWLYLQN 203



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 46/204 (22%)

Query: 41  LPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKT 100
           LP  I+ LK+LK L L G    +N+   +GQ+++LE L++    +   P  I  ++NL+ 
Sbjct: 25  LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQR 83

Query: 101 LSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIP 160
           LS           +    FP                 +  L  L KLDLS         P
Sbjct: 84  LSLH--------QNTLKIFP---------------AEIEQLKKLQKLDLSVNQFT--TFP 118

Query: 161 SDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLED------------CKRLQSLPQ 208
            +IG L +L+TL L +N    L A I  L NL++L L D             K+LQ+L  
Sbjct: 119 KEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLD- 177

Query: 209 LPPNVEKVRVNGCASLVTLLGALK 232
                  +R N   +L T +G L+
Sbjct: 178 -------LRNNQLTTLPTEIGQLQ 194


>gi|238478956|ref|NP_001154444.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196040|gb|AEE34161.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 988

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 33/306 (10%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL++  + ++ +    + L  L ++ LKG  NL  LP N+++   ++ L L  C  
Sbjct: 572 EYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALP-NLSNATKMEILKLSDCKS 630

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCY 116
              +  +   ++ LE+L + G  ++   P+ + L + L  L  RGC    N P  S   Y
Sbjct: 631 LVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNL-EFLYDLDMRGCSRLRNIPVMSTRLY 689

Query: 117 LPFPINLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGA--IPSDIGNLHSLKTLY 173
               +N+   +  D+ A    S++    +T L ++      G   +P        ++ L 
Sbjct: 690 F---LNISETAVEDVSA----SITSWHHVTHLSINSSAKLRGLTHLP------RPVEFLD 736

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
           LS +    +P  I   + L+ L +  C+RL SLP+LP +++ +  + C SL T+    K 
Sbjct: 737 LSYSGIERIPNCIKDRYLLKSLTISGCRRLTSLPELPASLKFLVADDCESLETVFCPFKT 796

Query: 234 RKS-SCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNE 292
            K     I +F +  KL  +   AI         +  P    + ++PG E+P  F ++  
Sbjct: 797 SKCWPFNIFEFTNCFKLDQEARRAI---------IQRPFFHGTTLLPGREVPAEFDHRGR 847

Query: 293 GSSITV 298
           G+++T+
Sbjct: 848 GNTLTI 853


>gi|417771010|ref|ZP_12418908.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418682662|ref|ZP_13243876.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418716202|ref|ZP_13276216.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116971|ref|ZP_15577343.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400325584|gb|EJO77859.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946978|gb|EKN96984.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410011470|gb|EKO69589.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410787885|gb|EKR81614.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 267

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 36/233 (15%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L++L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQNLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD++G      P  I  ++NL+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLAGNQFTSLPKEIGQLQNLRVLNLAG------NQLTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLD------------------------LSDCGLGEGAIPSDIGN 165
                 SL   +G L KL+                        L   G     +P +I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 166 LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           L +L++L+L  N   +LP  I  L NL +L L+D K L++LP+    ++K+ V
Sbjct: 177 LQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNK-LKTLPKEIGQLQKLEV 228



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G +    LP  I  L++L+ LNL G  
Sbjct: 39  LQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ-FTSLPKEIGQLQNLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 97  QLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L  LE L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIGQLQKLEVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L +L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           +L L    +  SLP+    ++ +RV     N   SL   +G L+
Sbjct: 67  RLDLA-GNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQ 109


>gi|418727836|ref|ZP_13286423.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958898|gb|EKO22676.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 241

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M+ L+ L L+   +K +   I  L  L +L L   + L+ LP  I  LK+L+TLNL    
Sbjct: 1   MKNLQALELNNNQLKTLSKEIGQLKNLQRLELNNNQ-LMTLPEEIGQLKNLQTLNLWNN- 58

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+EL ++   +   P+ I  +KNL+ L     N    + S  +   
Sbjct: 59  QLMTLSKEIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELN--NNQLKTLSKEIGQL 116

Query: 121 INLMRRSSDLG----ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK 176
            NL R   DLG     ++   +  L +L  L+L++  L    +  +IG L +L+ LYLS 
Sbjct: 117 KNLQR--LDLGYNQFKIIPNEIEQLQNLQVLELNNNQLT--TLSKEIGRLQNLQELYLSY 172

Query: 177 NNFVTLPASINCLFNLEKLKLEDCK 201
           N F TLP  I  L NL+ L+L + +
Sbjct: 173 NQFTTLPEEIGQLKNLQVLELNNNQ 197


>gi|297805476|ref|XP_002870622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316458|gb|EFH46881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1127

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 56/291 (19%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +KE+P ++   + L +LTL+GC +LV LPS+I +L+ LK L++  C   + +   +  + 
Sbjct: 671 LKEIP-NLSNATNLEELTLEGCGSLVELPSSIKNLQKLKILDVGFCCMLQVIPSNI-NLA 728

Query: 74  SLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYLPFPINLMRRSSD 129
           SL+ L ++G + +R  P    +  N+K L+    +    PPS A C            S 
Sbjct: 729 SLKILTMNGCSRLRTFPE---ISSNIKVLNLGDTDIEDVPPSVAGCL-----------SR 774

Query: 130 LGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCL 189
           L  L + S S L  LT + L                   +  L L+ ++  T+P  +  L
Sbjct: 775 LDRLNICS-SSLKRLTHVPLF------------------ITDLILNGSDIETIPDCVIGL 815

Query: 190 FNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKL 249
             LE L ++ C +L+S+P LPP+++ +  N C SL  +  +     +   ++ F + LKL
Sbjct: 816 TRLEWLSVKRCTKLESIPGLPPSLKVLDANDCVSLKRVRFSF---HTPTNVLQFSNCLKL 872

Query: 250 --LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV 298
               + G+    + ++            + +PG  IP  F ++  G SIT+
Sbjct: 873 DKESRRGIIQKSIYDY------------VCLPGKNIPADFTHKATGRSITI 911


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 11/221 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +E L+ L L +  +  +P+ I  L  L +L L   K L  LP  I  L++L+ L+L    
Sbjct: 116 LENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQELDL-NSN 173

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSF--RGCNGPPSSASCYLP 118
           K   L + +GQ+++L+ L++  T +   P  I  ++NLKTL+         P        
Sbjct: 174 KLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQN 233

Query: 119 FPINLMRRSSDLGALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
             I L+ R + + AL  P   G L +L  LDL    L    +P +IG L +L+ L L +N
Sbjct: 234 LEI-LVLRENRITAL--PKEIGQLQNLQWLDLHQNQLT--TLPKEIGQLQNLQRLDLHQN 288

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
              TLP  I  L NL++L L D  +L +LP+    ++ +RV
Sbjct: 289 QLTTLPKEIGQLQNLQELCL-DENQLTTLPKEIEQLQNLRV 328



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 13/196 (6%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L +L L    +L  LP  I  L++L+ L+L        L + VGQ+E+L+
Sbjct: 63  LPKEIGQLQNLQRLDL-SFNSLTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQ 120

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR--RSSDLGALM 134
            LD+    +   P  I  +KNL+ L         S+    LP  I  +R  +  DL +  
Sbjct: 121 RLDLHQNRLATLPMEIGQLKNLQELDLN------SNKLTTLPKEIRQLRNLQELDLNSNK 174

Query: 135 LPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNL 192
           L +L   +G L  L   +  + +   +P +IG L +LKTL L  N   TLP  I  L NL
Sbjct: 175 LTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNL 234

Query: 193 EKLKLEDCKRLQSLPQ 208
           E L L +  R+ +LP+
Sbjct: 235 EILVLRE-NRITALPK 249



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 17/211 (8%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+EL L    +  +P  +  L  L +L L   + L  LP  I  LK+L+ L+L    K  
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLDLHQNR-LATLPMEIGQLKNLQELDL-NSNKLT 153

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L + + Q+ +L+ELD++   +   P  I  ++NLKTL+         +    LP  I  
Sbjct: 154 TLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNL------IVTQLTTLPKEIGE 207

Query: 124 MRRSSDLGAL--MLPSL-SGLGSLTKLDLSDCGLGEG---AIPSDIGNLHSLKTLYLSKN 177
           ++    L  L   L +L   +G L  L++    L E    A+P +IG L +L+ L L +N
Sbjct: 208 LQNLKTLNLLDNQLTTLPKEIGELQNLEI--LVLRENRITALPKEIGQLQNLQWLDLHQN 265

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
              TLP  I  L NL++L L    +L +LP+
Sbjct: 266 QLTTLPKEIGQLQNLQRLDLHQ-NQLTTLPK 295



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 16/205 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L    +  +P  I  L  L  L L+  + +  LP  I  L++L+ L+L    
Sbjct: 208 LQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR-ITALPKEIGQLQNLQWLDL-HQN 265

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+ LD+    +   P  I  ++NL+ L          +    LP  
Sbjct: 266 QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL------DENQLTTLPKE 319

Query: 121 INLMR--RSSDLGALMLPSLSG----LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++  R  DL    L +L      L SL  L L    L    +P +IG L +L+ L L
Sbjct: 320 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLS--TLPKEIGQLQNLQVLGL 377

Query: 175 SKNNFVTLPASINCLFNLEKLKLED 199
             N   TLP  I  L NL++L L++
Sbjct: 378 ISNQLTTLPKEIGQLQNLQELCLDE 402



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L  L+L +  I  +P  I  L  L  L L   + L  LP  I  L++L+ L+L    
Sbjct: 231 LQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ-LTTLPKEIGQLQNLQRLDL-HQN 288

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+EL +    +   P  I  ++NL+ L            +     P
Sbjct: 289 QLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDL--------DNNQLTTLP 340

Query: 121 INLMRRSS----DLGALMLPSL-SGLGSLTKLDLSDCGLGEG---AIPSDIGNLHSLKTL 172
             ++R  S     LG+  L +L   +G L  L +   GL       +P +IG L +L+ L
Sbjct: 341 KEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQV--LGLISNQLTTLPKEIGQLQNLQEL 398

