BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012031
MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSAPK
SRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAA
VSKFSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIV
LFLVLSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLSNDTTPEE
TREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGG
VSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLF
LELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKK
LIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT

High Scoring Gene Products

Symbol, full name Information P value
AT2G25737 protein from Arabidopsis thaliana 1.6e-102
AT4G21250 protein from Arabidopsis thaliana 6.4e-22
AT1G61740 protein from Arabidopsis thaliana 1.7e-15
AT1G11540 protein from Arabidopsis thaliana 2.2e-15
DDB_G0269644 gene from Dictyostelium discoideum 4.6e-15
AT4G21260 protein from Arabidopsis thaliana 2.3e-11

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012031
        (472 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956017 - symbol:AT2G25737 species:3702 "Ara...  1016  1.6e-102  1
TAIR|locus:2040605 - symbol:AT2G36630 species:3702 "Arabi...   740  2.8e-73   1
TAIR|locus:2127343 - symbol:AT4G21250 "AT4G21250" species...   269  6.4e-22   1
TAIR|locus:2195773 - symbol:AT1G61740 species:3702 "Arabi...   219  1.7e-15   1
TAIR|locus:2200061 - symbol:AT1G11540 "AT1G11540" species...   136  2.2e-15   2
DICTYBASE|DDB_G0269644 - symbol:DDB_G0269644 species:4468...   217  4.6e-15   1
TAIR|locus:2127348 - symbol:AT4G21260 "AT4G21260" species...   124  2.3e-11   3


>TAIR|locus:504956017 [details] [associations]
            symbol:AT2G25737 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002781 Pfam:PF01925
            GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR
            eggNOG:NOG119684 HOGENOM:HOG000238346 EMBL:AY136387 EMBL:BT002106
            EMBL:BT005381 EMBL:AK117723 IPI:IPI00518569 RefSeq:NP_850068.1
            UniGene:At.44601 EnsemblPlants:AT2G25737.1 GeneID:817116
            KEGG:ath:AT2G25737 TAIR:At2g25737 InParanoid:Q8L7A0 OMA:FMIFVSA
            ProtClustDB:CLSN2690916 Genevestigator:Q8L7A0 Uniprot:Q8L7A0
        Length = 476

 Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
 Identities = 213/414 (51%), Positives = 254/414 (61%)

Query:    64 GYKHVWPDIKFGWRIVVGTIIGFFGTACXXXXXXXXXXIFVPMLNLIVGFDXXXXXXXX- 122
             GY+HVWP+ +F W+IV+GT++GFFG A           IFVPML+LI+GFD         
Sbjct:    66 GYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISK 125

Query:   123 ------XXXXXXYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITX 176
                         YNLR RHPTLD+P+IDYDLALL QP+L+LGISIGVAFNVIF DW++T 
Sbjct:   126 CMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTV 185

Query:   177 XXXXXXXXXSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLSNDT 236
                      ST+AFLKG ETW KETI K+EAAK+LE     NG    E +  P   +  T
Sbjct:   186 LLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLE----SNGVSGTEVEYVPLPAAPST 241

Query:   237 TPEETREPKKSKVSIIENIYWKEFGXXXXXXXXXXXXXXXKNYTTTCSVLYWVLNLLQIP 296
              P      KK +VSIIEN+YWKE G               K     CSV YWV+NLLQIP
Sbjct:   242 NPGNK---KKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIP 298

Query:   297 VAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVXXXXXXXXXXXX 356
             VA GVS YEAVALY+GRR IASKG   + +   QLV YC  GI AG+V            
Sbjct:   299 VAVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIM 358

Query:   357 XXXXXXXXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQH 416
                       PQVSSATA FA+TFSSSMSVVEYYLLKRFPVPYALY   ++ IAA+VGQH
Sbjct:   359 GPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQH 418

Query:   417 VLKKLIKILGRAXXXXXXXXXXXXXXALSLGGVGLAKMIKRIEHKEYMGFDNIC 470
             V+++LI  +GRA              A+SLGGVG+  MI +I+  EYMGF+N+C
Sbjct:   419 VVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLC 472


>TAIR|locus:2040605 [details] [associations]
            symbol:AT2G36630 species:3702 "Arabidopsis thaliana"
            [GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002781
            Pfam:PF01925 GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR
            HOGENOM:HOG000238346 EMBL:AY075669 EMBL:AY133633 IPI:IPI00516320
            RefSeq:NP_850267.1 UniGene:At.43254 PRIDE:Q8S9J0
            EnsemblPlants:AT2G36630.1 GeneID:818235 KEGG:ath:AT2G36630
            TAIR:At2g36630 eggNOG:NOG83485 InParanoid:Q8S9J0 OMA:VMMFSSS
            PhylomeDB:Q8S9J0 ProtClustDB:CLSN2680076 Genevestigator:Q8S9J0
            Uniprot:Q8S9J0
        Length = 459

