Query 012031
Match_columns 472
No_of_seqs 297 out of 1982
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 20:15:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012031.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012031hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2h8pc1 f.14.1.1 (C:22-78) Pot 29.9 17 0.0013 24.8 2.9 25 9-33 3-27 (57)
2 d1ymga1 f.19.1.1 (A:6-239) Aqu 18.3 74 0.0054 27.2 5.6 35 388-422 69-103 (234)
3 d1fx8a_ f.19.1.1 (A:) Glycerol 12.9 1.8E+02 0.013 24.8 6.7 35 387-421 68-102 (254)
4 d1rc2a_ f.19.1.1 (A:) Aquapori 11.1 1.4E+02 0.01 25.0 5.3 34 389-422 70-103 (231)
5 d1j4na_ f.19.1.1 (A:) Aquapori 10.7 1.8E+02 0.013 24.7 5.9 35 388-422 84-118 (249)
6 d1cola_ f.1.1.1 (A:) Colicin A 6.2 2.3E+02 0.017 23.6 4.2 23 404-426 174-196 (197)
7 d1ymga1 f.19.1.1 (A:6-239) Aqu 5.6 2E+02 0.015 24.1 3.6 24 143-166 76-99 (234)
8 d2yvxa3 f.57.1.1 (A:276-448) M 5.5 2.7E+02 0.02 22.5 4.2 44 341-391 122-166 (173)
9 d1j4na_ f.19.1.1 (A:) Aquapori 5.3 7.4E+02 0.054 20.2 11.1 24 143-166 91-114 (249)
10 d1r3jc_ f.14.1.1 (C:) Potassiu 5.2 3.4E+02 0.025 19.3 4.4 19 9-27 3-21 (103)
No 1
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=29.85 E-value=17 Score=24.75 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccc
Q 012031 9 FRWRLLAAAFIGLLVVASVSVSAQS 33 (472)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (472)
++||.++...+.++++++..+...-
T Consensus 3 ~~~R~~~~~~~~~~i~i~~~s~~~y 27 (57)
T d2h8pc1 3 LHWRAAGAATVLLVIVLLAGSYLAV 27 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999988777777766665443
No 2
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=18.30 E-value=74 Score=27.16 Aligned_cols=35 Identities=14% Similarity=0.337 Sum_probs=30.1
Q ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 012031 388 EYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 422 (472)
Q Consensus 388 ~~~~~G~i~~~~~l~l~~ga~iGa~iG~~l~~~i~ 422 (472)
.+...|+++|.......+..++|+++|+.+...+.
T Consensus 69 a~~~~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~ 103 (234)
T d1ymga1 69 AFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVT 103 (234)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhccCCChhheeeeeehHHHHHHHHHHHHHHHc
Confidence 35567999999999999999999999998887653
No 3
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}
Probab=12.94 E-value=1.8e+02 Score=24.84 Aligned_cols=35 Identities=17% Similarity=0.328 Sum_probs=29.4
Q ss_pred HHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012031 387 VEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKL 421 (472)
Q Consensus 387 ~~~~~~G~i~~~~~l~l~~ga~iGa~iG~~l~~~i 421 (472)
+.....|++++.......+..++|+++|+.+.+-+
T Consensus 68 la~~i~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~ 102 (254)
T d1fx8a_ 68 IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGL 102 (254)
T ss_dssp HHHHHHSCCCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 33556799999999999999999999999887654
No 4
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=11.08 E-value=1.4e+02 Score=24.99 Aligned_cols=34 Identities=15% Similarity=0.291 Sum_probs=29.5
Q ss_pred HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 012031 389 YYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 422 (472)
Q Consensus 389 ~~~~G~i~~~~~l~l~~ga~iGa~iG~~l~~~i~ 422 (472)
....|++++.......+..++|+.+|+.+.+-+.