Query: 173 YLSKNNFVTLPASINCLFNLEKLKL 197
            L +N   T P  I  L NL++L L
Sbjct: 399 CLDENQLTTFPKEIRQLKNLQELHL 423


>gi|238478954|ref|NP_001154443.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196039|gb|AEE34160.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1004

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 37/308 (12%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E L EL++  + ++ +    + L  L ++ LKG  NL  LP N+++   ++ L L  C  
Sbjct: 572 EYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALP-NLSNATKMEILKLSDCKS 630

Query: 62  FENLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCY 116
              +  +   ++ LE+L + G  ++   P+ + L + L  L  RGC    N P  S   Y
Sbjct: 631 LVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNL-EFLYDLDMRGCSRLRNIPVMSTRLY 689

Query: 117 LPFPINLMRRS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGA--IPSDIGNLHSLKTLY 173
               +N+   +  D+ A    S++    +T L ++      G   +P        ++ L 
Sbjct: 690 F---LNISETAVEDVSA----SITSWHHVTHLSINSSAKLRGLTHLP------RPVEFLD 736

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKL 233
           LS +    +P  I   + L+ L +  C+RL SLP+LP +++ +  + C SL T+    K 
Sbjct: 737 LSYSGIERIPNCIKDRYLLKSLTISGCRRLTSLPELPASLKFLVADDCESLETVFCPFK- 795

Query: 234 RKSSC---TIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQ 290
             S C    I +F +  KL  +   AI         +  P    + ++PG E+P  F ++
Sbjct: 796 -TSKCWPFNIFEFTNCFKLDQEARRAI---------IQRPFFHGTTLLPGREVPAEFDHR 845

Query: 291 NEGSSITV 298
             G+++T+
Sbjct: 846 GRGNTLTI 853


>gi|227438217|gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 7/114 (6%)

Query: 2    ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
            E +R++ LD+T I+E+P SIE LS L  L L GCK L  LP  I ++ SL TL L  C  
Sbjct: 2113 ENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTLWLSNCPN 2172

Query: 62   FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPS 111
               L   VG  +++E L + GTAI   P++I     L  L+  GC    N PP+
Sbjct: 2173 I-TLFPEVG--DNIESLALKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPPT 2223



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 30/236 (12%)

Query: 6    ELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
            E L+D TD      S+  L+ L  L L GCK L  LP+NIN L+ L+TL+L GC   E+ 
Sbjct: 2056 ESLVDLTD------SVRHLNNLGVLELSGCKKLKNLPNNIN-LRLLRTLHLEGCSSLEDF 2108

Query: 66   LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
                   E++ ++ +  TAI   P+SI  +  LKTL   GC               NL R
Sbjct: 2109 ---PFLSENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLK-----------NLPR 2154

Query: 126  RSSDLGALMLPSLSGLGSLTKL--------DLSDCGLGEGAIPSDIGNLHSLKTLYLSK- 176
               ++ +L    LS   ++T           L+  G     +P+ IG+   L  L +S  
Sbjct: 2155 TIRNIDSLTTLWLSNCPNITLFPEVGDNIESLALKGTAIEEVPATIGDKSRLCYLNMSGC 2214

Query: 177  NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALK 232
                 LP ++  L NL+ L L  C  +   P+    ++ + +NG + +    G+++
Sbjct: 2215 QRLKNLPPTLKNLTNLKFLLLRGCTNITERPETACRLKALDLNGTSIMEETSGSVQ 2270



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 31/221 (14%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L EL L  + ++ +    + L  L ++ L+GC+ L+ +P N++   SL+ LNL  C    
Sbjct: 2001 LVELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVP-NLSKATSLEKLNLDNCESLV 2059

Query: 64   NLLETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
            +L ++V  + +L  L++SG   ++  P++I L + L+TL   GC     S+    PF   
Sbjct: 2060 DLTDSVRHLNNLGVLELSGCKKLKNLPNNINL-RLLRTLHLEGC-----SSLEDFPFLSE 2113

Query: 123  LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVT 181
             +R                    K+ L +  + E  IP+ I  L  LKTL+LS       
Sbjct: 2114 NVR--------------------KITLDETAIEE--IPASIERLSELKTLHLSGCKKLKN 2151

Query: 182  LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
            LP +I  + +L  L L +C  +   P++  N+E + + G A
Sbjct: 2152 LPRTIRNIDSLTTLWLSNCPNITLFPEVGDNIESLALKGTA 2192



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            +  L L  T I+E+P +I   S L  L + GC+ L  LP  + +L +LK L L GC    
Sbjct: 2183 IESLALKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPPTLKNLTNLKFLLLRGCTNIT 2242

Query: 64   NLLETVGQVESLEELDISGTAI 85
               ET  +   L+ LD++GT+I
Sbjct: 2243 ERPETACR---LKALDLNGTSI 2261


>gi|108946646|gb|ABG23671.1| PopC [Xanthomonas oryzae pv. oryzicola]
          Length = 656

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 37/215 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           LR + +D   + ++P  ++  + L  LTL   +N +R LP++I+SL+ L+ L++L C   
Sbjct: 231 LRHITIDAAGLMKLPADMQKFAALETLTL--ARNPLRSLPASISSLRRLRELSILACPTL 288

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
           + L E++    +         L+ L +  T I   P+SI  ++NLK L  R  N P S+ 
Sbjct: 289 KELPESLAGTNASGEHEGLVNLQRLQLEETGITSLPASIASLQNLKRLQVR--NSPLSAV 346

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
           +                     P++  +  L +LD   C       P   G    LK L 
Sbjct: 347 A---------------------PAIHQMPKLEELDFQGCTALRN-YPPIFGGSAPLKRLN 384

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           L   +N  TLP  I+ L  LE+L L  C  L  LP
Sbjct: 385 LKDCSNLRTLPLDIHNLTQLEELDLRGCDNLSRLP 419



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           L  L  + +   GL +  +P+D+    +L+TL L++N   +LPASI+ L  L +L +  C
Sbjct: 228 LSHLRHITIDAAGLMK--LPADMQKFAALETLTLARNPLRSLPASISSLRRLRELSILAC 285

Query: 201 KRLQSLPQ 208
             L+ LP+
Sbjct: 286 PTLKELPE 293



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKS 50
           L D ++++ +PL I  L+ L +L L+GC NL RLPS+I  L +
Sbjct: 385 LKDCSNLRTLPLDIHNLTQLEELDLRGCDNLSRLPSSIGRLPA 427


>gi|422005762|ref|ZP_16352929.1| molybdate metabolism regulator, partial [Leptospira santarosai
           serovar Shermani str. LT 821]
 gi|417255542|gb|EKT85012.1| molybdate metabolism regulator [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 508

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 32/205 (15%)

Query: 6   ELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL 65
           +L LD    +  P++I   S +  L+L+ C N   +P +I +LK L  LNL      + L
Sbjct: 113 KLNLDAIKFERFPVAITTFSSITYLSLRDC-NFTEIPESIGNLKRLTRLNL-NQNALKTL 170

Query: 66  LETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
             ++G +E L  LDI        P ++  +KNL+ LS R                     
Sbjct: 171 PASIGGLEQLTHLDIDSNQFAIFPDAVLSLKNLEMLSVRSN------------------- 211

Query: 126 RSSDLGALMLPSLS-GLGSLTKLDLSDC-GLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
                    +PSLS G+G+L  L   D  G     +PS I NL  L TLYLS N F   P
Sbjct: 212 --------QIPSLSEGIGTLASLKNFDLQGNQLSFLPSSIENLSLLDTLYLSGNKFSEFP 263

Query: 184 ASINCLFNLEKLKLEDCKRLQSLPQ 208
             +  L NL  L   +   + SLP+
Sbjct: 264 EPVLHLKNLTDLSFNE-NPISSLPE 287


>gi|421126392|ref|ZP_15586625.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410436101|gb|EKP85224.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 267

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 36/233 (15%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           +++ +P  I L   L +L L G + L  LP  I  L++L+ LNL G  +F +L + +GQ+
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQ-LTSLPKEIGQLQNLRVLNLAGN-QFTSLPKEIGQL 62

Query: 73  ESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS--DL 130
           ++LE LD+ G      P  I  ++NL+ L+  G      +    LP  I  ++     DL
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAG------NQLTSLPKEIGQLQNLERLDL 116

Query: 131 GALMLPSL-SGLGSLTKLD------------------------LSDCGLGEGAIPSDIGN 165
                 SL   +G L KL+                        L   G     +P +I  
Sbjct: 117 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL 176

Query: 166 LHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           L +L++L+L  N   +LP  I  L NL +L L+D K L++LP+    ++K+ V
Sbjct: 177 LQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNK-LKTLPKEIGQLQKLEV 228



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 8/218 (3%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR L L       +P  I  L  L +L L G +    LP  I  L++L+ LNL G  
Sbjct: 39  LQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQ-FTSLPKEIGQLQNLRVLNLAGN- 96

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +  +L + +GQ+++LE LD++G      P  I  ++ L+ L+                  
Sbjct: 97  QLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQS 156

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           +  +R S D    +   +  L +L  L L    L   ++P +IG L +L  L L  N   
Sbjct: 157 LKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLT--SLPKEIGQLQNLFELNLQDNKLK 214

Query: 181 TLPASINCLFNLEKLKLE----DCKRLQSLPQLPPNVE 214
           TLP  I  L  LE L+L       K  Q + +L PN E
Sbjct: 215 TLPKEIGQLQKLEVLRLYSNSFSLKEKQKIQELLPNCE 252



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 9/104 (8%)

Query: 135 LPSLSGL-GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLE 193
           LP + GL  +L KL+L    L   ++P +IG L +L+ L L+ N F +LP  I  L NLE
Sbjct: 9   LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLE 66

Query: 194 KLKLEDCKRLQSLPQLPPNVEKVRV-----NGCASLVTLLGALK 232
           +L L D  +  SLP+    ++ +RV     N   SL   +G L+
Sbjct: 67  RLDL-DGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQ 109