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 164/424 (38%), Positives = 227/424 (53%)

Query:    61 SRSGYKHVWPDIKFGWRIVVGTIIGFFGTACXXXXXXXXXXIFVPMLNLIVGFDXXXXXX 120
             S S  + +WPD+KF W++V+ T+I F G+AC          IFVPML LI+GFD      
Sbjct:    43 SLSATEKIWPDLKFSWKLVLATVIAFLGSACGTVGGVGGGGIFVPMLTLILGFDTKSAAA 102

Query:   121 XX-------XXXXXXYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWM 173
                            YN+R RHPT ++P++DYDLALLFQP+L+LGI++GV+ +V+F  W+
Sbjct:   103 ISKCMIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSLSVVFPYWL 162

Query:   174 ITXXXXXXXXXXSTRAFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECKCDPEYLS 233
             IT          S+R+F KG+E WK+ET+ K E A+Q   +V   G    E   D EY  
Sbjct:   163 ITVLIIILFVGTSSRSFFKGIEMWKEETLLKNEMAQQRANMVNSRG----ELLIDTEY-- 216

Query:   234 NDTTPEETREPKKSKVSIIE-NIYWKEFGXXXXXXXXXXXXXXXKNYTTTCSVLYWVLNL 292
                 P   RE +KS++ II  N+ WK                  KN    CS +YW+L +
Sbjct:   217 ---EPLYPRE-EKSELEIIRSNLKWKGLLILVTVWLTFLLIQIVKNEIKVCSTIYWILFI 272

Query:   293 LQIPVAGGVSAYEAVALYKGRRKIASKGD-----EGT-KWRASQLVFYCACGITAGMVXX 346
             +Q PVA  V  +EA  LY   +K  + G+     E T +W    L+F   CG+  G+V  
Sbjct:   273 VQFPVALAVFGFEASKLYTANKKRLNSGNTECICEATIEWTPLSLIFCGLCGLIGGIVGG 332

Query:   347 XXXXXXXXXXXXXXXXXXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFAL 406
                                 PQV+SATA F + FSSS+SVVE+YLLKRFP+PYA+Y  ++
Sbjct:   333 LLGSGGGFVLGPLLLEIGVIPQVASATATFVMMFSSSLSVVEFYLLKRFPIPYAMYLISV 392

Query:   407 SIIAAFVGQHVLKKLIKILGRAXXXXXXXXXXXXXXALSLGGVGLAKMIKRIEHKEYMGF 466
             SI+A F GQ  ++KL+ IL RA              AL++G +G+ K IK I + E+MGF
Sbjct:   393 SILAGFWGQSFIRKLVAILRRASIIVFVLSGVICASALTMGVIGIEKSIKMIHNHEFMGF 452

Query:   467 DNIC 470
                C
Sbjct:   453 LGFC 456


>TAIR|locus:2127343 [details] [associations]
            symbol:AT4G21250 "AT4G21250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002781 Pfam:PF01925
            GO:GO:0016021 EMBL:CP002687 IPI:IPI00525325 RefSeq:NP_193857.3
            UniGene:At.50360 PRIDE:F4JIP9 EnsemblPlants:AT4G21250.1
            GeneID:827874 KEGG:ath:AT4G21250 OMA:LINYQYL Uniprot:F4JIP9
        Length = 449

 Score = 269 (99.8 bits), Expect = 6.4e-22, P = 6.4e-22
 Identities = 89/366 (24%), Positives = 152/366 (41%)

Query:    71 DIKFGWRIVVGTIIGFFGTACXXXXXXXXXXIFVPMLNLIVGFDXXXXXXXXXXXXXXYN 130
             ++K    I++  ++ F               +F+P++ ++ G D               +
Sbjct:    51 ELKLSSAIIMAGVLCFLAALISSAGGIGGGGLFIPIMTIVAGVDLKTASSFSAFMVTGGS 110

Query:   131 LRQRHPTL--DIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITXXXXXXXXXXSTR 188
             +      L     ++DYDLALL +P ++LG+SIGV  N +  +W+IT          S +
Sbjct:   111 IANVISNLFGGKALLDYDLALLLEPCMLLGVSIGVICNRVLPEWLITVLFAVFLAWSSLK 170

