Query 012034
Match_columns 472
No_of_seqs 346 out of 2099
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 20:18:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012034.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012034hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g9la_ a.144.1.1 (A:) poly(A) 100.0 1.8E-32 1.3E-36 230.8 9.6 86 371-456 47-132 (144)
2 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 2.3E-30 1.7E-34 234.6 22.5 173 28-214 6-180 (183)
3 d1nmra_ a.144.1.1 (A:) poly(A) 100.0 5E-31 3.7E-35 201.5 3.0 75 376-450 9-83 (85)
4 d1ifwa_ a.144.1.1 (A:) poly(A) 100.0 3.7E-29 2.7E-33 194.3 7.7 80 377-456 7-88 (92)
5 d1i2ta_ a.144.1.1 (A:) hyperpl 99.9 8.8E-29 6.4E-33 177.2 5.8 60 390-449 1-60 (61)
6 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 1.2E-20 8.5E-25 147.4 8.8 79 28-106 2-81 (82)
7 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 3E-20 2.2E-24 145.0 11.1 79 28-106 2-81 (82)
8 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 4.1E-20 3E-24 146.2 10.7 82 26-107 5-87 (88)
9 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 6.8E-20 4.9E-24 144.0 11.5 79 26-104 4-85 (85)
10 d1fxla2 d.58.7.1 (A:119-203) H 99.8 7.5E-20 5.5E-24 143.7 11.2 79 26-104 4-85 (85)
11 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 4.1E-20 3E-24 146.8 9.6 83 26-108 6-89 (90)
12 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 3.7E-20 2.7E-24 143.0 8.7 76 30-105 2-77 (78)
13 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 5E-20 3.6E-24 143.0 9.4 77 30-106 2-79 (80)
14 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 1.1E-20 8.3E-25 149.8 5.8 83 26-108 3-86 (89)
15 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 9.7E-20 7E-24 145.5 10.9 82 26-107 5-87 (93)
16 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 4.8E-20 3.5E-24 147.3 9.0 83 26-108 7-90 (93)
17 d2cpza1 d.58.7.1 (A:383-484) C 99.8 6.4E-20 4.7E-24 149.2 9.4 83 27-109 17-100 (102)
18 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 4.2E-20 3E-24 145.1 7.7 80 29-108 2-82 (85)
19 d2cpha1 d.58.7.1 (A:454-547) P 99.8 8.8E-20 6.4E-24 146.1 9.5 83 26-108 6-91 (94)
20 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 1.5E-19 1.1E-23 147.6 10.0 84 27-110 7-91 (104)
21 d1whwa_ d.58.7.1 (A:) Probable 99.8 1.3E-19 9.2E-24 146.6 8.9 84 25-108 5-89 (99)
22 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 1.3E-19 9.5E-24 143.9 8.6 84 26-109 3-87 (90)
23 d2cqca1 d.58.7.1 (A:109-191) A 99.8 2.4E-19 1.8E-23 140.1 9.8 76 26-101 7-83 (83)
24 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 2.3E-19 1.7E-23 142.3 9.8 81 26-108 6-87 (90)
25 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 5.4E-20 4E-24 145.8 5.9 83 26-109 6-88 (89)
26 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 3.9E-19 2.9E-23 139.1 10.3 78 27-105 5-83 (84)
27 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 1.7E-19 1.2E-23 155.3 8.9 83 26-108 40-123 (139)
28 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 4.5E-19 3.3E-23 141.6 10.7 83 25-108 8-90 (93)
29 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 1.7E-19 1.2E-23 140.3 7.8 79 28-106 1-80 (81)
30 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 4.2E-19 3E-23 144.0 10.1 82 25-106 15-96 (101)
31 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 1.9E-19 1.4E-23 146.6 8.0 82 25-107 7-89 (103)
32 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1.1E-19 7.8E-24 139.9 6.1 75 29-104 1-76 (77)
33 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 2.7E-19 2E-23 136.9 8.2 74 30-104 1-75 (75)
34 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 4.2E-19 3.1E-23 139.3 9.3 77 31-107 1-81 (85)
35 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 6.1E-19 4.4E-23 137.4 9.8 79 131-209 2-81 (82)
36 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 2.2E-19 1.6E-23 145.6 7.0 80 27-107 17-97 (101)
37 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 5.6E-19 4.1E-23 140.2 9.3 82 26-108 6-87 (90)
38 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.8E-19 1.3E-23 140.8 6.0 78 31-108 1-80 (83)
39 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 1.2E-18 8.5E-23 134.4 10.4 76 133-208 2-77 (78)
40 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 1.3E-18 9.4E-23 137.4 10.7 81 130-210 6-87 (88)
41 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 2E-18 1.5E-22 134.4 11.1 78 132-209 3-81 (82)
42 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 1.7E-18 1.2E-22 133.9 10.2 76 28-104 2-78 (79)
43 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 1E-18 7.6E-23 144.9 9.6 79 26-106 5-83 (114)
44 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 1.6E-18 1.2E-22 134.4 9.9 77 133-209 2-79 (80)
45 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 6.1E-19 4.4E-23 143.4 7.6 81 28-109 20-101 (103)
46 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 2.1E-18 1.5E-22 135.3 10.1 78 27-105 5-82 (85)
47 d1fxla2 d.58.7.1 (A:119-203) H 99.7 2.6E-18 1.9E-22 134.7 10.2 79 129-207 4-85 (85)
48 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 9.8E-20 7.1E-24 144.8 1.7 81 26-107 11-91 (91)
49 d2cpza1 d.58.7.1 (A:383-484) C 99.7 9E-19 6.5E-23 142.3 7.4 84 129-212 16-100 (102)
50 d2cqba1 d.58.7.1 (A:1-89) Pept 99.7 2.2E-18 1.6E-22 136.4 9.1 80 131-210 5-85 (89)
51 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 6.9E-19 5E-23 138.4 6.1 80 27-107 3-85 (86)
52 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 3.3E-18 2.4E-22 134.1 10.0 79 129-207 4-85 (85)
53 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.7 4.7E-18 3.4E-22 135.5 11.0 81 130-210 6-87 (93)
54 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.7 2.3E-18 1.7E-22 138.7 9.1 83 26-108 6-95 (98)
55 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 7.6E-19 5.5E-23 134.2 5.5 74 30-104 1-75 (75)
56 d2cq0a1 d.58.7.1 (A:231-320) E 99.7 3.5E-18 2.6E-22 135.5 9.6 81 130-210 7-88 (90)
57 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.7 3.1E-18 2.3E-22 136.6 9.3 82 130-211 8-90 (93)
58 d2msta_ d.58.7.1 (A:) Neural R 99.7 1.7E-18 1.3E-22 132.3 7.2 74 30-104 1-75 (75)
59 d1cvja2 d.58.7.1 (A:91-179) Po 99.7 1.4E-18 1E-22 137.5 6.8 81 131-212 8-88 (89)
60 d2cpha1 d.58.7.1 (A:454-547) P 99.7 4.3E-18 3.1E-22 136.1 9.8 81 130-210 7-90 (94)
61 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.7 4.2E-18 3E-22 136.6 9.5 77 26-107 16-92 (96)
62 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 5.1E-18 3.7E-22 131.7 9.2 78 132-209 2-80 (81)
63 d2cpja1 d.58.7.1 (A:65-150) No 99.7 4.1E-18 3E-22 133.8 8.2 77 27-108 7-83 (86)
64 d2cq3a1 d.58.7.1 (A:110-202) R 99.7 1.3E-17 9.6E-22 132.9 11.3 81 129-210 9-89 (93)
65 d1whwa_ d.58.7.1 (A:) Probable 99.7 9.7E-18 7.1E-22 135.3 10.3 81 131-211 8-89 (99)
66 d2cqca1 d.58.7.1 (A:109-191) A 99.7 1.2E-17 9.1E-22 130.2 10.5 75 130-204 8-83 (83)
67 d2cpea1 d.58.7.1 (A:353-453) R 99.7 5.2E-18 3.8E-22 137.5 8.5 84 25-108 5-97 (101)
68 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.7 2E-18 1.4E-22 133.8 5.2 76 29-109 2-78 (80)
69 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 1.2E-18 8.6E-23 141.6 4.1 84 26-109 16-100 (102)
70 d2u2fa_ d.58.7.1 (A:) Splicing 99.7 6.4E-18 4.7E-22 132.4 8.2 78 133-210 3-81 (85)
71 d1whxa_ d.58.7.1 (A:) Probable 99.7 5.7E-18 4.1E-22 139.6 8.3 77 26-107 8-84 (111)
72 d2cpfa1 d.58.7.1 (A:362-446) P 99.7 9.1E-18 6.7E-22 131.6 8.9 77 134-210 1-81 (85)
73 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 3.8E-18 2.8E-22 131.0 6.6 75 132-207 1-76 (77)
74 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.7 1.1E-17 8.1E-22 133.9 9.5 79 26-106 12-90 (95)
75 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 1.1E-17 8E-22 135.4 9.5 80 132-212 19-99 (101)
76 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 1.9E-17 1.4E-21 131.1 10.6 80 130-211 7-87 (90)
77 d2cqpa1 d.58.7.1 (A:917-1002) 99.7 9.1E-18 6.6E-22 131.9 8.3 79 26-104 7-86 (86)
78 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 1.1E-17 8.2E-22 136.2 9.0 83 132-214 9-92 (104)
79 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 5.9E-18 4.3E-22 135.8 7.1 81 29-109 2-87 (96)
80 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 5.9E-18 4.3E-22 132.0 6.4 78 134-211 1-80 (83)
81 d2ghpa2 d.58.7.1 (A:41-115) U4 99.7 1.7E-17 1.2E-21 126.7 8.8 74 29-104 1-74 (75)
82 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.7 1.5E-17 1.1E-21 128.5 8.4 75 26-107 3-77 (79)
83 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 5.1E-18 3.7E-22 128.7 5.6 70 31-100 1-71 (72)
84 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 6.6E-18 4.8E-22 134.1 6.5 83 27-111 2-88 (91)
85 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.7 4.7E-17 3.4E-21 128.9 11.2 81 130-211 7-87 (90)
86 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.7 1.7E-17 1.2E-21 142.5 9.1 80 131-210 42-122 (139)
87 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 2.1E-17 1.5E-21 129.8 8.8 80 130-210 3-85 (86)
88 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 5E-17 3.6E-21 134.6 11.3 78 131-210 7-84 (114)
89 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 2E-17 1.5E-21 131.0 8.4 81 131-211 5-86 (90)
90 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 3.1E-17 2.3E-21 133.3 9.7 79 131-210 10-89 (103)
91 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.7 3.3E-17 2.4E-21 127.7 9.2 77 26-106 6-83 (83)
92 d2adca2 d.58.7.1 (A:444-531) P 99.7 4.5E-17 3.3E-21 128.4 9.8 78 26-106 8-86 (88)
93 d2cpda1 d.58.7.1 (A:223-308) A 99.7 4.3E-17 3.1E-21 127.9 9.5 78 26-108 6-83 (86)
94 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 8.1E-17 5.9E-21 125.7 10.9 76 132-208 7-83 (84)
95 d2adca1 d.58.7.1 (A:335-443) P 99.7 3.4E-17 2.5E-21 134.5 9.0 76 28-107 2-78 (109)
96 d2cpia1 d.58.7.1 (A:101-189) E 99.7 1.6E-17 1.1E-21 131.3 6.5 76 27-102 7-89 (89)
97 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 4.2E-18 3.1E-22 135.2 3.1 81 129-210 11-91 (91)
98 d1weza_ d.58.7.1 (A:) Heteroge 99.7 3E-17 2.2E-21 133.1 8.1 80 26-107 13-92 (102)
99 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.7 2.8E-17 2.1E-21 133.8 7.8 81 26-108 13-95 (104)
100 d1fjca_ d.58.7.1 (A:) Nucleoli 99.7 1.8E-17 1.3E-21 133.0 6.5 79 26-108 14-92 (96)
101 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 3.8E-17 2.7E-21 124.8 8.0 74 133-207 1-75 (75)
102 d3begb1 d.58.7.1 (B:121-207) S 99.7 2E-17 1.5E-21 130.1 6.5 74 29-108 1-74 (87)
103 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 3.1E-17 2.2E-21 133.2 7.6 80 132-212 21-101 (103)
104 d2adba1 d.58.7.1 (A:177-284) P 99.7 5.7E-17 4.1E-21 132.9 9.2 80 25-107 4-85 (108)
105 d1wf2a_ d.58.7.1 (A:) Heteroge 99.7 3E-17 2.2E-21 132.0 7.1 75 26-107 13-88 (98)
106 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.7 7.9E-17 5.8E-21 129.1 9.5 76 130-210 17-92 (96)
107 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.7 2.4E-17 1.7E-21 133.5 6.4 79 130-208 17-95 (101)
108 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 1.5E-16 1.1E-20 124.5 10.5 77 131-208 6-82 (85)
109 d2cpya1 d.58.7.1 (A:536-638) R 99.7 2.9E-17 2.1E-21 133.5 6.6 83 26-109 6-89 (103)
110 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 2.6E-17 1.9E-21 125.6 5.9 74 133-207 1-75 (75)
111 d1wg1a_ d.58.7.1 (A:) Probable 99.7 3.7E-17 2.7E-21 128.8 6.8 77 26-108 3-79 (88)