>gi|168064075|ref|XP_001783991.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664498|gb|EDQ51216.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 527

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 28/220 (12%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++  +P  +  L+ L  L L GC NL  LP+ + +L SL +L L GC    +L   +G  
Sbjct: 78  NLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLTSLTSLYLSGCLNLTSLPNELGNF 137

Query: 73  ESLEELDISGT-AIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG 131
            SL  L ++    +   P+ +  + +L +L   GC+              NL    ++LG
Sbjct: 138 TSLTSLWLNECFKLTSLPNELGNLTSLTSLYLSGCS--------------NLTSLPNELG 183

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLF 190
            L+        SLT L++ DC     ++P++ GNL SL TL +SK  +   LP  +  L 
Sbjct: 184 NLI--------SLTSLNICDCS-RLTSLPNEFGNLLSLTTLDMSKCQSLAALPNELGNLT 234

Query: 191 NLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
           +L  L L DC +L S P    N+  +    V+ C SL +L
Sbjct: 235 SLTSLNLCDCSKLTSFPNALGNLSSLTTLDVSECQSLESL 274



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 25/197 (12%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           +  +P  +  L+ L  L L GC NL  LP+ +  L SL +LNL GC+K  +L   +G + 
Sbjct: 319 LTSLPNELGNLTSLTSLDLSGCSNLTLLPNELGKLISLTSLNLSGCWKLTSLPNELGNLT 378

Query: 74  SLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA 132
           SL  L++SG   +   P+ +  + +L +L+   C                L    ++LG 
Sbjct: 379 SLTSLNLSGCLNLTSLPNELGNLTSLTSLNLSEC--------------WKLTSLPNELG- 423

Query: 133 LMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFN 191
                   L SLT L+L  C     ++P+++ NL SL +L LS  +N  +LP  +  L +
Sbjct: 424 -------NLTSLTSLNLKRCS-WLTSLPNELDNLTSLTSLDLSGCSNLTSLPNELGNLTS 475

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L  L L +C +L SLP 
Sbjct: 476 LTSLDLSECWKLTSLPN 492



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 25/176 (14%)

Query: 35  CKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTA-IRCPPSSIF 93
           C  L+ LP+ +  L SL +LNL G     +L   +G + SL  L +SG + +   P+ + 
Sbjct: 52  CSKLISLPNELGKLISLTSLNLSGFLNLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELG 111

Query: 94  LMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCG 153
            + +L +L   GC              +NL    ++LG           SLT L L++C 
Sbjct: 112 NLTSLTSLYLSGC--------------LNLTSLPNELG--------NFTSLTSLWLNEC- 148

Query: 154 LGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
               ++P+++GNL SL +LYLS  +N  +LP  +  L +L  L + DC RL SLP 
Sbjct: 149 FKLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLISLTSLNICDCSRLTSLPN 204



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 37/263 (14%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLE 67
           L D + +   P ++  LS L  L +  C++L  LP+ + +L SL +LNL GC+K  + L 
Sbjct: 241 LCDCSKLTSFPNALGNLSSLTTLDVSECQSLESLPNELENLSSLTSLNLSGCWKLTSFLN 300

Query: 68  TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
            +G + SL  L++SG   +   P+ +  + +L +L   GC+              NL   
Sbjct: 301 ELGNLTSLTSLNLSGYWKLTSLPNELGNLTSLTSLDLSGCS--------------NLTLL 346

Query: 127 SSDLGALM---------------LPS-LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLK 170
            ++LG L+               LP+ L  L SLT L+LS C L   ++P+++GNL SL 
Sbjct: 347 PNELGKLISLTSLNLSGCWKLTSLPNELGNLTSLTSLNLSGC-LNLTSLPNELGNLTSLT 405

Query: 171 TLYLSKN-NFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVT 226
           +L LS+     +LP  +  L +L  L L+ C  L SLP    N+  +    ++GC++L +
Sbjct: 406 SLNLSECWKLTSLPNELGNLTSLTSLNLKRCSWLTSLPNELDNLTSLTSLDLSGCSNLTS 465

Query: 227 LLGALKLRKSSCTIIDFVDSLKL 249
           L   L    +S T +D  +  KL
Sbjct: 466 LPNELG-NLTSLTSLDLSECWKL 487



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 25/199 (12%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           +++  +P  +  L+ L  L L GC NL  LP+ + +  SL +L L  CFK  +L   +G 
Sbjct: 101 SNLTSLPNELGNLTSLTSLYLSGCLNLTSLPNELGNFTSLTSLWLNECFKLTSLPNELGN 160

Query: 72  VESLEELDISGTA-IRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL 130
           + SL  L +SG + +   P+ +  + +L +L+   C+   S     LP         ++ 
Sbjct: 161 LTSLTSLYLSGCSNLTSLPNELGNLISLTSLNICDCSRLTS-----LP---------NEF 206

Query: 131 GALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCL 189
           G L+        SLT LD+S C     A+P+++GNL SL +L L   +   + P ++  L
Sbjct: 207 GNLL--------SLTTLDMSKCQ-SLAALPNELGNLTSLTSLNLCDCSKLTSFPNALGNL 257

Query: 190 FNLEKLKLEDCKRLQSLPQ 208
            +L  L + +C+ L+SLP 
Sbjct: 258 SSLTTLDVSECQSLESLPN 276



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 30/224 (13%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D + +  +P     L  L  L +  C++L  LP+ + +L SL +LNL  C K  +    +
Sbjct: 195 DCSRLTSLPNEFGNLLSLTTLDMSKCQSLAALPNELGNLTSLTSLNLCDCSKLTSFPNAL 254

Query: 70  GQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSS 128
           G + SL  LD+S   ++   P+ +  + +L +L+  GC    S                 
Sbjct: 255 GNLSSLTTLDVSECQSLESLPNELENLSSLTSLNLSGCWKLTS----------------- 297

Query: 129 DLGALMLPSLSGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSK-NNFVTLPASI 186
                 L  L  L SLT L+LS  G  +  ++P+++GNL SL +L LS  +N   LP  +
Sbjct: 298 -----FLNELGNLTSLTSLNLS--GYWKLTSLPNELGNLTSLTSLDLSGCSNLTLLPNEL 350

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPN---VEKVRVNGCASLVTL 227
             L +L  L L  C +L SLP    N   +  + ++GC +L +L
Sbjct: 351 GKLISLTSLNLSGCWKLTSLPNELGNLTSLTSLNLSGCLNLTSL 394


>gi|27764544|gb|AAO23074.1| R 10 protein [Glycine max]
          Length = 901

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 13/233 (5%)

Query: 4   LRELLLDKTD-IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LREL  ++ + +  +  SI  L+ L +L+  GC  L   P    +L SL+TL L  C   
Sbjct: 653 LRELSFEECESLVAVDDSIGFLNKLKKLSAYGCSKLKSFPPL--NLTSLQTLELSQCSSL 710

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCN---------GPPSSA 113
           E   E +G++E+++ L + G  I+    S   +  L+ L+ R C            P   
Sbjct: 711 EYFPEIIGEMENIKHLFLYGLPIKELSFSFQNLIGLRWLTLRSCGIVKLPCSLAMMPELF 770

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
             ++ +        S+ G   + S+       +    DC L +    +       +  L 
Sbjct: 771 EFHMEYCNRWQWVESEEGEKKVGSIPS-SKAHRFSAKDCNLCDDFFLTGFKTFARVGHLN 829

Query: 174 LSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVT 226
           LS NNF  LP     L  L  L + DC+ LQ +  LPPN+E      CASL +
Sbjct: 830 LSGNNFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYFDARNCASLTS 882


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 31/209 (14%)

Query: 9   LDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLET 68
           +D T   + PL++ +L+      L G +N   LP  I  LK+L+ L     + F+N L+T
Sbjct: 40  MDLTKALQNPLNVRILN------LSG-QNFTTLPKEIEQLKNLQKL-----YLFDNRLKT 87

Query: 69  ----VGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLM 124
               +GQ+++L+EL++S   +   P  I  ++NL+ L          +    LP  I  +
Sbjct: 88  LPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLY------DNRLTILPIEIGKL 141

Query: 125 RRSSDL-----GALMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNN 178
           +    L         LP  SG LG+L +L+LSD  L    +P +IG L +L+TL L  N 
Sbjct: 142 QNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLT--TLPQEIGQLQNLQTLNLKSNQ 199

Query: 179 FVTLPASINCLFNLEKLKLEDCKRLQSLP 207
             TL   I  L NL+ L L D  +L +LP
Sbjct: 200 LTTLFKEIEQLKNLQTLNLSD-NQLTTLP 227



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 39/206 (18%)

Query: 21  IELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDI 80
           IE L  L  L L   + L  LP  I  L++L TLNL    +   LL  VG++++L  L++
Sbjct: 207 IEQLKNLQTLNLSDNQ-LTTLPIEIGKLQNLHTLNL-SDNQLAILLIEVGKLQNLHTLNL 264

Query: 81  SGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGA-------- 132
           S   +   P  I  ++NL TL+  G      +    LP  I  ++   DL          
Sbjct: 265 SDNQLTTLPIEIGKLQNLHTLNLSG------NQLTTLPIEIGKLQNLQDLNLHSNQLTTL 318

Query: 133 --------------------LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKT 171
                               ++LP   G L +L +L+L +  L   A+P +IG L +L+T
Sbjct: 319 SKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT--ALPIEIGQLQNLQT 376

Query: 172 LYLSKNNFVTLPASINCLFNLEKLKL 197
           L L KN  +T P  I  L NL+ L L
Sbjct: 377 LSLYKNRLMTFPKEIGQLKNLQTLYL 402


>gi|357499611|ref|XP_003620094.1| Disease resistance protein [Medicago truncatula]
 gi|355495109|gb|AES76312.1| Disease resistance protein [Medicago truncatula]
          Length = 901