Query:   189 AFLKGVETWKKETITKREAAKQLELIVLGNGYQTEECK-CDPEYLSNDTTPEETREPKKS 247
                 GV+ WK E+   RE+         G G   EE K      L    T  +++ P  +
Sbjct:   171 TCRSGVKFWKLESEIARESGHGRP--ERGQGQIEEETKNLKAPLLEAQATKNKSKIPW-T 227

Query:   248 KVSIIENIYWKEFGXXXXXXXXXXXXXXXKNYTTT--CSVLYWVLNLLQIPVAGGVSAYE 305
             K+ ++  I W  F                K   T   C V YW+L  LQIP+A  +    
Sbjct:   228 KLGVLV-IVWASF----FVIYLLRGNKDGKGIITIKPCGVEYWILLSLQIPLAL-IFTKL 281

Query:   306 AVALYKGRRKIA---SKGDEGTKWRASQLVFYCACGITAGMVXXXXXXXXXXXXXXXXXX 362
             A++  + R++ +    K  EGT+   S  + + A    AG++                  
Sbjct:   282 ALSRTESRQEQSPNDQKNQEGTRLDKSTRLKFPAMSFLAGLLGGIFGIGGGMLISPLLLQ 341

Query:   363 XXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 422
                 PQ+++AT  F + FS++MS V+Y LL       A  F  +  +A+ +G  +++K +
Sbjct:   342 SGIPPQITAATTSFMVFFSATMSAVQYLLLGMQNTDTAYVFSFICFLASLLGLVLVQKAV 401

Query:   423 KILGRA 428
                GRA
Sbjct:   402 AQFGRA 407


>TAIR|locus:2195773 [details] [associations]
            symbol:AT1G61740 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0009963 "positive
            regulation of flavonoid biosynthetic process" evidence=RCA]
            [GO:0010363 "regulation of plant-type hypersensitive response"
            evidence=RCA] InterPro:IPR002781 Pfam:PF01925 GO:GO:0016021
            EMBL:CP002684 EMBL:AC005882 OMA:VICNLVF HOGENOM:HOG000238346
            EMBL:AF325103 EMBL:BT026498 IPI:IPI00542265 PIR:B96643
            RefSeq:NP_176367.1 UniGene:At.23611 IntAct:Q9SYB0 PRIDE:Q9SYB0
            EnsemblPlants:AT1G61740.1 GeneID:842471 KEGG:ath:AT1G61740
            TAIR:At1g61740 InParanoid:Q9SYB0 PhylomeDB:Q9SYB0
            ProtClustDB:CLSN2719057 Genevestigator:Q9SYB0 Uniprot:Q9SYB0
        Length = 458

 Score = 219 (82.2 bits), Expect = 1.7e-15, P = 1.7e-15
 Identities = 88/424 (20%), Positives = 165/424 (38%)

Query:    70 PDIKFGWRIVVGTIIGFFGTACXXXXXXXXXXIFVPMLNLIVGFDXXXXXXXXXXXXXX- 128
             P I+     ++  ++ F  ++           ++VP++ ++ G D               
Sbjct:    51 PRIELTTSTIIAGLLSFLASSISSAGGIGGGGLYVPIMTIVAGLDLKTASSFSAFMVTGG 110

Query:   129 ------YNLRQRHPTLD-IPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITXXXXXX 181
                    NL  R+P      +ID+DLALL +P ++LG+SIGV  N++F +W+IT      
Sbjct:   111 SIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCMLLGVSIGVICNLVFPNWLITSLFAVF 170

Query:   182 XXXXSTRAFLKGVETWKKET-ITKREAAKQLELIVLGNGYQTEECKCDPEYLSNDTTPEE 240
                 + + F  G+  W+ E+ + K   + ++E          EE K +   L      E+
Sbjct:   171 LAWSTLKTFGNGLYYWRLESEMVKIRESNRIE-------EDDEEDKIESLKLP---LLED 220

Query:   241 TREPKKS---KVSIIENIYWKEFGXXXXXXXXXXXXXXXKNYTTTCSVLYWVLNLLQIPV 297
              + PK+    K+ ++  I+   F                      C   YW+++  QIP+
Sbjct:   221 YQRPKRFPWIKLGVLVIIWLSYFAVYLLRGNKYGEGIIS---IEPCGNAYWLISSSQIPL 277

Query:   298 ----------AGGVSAYEAVALYKGRRKIAS-KGDEGTKWRASQLVFYCACGITAGMVXX 346
                       +  V + +    +   + +   + ++G   R+++ +F     + AG++  
Sbjct:   278 TLFFTLWICFSDNVQSQQQSDYHVSVKDVEDLRSNDGA--RSNKCMFP-VMALLAGVLGG 334