112 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 1.9E-16 1.4E-20 122.0 10.3 75 132-207 3-78 (79)
113 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 2.1E-16 1.5E-20 141.6 12.0 107 3-110 72-179 (183)
114 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.7 1.9E-16 1.4E-20 127.3 10.2 82 130-211 7-95 (98)
115 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.7 2.1E-16 1.5E-20 126.4 10.2 79 129-209 12-90 (95)
116 d2msta_ d.58.7.1 (A:) Neural R 99.7 1E-16 7.4E-21 122.3 7.9 74 133-207 1-75 (75)
117 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 1.4E-16 1E-20 121.5 8.7 72 31-108 1-72 (75)
118 d1wg5a_ d.58.7.1 (A:) Heteroge 99.6 1.3E-16 9.7E-21 129.7 8.8 81 26-107 13-94 (104)
119 d2cpja1 d.58.7.1 (A:65-150) No 99.6 1.2E-16 8.4E-21 125.4 7.8 75 131-210 8-82 (86)
120 d1whya_ d.58.7.1 (A:) Putative 99.6 1.9E-16 1.4E-20 127.1 9.2 77 26-107 15-93 (97)
121 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.6 2.7E-17 2E-21 129.7 4.0 77 26-108 3-79 (88)
122 d2cpea1 d.58.7.1 (A:353-453) R 99.6 1.9E-16 1.4E-20 128.0 9.2 82 129-210 6-96 (101)
123 d1wg4a_ d.58.7.1 (A:) Splicing 99.6 1.2E-16 8.8E-21 128.4 7.8 77 26-108 13-89 (98)
124 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.6 1.5E-16 1.1E-20 122.6 8.0 74 130-210 4-77 (79)
125 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 3.4E-16 2.5E-20 121.9 9.4 77 129-209 6-83 (83)
126 d2cqpa1 d.58.7.1 (A:917-1002) 99.6 2.1E-16 1.5E-20 123.9 8.3 78 130-207 8-86 (86)
127 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.6 6E-17 4.3E-21 125.3 4.7 74 133-211 3-77 (80)
128 d1nu4a_ d.58.7.1 (A:) Spliceso 99.6 1.2E-16 8.4E-21 126.8 6.5 83 131-215 3-89 (91)
129 d2cpia1 d.58.7.1 (A:101-189) E 99.6 2.9E-16 2.1E-20 123.9 8.7 76 130-205 7-89 (89)
130 d1whxa_ d.58.7.1 (A:) Probable 99.6 2.4E-16 1.7E-20 129.7 8.2 76 130-210 9-84 (111)
131 d2cpxa1 d.58.7.1 (A:291-392) R 99.6 3.3E-17 2.4E-21 132.9 2.4 83 130-212 17-100 (102)
132 d2cq1a1 d.58.7.1 (A:51-138) Po 99.6 4.4E-16 3.2E-20 122.6 8.9 79 25-108 5-85 (88)
133 d1wela1 d.58.7.1 (A:412-523) R 99.6 2.7E-16 2E-20 129.6 7.9 84 25-109 15-99 (112)
134 d2adca1 d.58.7.1 (A:335-443) P 99.6 3.3E-16 2.4E-20 128.5 8.2 74 131-208 2-76 (109)
135 d2disa1 d.58.7.1 (A:8-103) Hyp 99.6 4.1E-16 3E-20 124.9 8.2 80 132-211 2-86 (96)
136 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.6 2.9E-16 2.1E-20 126.5 7.1 78 26-108 16-96 (99)
137 d2ghpa2 d.58.7.1 (A:41-115) U4 99.6 1.2E-15 8.5E-20 116.3 9.9 74 132-207 1-74 (75)
138 d1wf2a_ d.58.7.1 (A:) Heteroge 99.6 5.4E-16 3.9E-20 124.6 8.2 73 130-209 14-87 (98)
139 d2cpya1 d.58.7.1 (A:536-638) R 99.6 6.9E-16 5E-20 125.2 8.9 83 131-214 8-91 (103)
140 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.6 1.8E-16 1.3E-20 119.9 5.0 70 134-203 1-71 (72)
141 d1wexa_ d.58.7.1 (A:) Heteroge 99.6 1.2E-15 8.9E-20 123.9 10.0 77 26-107 13-91 (104)
142 d2cpda1 d.58.7.1 (A:223-308) A 99.6 1.3E-15 9.7E-20 119.2 9.6 75 131-210 8-82 (86)
143 d2adca2 d.58.7.1 (A:444-531) P 99.6 1.1E-15 7.9E-20 120.3 9.1 77 130-209 9-86 (88)
144 d1wg1a_ d.58.7.1 (A:) Probable 99.6 1.1E-15 7.7E-20 120.3 8.3 74 131-210 5-78 (88)
145 d1jmta_ d.58.7.3 (A:) d1g9la_ a.144.1.1 (A:) poly(A) binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=1.8e-32 Score=230.78 Aligned_cols=86 Identities=42% Similarity=0.699 Sum_probs=80.7
Q ss_pred CCCccccchhhhhcCCHHHHHHHhhhhhhhhHhhcCCccchhhhHhhcCCChHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 012034 371 QPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA 450 (472)
Q Consensus 371 ~~~~~~~~~~~la~~~~~~q~~~~g~~l~~~v~~~~~~~a~kitgmll~~~~~e~~~~~~~~~~l~~~v~~a~~~l~~~~ 450 (472)
.+.+.++++++||++++++||++|||+|||+|++++|++|+||||||||||++|||+||+|+++|++||+||++||++|+
T Consensus 47 ~~~q~pltas~la~a~p~eQkq~LGE~Lyp~I~~~~p~~A~KITGMLLEmd~~ell~lL~~~~~L~~kV~EA~~vL~~~~ 126 (144)
T d1g9la_ 47 VQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQ 126 (144)
T ss_dssp CCSCCCCSHHHHTTCTTTTTTTTTTSSSHHHHHHHTTSCCSSHHHHTTTSSSHHHHHHHHCTTHHHHHHHHHHHHHHTTS
T ss_pred CCCCCcccHHHHhhCCHHHHHHHHHHHHHHHHHHhChhhccchhhhhhcCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHh
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCC
Q 012034 451 QQQANN 456 (472)
Q Consensus 451 ~~~~~~ 456 (472)
.+++.+
T Consensus 127 ~~~~~~ 132 (144)
T d1g9la_ 127 AKEAAQ 132 (144)
T ss_dssp SSTTCC
T ss_pred ccHHHH
Confidence 877554
No 2
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=2.3e-30 Score=234.62 Aligned_cols=173 Identities=25% Similarity=0.462 Sum_probs=150.9
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
.++|||+|||+++|+++|+++|++||.|.++.++.+ .++.++|||||+|.+.++|.+|++. ++..+.++.+.+.+...
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~~~~~~~~~~ 84 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVS 84 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcccccchhhhhhhh
Confidence 478999999999999999999999999999999998 5899999999999999999999974 67778888888877654
Q ss_pred chhHHHHHHHHHHhhhhhhccccccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHH
Q 012034 107 KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEA 185 (472)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A 185 (472)
+.... .........+|||+|||..+|+++|+++|+.||.|..+.|..+. +|.++|||||+|.+.++|
T Consensus 85 ~~~~~------------~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A 152 (183)
T d1u1qa_ 85 REDSQ------------RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 152 (183)
T ss_dssp TTGGG------------STTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHH
T ss_pred ccccc------------ccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHH
Confidence 43211 11122344689999999999999999999999999999999875 588999999999999999
Q ss_pred HHHHHHhCCcEecCeeEEEEEcccHHHHH
Q 012034 186 SRALAEMNGKMIVSKPLYVAVAQRKEERR 214 (472)
Q Consensus 186 ~~Ai~~l~g~~i~gk~l~V~~a~~k~~~~ 214 (472)
.+|++ +++..++|+.|.|.+|..|+++.
T Consensus 153 ~~Al~-~~~~~~~G~~i~V~~A~~k~e~~ 180 (183)
T d1u1qa_ 153 DKIVI-QKYHTVNGHNCEVRKALSKQEMA 180 (183)
T ss_dssp HHHHT-SSCEEETTEEEEEEECCCHHHHH
T ss_pred HHHHH-hCCCeECCEEEEEEecCCccccc
Confidence 99996 78899999999999999887664
No 3
>d1nmra_ a.144.1.1 (A:) poly(A) binding protein {Protozoan (Trypanosoma cruzi) [TaxId: 5693]}
Probab=99.96 E-value=5e-31 Score=201.48 Aligned_cols=75 Identities=56% Similarity=0.776 Sum_probs=72.6
Q ss_pred ccchhhhhcCCHHHHHHHhhhhhhhhHhhcCCccchhhhHhhcCCChHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 012034 376 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA 450 (472)
Q Consensus 376 ~~~~~~la~~~~~~q~~~~g~~l~~~v~~~~~~~a~kitgmll~~~~~e~~~~~~~~~~l~~~v~~a~~~l~~~~ 450 (472)
..++++|++++|++||++|||+|||+|++++|++|+||||||||||++||++||+|++.|++||+||++||++|+
T Consensus 9 ~~~a~~la~~~p~eqK~~LGE~Lyp~V~~~~p~~AgKITGMLLEm~~~ell~lL~~~~~L~~kV~EA~~vL~~h~ 83 (85)
T d1nmra_ 9 QNLSTVLANLTPEQQKNVLGERLYNHIVAINPAAAAKVTGMLLEMDNGEILNLLDTPGLLDAKVQEALEVLNRHM 83 (85)
T ss_dssp CTTHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHCSCTHHHHHHTTCCTHHHHHHHHHHHHHHTTCCC
T ss_pred hHHHHHHhhCCHHHHHHHHHHHHHHHHHHHCcccccchhHHhhCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHhc
Confidence 358999999999999999999999999999999999999999999999999999999999999999999999875
No 4
>d1ifwa_ a.144.1.1 (A:) poly(A) binding protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=3.7e-29 Score=194.28 Aligned_cols=80 Identities=33% Similarity=0.439 Sum_probs=74.5
Q ss_pred cchhhhhcCCHHHHHHHhhhhhhhhHhhc--CCccchhhhHhhcCCChHHHHHhhCChHHHHHHHHHHHHHHHHHHHhhc
Q 012034 377 ALSTALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA 454 (472)
Q Consensus 377 ~~~~~la~~~~~~q~~~~g~~l~~~v~~~--~~~~a~kitgmll~~~~~e~~~~~~~~~~l~~~v~~a~~~l~~~~~~~~ 454 (472)
.+++.++.+++++||++|||+|||+|+++ +|++|+||||||||||++||++||+|++.|++||+||++||++|+++++
T Consensus 7 ~~~~~~~~~~~~~qk~~LGe~Lyp~V~~~~~~pe~A~KITGMLLEm~~~ell~lL~~~~~L~~kV~EA~~vL~~~~~~~~ 86 (92)
T d1ifwa_ 7 RNANDNNQFYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESDELFEQHYKEASAAYESFKKEQE 86 (92)
T ss_dssp SCCSSCCSCSCHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHTTSCHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CChHHHhhcCHHHHHHHHHHHHHHHHHHhccCccccccchhhhcCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhccc
Confidence 46777888999999999999999999998 5899999999999999999999999999999999999999999998765
Q ss_pred CC
Q 012034 455 NN 456 (472)
Q Consensus 455 ~~ 456 (472)
+.
T Consensus 87 ~~ 88 (92)
T d1ifwa_ 87 QQ 88 (92)
T ss_dssp TS
T ss_pred cc
Confidence 53
No 5
>d1i2ta_ a.144.1.1 (A:) hyperplastic discs protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=8.8e-29 Score=177.15 Aligned_cols=60 Identities=45% Similarity=0.720 Sum_probs=59.2
Q ss_pred HHHHhhhhhhhhHhhcCCccchhhhHhhcCCChHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 012034 390 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 449 (472)
Q Consensus 390 q~~~~g~~l~~~v~~~~~~~a~kitgmll~~~~~e~~~~~~~~~~l~~~v~~a~~~l~~~ 449 (472)
||++|||+|||+|++++|++|+||||||||||++||++||+|++.|++||+||++||++|
T Consensus 1 qk~~LGE~Ly~~V~~~~p~~A~KITGMLLEm~~~ell~lL~~~~~L~~kV~EA~~vL~~h 60 (61)
T d1i2ta_ 1 HRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAH 60 (61)
T ss_dssp CHHHHHHHHHHHHHHHCGGGHHHHHHHHTTSCHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHhHHHHHHHChhhhcchhHHHhcCCHHHHHHHHCCHHHHHHHHHHHHHHHHHc
Confidence 799999999999999999999999999999999999999999999999999999999987
No 6
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.82 E-value=1.2e-20 Score=147.37 Aligned_cols=79 Identities=30% Similarity=0.503 Sum_probs=75.5
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
.++|||+|||.++|+++|+++|++||.|.++.+.+| .+|+++|||||+|++.++|++|++.|||..+.|+.|.|.+|++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 578999999999999999999999999999999987 5799999999999999999999999999999999999999864
No 7
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3e-20 Score=144.96 Aligned_cols=79 Identities=34% Similarity=0.585 Sum_probs=75.3
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
.++|||+|||.++|+++|+++|++||.|.++.+++| .+|+++|||||+|.+.++|.+|++.|||..|.|+.|.|.+|++
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 468999999999999999999999999999999998 5789999999999999999999999999999999999999864
No 8
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.81 E-value=4.1e-20 Score=146.16 Aligned_cols=82 Identities=27% Similarity=0.382 Sum_probs=77.0
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||.++|+++|+++|++||+|.+|.+++| .+|+++|||||+|++.++|++|++.|||..+.|+.|.|.||
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a 84 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC 84 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 45678999999999999999999999999999999998 57999999999999999999999999999999999999999
Q ss_pred ccc
Q 012034 105 QKK 107 (472)
Q Consensus 105 ~~~ 107 (472)
..+
T Consensus 85 ~~k 87 (88)
T d1rk8a_ 85 FVK 87 (88)
T ss_dssp EEC
T ss_pred cCC
Confidence 764
No 9
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.81 E-value=6.8e-20 Score=143.96 Aligned_cols=79 Identities=33% Similarity=0.562 Sum_probs=74.4
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCC--cceeee
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDD--REWYVG 102 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g--~~l~V~ 102 (472)
.+.++|||+|||+++|+++|+++|++||.|.++++++| .+|++||||||+|.+.++|.+|++.||+..+.| +.|.|.