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 133/319 (41%), Gaps = 57/319 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK-- 61
           +REL LDK         +  L  L   + + CKNL+ +  ++  L  L+ LN +GC K  
Sbjct: 499 MRELNLDKCQYLTRIHDVSNLPNLEIFSFQYCKNLIEIHKSVGFLNKLEILNAMGCSKLL 558

Query: 62  -FENLLETVGQV-------------ESLEELDISG-----TAIRCPPSSIFLMKNLKTLS 102
            F  L+ T  Q              E L E++I+G     T+I   P S   +  L+ LS
Sbjct: 559 SFPPLMSTSLQYLELSYCESRKSFPEILREMNITGLTFLSTSIEKLPVSFQNLTGLRRLS 618

Query: 103 FRGCNGPPSSASCYLPFP-INLMRRSSDLGALMLPSLSGL--GSLTKLDLSDCGLGEGAI 159
             G NG     S     P ++++     +   +   LS +   S   + L +C L +  +
Sbjct: 619 IEG-NGMLRLPSIICSMPNLSVVYVRGCIWPKVDDKLSSMVTSSAEHMHLRNCILSDEFL 677

Query: 160 PSDIGNLHSLKTLYLSKNNFVTLPASI-NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRV 218
           P  +    ++  L LS NNF  LP  I +C F L  L L+DCK L+ +  +PPN++ +  
Sbjct: 678 PIIVMWSANVSKLDLSGNNFTILPECIKDCRF-LTDLILDDCKCLREIRGIPPNLKHLSA 736

Query: 219 NGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGKNGLAISMLREFLEVVSAPSHKFSIVV 278
             C SL++    + L +              L + G  I     F+              
Sbjct: 737 KYCKSLISSARNMLLNQE-------------LHEAGGTIFCFSGFV-------------- 769

Query: 279 PGSEIPKWFMYQNEGSSIT 297
               IP+WF +QN G +I+
Sbjct: 770 ---RIPEWFDHQNMGHTIS 785


>gi|297842711|ref|XP_002889237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297335078|gb|EFH65496.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 753

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 28/173 (16%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           E + +LLL++T I+ +P SIE LS L +L L GCK L+ LP NI +L SL  L L  C  
Sbjct: 489 ETIEKLLLNETTIQYVPPSIERLSRLKELRLSGCKRLMNLPHNIKNLTSLIDLGLANCPN 548

Query: 62  FENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGC----NGPPSSASCYL 117
             +  E VG   +++ L+++ TAI   PS++     L+ L+  GC    N PP+      
Sbjct: 549 VTSFPE-VGT--NIQWLNLNRTAIEAVPSTVGEKSKLRYLNMSGCDKLVNLPPT------ 599

Query: 118 PFPINLMRRSSDLGALML---------PSLSGLGSLTKLDLSDCGLGEGAIPS 161
                 +R+ + L  L L         P L+G  ++  LDL    + +  + S
Sbjct: 600 ------LRKLAQLKYLYLRGCTNVTASPELAGTKTMKALDLHGTSITDQLVDS 646



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 16/195 (8%)

Query: 20  SIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELD 79
           S+  L+ LV L L  CK L  LP+NIN LKSL+ L+L GC   E   E     E++E+L 
Sbjct: 440 SLTQLNKLVHLKLSDCKKLRNLPNNIN-LKSLRFLHLDGCSCLE---EFPFISETIEKLL 495

Query: 80  ISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLS 139
           ++ T I+  P SI  +  LK L   GC    +     LP  I  +    DLG    P+++
Sbjct: 496 LNETTIQYVPPSIERLSRLKELRLSGCKRLMN-----LPHNIKNLTSLIDLGLANCPNVT 550

Query: 140 GL----GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNLEK 194
                  ++  L+L+   +   A+PS +G    L+ L +S  +  V LP ++  L  L+ 
Sbjct: 551 SFPEVGTNIQWLNLNRTAI--EAVPSTVGEKSKLRYLNMSGCDKLVNLPPTLRKLAQLKY 608

Query: 195 LKLEDCKRLQSLPQL 209
           L L  C  + + P+L
Sbjct: 609 LYLRGCTNVTASPEL 623



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 38/228 (16%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           M  L EL L  + I+      + L+ L  L L  CK+L   P +++   +L+TL L  C 
Sbjct: 373 MTSLVELNLSHSSIETAWNGTQDLANLRSLNLTSCKHLTEFP-DLSKATNLETLKLYNC- 430

Query: 61  KFENLLE----TVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASC 115
              NL+E    ++ Q+  L  L +S    +R  P++I    NLK+L F   +G     SC
Sbjct: 431 --NNLVEIPESSLTQLNKLVHLKLSDCKKLRNLPNNI----NLKSLRFLHLDG----CSC 480

Query: 116 YLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLS 175
              FP                 +S   ++ KL L++  +    +P  I  L  LK L LS
Sbjct: 481 LEEFPF----------------ISE--TIEKLLLNETTIQ--YVPPSIERLSRLKELRLS 520

Query: 176 K-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCA 222
                + LP +I  L +L  L L +C  + S P++  N++ + +N  A
Sbjct: 521 GCKRLMNLPHNIKNLTSLIDLGLANCPNVTSFPEVGTNIQWLNLNRTA 568


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 103/208 (49%), Gaps = 31/208 (14%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL--- 66
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL    K+ NLL   
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNL----KW-NLLTVL 86

Query: 67  -ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMR 125
            + + Q+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++
Sbjct: 87  PKEIEQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQ 140

Query: 126 RSSDLGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
              DLG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F
Sbjct: 141 NLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQDNQF 198

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLP 207
            TLP  I  L NL+ L L+D  +L +LP
Sbjct: 199 TTLPKEIGQLQNLQTLNLQD-NQLATLP 225



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 28/195 (14%)

Query: 17  MPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLE 76
           +P  I  L  L  L L G   L  +PS I  LK+L+ LNL    + E L + +GQ+ +L+
Sbjct: 391 LPKEISRLKNLKYLAL-GLNGLKNIPSEIGQLKNLEALNL-EANELERLPKEIGQLRNLQ 448

Query: 77  ELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF-----------PINLMR 125
           +L +    ++  P+ I  +K L+ L          S + +  F            +NL R
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDL--------SVNQFTTFLKEIGKLENLQTLNLQR 500

Query: 126 RS-SDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPA 184
              ++L A     +  L +L +LDL+D       +P +IG L  L+TL L  N   TLP 
Sbjct: 501 NQLTNLTA----EIGQLQNLQELDLNDNQFT--VLPKEIGKLKKLQTLDLRNNQLTTLPT 554

Query: 185 SINCLFNLEKLKLED 199
            I  L NL+ L L++
Sbjct: 555 EIGQLQNLQWLYLQN 569



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 35/229 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQDN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++    +   P  I  ++NL+ L  R      ++     P  
Sbjct: 197 QFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR------NNRLTVFPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLQNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL-PQLPPNVEKVRVNGC 221
             P  I  L NL+ L+       L++ KR+Q L P    ++ +V  NG 
Sbjct: 292 VFPKEIGQLQNLQDLELLMNPFSLKERKRIQKLFPDSNLDLREVAENGV 340



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTVLPKEIEQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 110/284 (38%), Gaps = 57/284 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           ++ L+EL L    +   P  I  L  L Q+       L  LP  +  L++L+TLNL    
Sbjct: 231 LQNLQELYLRNNRLTVFPKEIGQLQNL-QMLCSPENRLTALPKEMGQLQNLQTLNLVNNR 289

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAI----RCPPSSIFLMKNLKTLSFRGCNGPPSS 112
           L  F  E     +GQ+++L++L++         R     +F   NL  L     NG   +
Sbjct: 290 LTVFPKE-----IGQLQNLQDLELLMNPFSLKERKRIQKLFPDSNL-DLREVAENGVYRN 343

Query: 113 ASCYLPFPINLMRRS---SDLGALMLPSLSGLGSLTKLDLSDCGL--------------- 154
            +     P+ +   S    D        +    +L  L+L DCG                
Sbjct: 344 LNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKY 403

Query: 155 ------GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQ 208
                 G   IPS+IG L +L+ L L  N    LP  I  L NL+KL L       +L  
Sbjct: 404 LALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN----TLKI 459

Query: 209 LPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSLKLLGK 252
            P  +E+++              KL+K   ++  F   LK +GK
Sbjct: 460 FPAEIEQLK--------------KLQKLDLSVNQFTTFLKEIGK 489


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L+   + ++P  I  LS L  L L G   L  LP  I++L +L  LNL    + +
Sbjct: 792 LRVLSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNL-SSNQLK 850

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG---CNGPPSSASCYLPFP 120
            L + +G + +L +L++S   ++  P  I  + NL  L   G      PP   +      
Sbjct: 851 VLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLT---N 907

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           + ++  S +    +   +  L +LT+LDLS+    E  +P++IGNL +L+ LYL++    
Sbjct: 908 LEVLYLSRNQLTALPKEIGNLTNLTELDLSE---NENVLPAEIGNLTNLRRLYLNRKQLT 964

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            L   I  L NL+ L L+D +    L  LPP + K+
Sbjct: 965 VLVPEIGNLTNLKTLSLKDNQ----LIALPPEIGKL 996



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 98/241 (40%), Gaps = 42/241 (17%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCK----------------------NLVRL 41
            L +L L    +K +P  I  L+ L QL L   +                       L  L
Sbjct: 839  LTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTEL 898

Query: 42   PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
            P  I +L +L+ L  L   +   L + +G + +L ELD+S       P+ I  + NL+ L
Sbjct: 899  PPEIGNLTNLEVL-YLSRNQLTALPKEIGNLTNLTELDLSENE-NVLPAEIGNLTNLRRL 956

Query: 102  SFRGCNGPPSSASCYLPFPINLMR------RSSDLGALMLPSLSGLGSLTKLDLSDCGLG 155
                        +  +P   NL        + + L AL  P +  L  L  LD++   L 
Sbjct: 957  YLNR-----KQLTVLVPEIGNLTNLKTLSLKDNQLIALP-PEIGKLTQLKWLDINKNQLR 1010