T Consensus 70 ~~~~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~i~ 103 (231)
T d1rc2a_ 70 LWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIA 103 (231)
T ss_dssp HHHTTCSCTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3467999999999999999999999998877654
No 5
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=10.73 E-value=1.8e+02 Score=24.69 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=29.7
Q ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 012031 388 EYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 422 (472)
Q Consensus 388 ~~~~~G~i~~~~~l~l~~ga~iGa~iG~~l~~~i~ 422 (472)
.....|++++.......+..++|+.+|+.+.+.+-
T Consensus 84 a~~~~g~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~ 118 (249)
T d1j4na_ 84 GLLLSCQISVLRAIMYIIAQCVGAIVATAILSGIT 118 (249)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhccccchhheeeeeeHHHHHHHHHHhhheeec
Confidence 35567999999999999999999999998876654
No 6
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=6.22 E-value=2.3e+02 Score=23.64 Aligned_cols=23 Identities=9% Similarity=0.192 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHH
Q 012031 404 FALSIIAAFVGQHVLKKLIKILG 426 (472)
Q Consensus 404 ~~ga~iGa~iG~~l~~~i~~~~~ 426 (472)
++.+++|+++...++.++++..+
T Consensus 174 li~~~v~alIdd~~~~~iN~~li 196 (197)
T d1cola_ 174 LLAAVVGALIDDKFADALNNEII 196 (197)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHh
Confidence 45667777777777777766543
No 7
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.58 E-value=2e+02 Score=24.14 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=22.2
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhh
Q 012031 143 IDYDLALLFQPLLVLGISIGVAFN 166 (472)
Q Consensus 143 Id~~l~~~~~~~~llG~~iGa~l~ 166 (472)
++|+......+.-++|+++|+.+.
T Consensus 76 i~~~~~~~Yi~aQ~lGa~~ga~l~ 99 (234)
T d1ymga1 76 MSLLRAICYMVAQLLGAVAGAAVL 99 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhheeeeeehHHHHHHHHHHHH
Confidence 899999999999999999998764
No 8
>d2yvxa3 f.57.1.1 (A:276-448) Mg2+ transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=5.45 E-value=2.7e+02 Score=22.47 Aligned_cols=44 Identities=20% Similarity=0.397 Sum_probs=30.6
Q ss_pred HHHHHhhhcccchhhHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 012031 341 AGMVGGLLGLGGGFILGPLF-LELGIPPQVSSATALFAITFSSSMSVVEYYL 391 (472)
Q Consensus 341 ~G~lsGl~GiGGG~i~vP~l-l~~gl~~~~A~ATs~~~~~~~s~~s~~~~~~ 391 (472)
.-.+++++| ...|++ ..+|.||..+ ++-+....+.+.+...|..
T Consensus 122 ~~~ia~~~G-----~~lPlll~klg~DPA~a--S~P~itti~Di~g~~iyf~ 166 (173)
T d2yvxa3 122 IVFFANLVG-----AMLPFLLRRLGVDPALV--SNPLVATLSDVTGLLIYLS 166 (173)
T ss_dssp HHHHHHHHH-----HHHHHHHHHTSCCGGGS--CSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-----HHHHHHHHHhCCChhhh--hhhHHHHHHHHHHHHHHHH
Confidence 344555555 467887 4799999765 4567777888888887764
No 9
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.27 E-value=7.4e+02 Score=20.23 Aligned_cols=24 Identities=17% Similarity=0.180 Sum_probs=21.8
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhh
Q 012031 143 IDYDLALLFQPLLVLGISIGVAFN 166 (472)
Q Consensus 143 Id~~l~~~~~~~~llG~~iGa~l~ 166 (472)
++|+......+.-++|+.+|+.+.
T Consensus 91 i~~~~~~~Yi~aQ~lGa~~g~~~~ 114 (249)
T d1j4na_ 91 ISVLRAIMYIIAQCVGAIVATAIL 114 (249)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhheeeeeeHHHHHHHHHHhhh
Confidence 899999999999999999998665
No 10
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=5.23 E-value=3.4e+02 Score=19.29 Aligned_cols=19 Identities=32% Similarity=0.527 Sum_probs=11.0
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 012031 9 FRWRLLAAAFIGLLVVASV 27 (472)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (472)
..||......+.+++.++.
T Consensus 3 l~~r~~~~~~~~~~~~~~~ 21 (103)
T d1r3jc_ 3 LHWRAAGAATVLLVIVLLA 21 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4688887655444444433
Done!