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 46788999999999999999999999999999999998 579999999999999999999999999999987 789999
Q ss_pred cc
Q 012034 103 KA 104 (472)
Q Consensus 103 ~a 104 (472)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 10
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.5e-20 Score=143.68 Aligned_cols=79 Identities=29% Similarity=0.523 Sum_probs=73.6
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCc--ceeee
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR--EWYVG 102 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~--~l~V~ 102 (472)
.+.++|||+|||.++|+++|+++|++||+|.++.++.| .+|+++|||||+|.++++|.+|++.|||..+.|+ +|.|.
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 45688999999999999999999999999999999998 4799999999999999999999999999999984 58888
Q ss_pred cc
Q 012034 103 KA 104 (472)
Q Consensus 103 ~a 104 (472)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 76
No 11
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=4.1e-20 Score=146.82 Aligned_cols=83 Identities=30% Similarity=0.531 Sum_probs=78.3
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||.++|+++|+++|++||.|.++.+..| .+|++||||||+|.+.++|.+|++.|||..++|+.|.|.||
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 45688999999999999999999999999999999998 47999999999999999999999999999999999999999
Q ss_pred ccch
Q 012034 105 QKKS 108 (472)
Q Consensus 105 ~~~~ 108 (472)
.+++
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 8654
No 12
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=3.7e-20 Score=142.98 Aligned_cols=76 Identities=34% Similarity=0.521 Sum_probs=74.0
Q ss_pred eEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 30 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 30 ~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
+|||+|||+++|+++|+++|++||.|.++.+..|.+|+++|||||+|.+.++|.+|++.|||..+.|+.|.|.++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999875
No 13
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=5e-20 Score=142.99 Aligned_cols=77 Identities=26% Similarity=0.380 Sum_probs=73.9
Q ss_pred eEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 30 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 30 ~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
+|||+|||.++|+++|+++|++||+|.+++|++| .+|+++|||||+|.+.++|.+|++.|||..+.|+.|.|.+++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 5999999999999999999999999999999998 4699999999999999999999999999999999999999864
No 14
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.1e-20 Score=149.79 Aligned_cols=83 Identities=31% Similarity=0.399 Sum_probs=77.7
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECC-CCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~-~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||+++|+++|+++|++||+|.+|.+++|. +|+++|||||+|.+.++|.+|++.||+..|+|+.|.|.+|
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 456789999999999999999999999999999999984 6999999999999999999999999999999999999999
Q ss_pred ccch
Q 012034 105 QKKS 108 (472)
Q Consensus 105 ~~~~ 108 (472)
.++.
T Consensus 83 ~p~~ 86 (89)
T d2cqba1 83 KPMR 86 (89)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7643
No 15
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=9.7e-20 Score=145.54 Aligned_cols=82 Identities=27% Similarity=0.354 Sum_probs=77.3
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
+..++|||+|||.++|+++|+++|++||+|.+|.++.| .+|+++|||||+|.+.++|..|++.||+..++|+.|.|.|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 46789999999999999999999999999999999998 57899999999999999999999999999999999999998
Q ss_pred ccc
Q 012034 105 QKK 107 (472)
Q Consensus 105 ~~~ 107 (472)
...
T Consensus 85 ~~~ 87 (93)
T d1h2vz_ 85 AGF 87 (93)
T ss_dssp SCC
T ss_pred CCC
Confidence 643
No 16
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=4.8e-20 Score=147.32 Aligned_cols=83 Identities=25% Similarity=0.404 Sum_probs=77.9
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||.++|+++|+++|++||.|.++.|++| .+|+++|||||+|.+.++|.+|++.||+..|.|+.|.|.+|
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 34678999999999999999999999999999999998 57999999999999999999999999999999999999999
Q ss_pred ccch
Q 012034 105 QKKS 108 (472)
Q Consensus 105 ~~~~ 108 (472)
..+.
T Consensus 87 ~~~~ 90 (93)
T d1x5ua1 87 SAHN 90 (93)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 7654
No 17
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=6.4e-20 Score=149.20 Aligned_cols=83 Identities=31% Similarity=0.542 Sum_probs=78.3
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
..++|||+|||+++|+++|+++|++||.|.++.++.+ .+|++||||||+|.+.++|.+|++.|||..|.|+.|+|.++.
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 4578999999999999999999999999999999998 579999999999999999999999999999999999999998
Q ss_pred cchh
Q 012034 106 KKSE 109 (472)
Q Consensus 106 ~~~~ 109 (472)
++.+
T Consensus 97 ~k~~ 100 (102)
T d2cpza1 97 SKND 100 (102)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 7754
No 18
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.2e-20 Score=145.13 Aligned_cols=80 Identities=21% Similarity=0.498 Sum_probs=75.8
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccccc
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 107 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~~ 107 (472)
.+|||+|||+++|+++|+++|++||+|.++.|++| .+|+++|||||+|.++++|..|++.||+..|.|+.|.|.+|...
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 46999999999999999999999999999999998 57999999999999999999999999999999999999999764
Q ss_pred h
Q 012034 108 S 108 (472)
Q Consensus 108 ~ 108 (472)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 3
No 19
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=8.8e-20 Score=146.08 Aligned_cols=83 Identities=23% Similarity=0.491 Sum_probs=77.4
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC--CCCCceeEEEEEeCCHHHHHHHHHHH-CCCccCCcceeee
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD--GDGKSKCFGFVNFENADDAAKAVEAL-NGKKFDDREWYVG 102 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d--~~g~skG~aFV~F~~~e~A~~Av~~l-ng~~i~g~~l~V~ 102 (472)
...++|||+|||.++|+++|+++|++||.|.+|.|+.| .+|+++|||||+|.+.++|.+|++.| |+..|.|+.|.|.
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 45788999999999999999999999999999999887 47899999999999999999999998 8999999999999
Q ss_pred ccccch
Q 012034 103 KAQKKS 108 (472)
Q Consensus 103 ~a~~~~ 108 (472)
||..+.
T Consensus 86 ~A~~~~ 91 (94)
T d2cpha1 86 WADSEV 91 (94)
T ss_dssp ECCCCC
T ss_pred EcCCCC
Confidence 997654
No 20
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.5e-19 Score=147.55 Aligned_cols=84 Identities=33% Similarity=0.604 Sum_probs=78.1
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
..++|||+|||.++|+++|+++|++||+|.+|.++.+ .+|+++|||||+|.+.++|.+|++.||+..|.|+.|.|.++.
T Consensus 7 ~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 7 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3568999999999999999999999999999999998 579999999999999999999999999999999999999987
Q ss_pred cchhH
Q 012034 106 KKSER 110 (472)
Q Consensus 106 ~~~~~ 110 (472)
.+..+
T Consensus 87 ~~~~~ 91 (104)
T d1p1ta_ 87 SEKNK 91 (104)
T ss_dssp CTTHH
T ss_pred CCCCc
Confidence 66543
No 21
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=1.3e-19 Score=146.63 Aligned_cols=84 Identities=31% Similarity=0.463 Sum_probs=78.7
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeec
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 103 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~ 103 (472)
....++|||+|||+++|+++|+++|++||.|.+|.++.| .+|+++|||||+|.+.++|.+|++.||+..|.|+.|.|.+
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~ 84 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 84 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 355778999999999999999999999999999999988 5799999999999999999999999999999999999999
Q ss_pred cccch
Q 012034 104 AQKKS 108 (472)
Q Consensus 104 a~~~~ 108 (472)
+..+.
T Consensus 85 a~~~~ 89 (99)
T d1whwa_ 85 STIKK 89 (99)
T ss_dssp CCCCS
T ss_pred CCCCC
Confidence 98754
No 22
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.3e-19 Score=143.90 Aligned_cols=84 Identities=40% Similarity=0.680 Sum_probs=78.0
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
+..++|||+|||+++|+++|+++|++||.|..+.++.+ .+|+++|||||+|.++++|++|++.||+..|.|+.|.|.++
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 45678999999999999999999999999999998887 57999999999999999999999999999999999999999
Q ss_pred ccchh
Q 012034 105 QKKSE 109 (472)
Q Consensus 105 ~~~~~ 109 (472)
.++.+
T Consensus 83 ~~~~~ 87 (90)
T d1x5sa1 83 GKSSD 87 (90)
T ss_dssp ECCCC
T ss_pred CCCCC
Confidence 76643
No 23
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.4e-19 Score=140.09 Aligned_cols=76 Identities=37% Similarity=0.529 Sum_probs=72.1
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceee
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 101 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V 101 (472)
...++|||+|||.++|+++|+++|++||.|.+|.|++| .+|+++|||||+|.+.++|.+|++.||+..|+|+.|.|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 45678999999999999999999999999999999998 46999999999999999999999999999999999987
No 24
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.3e-19 Score=142.28 Aligned_cols=81 Identities=30% Similarity=0.436 Sum_probs=74.7
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||+++|+++|+++|++||.|.+|.|++| .+|++||||||+|.+.++|.+|++. .+.|+|+.|.|.++
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeC
Confidence 46788999999999999999999999999999999999 4799999999999999999999984 55899999999999
Q ss_pred ccch
Q 012034 105 QKKS 108 (472)
Q Consensus 105 ~~~~ 108 (472)
..+.
T Consensus 84 ~~k~ 87 (90)
T d2cqga1 84 NSKQ 87 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7754
No 25
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=5.4e-20 Score=145.81 Aligned_cols=83 Identities=37% Similarity=0.689 Sum_probs=76.6
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...+||||+|||.++|+++|+++|++||.|.++.|+.+.+ .++|||||+|++.++|.+|++.|||..|+|+.|.|.++.
T Consensus 6 s~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~-~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 6 SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN-GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTT-BCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecC-CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3567899999999999999999999999999999999864 478999999999999999999999999999999999998
Q ss_pred cchh
Q 012034 106 KKSE 109 (472)
Q Consensus 106 ~~~~ 109 (472)
++.+
T Consensus 85 ~~~~ 88 (89)
T d1cvja2 85 SRKE 88 (89)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 7654
No 26
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.9e-19 Score=139.13 Aligned_cols=78 Identities=33% Similarity=0.565 Sum_probs=73.3
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
..++|||+|||+++|+++|+++|++||+|.++.|++| .+|+++|||||+|.+.++|.+|++ ++++.|.|+.|.|.+|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 4578999999999999999999999999999999999 469999999999999999999997 69999999999999874
No 27
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.78 E-value=1.7e-19 Score=155.25 Aligned_cols=83 Identities=25% Similarity=0.483 Sum_probs=77.7
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||+++|+++|+++|++||+|.+|.|+.| .+|++||||||+|.+.++|.+||+.||+..|+|+.|.|.++
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a 119 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALA 119 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34578999999999999999999999999999999998 57999999999999999999999999999999999999998
Q ss_pred ccch
Q 012034 105 QKKS 108 (472)
Q Consensus 105 ~~~~ 108 (472)
..+.
T Consensus 120 ~~~~ 123 (139)
T d1u6fa1 120 ASGH 123 (139)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7654
No 28
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=4.5e-19 Score=141.61 Aligned_cols=83 Identities=35% Similarity=0.578 Sum_probs=77.1
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
....++|||+|||.++|+++|+++|++||+|.+|.++.|..+ ++|||||+|.+.++|.+|++.||+..|.|+.|.|.+|
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~-~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A 86 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 86 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTT-TCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccC-CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 456788999999999999999999999999999999998654 6999999999999999999999999999999999999
Q ss_pred ccch
Q 012034 105 QKKS 108 (472)
Q Consensus 105 ~~~~ 108 (472)
.++.