Query: 156  EGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
            +  +P +IGNL +L  LYL  N    LP  I  L NL KL L   K    L  LPP + +
Sbjct: 1011 Q--LPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKNK----LMALPPEMGR 1064

Query: 216  V 216
            +
Sbjct: 1065 L 1065



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 141 LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDC 200
           L + T L+L+   L E  +P +IGNL  L  LYL++N   TLP  I  L NL  L LE+ 
Sbjct: 743 LTNQTSLNLAGKQLTE--LPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLEN- 799

Query: 201 KRLQSLPQLPPNVEKVR 217
            RL  LP+   N+  +R
Sbjct: 800 NRLTKLPKEIGNLSHLR 816



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)

Query: 4    LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
            L  L L +  +  +P  I  L+ L +L L   +N+  LP+ I +L +L+ L  L   +  
Sbjct: 908  LEVLYLSRNQLTALPKEIGNLTNLTELDLSENENV--LPAEIGNLTNLRRL-YLNRKQLT 964

Query: 64   NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNG---PPSSASCYLPFP 120
             L+  +G + +L+ L +    +   P  I  +  LK L          PP   +  L   
Sbjct: 965  VLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGN--LTNL 1022

Query: 121  INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
              L    + L AL    +  L +LTKL L    L   A+P ++G L +L  LYL  N   
Sbjct: 1023 TELYLYDNQLTALP-KEIGNLTNLTKLHLYKNKLM--ALPPEMGRLTNLIELYLDYNQLT 1079

Query: 181  TLPASINCLFNLEKLKLEDCKRLQSLPQL 209
             LP  I  L NL +L   + + +   P++
Sbjct: 1080 ALPPEIGNLTNLTQLSFYNNQLISPSPEI 1108


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L    IK +P  IE L  L  L L   + L  LP  I  L++L++L+L    
Sbjct: 111 LKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQ-LTTLPQEIGQLQNLQSLDL-STN 168

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +G +++L++L +    +   P+ I  +KNL+TL+ R  N   ++ S  +   
Sbjct: 169 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLR--NNRLTTLSKEIEQL 226

Query: 121 INLMRRSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNN 178
            NL  +S DL +  L +    +G L  L + D G  +   +P  IG L +L+TL L  N 
Sbjct: 227 QNL--KSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ 284

Query: 179 FVTLPASINCLFNLEKL 195
             TLP  I  L NL++L
Sbjct: 285 LTTLPQEIGQLQNLQEL 301



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 27/201 (13%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L    IK +P  IE L  L  L L   + L  LP  I  L+ L+ L  L   
Sbjct: 42  LKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQ-LTTLPQEIGQLQKLQWL-YLPKN 99

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L + +GQ+++L+ L++S   I+  P  I  ++ L++L      G  ++    LP  
Sbjct: 100 QLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSL------GLDNNQLTTLP-- 151

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
                   ++G L         +L  LDLS   L    +P +IG+L +L+ LYL  N   
Sbjct: 152 -------QEIGQLQ--------NLQSLDLSTNRLT--TLPQEIGHLQNLQDLYLVSNQLT 194

Query: 181 TLPASINCLFNLEKLKLEDCK 201
            LP  I  L NL+ L L + +
Sbjct: 195 ILPNEIGQLKNLQTLNLRNNR 215



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 39/171 (22%)

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
           L   +F+ L + +GQ+++L +L++S   I+  P  I  ++ L++L        P++    
Sbjct: 27  LSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYL------PNNQLTT 80

Query: 117 LPFPINLMRRSSDLGALMLP---------SLSGLGSLTKLDLS----------------- 150
           LP  I  +++   L  L LP          +  L +L  L+LS                 
Sbjct: 81  LPQEIGQLQK---LQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKL 137

Query: 151 -DCGLGEG---AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
              GL       +P +IG L +L++L LS N   TLP  I  L NL+ L L
Sbjct: 138 QSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYL 188



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 37/141 (26%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
           LD+S    +  P  I  +KNL+ L+         SA+     P   + +   L +L LP+
Sbjct: 25  LDLSANRFKTLPKEIGQLKNLRKLNL--------SANQIKTIPKE-IEKLQKLQSLYLPN 75

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKL-- 195
                 LT             +P +IG L  L+ LYL KN   TLP  I  L NL+ L  
Sbjct: 76  ----NQLT------------TLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNL 119

Query: 196 ----------KLEDCKRLQSL 206
                     K+E  ++LQSL
Sbjct: 120 SYNQIKTIPKKIEKLQKLQSL 140


>gi|218200798|gb|EEC83225.1| hypothetical protein OsI_28511 [Oryza sativa Indica Group]
          Length = 999

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 95/209 (45%), Gaps = 24/209 (11%)

Query: 22  ELLSGLVQL---TLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEEL 78
           E L GL +L    L  C  L  LP NI SL  L+ LNL  CF    L   +G +  L+ L
Sbjct: 512 EALCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYL 571

Query: 79  DISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPS 137
           ++SG   +   P S   +KNL  L   GC+G       +             L  L   +
Sbjct: 572 NLSGCQGLVKLPMSFRNLKNLVHLDLSGCSGVQDFKQVF-----------GGLTKLQYLN 620

Query: 138 LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLK 196
           LS +   T++     G      P  I  L+ L+ L LS+N+ +  LP S+  L  L+ L 
Sbjct: 621 LSKIFGRTRV-----GDNWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLD 675

Query: 197 LEDCKRLQSLP---QLPPNVEKVRVNGCA 222
           L  C+ L+SLP   +L  ++E + V GC+
Sbjct: 676 LSYCRSLRSLPHSIELIDSLEFLIVVGCS 704



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 27/217 (12%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           LR L L    I+ +P SI  L  L  L      + V  P +I  L  LK L+L G F+  
Sbjct: 425 LRVLDLTDCSIRILPSSIGKLKQLRFLIAPNIGDNV-FPKSITLLPKLKYLDLHGSFRIS 483

Query: 64  NLLETVGQVESLEELDISG-TAIRC-PPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPI 121
            L  ++ +   L  LD+SG + IR   P ++  +  L+ L+   C+              
Sbjct: 484 ALQGSISKHACLIHLDLSGCSNIRVIQPEALCGLTKLQFLNLSWCS-------------- 529

Query: 122 NLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFV 180
                   +  ++  +++ L  L  L+LS+C L    +PS IG+L  L+ L LS     V
Sbjct: 530 --------ILQILPENIASLTELQYLNLSNCFL-LSQLPSHIGSLTELQYLNLSGCQGLV 580

Query: 181 TLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            LP S   L NL  L L  C  +Q   Q+   + K++
Sbjct: 581 KLPMSFRNLKNLVHLDLSGCSGVQDFKQVFGGLTKLQ 617



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 40/188 (21%)

Query: 14  IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQVE 73
           + ++P  I  L+ L  L L GC+ LV+LP +  +LK+L  L+L GC   ++  +  G + 
Sbjct: 555 LSQLPSHIGSLTELQYLNLSGCQGLVKLPMSFRNLKNLVHLDLSGCSGVQDFKQVFGGLT 614

Query: 74  SLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLGAL 133
            L+ L++         S IF              G       +  +P             
Sbjct: 615 KLQYLNL---------SKIF--------------GRTRVGDNWDGYP------------- 638

Query: 134 MLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSK-NNFVTLPASINCLFNL 192
              ++S L  L  L+LS     +  +P  +GNL  L+TL LS   +  +LP SI  + +L
Sbjct: 639 --ETISTLNDLEYLNLSRNSRID-YLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELIDSL 695

Query: 193 EKLKLEDC 200
           E L +  C
Sbjct: 696 EFLIVVGC 703



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 17/164 (10%)

Query: 75  LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDL---G 131
           L  LD++  +IR  PSSI  +K L+ L        P+      P  I L+ +   L   G
Sbjct: 425 LRVLDLTDCSIRILPSSIGKLKQLRFLI------APNIGDNVFPKSITLLPKLKYLDLHG 478

Query: 132 ALMLPSLSGLGS----LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV-TLPASI 186
           +  + +L G  S    L  LDLS C       P  +  L  L+ L LS  + +  LP +I
Sbjct: 479 SFRISALQGSISKHACLIHLDLSGCSNIRVIQPEALCGLTKLQFLNLSWCSILQILPENI 538

Query: 187 NCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR---VNGCASLVTL 227
             L  L+ L L +C  L  LP    ++ +++   ++GC  LV L
Sbjct: 539 ASLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNLSGCQGLVKL 582


>gi|27466164|gb|AAN86124.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1055

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 192/475 (40%), Gaps = 91/475 (19%)

Query: 14   IKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENL--LETVGQ 71
            +KE+P ++   + L  L L  CK LV LPS+I++L  LK L + GC   ENL  + T   
Sbjct: 637  LKEIP-NLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGC---ENLRVIPTNIN 692

Query: 72   VESLEELDISG-TAIRCPPSSIFLMKNLKTLSF--RGCNGPPSSASCYLPFPINLMRRSS 128
            + SLE LD+SG + +R  P    +  N+ TL+         P S  C+           S
Sbjct: 693  LASLERLDMSGCSRLRTFPD---ISSNIDTLNLGDTKIEDVPPSVGCW-----------S 738

Query: 129  DLGALMLPSLSGLGSLTKL-DLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASIN 187
             L  L +      G LT+L  +  C                +  L L  ++   +P SI 
Sbjct: 739  RLIQLNI----SCGPLTRLMHVPPC----------------ITILILKGSDIERIPESII 778

Query: 188  CLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCTIIDFVDSL 247
             L  L  L +E C +L+S+  LP +++ +  N C SL  +  +     +   I++F + L
Sbjct: 779  GLTRLHWLIVESCIKLKSILGLPSSLQGLDANDCVSLKRVRFSF---HNPIHILNFNNCL 835

Query: 248  KL--LGKNGLAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITV-TRPSYL 304
            KL    K G+    +  +            I +PG  IP+ F ++  G SIT+   P  L
Sbjct: 836  KLDEEAKRGIIQRSVSGY------------ICLPGKNIPEEFTHKATGRSITIPLAPGTL 883