Query:   347 XXXXXXXXXXXXXXXXXXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFAL 406
                                 P+V++AT  F + FSS+MS ++Y LL       A  F  +
Sbjct:   335 VFGIGGGMLISPLLLQVGIAPEVTAATCSFMVLFSSTMSAIQYLLLGMEHTGTASIFAVI 394

Query:   407 SIIAAFVGQHVLKKLIKILGRAXXXXXXXXXXXXXXALSLGGVGLAKMIKRIEHKEYMGF 466
               +A+ VG  V++K+I   GRA               + +   G   +        YMGF
Sbjct:   395 CFVASLVGLKVVQKVITEYGRASIIVFSVGIVMALSIVLMTSYGALDVWNDYVSGRYMGF 454

Query:   467 DNIC 470
                C
Sbjct:   455 KLPC 458


>TAIR|locus:2200061 [details] [associations]
            symbol:AT1G11540 "AT1G11540" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0010167 "response to nitrate"
            evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR002781 Pfam:PF01925 GO:GO:0016021 EMBL:CP002684
            UniGene:At.11326 UniGene:At.63949 IPI:IPI00525245
            RefSeq:NP_172621.2 PRIDE:F4I8X6 EnsemblPlants:AT1G11540.1
            GeneID:837697 KEGG:ath:AT1G11540 OMA:WNLESER Uniprot:F4I8X6
        Length = 367

 Score = 136 (52.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
 Identities = 48/193 (24%), Positives = 76/193 (39%)

Query:   283 CSVLYWVLNLLQIPVA--GGVSAYEAVALYKGRRKIASKGDE---GTKWRASQLVFYCAC 337
             C  LYW L+ LQIP+     +  Y +  +       +++  E   G   R ++L+     
Sbjct:   176 CGALYWFLSSLQIPLTIFFTLCIYFSDNVQSNHTSHSNQNSEQETGVGGRQNKLMLP-VM 234

Query:   338 GITAGMVXXXXXXXXXXXXXXXXXXXXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPV 397
              + AG++                      P+V++AT  F + FSSSMS ++Y LL     
Sbjct:   235 ALLAGVLGGLFGIGGGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYLLLGMEHA 294

Query:   398 PYALYFFALSIIAAFVGQHVLKKLIKILGRAXXXXXXXXXXXXXXALSLGGVGLAKMIKR 457
               A  F  +  +A+ VG  V+KK+I   GRA               + +   G   +   
Sbjct:   295 GTAAIFALVCFVASLVGLMVVKKVIAKYGRASIIVFAVGIVMALSTVLMTTHGAFNVWND 354

Query:   458 IEHKEYMGFDNIC 470
                  YMGF   C
Sbjct:   355 FVSGRYMGFKLPC 367

 Score = 128 (50.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
 Identities = 28/73 (38%), Positives = 41/73 (56%)

Query:   130 NLRQRHP-TLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITXXXXXXXXXXSTR 188
             NL  R+P + D  +ID+DLAL  QP L+LG+SIGV  N +F +W++           + +
Sbjct:    31 NLFLRNPKSRDKTLIDFDLALTIQPCLLLGVSIGVICNRMFPNWLVLFLFAVFLAWSTMK 90

Query:   189 AFLKGVETWKKET 201
                KGV  W  E+
Sbjct:    91 TCKKGVSYWNLES 103


>DICTYBASE|DDB_G0269644 [details] [associations]
            symbol:DDB_G0269644 species:44689 "Dictyostelium
            discoideum" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002781
            Pfam:PF01925 dictyBase:DDB_G0269644 GO:GO:0016021 EMBL:AAFI02000005
            RefSeq:XP_646141.1 EnsemblProtists:DDB0190426 GeneID:8617091
            KEGG:ddi:DDB_G0269644 eggNOG:NOG119684 InParanoid:Q55DJ0
            OMA:VICNLVF Uniprot:Q55DJ0
        Length = 549

 Score = 217 (81.4 bits), Expect = 4.6e-15, P = 4.6e-15
 Identities = 83/410 (20%), Positives = 157/410 (38%)

Query:    79 VVGTIIGFFGTACXXXXXXXXXXIFVPMLNLIVGFDXXXXXXXX-------XXXXXXYNL 131
             +VG I+ F G A           I++P+L L+  +D                      N 
Sbjct:   137 IVGFILLFIGCALSSGGGVGGGGIYIPILILVSKWDPKTAIPLSNCLVAGCALANFIQNF 196