T Consensus 87 ~~r~ 90 (93)
T d2cq3a1 87 TARV 90 (93)
T ss_dssp CSSC
T ss_pred CcCC
Confidence 8764
No 29
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=1.7e-19 Score=140.28 Aligned_cols=79 Identities=16% Similarity=0.320 Sum_probs=68.6
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
.++|||+|||+++|+++|+++|++||.|..+.++.+ .+|+++|||||+|.+.++|.+|++.|||..+.|+.|.|.++.+
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 368999999999999999999999999988877666 6789999999999999999999999999999999999998864
No 30
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=4.2e-19 Score=144.05 Aligned_cols=82 Identities=21% Similarity=0.443 Sum_probs=77.0
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
+...++|||+|||.++|+++|+++|++||.|.++.+..+.+++++|||||+|.+.++|.+|++.|||..|.|+.+.|.++
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred cc
Q 012034 105 QK 106 (472)
Q Consensus 105 ~~ 106 (472)
.+
T Consensus 95 ~P 96 (101)
T d1x5oa1 95 EP 96 (101)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 31
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.9e-19 Score=146.60 Aligned_cols=82 Identities=37% Similarity=0.531 Sum_probs=75.6
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeec
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 103 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~ 103 (472)
+...++|||+|||+++|+++|+++|++||.|.+|.|+.| .+|+++|||||+|.+.++|.+|++.+|+ .|.|+.|.|.+
T Consensus 7 d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~ 85 (103)
T d2cqda1 7 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNL 85 (103)
T ss_dssp SCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEE
T ss_pred CCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEE
Confidence 456788999999999999999999999999999999998 4699999999999999999999998875 79999999999
Q ss_pred cccc
Q 012034 104 AQKK 107 (472)
Q Consensus 104 a~~~ 107 (472)
+..+
T Consensus 86 a~~~ 89 (103)
T d2cqda1 86 AYLG 89 (103)
T ss_dssp STTT
T ss_pred cCCC
Confidence 8654
No 32
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.1e-19 Score=139.88 Aligned_cols=75 Identities=29% Similarity=0.530 Sum_probs=71.2
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECC-CCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~-~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
++|||+|||+++|+++|+++|++||.|.++.|..|+ +|++||||||+|.+.++|.+|++ ++++.++|+.|.|.+|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 579999999999999999999999999999999985 69999999999999999999997 7999999999999876
No 33
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.7e-19 Score=136.93 Aligned_cols=74 Identities=27% Similarity=0.508 Sum_probs=70.1
Q ss_pred eEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 30 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 30 ~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
+|||+|||+++||++|+++|++||+|.++.+..| .+|+++|||||+|.+.++|++|++ +++..|.|+.|.|.+|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4999999999999999999999999999999998 579999999999999999999997 7999999999999875
No 34
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=4.2e-19 Score=139.33 Aligned_cols=77 Identities=34% Similarity=0.567 Sum_probs=71.6
Q ss_pred EEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCC----CCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 31 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD----GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 31 l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~----g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
|||+|||+++|+++|+++|++||.|.++.|..+.+ +++||||||+|++.++|.+|++.||+..++|+.|.|.++..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 79999999999999999999999999999998742 25799999999999999999999999999999999999865
Q ss_pred c
Q 012034 107 K 107 (472)
Q Consensus 107 ~ 107 (472)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 4
No 35
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.77 E-value=6.1e-19 Score=137.42 Aligned_cols=79 Identities=34% Similarity=0.594 Sum_probs=74.9
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
+++|||+|||.++|+++|+++|++||.|.+++|.+++ +|.++|||||+|.+.++|.+|++.|||..+.|++|+|.|+++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 4689999999999999999999999999999998874 789999999999999999999999999999999999999864
No 36
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.2e-19 Score=145.60 Aligned_cols=80 Identities=21% Similarity=0.366 Sum_probs=74.7
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
..++|||+|||.++|+++|+++|+.||+|.+|.|++| .+|++||||||+|.+.++|.+|++ |||..|.|+.|.|.++.
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 3578999999999999999999999999999999998 579999999999999999999995 99999999999999885
Q ss_pred cc
Q 012034 106 KK 107 (472)
Q Consensus 106 ~~ 107 (472)
.+
T Consensus 96 ~~ 97 (101)
T d2cq4a1 96 AE 97 (101)
T ss_dssp HH
T ss_pred CC
Confidence 44
No 37
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=5.6e-19 Score=140.19 Aligned_cols=82 Identities=27% Similarity=0.389 Sum_probs=75.7
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||.++|+++|+++|+.||.|.+|.+..|..+ .+|||||+|++.++|.+|++.||+..|.|+.|.|.||.
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~-~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS-NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS-SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc-cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 45789999999999999999999999999999999998544 38999999999999999999999999999999999997
Q ss_pred cch
Q 012034 106 KKS 108 (472)
Q Consensus 106 ~~~ 108 (472)
+..
T Consensus 85 ~~~ 87 (90)
T d2cqia1 85 TPS 87 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 38
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.8e-19 Score=140.83 Aligned_cols=78 Identities=36% Similarity=0.590 Sum_probs=72.2
Q ss_pred EEeCCCCCCCCHHHHHHHHhcCCCeeEE-EEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccccch
Q 012034 31 VFVKNLDESTTDEDLKKIFGEYGTITSA-VVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 108 (472)
Q Consensus 31 l~V~nLp~~~tee~L~~~F~~fG~I~~v-~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~~~ 108 (472)
|||+|||.++|+++|+++|++||.|.++ .+++| .+|+++|||||+|.+.++|++|++.||+..+.|+.|.|.++.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 8999999999999999999999998664 67777 579999999999999999999999999999999999999997654
No 39
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.2e-18 Score=134.42 Aligned_cols=76 Identities=32% Similarity=0.537 Sum_probs=74.0
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
.|||+|||+++|+++|+++|++||.|.+++|..+++|+++|||||+|.+.++|.+|++.+||..++|++|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 4999999999999999999999999999999999999999999999999999999999999999999999999985
No 40
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.76 E-value=1.3e-18 Score=137.41 Aligned_cols=81 Identities=25% Similarity=0.477 Sum_probs=76.2
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
.+++|||+||+.++|+++|+++|+.||.|.+|++.+++ +|.++|||||+|.+.++|.+|+..|||..+.|+.|+|+|+.
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 46789999999999999999999999999999999875 78999999999999999999999999999999999999997
Q ss_pred cH
Q 012034 209 RK 210 (472)
Q Consensus 209 ~k 210 (472)
.+
T Consensus 86 ~k 87 (88)
T d1rk8a_ 86 VK 87 (88)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 41
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2e-18 Score=134.39 Aligned_cols=78 Identities=35% Similarity=0.654 Sum_probs=74.2
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
++|||+|||.++++++|+++|++||.|.+|+++++. +|.++|||||+|.+.++|.+|++.|||..+.|++|+|.|+++
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 579999999999999999999999999999999875 678999999999999999999999999999999999999864
No 42
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.7e-18 Score=133.91 Aligned_cols=76 Identities=32% Similarity=0.563 Sum_probs=71.7
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
.++|||+|||+++|+++|+++|++||.|.++.+..| .+++++|||||+|.+.|+|.+|++ ++++.|+|+.|.|.+|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 478999999999999999999999999999999998 578999999999999999999995 8999999999999876
No 43
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1e-18 Score=144.94 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=73.1
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||.++|+++|+++|++||.|.+|.+..+ ++++|||||+|.+.++|..|++.|||+.|.|+.|.|.++.
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~--~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~ 82 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT--PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYN 82 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS--TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc--CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 34678999999999999999999999999999998764 5679999999999999999999999999999999999986
Q ss_pred c
Q 012034 106 K 106 (472)
Q Consensus 106 ~ 106 (472)
.
T Consensus 83 ~ 83 (114)
T d2f9da1 83 A 83 (114)
T ss_dssp H
T ss_pred C
Confidence 4
No 44
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.6e-18 Score=134.36 Aligned_cols=77 Identities=38% Similarity=0.543 Sum_probs=73.9
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
+|||+|||.++|+++|+++|++||.|.+++|++++ +|+++|||||+|.+.++|.+|++.|||..+.|++|+|.|+++
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 69999999999999999999999999999999986 589999999999999999999999999999999999999864
No 45
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=6.1e-19 Score=143.40 Aligned_cols=81 Identities=31% Similarity=0.551 Sum_probs=75.5
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
.++|||+|||+++|+++|+++|++||+|.++.|.+| .++.++|||||+|.+.++|.+|++ ++++.|.|+.|.|.+|.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 578999999999999999999999999999999998 468899999999999999999996 799999999999999987
Q ss_pred chh
Q 012034 107 KSE 109 (472)
Q Consensus 107 ~~~ 109 (472)
+.+
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 46
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.1e-18 Score=135.27 Aligned_cols=78 Identities=23% Similarity=0.323 Sum_probs=73.9
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
..++|||+|||.++|+++|+++|+.||.|.+|.+..+.+|++||||||+|.+.++|.+|++ +++..+.|+.|.|.++.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 4678999999999999999999999999999999999999999999999999999999996 79999999999999864
No 47
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.6e-18 Score=134.68 Aligned_cols=79 Identities=32% Similarity=0.667 Sum_probs=73.3
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecC--eeEEEE
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVS--KPLYVA 205 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~g--k~l~V~ 205 (472)
..+++|||+|||.++|+++|+++|++||.|.+++|++++ +|.++|||||+|.+.++|.+|++.|||..+.| ++|.|+
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 346789999999999999999999999999999999985 68999999999999999999999999999987 569998
Q ss_pred Ec
Q 012034 206 VA 207 (472)
Q Consensus 206 ~a 207 (472)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 48
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.74 E-value=9.8e-20 Score=144.84 Aligned_cols=81 Identities=31% Similarity=0.430 Sum_probs=75.9
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||+++|+++|+++|++||.|.++.|+.+.+|++||||||+|.+.++|.+||+ ||+..|.|+.|.|.++.
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 45678999999999999999999999999999999888899999999999999999999996 99999999999999987
Q ss_pred cc
Q 012034 106 KK 107 (472)
Q Consensus 106 ~~ 107 (472)
.+
T Consensus 90 ~k 91 (91)
T d1fjeb1 90 GR 91 (91)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 49
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=9e-19 Score=142.30 Aligned_cols=84 Identities=36% Similarity=0.561 Sum_probs=78.1
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
..+++|||+|||+++++++|+++|+.||.|.+++++.+. +|.++|||||+|.+.++|..|++.|||..|.|+.|+|.|+
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 346789999999999999999999999999999998874 7899999999999999999999999999999999999999
Q ss_pred ccHHH
Q 012034 208 QRKEE 212 (472)
Q Consensus 208 ~~k~~ 212 (472)
..+.+
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 87753
No 50
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.2e-18 Score=136.43 Aligned_cols=80 Identities=29% Similarity=0.473 Sum_probs=75.7
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
..+|||+|||+++|+++|+++|+.||.|.+|+|+.++ +|.++|||||+|.+.++|.+|++.+||..++|++|.|.++++
T Consensus 5 ~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p 84 (89)
T d2cqba1 5 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKP 84 (89)
T ss_dssp CSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 3589999999999999999999999999999999886 589999999999999999999999999999999999999976
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
+
T Consensus 85 ~ 85 (89)
T d2cqba1 85 M 85 (89)
T ss_dssp C
T ss_pred C
Confidence 4
No 51
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=6.9e-19 Score=138.40 Aligned_cols=80 Identities=26% Similarity=0.456 Sum_probs=70.5
Q ss_pred CcceEEeCCCCCCCC-HHHHHHHHhcCCCeeEEEEEEC--CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeec
Q 012034 27 KFNNVFVKNLDESTT-DEDLKKIFGEYGTITSAVVMRD--GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 103 (472)
Q Consensus 27 ~~~~l~V~nLp~~~t-ee~L~~~F~~fG~I~~v~i~~d--~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~ 103 (472)
..++|||+|||.++| +++|+++|++||.|.+|.|..+ .+++++|||||+|.+.++|.+|++ ||++.+.|+.|.|.+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 467899999999986 5569999999999999998765 478999999999999999999996 999999999999999
Q ss_pred cccc
Q 012034 104 AQKK 107 (472)
Q Consensus 104 a~~~ 107 (472)
+.++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8765
No 52
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.74 E-value=3.3e-18 Score=134.11 Aligned_cols=79 Identities=33% Similarity=0.653 Sum_probs=73.7
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecC--eeEEEE
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVS--KPLYVA 205 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~g--k~l~V~ 205 (472)
..+++|||+|||.++|+++|+++|++||.|.++++++++ +|.++|||||+|.+.++|.+|++.|||..+.| ++|.|+
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 345789999999999999999999999999999999875 78999999999999999999999999999976 889999
Q ss_pred Ec
Q 012034 206 VA 207 (472)
Q Consensus 206 ~a 207 (472)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 53
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.7e-18 Score=135.55 Aligned_cols=81 Identities=23% Similarity=0.300 Sum_probs=76.0
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
.+++|||+|||.++|+++|+++|+.||.|.+|.++.+. ++.++|||||+|.+.++|..|++.|||..++|++|+|.|+.
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 45789999999999999999999999999999999875 68899999999999999999999999999999999999986
Q ss_pred cH
Q 012034 209 RK 210 (472)
Q Consensus 209 ~k 210 (472)
..
T Consensus 86 ~~ 87 (93)
T d1h2vz_ 86 GF 87 (93)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 54
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=2.3e-18 Score=138.73 Aligned_cols=83 Identities=27% Similarity=0.420 Sum_probs=75.7
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHC------CCccCCcc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALN------GKKFDDRE 98 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~ln------g~~i~g~~ 98 (472)
...++|||+|||+++|+++|+++|++||.|.++.++.+ .+++++|||||+|.+.++|.+|++.|| |..+.|+.
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~ 85 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQ 85 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCE
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEE
Confidence 45678999999999999999999999999999999888 478899999999999999999999987 56689999
Q ss_pred eeeeccccch
Q 012034 99 WYVGKAQKKS 108 (472)
Q Consensus 99 l~V~~a~~~~ 108 (472)
|.|.++..+.