Query: 305  CNMNQVVGYAACRVFHVPKHSTGIRR-FYRYPHPAHVLHCSMDEKFGHRGSDHLWLLY-- 361
               ++    A+  +  V  +   + R   R      V  C +   F    S+HL++ +  
Sbjct: 884  SASSRF--KASILILPVESYENEVIRCSIRTKGGVEVHCCELPYHFLRFRSEHLYIFHGD 941

Query: 362  -LPRQSYYCNVKWHFESNHFRLSFMDEREKHCPAGSGTGLKVKRCGFHPGYMHEVEEFD- 419
              P+ + Y  V        F  S+           +  G K+  CG     M E  E D 
Sbjct: 942  LFPQGNKYHEVDVTMREITFEFSY-----------TKIGDKIIECGVQ--IMTEGAEGDS 988

Query: 420  --ETTKQWTRFTSYNLNEFHHDFVGSNMAVAKANGSGCCDDYDEEPQPNRFRQLE 472
              E     T  +S  +  F  +F G+N      NG G     + E + ++F Q E
Sbjct: 989  SRELDSFETESSSSQVGNF--EFGGNNNHHTDGNGDG-----NYEAEGSKFSQDE 1036


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 23/204 (11%)

Query: 10  DKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETV 69
           D T   + PL + +L+      L G K L  LP  I  LK+L+ LNL        L + +
Sbjct: 39  DLTKALQNPLDVRVLN------LSGEK-LTALPKEIGQLKNLQELNLKWNL-LTVLPKEI 90

Query: 70  GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSD 129
           GQ+E+L+ELD+    +   P+ I  ++ L++L          +    LP  I  ++   D
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDL------SENRLIILPNEIGRLQNLQD 144

Query: 130 LGA-----LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLP 183
           LG         P   G L +L KL LS+  L   A+P +IG L +L+TL L  N F  LP
Sbjct: 145 LGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT--ALPKEIGQLKNLQTLDLQDNQFTILP 202

Query: 184 ASINCLFNLEKLKLEDCKRLQSLP 207
             I  L NL+ L L D  +L +LP
Sbjct: 203 KEIGQLQNLQTLNLSD-NQLATLP 225



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 35/229 (15%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L++L L K  +   P  I  L  L +L L   + L  LP  I  LK+L+TL+L    
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENR-LTALPKEIGQLKNLQTLDLQDN- 196

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F  L + +GQ+++L+ L++S   +   P  I  ++NL+ L  R      ++     P  
Sbjct: 197 QFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLR------NNRLTVFPKE 250

Query: 121 INLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFV 180
           I  ++   +L  L  P       LT            A+P ++G L +L+TL L  N   
Sbjct: 251 IGQLQ---NLQMLCSPE----NRLT------------ALPKEMGQLQNLQTLNLVNNRLT 291

Query: 181 TLPASINCLFNLEKLK-------LEDCKRLQSL-PQLPPNVEKVRVNGC 221
             P  I  L NL+ L+       L++ KR+Q L P    ++ +V  NG 
Sbjct: 292 VFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGV 340



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 78  LDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRRSSDLG------ 131
           L++SG  +   P  I  +KNL+ L+ +       +    LP  I  +    +L       
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKW------NLLTVLPKEIGQLENLQELDLRDNQL 106

Query: 132 ALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFN 191
           A     +  L  L  LDLS+  L    +P++IG L +L+ L L KN   T P  I  L N
Sbjct: 107 ATFPAVIVELQKLESLDLSENRL--IILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 192 LEKLKLEDCKRLQSLPQ 208
           L+KL L +  RL +LP+
Sbjct: 165 LQKLWLSE-NRLTALPK 180



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 26/156 (16%)

Query: 42  PSNINSLKSLKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTL 101
           P  I   ++L+ LNL  C  F  L + + ++++L+ L +    ++  PS I  +KNL+ L
Sbjct: 369 PKVILKFRNLRGLNLYDC-GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 102 SFRGCNGPPSSASCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPS 161
           +                    L R   ++G L         +L KL L    L     P+
Sbjct: 428 NLEANE---------------LERLPKEIGQLR--------NLQKLSLHQNTLK--IFPA 462

Query: 162 DIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL 197
           +I  L  L+ L LS N F T P  I  L NL+ L L
Sbjct: 463 EIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNL 498



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 97/250 (38%), Gaps = 51/250 (20%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNL---- 56
           ++ L+EL L    +   P  I  L  L Q+       L  LP  +  L++L+TLNL    
Sbjct: 231 LQNLQELYLRNNRLTVFPKEIGQLQNL-QMLCSPENRLTALPKEMGQLQNLQTLNLVNNR 289

Query: 57  LGCFKFENLLETVGQVESLEELDISGTAI----RCPPSSIFLMKNLKTLSFRGCNGPPSS 112
           L  F  E     +GQ+++L++L++    +    R     +F   NL  L     NG   +
Sbjct: 290 LTVFPKE-----IGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL-DLREVAENGVYRN 343

Query: 113 ASCYLPFPINLMRRS---SDLGALMLPSLSGLGSLTKLDLSDCGL--------------- 154
            +     P+ +   S    D        +    +L  L+L DCG                
Sbjct: 344 LNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKY 403

Query: 155 ------GEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKL----------- 197
                 G   IPS+IG L +L+ L L  N    LP  I  L NL+KL L           
Sbjct: 404 LALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE 463

Query: 198 -EDCKRLQSL 206
            E  K+LQ L
Sbjct: 464 IEQLKKLQKL 473


>gi|297818930|ref|XP_002877348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297323186|gb|EFH53607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 982

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 114/249 (45%), Gaps = 54/249 (21%)

Query: 4   LRELLLDK-TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKF 62
           LRE++L + + + E+  SIE +  L +L L GC +LV LPS+I +  +L  L+L+GC   
Sbjct: 600 LREVVLTECSSLVELLFSIENVINLQRLILFGCSSLVMLPSSIENATNLLHLSLVGC--- 656

Query: 63  ENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPIN 122
                      SL EL          P+S+    NLK L    C G        LP+ I 
Sbjct: 657 ----------SSLVEL----------PNSLGNFTNLKNLYLDRCTGLVE-----LPYSIG 691

Query: 123 LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN---NF 179
               +++L  L L   +GL  L               PS IGNLH L  LYL+       
Sbjct: 692 ---NATNLYLLSLDMCTGLVKL---------------PS-IGNLHKL--LYLTLKGCLKL 730

Query: 180 VTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLLGALKLRKSSCT 239
             LP +IN L +LEKL L DC RL+  P++  N++ + + G A     L      +  C 
Sbjct: 731 EVLPININ-LESLEKLDLIDCSRLKLFPEISTNIKYLELKGTAVKEVPLSIKSWSRLDCL 789

Query: 240 IIDFVDSLK 248
            + + ++LK
Sbjct: 790 EMSYSENLK 798


>gi|455790672|gb|EMF42525.1| leucine rich repeat protein [Leptospira interrogans serovar Lora str.
            TE 1992]
          Length = 1618

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ C NL  +P +I +LK L  L+L    +   L 
Sbjct: 1228 LNLSGTKFERFPISVTRFQNLTSLSLRQC-NLSEVPESIGNLKRLIDLHL-NSNQLTTLP 1285

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L +L I        P ++  +KNLKTL  R       +    LP  I  +  
Sbjct: 1286 ASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARW------NQISTLPNEIGNLTS 1339

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSD------------------CGLGEGAI--- 159
              DL       + +  ++  L SLTK+ LS                     +GE  I   
Sbjct: 1340 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK+L + +    +LP SI  L  LE + L   K  + LP    N+E ++
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAK-FRDLPDFLANMESLK 1456



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 16/204 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ++ L +L L+   +  +P S+  L  L QL +        +P  + SLK+LKTL L    
Sbjct: 1268 LKRLIDLHLNSNQLTTLPASLGTLEQLTQLHI-DSNPFTTIPDAVLSLKNLKTL-LARWN 1325

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +   L   +G + SLE+L++    +   P++I   +NL +L+  G +    S     P P
Sbjct: 1326 QISTLPNEIGNLTSLEDLNLHDNQLSSLPTTI---QNLSSLTKIGLSKNKFSE---FPEP 1379

Query: 121  INLMR--RSSDLGA---LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            I  ++  +  D+G      LP   G L +L  LD+ +  +   ++P  I NL  L+T+YL
Sbjct: 1380 ILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETWIE--SLPQSIQNLTQLETIYL 1437

Query: 175  SKNNFVTLPASINCLFNLEKLKLE 198
             K  F  LP  +  + +L+K+K E
Sbjct: 1438 PKAKFRDLPDFLANMESLKKIKFE 1461


>gi|325919350|ref|ZP_08181383.1| Putative Xanthomonas outer protein L [Xanthomonas gardneri ATCC
           19865]
 gi|325550163|gb|EGD20984.1| Putative Xanthomonas outer protein L [Xanthomonas gardneri ATCC
           19865]
          Length = 511

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 51/210 (24%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           L+ L L++  I+ +P SI  LS L QL++  C++L  LP N      L   N  G  ++E
Sbjct: 111 LQTLTLEQNPIRSLPASISHLSQLRQLSIVFCRDLTELPRN------LAIRNASG--QYE 162

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L+       +L+ L + GT IR  P+SI  ++NLK L          S    L   I+ 
Sbjct: 163 GLI-------NLQTLQLLGTGIRVLPTSIMSLENLKRLQVM------HSPLAQLAINIHH 209

Query: 124 MRRSSDL---GALML---PSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
           M R  +L   G+ +    P   G   L +L+L DC                        +
Sbjct: 210 MPRLEELDLQGSALRNYPPVTRGRAPLKRLNLRDC------------------------S 245

Query: 178 NFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
             VTLP  I+ L  LE+L L  C RL++LP
Sbjct: 246 ELVTLPRDIHTLTQLEELDLRGCNRLEALP 275