Query:   132 RQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITXXXXXXXXXXSTRAFL 191
              +RHP  +  +IDY +ALL +PL + G   GV  +  F   +I           S +   
Sbjct:   197 PRRHPFSNKHLIDYSVALLIEPLTLAGTIFGVYLHTYFPPLVILLLLVITLGFTSYKTIS 256

Query:   192 KGVETWKKETITKREAAKQLE----LIVLGNGYQTEECKCDPEYLSND-TTPEETREPKK 246
             KG++ WK E   K       +         N    +    D E  +N+ +T   +     
Sbjct:   257 KGIDIWKSEKKKKNSLLSNTDDNNNNNNNNNNNNNKNNNNDNENNNNNNSTGGNSNNKNI 316

Query:   247 SKVSIIENIYWKEFGXXXXXXXXXXXXXXXKNYTTT--CSVLYWVLNLLQIPV---AGGV 301
             ++ + IENI +                    +      CS +YW+L+ + +PV   A G+
Sbjct:   317 NETTNIENIKYNLILAFSTMFSIFKGGDQMYSIVGVKLCSPVYWILSFVMVPVIIIAWGI 376

Query:   302 SAYEAVALYKGRRKIASKGDEGT-KWRASQLVFYCACGITAGMVXXXXXXXXXXXXXXXX 360
             +A   +  Y+ ++K   +  EG  K+    ++      + AG +                
Sbjct:   377 TAKFLMREYE-KKKEEGREIEGEIKYTYKNILLLGILSVIAGCLASLLGIGGGMIKGPVL 435

Query:   361 XXXXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKK 420
                   P V++AT+ + I F+S+ S ++Y L+ +    Y + ++ +  ++ F+G   L  
Sbjct:   436 LQMGLVPDVTAATSSYMILFTSASSAIQYILVGKLRWDYGIVYYVIGFVSCFIGTQTLIW 495

Query:   421 LIKILGRAXXXXXXXXXXXXXXALSLGGVGLAKMIKRIEHKEYMGFDNIC 470
             ++K   R                + L    + + I  ++++  + FD+IC
Sbjct:   496 IVKKYQRRSYIVFLIGFVITFSTILLV---ITESIDFVKYRN-LTFDSIC 541


>TAIR|locus:2127348 [details] [associations]
            symbol:AT4G21260 "AT4G21260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002781 Pfam:PF01925
            GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
            EMBL:AL021960 IPI:IPI00520516 PIR:T04957 RefSeq:NP_193858.1
            UniGene:At.54453 EnsemblPlants:AT4G21260.1 GeneID:827875
            KEGG:ath:AT4G21260 TAIR:At4g21260 eggNOG:NOG259940
            HOGENOM:HOG000238346 InParanoid:O49567 PhylomeDB:O49567
            ArrayExpress:O49567 Genevestigator:O49567 Uniprot:O49567
        Length = 393

 Score = 124 (48.7 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query:   142 VIDYDLALLFQPLLVLGISIGVAFNVIFADWMITXXXXXXXXXXSTRAFLKGVETWKKET 201
             +IDYDLALL +P ++LG+S+GV  N +F +W+IT          S      G  +WK   
Sbjct:   112 LIDYDLALLLEPCMLLGVSVGVICNKVFPEWLITGLFVVFLMWSSMETCENGHTSWKLSL 171

Query:   202 ITKRE 206
             I + +
Sbjct:   172 ILREK 176

 Score = 81 (33.6 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query:   367 PQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILG 426
             PQV++AT  F + FS++MS V+Y LL       A  F  +   A+ +G    +K++    
Sbjct:   290 PQVTAATTSFMVFFSATMSGVQYLLLGMQNTEAAYVFSVICFFASTLGLVFAQKVVPHFR 349

Query:   427 RA 428
             RA
Sbjct:   350 RA 351

 Score = 59 (25.8 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
 Identities = 11/16 (68%), Positives = 13/16 (81%)

Query:   283 CSVLYWVLNLLQIPVA 298
             CSV YW+L  LQIP+A
Sbjct:   225 CSVEYWILLSLQIPLA 240

 Score = 47 (21.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query:   387 VEYYLLKRFPVPYALYF--FALSIIAAFVGQHVLKKLIKILG 426
             VEY++L    +P AL F   ALS   +   Q +  +   +LG
Sbjct:   227 VEYWILLSLQIPLALVFTILALSRTESLQEQSISNQEAGLLG 268


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      472       376   0.00088  117 3  11 22  0.48    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  255 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.06u 0.08s 26.14t   Elapsed:  00:00:05
  Total cpu time:  26.06u 0.08s 26.14t   Elapsed:  00:00:05
  Start:  Tue May 21 06:57:58 2013   End:  Tue May 21 06:58:03 2013

Back to top