T Consensus 86 l~v~~a~~k~ 95 (98)
T d1x4ha1 86 LKVDLAVTRD 95 (98)
T ss_dssp EEEECCCCCC
T ss_pred EEEEECCCCC
Confidence 9999998764
No 55
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=7.6e-19 Score=134.24 Aligned_cols=74 Identities=23% Similarity=0.416 Sum_probs=69.2
Q ss_pred eEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 30 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 30 ~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
+|||+|||+++|+++|+++|++||.|.+|.|+.| .++++||||||+|++.++|.+|++ .+++.|+|+.|.|..|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 5999999999999999999999999999999998 579999999999999999999997 4788999999999865
No 56
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.5e-18 Score=135.49 Aligned_cols=81 Identities=31% Similarity=0.484 Sum_probs=76.4
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
..++|||+|||.++|+++|+++|+.||.|.+++|+.+. +|.++|||||+|.+.++|.+|++.|||..++|+.|.|+|++
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ak 86 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAK 86 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeee
Confidence 34689999999999999999999999999999999985 68899999999999999999999999999999999999998
Q ss_pred cH
Q 012034 209 RK 210 (472)
Q Consensus 209 ~k 210 (472)
++
T Consensus 87 p~ 88 (90)
T d2cq0a1 87 PS 88 (90)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 57
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.1e-18 Score=136.62 Aligned_cols=82 Identities=28% Similarity=0.474 Sum_probs=77.0
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
..++|||+|||.++|+++|+++|++||.|.+++|++++ +|.++|||||+|.+.++|.+|++.|||..++|+.|+|.+|.
T Consensus 8 ~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~ 87 (93)
T d1x5ua1 8 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKAS 87 (93)
T ss_dssp TTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETT
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 44689999999999999999999999999999999885 78999999999999999999999999999999999999997
Q ss_pred cHH
Q 012034 209 RKE 211 (472)
Q Consensus 209 ~k~ 211 (472)
.+.
T Consensus 88 ~~~ 90 (93)
T d1x5ua1 88 AHN 90 (93)
T ss_dssp TTS
T ss_pred CCC
Confidence 653
No 58
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=1.7e-18 Score=132.34 Aligned_cols=74 Identities=32% Similarity=0.539 Sum_probs=70.1
Q ss_pred eEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECC-CCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 30 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 30 ~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~-~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
+|||+|||.++||++|+++|++||.|.++.+..+. +++++|||||+|.+.++|.+|++ +|++.|+|+.|.|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 49999999999999999999999999999998884 68999999999999999999996 9999999999999876
No 59
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.4e-18 Score=137.51 Aligned_cols=81 Identities=44% Similarity=0.703 Sum_probs=75.2
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
..+|||+|||.++|+++|+++|+.||.|.+++|+.+.. .++|||||+|.+.++|.+|++.|||..++|+.|.|.+++.+
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~-~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN-GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTT-BCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecC-CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 34799999999999999999999999999999998854 47999999999999999999999999999999999999877
Q ss_pred HH
Q 012034 211 EE 212 (472)
Q Consensus 211 ~~ 212 (472)
.+
T Consensus 87 ~~ 88 (89)
T d1cvja2 87 KE 88 (89)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 60
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=4.3e-18 Score=136.06 Aligned_cols=81 Identities=22% Similarity=0.488 Sum_probs=75.7
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC--CCCcccEEEEEcCCHHHHHHHHHHh-CCcEecCeeEEEEE
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP--SGISKGSGFVAFSTPEEASRALAEM-NGKMIVSKPLYVAV 206 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~--~g~s~g~afV~f~s~~~A~~Ai~~l-~g~~i~gk~l~V~~ 206 (472)
..++|||+|||.++++++|+++|+.||.|.+|+|+++. +|.++|||||+|.+.++|.+|++.| ||..++|++|.|.|
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 45689999999999999999999999999999998874 6899999999999999999999998 89999999999999
Q ss_pred cccH
Q 012034 207 AQRK 210 (472)
Q Consensus 207 a~~k 210 (472)
|..+
T Consensus 87 A~~~ 90 (94)
T d2cpha1 87 ADSE 90 (94)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9865
No 61
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=4.2e-18 Score=136.65 Aligned_cols=77 Identities=22% Similarity=0.389 Sum_probs=72.6
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||.++|+++|+++|++||.|.+|++..| ||||||+|.+.++|.+|++.||+..|.|+.|+|.|++
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~-----kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak 90 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 90 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec-----ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 45678999999999999999999999999999999976 7999999999999999999999999999999999987
Q ss_pred cc
Q 012034 106 KK 107 (472)
Q Consensus 106 ~~ 107 (472)
.+
T Consensus 91 ~~ 92 (96)
T d1x4ga1 91 ES 92 (96)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 62
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=5.1e-18 Score=131.74 Aligned_cols=78 Identities=15% Similarity=0.303 Sum_probs=68.4
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeC-CCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~-~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
++|||+|||+++|+++|+++|+.||.|..+.++.+ ..|.++|||||+|.+.++|.+|++.|||..++|++|+|+++++
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 68999999999999999999999999988877655 4788999999999999999999999999999999999999864
No 63
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=4.1e-18 Score=133.85 Aligned_cols=77 Identities=27% Similarity=0.454 Sum_probs=71.9
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
..++|||+|||.++++++|+++|++||+|.+|.+.++ +|||||+|++.++|.+|++.|||..|.|+.|.|.+|..
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~-----k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~ 81 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACH 81 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT-----TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 3567999999999999999999999999999999865 78999999999999999999999999999999999976
Q ss_pred ch
Q 012034 107 KS 108 (472)
Q Consensus 107 ~~ 108 (472)
+.
T Consensus 82 ~~ 83 (86)
T d2cpja1 82 SA 83 (86)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 64
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.3e-17 Score=132.93 Aligned_cols=81 Identities=27% Similarity=0.501 Sum_probs=75.4
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
...++|||+|||.++++++|+++|+.||.|.+|+++.+..+ ++|||||+|.+.++|.+|+..|||..++|+.|+|.+|.
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~-~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTT-TCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccC-CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 34568999999999999999999999999999999988654 79999999999999999999999999999999999998
Q ss_pred cH
Q 012034 209 RK 210 (472)
Q Consensus 209 ~k 210 (472)
.+
T Consensus 88 ~r 89 (93)
T d2cq3a1 88 AR 89 (93)
T ss_dssp SS
T ss_pred cC
Confidence 75
No 65
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=9.7e-18 Score=135.34 Aligned_cols=81 Identities=31% Similarity=0.501 Sum_probs=76.3
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
.++|||+||++++|+++|+++|++||.|.+++|+.+. ++.++|||||+|.+.++|.+|++.||+..|+|+.|+|.++..
T Consensus 8 ~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~ 87 (99)
T d1whwa_ 8 SGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTI 87 (99)
T ss_dssp CEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCC
T ss_pred CCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 4579999999999999999999999999999999875 789999999999999999999999999999999999999887
Q ss_pred HH
Q 012034 210 KE 211 (472)
Q Consensus 210 k~ 211 (472)
+.
T Consensus 88 ~~ 89 (99)
T d1whwa_ 88 KK 89 (99)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 66
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.2e-17 Score=130.17 Aligned_cols=75 Identities=27% Similarity=0.399 Sum_probs=71.0
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEE
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 204 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V 204 (472)
.+++|||+||+.++|+++|+++|++||.|.+|+|+.++ +|.++|||||+|.+.++|.+|++.|||..|+|++|+|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 35689999999999999999999999999999999885 5889999999999999999999999999999999987
No 67
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=5.2e-18 Score=137.47 Aligned_cols=84 Identities=30% Similarity=0.451 Sum_probs=75.2
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCee--------EEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccC
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT--------SAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFD 95 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~--------~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~ 95 (472)
....++|||+|||.++|+++|+++|+.||.|. .+.+..| .+|+++|||||+|.++++|.+|++.|||..|.
T Consensus 5 ~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~ 84 (101)
T d2cpea1 5 DSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ 84 (101)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEEC
Confidence 35678999999999999999999999999884 4555565 46899999999999999999999999999999
Q ss_pred Ccceeeeccccch
Q 012034 96 DREWYVGKAQKKS 108 (472)
Q Consensus 96 g~~l~V~~a~~~~ 108 (472)
|+.|.|.++..+.
T Consensus 85 gr~i~V~~a~~~~ 97 (101)
T d2cpea1 85 GSKLKVSLARKKP 97 (101)
T ss_dssp TEECEEECSSCCC
T ss_pred CEEEEEEEcCCCC
Confidence 9999999997654
No 68
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2e-18 Score=133.81 Aligned_cols=76 Identities=25% Similarity=0.466 Sum_probs=69.4
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCC-ccCCcceeeeccccc
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGK-KFDDREWYVGKAQKK 107 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~-~i~g~~l~V~~a~~~ 107 (472)
++|||+|||.++|+++|+++|++||.|.++.+..+ ||||||+|.+.++|.+|++.|||. .+.|+.|.|.++..+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-----rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k 76 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK-----SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSK 76 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE-----TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc-----cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCc
Confidence 57999999999999999999999999988777654 799999999999999999999996 599999999999876
Q ss_pred hh
Q 012034 108 SE 109 (472)
Q Consensus 108 ~~ 109 (472)
..
T Consensus 77 ~~ 78 (80)
T d2cqha1 77 KL 78 (80)
T ss_dssp CC
T ss_pred Cc
Confidence 53
No 69
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.2e-18 Score=141.62 Aligned_cols=84 Identities=20% Similarity=0.322 Sum_probs=78.4
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||.++|+++|+++|+.||.|.++.++.+ .+|+++|||||+|.+.++|.+|++.|||..|.|+.|.|.|+
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 45789999999999999999999999999999998887 57899999999999999999999999999999999999999
Q ss_pred ccchh
Q 012034 105 QKKSE 109 (472)
Q Consensus 105 ~~~~~ 109 (472)
..+.+
T Consensus 96 k~k~~ 100 (102)
T d2cpxa1 96 KNKKQ 100 (102)
T ss_dssp CCCSC
T ss_pred CCccc
Confidence 87654
No 70
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=6.4e-18 Score=132.44 Aligned_cols=78 Identities=29% Similarity=0.563 Sum_probs=74.3
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
.|||+|||+++|+++|+++|+.||.|++++|++|+ +|.++|||||+|.+.++|..|++.|||..+.|++|.|.++...
T Consensus 3 rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 3 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 59999999999999999999999999999999985 6899999999999999999999999999999999999998753
No 71
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=5.7e-18 Score=139.65 Aligned_cols=77 Identities=21% Similarity=0.301 Sum_probs=71.1
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
+..++|||+|||.++|+++|+++|++||+|.+|.|. +++|||||+|.+.++|.+|++.|||..|.|+.|+|.|+.
T Consensus 8 r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~-----~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 8 RSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP-----EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC-----SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee-----ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 456899999999999999999999999999999874 458999999999999999999999999999999999986
Q ss_pred cc
Q 012034 106 KK 107 (472)
Q Consensus 106 ~~ 107 (472)
..
T Consensus 83 ~~ 84 (111)
T d1whxa_ 83 IG 84 (111)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 72
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=9.1e-18 Score=131.56 Aligned_cols=77 Identities=38% Similarity=0.663 Sum_probs=71.3
Q ss_pred eeeecCCCCccHHHHHHHHhccCceEEEEEeeCCC----CCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 134 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS----GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 134 l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~----g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
|||+|||+++|+++|+++|+.||.|.+++|.++++ +.++|||||+|.+.++|.+|++.+||..++|+.|.|.++++
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 79999999999999999999999999999988753 24799999999999999999999999999999999999865
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 3
No 73
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=3.8e-18 Score=131.05 Aligned_cols=75 Identities=35% Similarity=0.571 Sum_probs=71.0
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
|+|||+|||+++|+++|+++|++||.|.+++|++|+ +|+++|||||+|.+.++|.+|++ ++++.++|+.|.|++|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 579999999999999999999999999999999986 58999999999999999999996 7999999999999976
No 74
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.1e-17 Score=133.94 Aligned_cols=79 Identities=25% Similarity=0.404 Sum_probs=72.4
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||.++|+++|+++|+.||.|..+.+..+ +.++|||||+|++.++|..|++.||++.|.|+.|.|+++.
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~--~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~ 89 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR--RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 89 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS--SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc--ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEecc
Confidence 45678999999999999999999999999999887554 4568999999999999999999999999999999999986
Q ss_pred c
Q 012034 106 K 106 (472)
Q Consensus 106 ~ 106 (472)
.
T Consensus 90 ~ 90 (95)
T d1x4aa1 90 S 90 (95)
T ss_dssp C
T ss_pred C
Confidence 5
No 75
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.1e-17 Score=135.37 Aligned_cols=80 Identities=23% Similarity=0.468 Sum_probs=74.6
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
++|||+||+.++|+++|+++|+.||.|.+|+|+++. +|.++|||||+|.+.++|.+|+ .|||..|+|+.|.|.++..+
T Consensus 19 ~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~~a~~~ 97 (101)
T d2cq4a1 19 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAE 97 (101)
T ss_dssp TEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEEEHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEEECCCC
Confidence 479999999999999999999999999999999985 6899999999999999999999 59999999999999998765
Q ss_pred HH
Q 012034 211 EE 212 (472)
Q Consensus 211 ~~ 212 (472)
..