 Score = 41.6 bits (96), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 127 SSDLGALMLPSLSG----LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTL 182
           S +L +L LP   G    L  L  + +S  GL E  +P  + +  +L+TL L +N   +L
Sbjct: 67  SLNLHSLPLPRFPGQTRRLSHLEHITISAAGLLE--LPQSMQDFANLQTLTLEQNPIRSL 124

Query: 183 PASINCLFNLEKLKLEDCKRLQSLPQ 208
           PASI+ L  L +L +  C+ L  LP+
Sbjct: 125 PASISHLSQLRQLSIVFCRDLTELPR 150


>gi|418518040|ref|ZP_13084194.1| leucin rich protein [Xanthomonas axonopodis pv. malvacearum str.
           GSPB1386]
 gi|410705290|gb|EKQ63766.1| leucin rich protein [Xanthomonas axonopodis pv. malvacearum str.
           GSPB1386]
          Length = 538

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 37/217 (17%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVR-LPSNINSLKSLKTLNLLGCFKF 62
           L+ + +D   + E+P +++  +GL  LTL    N +R LP++I SL  L+ L++  C + 
Sbjct: 138 LQHMTIDAAGLVELPDTMQQFAGLETLTL--AHNPLRALPASIASLSRLRELSIRACPEL 195

Query: 63  ENLLETVGQVES---------LEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSA 113
             L E +    +         L+ L +  T I   P+SI  ++NLK+L  R  N P S+ 
Sbjct: 196 TELPEHLASTNASGEHQGLVNLQSLRLERTGITSLPASIANLQNLKSLKIR--NSPLSA- 252

Query: 114 SCYLPFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLY 173
                           LG    P++  L  L +LDL  C     + P   G    LK L 
Sbjct: 253 ----------------LG----PAIHQLPKLEELDLRGCT-ALRSYPPIFGGSAPLKRLI 291

Query: 174 LSK-NNFVTLPASINCLFNLEKLKLEDCKRLQSLPQL 209
           L   +N +TLP  I+ L  LEKL L  C  L  LP L
Sbjct: 292 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 328


>gi|418701850|ref|ZP_13262768.1| leucine rich repeat protein [Leptospira interrogans serovar Bataviae
            str. L1111]
 gi|410758982|gb|EKR25201.1| leucine rich repeat protein [Leptospira interrogans serovar Bataviae
            str. L1111]
          Length = 1618

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ C NL  +P +I +LK L  L+L    +   L 
Sbjct: 1228 LNLSGTKFERFPISVTRFQNLTSLSLRQC-NLSEVPESIGNLKRLIDLHL-NSNQLTTLP 1285

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L +L I        P ++  +KNLKTL  R       +    LP  I  +  
Sbjct: 1286 ASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARW------NQISTLPNEIGNLTS 1339

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSD------------------CGLGEGAI--- 159
              DL       + +  ++  L SLTK+ LS                     +GE  I   
Sbjct: 1340 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK+L + +    +LP SI  L  LE + L   K  + LP    N+E ++
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAK-FRDLPDFLANMESLK 1456



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 16/204 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ++ L +L L+   +  +P S+  L  L QL +        +P  + SLK+LKTL L    
Sbjct: 1268 LKRLIDLHLNSNQLTTLPASLGTLEQLTQLHI-DSNPFTTIPDAVLSLKNLKTL-LARWN 1325

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +   L   +G + SLE+L++    +   P++I   +NL +L+  G +    S     P P
Sbjct: 1326 QISTLPNEIGNLTSLEDLNLHDNQLSSLPTTI---QNLSSLTKIGLSKNKFSE---FPEP 1379

Query: 121  INLMR--RSSDLGA---LMLP-SLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            I  ++  +  D+G      LP ++  L +L  LD+ +  +   ++P  I NL  L+T+YL
Sbjct: 1380 ILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETWIE--SLPQSIQNLTQLETIYL 1437

Query: 175  SKNNFVTLPASINCLFNLEKLKLE 198
             K  F  LP  +  + +L+K+K E
Sbjct: 1438 PKAKFRDLPDFLANMESLKKIKFE 1461


>gi|242072029|ref|XP_002451291.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
 gi|241937134|gb|EES10279.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
          Length = 816

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 36/255 (14%)

Query: 8   LLDKTDIKEMPLSIELLSGLVQ-LTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
           L + + I  +P SI  LSG ++ L L GC  +  LP++   LK +  L++ GC   + L 
Sbjct: 122 LKESSRISALPESIGKLSGCLEFLGLSGCSGISELPASFGDLKCMMYLDMSGCSAIKELP 181

Query: 67  ETVGQVESLEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCN---GPPSSASCYL----- 117
           ++VG + +L+ L++SG  +++  P S+  +  L+ LS   C      P +  C +     
Sbjct: 182 DSVGHLTNLQRLELSGCNSLKAIPESLCGLTQLQYLSLEFCTYIVRLPEAIGCLVDLQYL 241

Query: 118 --------PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD-----IG 164
                     P++L      +   +  +L GL  L  LD+S  GL  G +  D     + 
Sbjct: 242 NLSHCGVTELPLHLELALCSIKKELPRALRGLTRLEYLDMSWNGLVVGKMEKDDLLDAMK 301

Query: 165 NLHSLKTLYLS---------KNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEK 215
           +L SLK LYLS         K N   L   I  L NLE L L     L+ LP+   N+++
Sbjct: 302 SLTSLKVLYLSGCLKRCFDVKKNDAYLDF-IGTLTNLEHLDLSSNGELEYLPESIGNLKR 360

Query: 216 VR---VNGCASLVTL 227
           +    +  C+ L++L
Sbjct: 361 LHTLNLRNCSGLMSL 375



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 31/216 (14%)

Query: 2   ECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFK 61
           +CLR L        ++P SI  L  L  L     +N V LP  IN L  L+ LNL    +
Sbjct: 69  KCLRILDFSGCSSVQLPASIGKLKQLKYLFAPRMQNDV-LPEYINGLAKLQYLNLKESSR 127

Query: 62  FENLLETVGQVES-LEELDISG-TAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPF 119
              L E++G++   LE L +SG + I   P+S   +K +  L   GC     SA   LP 
Sbjct: 128 ISALPESIGKLSGCLEFLGLSGCSGISELPASFGDLKCMMYLDMSGC-----SAIKELP- 181

Query: 120 PINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNF 179
                            S+  L +L +L+LS C     AIP  +  L  L+ L L    +
Sbjct: 182 ----------------DSVGHLTNLQRLELSGCN-SLKAIPESLCGLTQLQYLSLEFCTY 224

Query: 180 VT-LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVE 214
           +  LP +I CL +L+ L L  C     + +LP ++E
Sbjct: 225 IVRLPEAIGCLVDLQYLNLSHC----GVTELPLHLE 256



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 24/228 (10%)

Query: 12  TDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQ 71
           + IKE+P S+  L+ L +L L GC +L  +P ++  L  L+ L+L  C     L E +G 
Sbjct: 175 SAIKELPDSVGHLTNLQRLELSGCNSLKAIPESLCGLTQLQYLSLEFCTYIVRLPEAIGC 234

Query: 72  VESLEELDISGTAIRCPPSSIFL----MKNLKTLSFRGCNGPPSSASCYLPFPINLMRRS 127
           +  L+ L++S   +   P  + L    +K     + RG          +    +  M + 
Sbjct: 235 LVDLQYLNLSHCGVTELPLHLELALCSIKKELPRALRGLTRLEYLDMSWNGLVVGKMEKD 294

Query: 128 SDLGALMLPSLSGLGSLTKLDLSDC------GLGEGAIPSDIGNLHSLKTLYLSKNNFVT 181
                 +L ++  L SL  L LS C           A    IG L +L+ L LS N  + 
Sbjct: 295 D-----LLDAMKSLTSLKVLYLSGCLKRCFDVKKNDAYLDFIGTLTNLEHLDLSSNGELE 349

Query: 182 -LPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVRVNGCASLVTLL 228
            LP SI  L  L  L L +C  L SLP        V ++G   L +L+
Sbjct: 350 YLPESIGNLKRLHTLNLRNCSGLMSLP--------VSISGATGLKSLV 389



 Score = 38.5 bits (88), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 13/109 (11%)

Query: 144 LTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRL 203
           L  LD S C      +P+ IG L  LK L+  +     LP  IN L  L+ L L++  R+
Sbjct: 71  LRILDFSGCS--SVQLPASIGKLKQLKYLFAPRMQNDVLPEYINGLAKLQYLNLKESSRI 128

Query: 204 QSLPQ----LPPNVEKVRVNGCASLVTL---LGALK----LRKSSCTII 241
            +LP+    L   +E + ++GC+ +  L    G LK    L  S C+ I
Sbjct: 129 SALPESIGKLSGCLEFLGLSGCSGISELPASFGDLKCMMYLDMSGCSAI 177



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%)

Query: 13  DIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLLETVGQV 72
           ++  +P  I  LS L  L L+ C ++  LP  ++ + SLK L++  C   ++L + + Q+
Sbjct: 687 NLGSLPEGIRHLSSLQSLALRSCDSISALPEWLSDISSLKELHICECTSIKSLPQCIQQL 746

Query: 73  ESLEELDISG 82
            +L++L I G
Sbjct: 747 TNLQKLVIYG 756



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 16/167 (9%)

Query: 51  LKTLNLLGCFKFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPP 110
           ++ L+   C K +         + L  LD SG +    P+SI  +K LK L        P
Sbjct: 47  VRALHFSDCNKLDVANGAFSFAKCLRILDFSGCSSVQLPASIGKLKQLKYLF------AP 100

Query: 111 SSASCYLPFPIN--------LMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSD 162
              +  LP  IN         ++ SS + AL        G L  L LS C  G   +P+ 
Sbjct: 101 RMQNDVLPEYINGLAKLQYLNLKESSRISALPESIGKLSGCLEFLGLSGCS-GISELPAS 159