T Consensus 98 ~n 99 (101)
T d2cq4a1 98 KN 99 (101)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 76
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.9e-17 Score=131.05 Aligned_cols=80 Identities=29% Similarity=0.429 Sum_probs=73.3
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
..++|||+|||+++|+++|+++|+.||.|.+|+|+.|+ +|.++|||||+|.+.++|.+|++. ...++|+.|.|+++.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECCC
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCC
Confidence 35689999999999999999999999999999999986 699999999999999999999974 458999999999998
Q ss_pred cHH
Q 012034 209 RKE 211 (472)
Q Consensus 209 ~k~ 211 (472)
.++
T Consensus 85 ~k~ 87 (90)
T d2cqga1 85 SKQ 87 (90)
T ss_dssp TTC
T ss_pred CCC
Confidence 764
No 77
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=9.1e-18 Score=131.87 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=72.9
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeE-EEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~-v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||.++|+++|+++|+.||.|.. +.+..+.+|+++|||||+|++.++|.+|++.||++.|.|+.|+|..+
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45678999999999999999999999999876 56777789999999999999999999999999999999999999764
No 78
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.1e-17 Score=136.23 Aligned_cols=83 Identities=28% Similarity=0.534 Sum_probs=77.2
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
++|||+||+.++|+++|+++|+.||.|.+|+|+.++ +|.++|||||+|.+.++|.+|++.|||..|.|+.|+|.++..+
T Consensus 9 rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~~ 88 (104)
T d1p1ta_ 9 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASE 88 (104)
T ss_dssp SCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTCT
T ss_pred CEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 479999999999999999999999999999998875 6899999999999999999999999999999999999999876
Q ss_pred HHHH
Q 012034 211 EERR 214 (472)
Q Consensus 211 ~~~~ 214 (472)
..+.
T Consensus 89 ~~~~ 92 (104)
T d1p1ta_ 89 KNKE 92 (104)
T ss_dssp THHH
T ss_pred CCcc
Confidence 5443
No 79
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=5.9e-18 Score=135.82 Aligned_cols=81 Identities=17% Similarity=0.251 Sum_probs=72.7
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhcCCC-eeEEEEEECC--CCCceeEEEEEeCCHHHHHHHHHHHCCC--ccCCcceeeec
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGEYGT-ITSAVVMRDG--DGKSKCFGFVNFENADDAAKAVEALNGK--KFDDREWYVGK 103 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~fG~-I~~v~i~~d~--~g~skG~aFV~F~~~e~A~~Av~~lng~--~i~g~~l~V~~ 103 (472)
++|||+|||.++|+++|+++|++||+ |.++.+++|. +|+++|||||+|+++++|.+|++.|++. .+.|+.|.|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 67999999999999999999999996 9999999883 5889999999999999999999998654 45799999999
Q ss_pred cccchh
Q 012034 104 AQKKSE 109 (472)
Q Consensus 104 a~~~~~ 109 (472)
|..+.+
T Consensus 82 A~p~~~ 87 (96)
T d2disa1 82 AEPEID 87 (96)
T ss_dssp SCSSCS
T ss_pred cCCCCC
Confidence 976554
No 80
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=5.9e-18 Score=132.02 Aligned_cols=78 Identities=38% Similarity=0.718 Sum_probs=72.1
Q ss_pred eeeecCCCCccHHHHHHHHhccCceEEE-EEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccHH
Q 012034 134 LYIKNLGDSIDDEKLKELFSEFGTITSC-KVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKE 211 (472)
Q Consensus 134 l~V~nL~~~~t~e~L~~~F~~~G~I~~v-~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k~ 211 (472)
|||+|||.++|+++|+++|++||.|.++ +|+++. +|+++|||||+|.+.++|.+|++.|+|..++|++|+|.++..++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999999765 677774 68899999999999999999999999999999999999998764
No 81
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.70 E-value=1.7e-17 Score=126.71 Aligned_cols=74 Identities=26% Similarity=0.278 Sum_probs=69.0
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
|+|||+|||+++|+++|+++|+.||.|.++.+..+.++. +|||||+|+++++|.+|++ +|++.|+|+.|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~-~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKN-FRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSS-SEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecccc-ceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 689999999999999999999999999999999997665 5799999999999999995 8999999999999865
No 82
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.5e-17 Score=128.48 Aligned_cols=75 Identities=28% Similarity=0.409 Sum_probs=69.3
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
.+.++|||+||+ +|+++|+++|++||.|.++.+.++ +|||||+|++.++|.+|+++||+..+.|+.|.|.|+.
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~-----~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP-----RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT-----TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC-----CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 457899999985 999999999999999999998754 7899999999999999999999999999999999997
Q ss_pred cc
Q 012034 106 KK 107 (472)
Q Consensus 106 ~~ 107 (472)
++
T Consensus 76 ~~ 77 (79)
T d2bz2a1 76 KQ 77 (79)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 83
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=5.1e-18 Score=128.65 Aligned_cols=70 Identities=34% Similarity=0.554 Sum_probs=66.6
Q ss_pred EEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCccee
Q 012034 31 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 100 (472)
Q Consensus 31 l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~ 100 (472)
|||+|||.++|+++|+++|++||.|.++.+..+ .+++++|||||+|.+.++|.+|++.|||+.|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999999988 5789999999999999999999999999999998764
No 84
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=6.6e-18 Score=134.14 Aligned_cols=83 Identities=28% Similarity=0.469 Sum_probs=74.1
Q ss_pred CcceEEeCCCCCCCCHHHHHH----HHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeee
Q 012034 27 KFNNVFVKNLDESTTDEDLKK----IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVG 102 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~----~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~ 102 (472)
..++|||+|||.++|+++|++ +|++||+|.+|.+.. +++++|||||+|++.++|.+|++.||+..+.|+.|.|.
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~--~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~ 79 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR--SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQ 79 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH--HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee--eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 468999999999999999875 689999999987754 56789999999999999999999999999999999999
Q ss_pred ccccchhHH
Q 012034 103 KAQKKSERE 111 (472)
Q Consensus 103 ~a~~~~~~~ 111 (472)
||..+++..
T Consensus 80 ~ak~~~~~~ 88 (91)
T d1nu4a_ 80 YAKTDSDII 88 (91)
T ss_dssp ECSSCCTHH
T ss_pred EeCCCchhh
Confidence 998876543
No 85
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=4.7e-17 Score=128.87 Aligned_cols=81 Identities=32% Similarity=0.509 Sum_probs=74.5
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
..++|||+|||.++|+++|+++|+.||.|.+|++..+..+ .+|||||+|.+.++|.+|++.+||..+.|+.|+|.|+..
T Consensus 7 ~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~-~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~ 85 (90)
T d2cqia1 7 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS-NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 85 (90)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS-SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc-cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 3568999999999999999999999999999999988544 489999999999999999999999999999999999976
Q ss_pred HH
Q 012034 210 KE 211 (472)
Q Consensus 210 k~ 211 (472)
+.
T Consensus 86 ~~ 87 (90)
T d2cqia1 86 PS 87 (90)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 86
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.69 E-value=1.7e-17 Score=142.45 Aligned_cols=80 Identities=35% Similarity=0.559 Sum_probs=75.3
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
.++|||+|||+++|+++|+++|+.||.|++|+|++++ +|.++|||||+|.+.++|.+|++.|||..|+|++|+|.++..
T Consensus 42 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~ 121 (139)
T d1u6fa1 42 LRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAAS 121 (139)
T ss_dssp TSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 3579999999999999999999999999999999885 688999999999999999999999999999999999999875
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
+
T Consensus 122 ~ 122 (139)
T d1u6fa1 122 G 122 (139)
T ss_dssp C
T ss_pred C
Confidence 4
No 87
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=2.1e-17 Score=129.79 Aligned_cols=80 Identities=28% Similarity=0.512 Sum_probs=69.7
Q ss_pred ccceeeeecCCCCccH-HHHHHHHhccCceEEEEEeeC--CCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEE
Q 012034 130 QGLNLYIKNLGDSIDD-EKLKELFSEFGTITSCKVMRD--PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 206 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~-e~L~~~F~~~G~I~~v~i~~~--~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~ 206 (472)
.+.+|||+|||.++++ ++|+++|++||.|++|+|..+ .++.++|||||+|.+.++|.+|++ +||..++|+.|.|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 3568999999998865 569999999999999998764 378899999999999999999994 999999999999999
Q ss_pred cccH
Q 012034 207 AQRK 210 (472)
Q Consensus 207 a~~k 210 (472)
+..+
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8764
No 88
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=5e-17 Score=134.59 Aligned_cols=78 Identities=23% Similarity=0.393 Sum_probs=73.0
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
+++|||+|||.++|+++|+++|+.||.|.+|++..+ +.++|||||+|.+.++|..|++.|||..|+|+.|.|.++..+
T Consensus 7 ~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~--~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~ 84 (114)
T d2f9da1 7 NRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT--PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNAN 84 (114)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS--TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc--CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 468999999999999999999999999999999865 678999999999999999999999999999999999998654
No 89
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2e-17 Score=131.02 Aligned_cols=81 Identities=28% Similarity=0.528 Sum_probs=75.1
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
..+|||+|||+++|+++|+++|+.||.|..+.++.+. +|.++|||||.|.+.++|.+|+..|||..++|+.|.|.++.+
T Consensus 5 ~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~ 84 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84 (90)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEEC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 3479999999999999999999999999999887764 688999999999999999999999999999999999999876
Q ss_pred HH
Q 012034 210 KE 211 (472)
Q Consensus 210 k~ 211 (472)
+.
T Consensus 85 ~~ 86 (90)
T d1x5sa1 85 SS 86 (90)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 90
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.1e-17 Score=133.27 Aligned_cols=79 Identities=28% Similarity=0.421 Sum_probs=73.2
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
.++|||+|||+++|+++|+++|+.||.|.+++|+.+. +|+++|||||+|.+.++|.+|++.+|+ .|+|++|.|.++..
T Consensus 10 ~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~~ 88 (103)
T d2cqda1 10 FTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAYL 88 (103)
T ss_dssp SSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEESTT
T ss_pred CcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcCC
Confidence 3579999999999999999999999999999999886 589999999999999999999998876 79999999999875
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
+
T Consensus 89 ~ 89 (103)
T d2cqda1 89 G 89 (103)
T ss_dssp T
T ss_pred C
Confidence 4
No 91
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.69 E-value=3.3e-17 Score=127.71 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=70.2
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccC-Ccceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD-DREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~-g~~l~V~~a 104 (472)
...++|||+|||.++|+++|+++|++||.|.++.++++ .+|||||+|.+.++|.+|++.|||..|. |+.|.|.||
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~a 81 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFA 81 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEe
Confidence 45789999999999999999999999999999999765 3689999999999999999999999985 689999998
Q ss_pred cc
Q 012034 105 QK 106 (472)
Q Consensus 105 ~~ 106 (472)
++
T Consensus 82 kk 83 (83)
T d2b0ga1 82 KK 83 (83)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 92
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=4.5e-17 Score=128.38 Aligned_cols=78 Identities=17% Similarity=0.348 Sum_probs=70.2
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCcc-CCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKF-DDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i-~g~~l~V~~a 104 (472)
...++|||+|||.++|+++|+++|++||.|.++.+..+ +++|||||+|++.++|.+|+..|||..+ +|+.|.|.++
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~---~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~s 84 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ---KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFS 84 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS---SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee---cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeC
Confidence 34678999999999999999999999999988877654 4578999999999999999999999988 5899999998
Q ss_pred cc
Q 012034 105 QK 106 (472)
Q Consensus 105 ~~ 106 (472)
+.
T Consensus 85 k~ 86 (88)
T d2adca2 85 KS 86 (88)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 93
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=4.3e-17 Score=127.93 Aligned_cols=78 Identities=31% Similarity=0.415 Sum_probs=71.1
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||.++|+++|+++|++||.|..+.+.. ++|||||+|.+.++|.+|++.||+..|.|+.|.|.|+.
T Consensus 6 ~~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~-----~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 6 SSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK-----IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE-----CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred cCCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc-----ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 3467899999999999999999999999998887754 48999999999999999999999999999999999987
Q ss_pred cch
Q 012034 106 KKS 108 (472)
Q Consensus 106 ~~~ 108 (472)
++.
T Consensus 81 P~~ 83 (86)
T d2cpda1 81 PVD 83 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 94
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=8.1e-17 Score=125.70 Aligned_cols=76 Identities=34% Similarity=0.543 Sum_probs=71.4
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
.+|||+|||+++|+++|+++|+.||.|.+++|+.|. +|.++|||||+|.+.++|.+|++ ++++.|+|+.|.|+.|.
T Consensus 7 ~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred cEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 479999999999999999999999999999999986 59999999999999999999996 69999999999998874
No 95
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=3.4e-17 Score=134.47 Aligned_cols=76 Identities=24% Similarity=0.402 Sum_probs=70.2
Q ss_pred cceEEeCCCC-CCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecccc
Q 012034 28 FNNVFVKNLD-ESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 106 (472)
Q Consensus 28 ~~~l~V~nLp-~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~ 106 (472)
.++|||+||+ ..+|+++|+++|++||.|.+|.|++|. +|||||+|++.++|.+|++.|||..|.|+.|.|.++..
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 5789999995 569999999999999999999999873 78999999999999999999999999999999999864
Q ss_pred c
Q 012034 107 K 107 (472)
Q Consensus 107 ~ 107 (472)
.
T Consensus 78 ~ 78 (109)
T d2adca1 78 Q 78 (109)
T ss_dssp C
T ss_pred C
Confidence 3
No 96
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=1.6e-17 Score=131.33 Aligned_cols=76 Identities=24% Similarity=0.426 Sum_probs=68.3
Q ss_pred CcceEEeCCCCCCCCHHHH---HHHHhcCCCeeEEEEEECC-CC---CceeEEEEEeCCHHHHHHHHHHHCCCccCCcce
Q 012034 27 KFNNVFVKNLDESTTDEDL---KKIFGEYGTITSAVVMRDG-DG---KSKCFGFVNFENADDAAKAVEALNGKKFDDREW 99 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L---~~~F~~fG~I~~v~i~~d~-~g---~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l 99 (472)
..++|||+|||+++++++| +++|++||+|.+|.+.+|. ++ ..+|||||+|++.++|.+|++.|||..++|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3567999999999999999 7789999999999999984 33 345999999999999999999999999999999
Q ss_pred eee
Q 012034 100 YVG 102 (472)
Q Consensus 100 ~V~ 102 (472)
+|.
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 874
No 97
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.68 E-value=4.2e-18 Score=135.21 Aligned_cols=81 Identities=22% Similarity=0.352 Sum_probs=75.2
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
....+|||+|||.++|+++|+++|+.||.|.+++|+.+.+|+++|||||+|.+.++|.+|++ +||..++|+.|.|.+++
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 34568999999999999999999999999999999887889999999999999999999995 99999999999999987
Q ss_pred cH
Q 012034 209 RK 210 (472)
Q Consensus 209 ~k 210 (472)
.|
T Consensus 90 ~k 91 (91)
T d1fjeb1 90 GR 91 (91)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 98
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=3e-17 Score=133.13 Aligned_cols=80 Identities=18% Similarity=0.176 Sum_probs=73.4
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
....+|||+|||+++|+++|+++|+.||. .++.++++.+++++|||||+|++.++|.+|++ +|++.|.||.|.|.++.
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~ 90 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNS 90 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEEC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcC
Confidence 45678999999999999999999999984 57888999899999999999999999999996 89999999999999887
Q ss_pred cc
Q 012034 106 KK 107 (472)
Q Consensus 106 ~~ 107 (472)
..
T Consensus 91 ~~ 92 (102)
T d1weza_ 91 TA 92 (102)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 99
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.8e-17 Score=133.79 Aligned_cols=81 Identities=25% Similarity=0.422 Sum_probs=71.8
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC--CCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeec
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD--GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 103 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d--~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~ 103 (472)
...++|||+|||+++|+++|+++|+.|| |.++.++.+ .+++++|||||+|.+.++|++|+ .||+..|.|+.|+|.+
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEE
Confidence 3568999999999999999999999999 677777766 46889999999999999998777 4999999999999999
Q ss_pred cccch
Q 012034 104 AQKKS 108 (472)
Q Consensus 104 a~~~~ 108 (472)
+..+.
T Consensus 91 a~~~~ 95 (104)
T d1wi8a_ 91 ADQAQ 95 (104)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 87653
No 100
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.68 E-value=1.8e-17 Score=132.99 Aligned_cols=79 Identities=28% Similarity=0.418 Sum_probs=72.2
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
+..++|||+|||.++|+++|+++|++||.|..+. .+++++|||||+|.+.++|.+|++.||+..|.|+.|.|.|+.
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~ 89 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVS----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTG 89 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEE----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeee----ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 4578999999999999999999999999887653 367899999999999999999999999999999999999998
Q ss_pred cch
Q 012034 106 KKS 108 (472)
Q Consensus 106 ~~~ 108 (472)
.+.
T Consensus 90 ~k~ 92 (96)
T d1fjca_ 90 EKG 92 (96)
T ss_dssp SSC
T ss_pred CCC
Confidence 764
No 101
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=3.8e-17 Score=124.79 Aligned_cols=74 Identities=28% Similarity=0.536 Sum_probs=68.8
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
.|||+|||+++|+++|+++|++||.|.+++|.+++ +|+++|||||+|.+.++|.+|++ +++..|+|+.|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 38999999999999999999999999999999885 68899999999999999999996 7999999999998643
No 102
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2e-17 Score=130.14 Aligned_cols=74 Identities=34% Similarity=0.371 Sum_probs=68.2
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccccch
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 108 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~~~ 108 (472)
++|||+|||+++|+++|+++|++||+|.++.+.+| |||||+|.+.++|.+||+.|||..|.|+.|.|.++..+.
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccccc------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 46999999999999999999999999999998654 799999999999999999999999999999998876543
No 103
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3.1e-17 Score=133.16 Aligned_cols=80 Identities=34% Similarity=0.538 Sum_probs=74.0
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
++|||+|||+++|+++|+++|++||.|.++.|.++. ++.++|||||+|.+.++|.+|+ .+++..|+|+.|.|.++..+
T Consensus 21 ~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al-~~~~~~l~G~~i~V~~a~~k 99 (103)
T d1x4ba1 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-AARPHSIDGRVVEPKRAVAR 99 (103)
T ss_dssp TEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHH-TSCSEEETTEEEEEECCSSC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHH-HhCCCeECCEEEEEEECccc
Confidence 479999999999999999999999999999999886 5789999999999999999999 57999999999999998876
Q ss_pred HH
Q 012034 211 EE 212 (472)
Q Consensus 211 ~~ 212 (472)
++
T Consensus 100 e~ 101 (103)
T d1x4ba1 100 EE 101 (103)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 104
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=5.7e-17 Score=132.91 Aligned_cols=80 Identities=16% Similarity=0.280 Sum_probs=72.2
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCcc--CCcceeee
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKF--DDREWYVG 102 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i--~g~~l~V~ 102 (472)
.....+|||+|||+++|+++|+++|++||.|.++.+..+ +++|||||+|++.++|.+|++.||+..| .++.|.|.
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~---~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~ 80 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTK---NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRID 80 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEE---TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEE
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEee---CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEE
Confidence 356778999999999999999999999999999999987 4589999999999999999999999998 57788888
Q ss_pred ccccc
Q 012034 103 KAQKK 107 (472)
Q Consensus 103 ~a~~~ 107 (472)
++..+
T Consensus 81 ~s~~~ 85 (108)
T d2adba1 81 FSKLT 85 (108)
T ss_dssp ECSSC
T ss_pred ecCCc
Confidence 87654
No 105
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3e-17 Score=132.02 Aligned_cols=75 Identities=28% Similarity=0.463 Sum_probs=68.4
Q ss_pred CCcceEEeCCCC-CCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLD-ESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp-~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+||+ ..+++++|+++|++||.|.++.| +||||||+|++.++|++||+.|||+.|.|+.|.|.++
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i-------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 85 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV-------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE-------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEET
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE-------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 445679999997 67889999999999999999988 3789999999999999999999999999999999998
Q ss_pred ccc
Q 012034 105 QKK 107 (472)
Q Consensus 105 ~~~ 107 (472)
..+
T Consensus 86 ~~~ 88 (98)
T d1wf2a_ 86 AEP 88 (98)
T ss_dssp TSC
T ss_pred CCC
Confidence 653
No 106
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=7.9e-17 Score=129.05 Aligned_cols=76 Identities=28% Similarity=0.494 Sum_probs=71.8
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
..++|||+||+.++++++|+++|+.||.|.+|++.++ +|||||+|.+.++|.+|+..|||..|.|+.|+|.|+++
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~-----kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~ 91 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 91 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec-----ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 4568999999999999999999999999999999986 89999999999999999999999999999999999876
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
+
T Consensus 92 ~ 92 (96)
T d1x4ga1 92 S 92 (96)
T ss_dssp C
T ss_pred C
Confidence 4
No 107
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2.4e-17 Score=133.51 Aligned_cols=79 Identities=34% Similarity=0.631 Sum_probs=73.9
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
..++|||+|||.++|+++|+++|+.||.|.++.+..+.++.++|||||+|.+.++|.+|++.|||..|.|+++.|.+++
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~ 95 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTE 95 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCC
Confidence 3468999999999999999999999999999999998889999999999999999999999999999999988887654
No 108
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.5e-16 Score=124.49 Aligned_cols=77 Identities=23% Similarity=0.342 Sum_probs=72.7
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
.++|||+|||.++|+++|+++|+.||.|.+|++.++.+|.++|||||+|.+.++|.+|+ .+++..+.|+.|.|.+..
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al-~~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFV-ETPGQKYKETDLLILFKD 82 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHH-TCCCCEETTEECEEEEGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHH-HHCCCEECCEEEEEEEcC
Confidence 34899999999999999999999999999999999989999999999999999999999 579999999999999864
No 109
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.9e-17 Score=133.50 Aligned_cols=83 Identities=24% Similarity=0.284 Sum_probs=73.9
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeE-EEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~-v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...++|||+|||+++|+++|+++|+.||.|.. +.+..+.+|+++|||||+|.++++|.+|++ +|++.|.|+.|.|.++
T Consensus 6 ~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 6 SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVV 84 (103)
T ss_dssp SCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEE
T ss_pred CCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEEC
Confidence 45677999999999999999999999999876 555566899999999999999999999996 8999999999999988
Q ss_pred ccchh
Q 012034 105 QKKSE 109 (472)
Q Consensus 105 ~~~~~ 109 (472)
..+..
T Consensus 85 ~~~~~ 89 (103)
T d2cpya1 85 TLEDM 89 (103)
T ss_dssp CHHHH
T ss_pred CHHHh
Confidence 65443
No 110
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.6e-17 Score=125.58 Aligned_cols=74 Identities=20% Similarity=0.380 Sum_probs=68.7
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
.|||+|||+++|+++|+++|++||.|.+|+|+.++ ++.++|||||+|.+.++|.+|++ .++..++|+.|.|++|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 48999999999999999999999999999999885 68999999999999999999995 5778899999999865
No 111
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=3.7e-17 Score=128.85 Aligned_cols=77 Identities=18% Similarity=0.379 Sum_probs=67.1
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||.++|+++|+++|++|| +..+.+ ++++|||||+|.+.++|.+|++.||++.|.|+.|.|+++.
T Consensus 3 s~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~-----~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~ 76 (88)
T d1wg1a_ 3 SGSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV-----DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQP 76 (88)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE-----EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee-----eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 3567899999999999999999999999 233333 3568999999999999999999999999999999999986
Q ss_pred cch
Q 012034 106 KKS 108 (472)
Q Consensus 106 ~~~ 108 (472)
.+.
T Consensus 77 ~~~ 79 (88)
T d1wg1a_ 77 TDA 79 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 112
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.9e-16 Score=122.04 Aligned_cols=75 Identities=19% Similarity=0.426 Sum_probs=69.9
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
.+|||+|||+++|+++|+++|++||.|..+.+..++ ++.++|||||+|.+.++|.+|+ .++|..|+|+.|.|+.|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEEC
Confidence 479999999999999999999999999999998875 6789999999999999999988 58999999999999876
No 113
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.1e-16 Score=141.62 Aligned_cols=107 Identities=25% Similarity=0.440 Sum_probs=92.8
Q ss_pred ccCeeEEEcCcccchhhhhhhccCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEEC-CCCCceeEEEEEeCCHHH
Q 012034 3 INDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADD 81 (472)
Q Consensus 3 ~~~k~v~v~~~~~~~~r~~~~~~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d-~~g~skG~aFV~F~~~e~ 81 (472)
+++..+.+.....+............++|||+|||.++|+++|+++|+.||.|..+.|+.| .+|+++|||||+|.+.++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~ 151 (183)
T d1u1qa_ 72 VDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDS 151 (183)
T ss_dssp ETTEECEEEECCCTTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHH
T ss_pred ccccchhhhhhhhcccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHH
Confidence 4566677777766666655555677899999999999999999999999999999999998 468999999999999999
Q ss_pred HHHHHHHHCCCccCCcceeeeccccchhH
Q 012034 82 AAKAVEALNGKKFDDREWYVGKAQKKSER 110 (472)
Q Consensus 82 A~~Av~~lng~~i~g~~l~V~~a~~~~~~ 110 (472)
|.+|++ ++++.+.|+.|.|.+|.++.++
T Consensus 152 A~~Al~-~~~~~~~G~~i~V~~A~~k~e~ 179 (183)
T d1u1qa_ 152 VDKIVI-QKYHTVNGHNCEVRKALSKQEM 179 (183)
T ss_dssp HHHHHT-SSCEEETTEEEEEEECCCHHHH
T ss_pred HHHHHH-hCCCeECCEEEEEEecCCcccc
Confidence 999997 7899999999999999877554
No 114
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=1.9e-16 Score=127.26 Aligned_cols=82 Identities=30% Similarity=0.539 Sum_probs=74.7
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhC------CcEecCeeE
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMN------GKMIVSKPL 202 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~------g~~i~gk~l 202 (472)
.+++|||+|||+++|+++|+++|++||.|.++.+..+. .+.++|||||+|.+.++|.+|++.+| |..+.|+.|
T Consensus 7 ~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l 86 (98)
T d1x4ha1 7 EGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQL 86 (98)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEE
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEE
Confidence 45789999999999999999999999999999998875 67799999999999999999999886 678899999
Q ss_pred EEEEcccHH
Q 012034 203 YVAVAQRKE 211 (472)
Q Consensus 203 ~V~~a~~k~ 211 (472)
.|.++..+.