Query: 163 IGNLHSLKTLYLSKNNFVT-LPASINCLFNLEKLKLEDCKRLQSLPQ 208
            G+L  +  L +S  + +  LP S+  L NL++L+L  C  L+++P+
Sbjct: 160 FGDLKCMMYLDMSGCSAIKELPDSVGHLTNLQRLELSGCNSLKAIPE 206


>gi|224165206|ref|XP_002338785.1| predicted protein [Populus trichocarpa]
 gi|222873459|gb|EEF10590.1| predicted protein [Populus trichocarpa]
          Length = 207

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 27/159 (16%)

Query: 255 LAISMLREFLEVVSAPSHKFSIVVPGSEIPKWFMYQNEGSSITVTRPSYLCNMNQVVGYA 314
           + ++ML  +L+ +S P   F IVVPG+EIP WF +Q++GS I+V  PS+       +G+ 
Sbjct: 1   MGLTMLERYLKGLSNPRPGFGIVVPGNEIPGWFNHQSKGSLISVQVPSW------SMGFV 54

Query: 315 ACRVFHVPKHSTGIRRFYR------YPHPAHVLHCSMDEKFGHRGSDHLWLLYLPRQSYY 368
           AC  F     S  +   ++      YP P   + C+  +      SDH+WL YL      
Sbjct: 55  ACVAFSANGESPCLFCDFKANGRENYPSPM-CISCNSIQVL----SDHIWLFYLSFDHLK 109

Query: 369 CNVKWHFES-NHFRLSFMDEREKHCPAGSGTGLKVKRCG 406
              +W  ES ++  LSF    ++         +KVK CG
Sbjct: 110 ELKEWKHESFSNIELSFHSLEQR---------VKVKNCG 139


>gi|418691217|ref|ZP_13252320.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400359621|gb|EJP15606.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 1616

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 36/238 (15%)

Query: 7    LLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFENLL 66
            L L  T  +  P+S+     L  L+L+ C NL  +P +I +LK L  L+L    +   L 
Sbjct: 1226 LNLSGTKFERFPISVTRFQNLTSLSLRQC-NLSEVPESIGNLKRLIDLHL-NSNQLTTLP 1283

Query: 67   ETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINLMRR 126
             ++G +E L +L I        P ++  +KNLKTL  R       +    LP  I  +  
Sbjct: 1284 ASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARW------NQISTLPNEIGNLTS 1337

Query: 127  SSDLG------ALMLPSLSGLGSLTKLDLSD------------------CGLGEGAI--- 159
              DL       + +  ++  L SLTK+ LS                     +GE  I   
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 160  PSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
            P  IGNL +LK+L + +    +LP SI  L  LE + L   K  + LP    N+E ++
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAK-FRDLPDFLANMESLK 1454



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 16/204 (7%)

Query: 1    MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
            ++ L +L L+   +  +P S+  L  L QL +        +P  + SLK+LKTL L    
Sbjct: 1266 LKRLIDLHLNSNQLTTLPASLGTLEQLTQLHI-DSNPFTTIPDAVLSLKNLKTL-LARWN 1323

Query: 61   KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
            +   L   +G + SLE+L++    +   P++I   +NL +L+  G +    S     P P
Sbjct: 1324 QISTLPNEIGNLTSLEDLNLHDNQLSSLPTTI---QNLSSLTKIGLSKNKFSE---FPEP 1377

Query: 121  INLMR--RSSDLGA---LMLPSLSG-LGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
            I  ++  +  D+G      LP   G L +L  LD+ +  +   ++P  I NL  L+T+YL
Sbjct: 1378 ILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETWIE--SLPQSIQNLTQLETIYL 1435

Query: 175  SKNNFVTLPASINCLFNLEKLKLE 198
             K  F  LP  +  + +L+K+K E
Sbjct: 1436 PKAKFRDLPDFLANMESLKKIKFE 1459


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 21/215 (9%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  LR+L L+   +  MP  I  L+ L +L+L G   L  +P+ I  L SL  LNL    
Sbjct: 27  LSALRKLNLEGNQLTSMPAEIGQLTSLTELSL-GENQLRSVPAEIGQLTSLTELNL---- 81

Query: 61  KFENLLETV----GQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCY 116
            F+N L +V    GQ+ SL +LD+    +   P+ ++ + +L+ L         ++    
Sbjct: 82  -FDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILD------NNQLTS 134

Query: 117 LPFPINLMRRSSDLGA--LMLPSL-SGLGSLTKL-DLSDCGLGEGAIPSDIGNLHSLKTL 172
           LP  I  +    +LG   + L SL + +G LT L ++   G    ++P++IG L SL+ L
Sbjct: 135 LPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKL 194

Query: 173 YLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLP 207
           YL  N   ++PA +  L +LE+L L+D  +L +LP
Sbjct: 195 YLYGNQLTSVPAELWQLTSLEELDLKD-NQLTNLP 228



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 10/189 (5%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           +  L  L+LD   +  +P  I  L+ L +L L   + L  LP+ I  L SL+ ++L G  
Sbjct: 119 LTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQ-LTSLPAEIGQLTSLREVHLYGN- 176

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRG---CNGPPSSASCYL 117
           +  +L   +GQ+ SLE+L + G  +   P+ ++ + +L+ L  +     N P        
Sbjct: 177 QLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTS 236

Query: 118 PFPINLMRRSSDLGALMLPSLSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKN 177
            + ++L   S +    +   +  L SLT+L+L+   L   ++P++IG L SLK L L+ N
Sbjct: 237 LWQLHL---SGNQLTSVPAEIGQLASLTELELNGNQLT--SLPAEIGQLTSLKELELNGN 291

Query: 178 NFVTLPASI 186
              +LPA I
Sbjct: 292 QLTSLPAEI 300



 Score = 38.9 bits (89), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 142 GSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCK 201
           G + +L+L   GL  GA+P+++G L +L+ L L  N   ++PA I  L +L +L L +  
Sbjct: 4   GRVVELELEWFGL-IGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGE-N 61

Query: 202 RLQSLP 207
           +L+S+P
Sbjct: 62  QLRSVP 67


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 20/223 (8%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ LR+L L       +P  +E L  L +L+L G   L  LP+ I  LK+L+ L L    
Sbjct: 91  LKNLRKLNLHDNQFTILPKEVEKLENLKELSL-GSNRLTTLPNEIGQLKNLRVLKLTHN- 148

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +F+ + + +GQ+++L+ L++    +   P+ I  ++NLK+L         S+    LP  
Sbjct: 149 QFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDL------GSNRLTTLPNE 202

Query: 121 INLMRRSSDL--GALMLPSL-SGLGSLTKLDLSDCGLGEGAI---PSDIGNLHSLKTLYL 174
           I  +++  DL      L +L + +G L   +L +  LG   +   P++IG L +L+TLYL
Sbjct: 203 IGQLQKLQDLYLSTNRLTTLPNEIGQLQ--NLQELYLGSNQLTILPNEIGQLKNLQTLYL 260

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKVR 217
             N   TL   I  L NL+ L L + +    L   P  +E+++
Sbjct: 261 RSNRLTTLSKDIEQLQNLKSLDLWNNQ----LTTFPKEIEQLK 299



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 12/198 (6%)

Query: 4   LRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCFKFE 63
           +R L L     K +P  I  L  L +L L   + L  LP  I  LK+L+ LNL    +F 
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIGQLKNLRKLNLHDN-QFT 105

Query: 64  NLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFPINL 123
            L + V ++E+L+EL +    +   P+ I  +KNL+ L          +    +P  I  
Sbjct: 106 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKL------THNQFKTIPKEIGQ 159

Query: 124 MR--RSSDLGALMLPSL-SGLGSLTKLDLSDCGLGE-GAIPSDIGNLHSLKTLYLSKNNF 179
           ++  ++ +LG   L +L + +G L  L   D G      +P++IG L  L+ LYLS N  
Sbjct: 160 LKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRL 219

Query: 180 VTLPASINCLFNLEKLKL 197
            TLP  I  L NL++L L
Sbjct: 220 TTLPNEIGQLQNLQELYL 237



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 16/207 (7%)

Query: 1   MECLRELLLDKTDIKEMPLSIELLSGLVQLTLKGCKNLVRLPSNINSLKSLKTLNLLGCF 60
           ++ L+ L L    +  +P  I  L  L  L L G   L  LP+ I  L+ L+ L  L   
Sbjct: 160 LKNLQTLNLGNNQLTALPNEIGQLQNLKSLDL-GSNRLTTLPNEIGQLQKLQDL-YLSTN 217

Query: 61  KFENLLETVGQVESLEELDISGTAIRCPPSSIFLMKNLKTLSFRGCNGPPSSASCYLPFP 120
           +   L   +GQ+++L+EL +    +   P+ I  +KNL+TL  R      S+    L   
Sbjct: 218 RLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLR------SNRLTTLSKD 271

Query: 121 INLMR--RSSDLGALMLPS----LSGLGSLTKLDLSDCGLGEGAIPSDIGNLHSLKTLYL 174
           I  ++  +S DL    L +    +  L +L  LDL    L    +P +IG L +L+   L
Sbjct: 272 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLT--TLPKEIGQLKNLQVFEL 329

Query: 175 SKNNFVTLPASINCLFNLEKLKLEDCK 201
           + N   TLP  I  L NL++L L D +
Sbjct: 330 NNNQLTTLPKEIGQLQNLQELYLIDNQ 356



 Score = 38.5 bits (88), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 158 AIPSDIGNLHSLKTLYLSKNNFVTLPASINCLFNLEKLKLEDCKRLQSLPQLPPNVEKV 216
            +P +IG L +L+ L L+KN    LP  I  L NL KL L D +       LP  VEK+
Sbjct: 60  TLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQ----FTILPKEVEKL 114


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.138    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,636,767,737
Number of Sequences: 23463169
Number of extensions: 326699349
Number of successful extensions: 813647
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 11495
Number of HSP's that attempted gapping in prelim test: 700194
Number of HSP's gapped (non-prelim): 74093
length of query: 472
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 326
effective length of database: 8,933,572,693
effective search space: 2912344697918
effective search space used: 2912344697918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)