T Consensus 87 ~v~~a~~k~ 95 (98)
T d1x4ha1 87 KVDLAVTRD 95 (98)
T ss_dssp EEECCCCCC
T ss_pred EEEECCCCC
Confidence 999987753
No 115
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.1e-16 Score=126.38 Aligned_cols=79 Identities=20% Similarity=0.326 Sum_probs=72.5
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
..+++|||+|||.++|+++|+++|+.||.|..+.+..+ +.++|||||+|.+.++|.+|++.|||..|.|++|.|.|++
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~--~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~ 89 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR--RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 89 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS--SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc--ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEecc
Confidence 34568999999999999999999999999999998665 4578999999999999999999999999999999999987
Q ss_pred c
Q 012034 209 R 209 (472)
Q Consensus 209 ~ 209 (472)
.
T Consensus 90 ~ 90 (95)
T d1x4aa1 90 S 90 (95)
T ss_dssp C
T ss_pred C
Confidence 5
No 116
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=1e-16 Score=122.31 Aligned_cols=74 Identities=22% Similarity=0.384 Sum_probs=69.4
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
.|||+|||.++|+++|+++|+.||.|..+.+..++ ++.++|||||+|.+.++|.+|++ +||+.|+|++|.|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 38999999999999999999999999999988875 67899999999999999999995 9999999999999875
No 117
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=1.4e-16 Score=121.53 Aligned_cols=72 Identities=19% Similarity=0.421 Sum_probs=64.5
Q ss_pred EEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccccch
Q 012034 31 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 108 (472)
Q Consensus 31 l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~~~~ 108 (472)
|||+|||.++|+++|+++|++|| +..+.+ ++++|||||+|.+.++|.+|++.||+..+.|+.|.|+++...+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~-----~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV-----DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE-----ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee-----cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999999999 444443 4568999999999999999999999999999999999997643
No 118
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.3e-16 Score=129.74 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=72.2
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEE-EECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV-MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i-~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
...+.|||+|||+++||++|+++|+.||.|..+.+ +.+.+++++|||||+|.++++|++|++ +|+..|.|+.|.|.++
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEEC
Confidence 45667999999999999999999999999887544 445789999999999999999999996 8999999999999988
Q ss_pred ccc
Q 012034 105 QKK 107 (472)
Q Consensus 105 ~~~ 107 (472)
..+
T Consensus 92 ~~~ 94 (104)
T d1wg5a_ 92 SRA 94 (104)
T ss_dssp CTT
T ss_pred CHH
Confidence 654
No 119
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=1.2e-16 Score=125.39 Aligned_cols=75 Identities=28% Similarity=0.449 Sum_probs=70.8
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
.++|||+|||.++++++|+++|+.||.|.+|++.++ +|||||+|.+.++|.+|++.|||..|.|+.|+|+||..+
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~-----k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~ 82 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHS 82 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT-----TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCc
Confidence 457999999999999999999999999999999876 789999999999999999999999999999999998754
No 120
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=1.9e-16 Score=127.10 Aligned_cols=77 Identities=21% Similarity=0.375 Sum_probs=70.1
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCC--cceeeec
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDD--REWYVGK 103 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g--~~l~V~~ 103 (472)
...++|||+|||.++|+++|+++|++||.|.++.+.++ ++||||+|.+.++|.+|++.||+..|.| ++|.|.|
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~-----~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ 89 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG-----DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDF 89 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS-----SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc-----ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEe
Confidence 45689999999999999999999999999999998754 7899999999999999999999999987 4799999
Q ss_pred cccc
Q 012034 104 AQKK 107 (472)
Q Consensus 104 a~~~ 107 (472)
++..
T Consensus 90 ak~~ 93 (97)
T d1whya_ 90 AKSG 93 (97)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8753
No 121
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=2.7e-17 Score=129.71 Aligned_cols=77 Identities=19% Similarity=0.373 Sum_probs=69.3
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||+++|+++|+++|++||.|.+|.+.. .++|||||+|++.++|++|+. +++.|+|+.|.|.++.
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~----~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~ 76 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK----PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAE 76 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS----SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee----ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCC
Confidence 4578999999999999999999999999999987653 468999999999999999995 7889999999999987
Q ss_pred cch
Q 012034 106 KKS 108 (472)
Q Consensus 106 ~~~ 108 (472)
.+.
T Consensus 77 ~k~ 79 (88)
T d1wf0a_ 77 PKH 79 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 122
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.9e-16 Score=128.03 Aligned_cols=82 Identities=26% Similarity=0.472 Sum_probs=72.9
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceE--------EEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecC
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTIT--------SCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVS 199 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~--------~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~g 199 (472)
...++|||+|||.++|+++|+++|+.||.|. .+.+..+. +|.++|||||+|.+.++|.+|++.|||..|.|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 3567999999999999999999999999885 34555553 58899999999999999999999999999999
Q ss_pred eeEEEEEcccH
Q 012034 200 KPLYVAVAQRK 210 (472)
Q Consensus 200 k~l~V~~a~~k 210 (472)
+.|+|++++.+
T Consensus 86 r~i~V~~a~~~ 96 (101)
T d2cpea1 86 SKLKVSLARKK 96 (101)
T ss_dssp EECEEECSSCC
T ss_pred EEEEEEEcCCC
Confidence 99999999765
No 123
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=1.2e-16 Score=128.42 Aligned_cols=77 Identities=25% Similarity=0.268 Sum_probs=70.5
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
...++|||+|||+++++++|+++|++||+|.++.+.. +|||||+|.+.++|++||+.||+..|.|+.|.|.++.
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIR 86 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEe
Confidence 4567899999999999999999999999999999864 5899999999999999999999999999999999876
Q ss_pred cch
Q 012034 106 KKS 108 (472)
Q Consensus 106 ~~~ 108 (472)
.+.
T Consensus 87 ~~~ 89 (98)
T d1wg4a_ 87 VYP 89 (98)
T ss_dssp EEC
T ss_pred cCC
Confidence 543
No 124
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.5e-16 Score=122.61 Aligned_cols=74 Identities=30% Similarity=0.491 Sum_probs=68.7
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
.+++|||+|++ +|+++|+++|++||.|.++++.++ +|||||+|.+.++|.+|++.|||..++|++|+|.|+++
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~-----~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~ 76 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP-----RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARK 76 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT-----TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCS
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC-----CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecC
Confidence 45689999985 899999999999999999999765 78999999999999999999999999999999999975
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
+
T Consensus 77 ~ 77 (79)
T d2bz2a1 77 Q 77 (79)
T ss_dssp S
T ss_pred C
Confidence 4
No 125
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.63 E-value=3.4e-16 Score=121.85 Aligned_cols=77 Identities=19% Similarity=0.367 Sum_probs=70.3
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEe-cCeeEEEEEc
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI-VSKPLYVAVA 207 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i-~gk~l~V~~a 207 (472)
..+++|||+|||.++|+++|+++|+.||.|.+++++++ .+|||||+|.+.++|..|++.|||..+ +|++|+|.|+
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~a 81 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFA 81 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEe
Confidence 34678999999999999999999999999999999875 478999999999999999999999988 4689999998
Q ss_pred cc
Q 012034 208 QR 209 (472)
Q Consensus 208 ~~ 209 (472)
+.
T Consensus 82 kk 83 (83)
T d2b0ga1 82 KK 83 (83)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 126
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=2.1e-16 Score=123.90 Aligned_cols=78 Identities=18% Similarity=0.360 Sum_probs=72.0
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEE-EEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITS-CKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~-v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
..+.|||+|||++++++||+++|+.||.|.. +.+..+.+|.++|+|||+|.+.++|.+|++.||+..+.|++|+|+++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3457999999999999999999999999876 56777788999999999999999999999999999999999999975
No 127
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=6e-17 Score=125.28 Aligned_cols=74 Identities=27% Similarity=0.430 Sum_probs=68.4
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCc-EecCeeEEEEEcccHH
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK-MIVSKPLYVAVAQRKE 211 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~-~i~gk~l~V~~a~~k~ 211 (472)
+|||+|||.++|+++|+++|++||.|.++++... +|||||+|.+.++|.+|++.|||. .++|++|+|.|+..+.
T Consensus 3 ~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-----rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~ 77 (80)
T d2cqha1 3 KLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK-----SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKK 77 (80)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE-----TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc-----cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcC
Confidence 6999999999999999999999999988777664 899999999999999999999996 6999999999998764
No 128
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.2e-16 Score=126.82 Aligned_cols=83 Identities=34% Similarity=0.522 Sum_probs=73.8
Q ss_pred cceeeeecCCCCccHHHHHH----HHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEE
Q 012034 131 GLNLYIKNLGDSIDDEKLKE----LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 206 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~----~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~ 206 (472)
+++|||+|||.++++++|++ +|+.||.|.+|++.. ++.++|||||+|.+.++|.+|++.+||..++|+.|+|.|
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~--~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ 80 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR--SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQY 80 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH--HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee--eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 46899999999999999864 589999999999865 366899999999999999999999999999999999999
Q ss_pred cccHHHHHH
Q 012034 207 AQRKEERRA 215 (472)
Q Consensus 207 a~~k~~~~~ 215 (472)
++.+.+...
T Consensus 81 ak~~~~~~~ 89 (91)
T d1nu4a_ 81 AKTDSDIIA 89 (91)
T ss_dssp CSSCCTHHH
T ss_pred eCCCchhhc
Confidence 988765443
No 129
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=2.9e-16 Score=123.85 Aligned_cols=76 Identities=22% Similarity=0.382 Sum_probs=68.3
Q ss_pred ccceeeeecCCCCccHHHH---HHHHhccCceEEEEEeeCCC----CCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeE
Q 012034 130 QGLNLYIKNLGDSIDDEKL---KELFSEFGTITSCKVMRDPS----GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 202 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L---~~~F~~~G~I~~v~i~~~~~----g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l 202 (472)
+..+|||+|||.++++++| +++|++||.|.+|.|++++. +..+|||||+|.+.++|.+|++.|||..++|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 4557999999999999999 67899999999999998852 2345999999999999999999999999999999
Q ss_pred EEE
Q 012034 203 YVA 205 (472)
Q Consensus 203 ~V~ 205 (472)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 130
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=2.4e-16 Score=129.70 Aligned_cols=76 Identities=24% Similarity=0.304 Sum_probs=70.4
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
..++|||+|||.++++++|+++|+.||.|.+|.|.. ++|||||+|.+.++|.+|++.|||..|.|++|+|.|+..
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~-----~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~ 83 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE-----GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPI 83 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS-----SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEET
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec-----cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCC
Confidence 346899999999999999999999999999998854 489999999999999999999999999999999999865
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
.
T Consensus 84 ~ 84 (111)
T d1whxa_ 84 G 84 (111)
T ss_dssp T
T ss_pred C
Confidence 4
No 131
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=3.3e-17 Score=132.89 Aligned_cols=83 Identities=27% Similarity=0.410 Sum_probs=76.5
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
.+++|||+|||.++++++|+++|+.||.|..+.+..+. +|.++|||||+|.+.++|.+|++.|||..|.|++|.|.|++
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 35689999999999999999999999999998887764 68899999999999999999999999999999999999998
Q ss_pred cHHH
Q 012034 209 RKEE 212 (472)
Q Consensus 209 ~k~~ 212 (472)
.+++
T Consensus 97 ~k~~ 100 (102)
T d2cpxa1 97 NKKQ 100 (102)
T ss_dssp CCSC
T ss_pred Cccc
Confidence 7653
No 132
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.4e-16 Score=122.58 Aligned_cols=79 Identities=13% Similarity=0.263 Sum_probs=71.2
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHH--CCCccCCcceeee
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL--NGKKFDDREWYVG 102 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~l--ng~~i~g~~l~V~ 102 (472)
....++|||+|||.++|+++|+++|++||.|.++.+.++ +|||||+|++.++|.+|++.+ ++..+.|+.|+|.
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~ 79 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG-----KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQ 79 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc-----ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEE
Confidence 357889999999999999999999999999999998865 689999999999999999865 5778999999999
Q ss_pred ccccch
Q 012034 103 KAQKKS 108 (472)
Q Consensus 103 ~a~~~~ 108 (472)
+++.+.
T Consensus 80 ~sk~~~ 85 (88)
T d2cq1a1 80 YSNHKE 85 (88)
T ss_dssp ECSCSS
T ss_pred ECCCCC
Confidence 987553
No 133
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.7e-16 Score=129.60 Aligned_cols=84 Identities=20% Similarity=0.237 Sum_probs=74.6
Q ss_pred cCCcceEEeCCCCCCCCHHHHHHHHhcCCCeeE-EEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeec
Q 012034 25 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 103 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~-v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~ 103 (472)
....++|||+|||+++|+++|+++|+.||.|.. +.+..+.+|+++|||||+|.+.++|.+|++ ||+..|+|+.|.|.+
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~ 93 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHP 93 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEE
Confidence 345678999999999999999999999999876 455566899999999999999999999996 899999999999998
Q ss_pred cccchh
Q 012034 104 AQKKSE 109 (472)
Q Consensus 104 a~~~~~ 109 (472)
+.....
T Consensus 94 ~~~~~~ 99 (112)
T d1wela1 94 ITKKGM 99 (112)
T ss_dssp ECHHHH
T ss_pred cChHHH
Confidence 876554
No 134
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=3.3e-16 Score=128.46 Aligned_cols=74 Identities=22% Similarity=0.459 Sum_probs=68.9
Q ss_pred cceeeeecCC-CCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 131 GLNLYIKNLG-DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 131 ~~~l~V~nL~-~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
+++|||+||+ ..+|+++|+++|+.||.|.+|+|+++ .+|||||+|.+.++|.+|++.|||..|.|+.|.|.|++
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~----~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFN----KKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCT----TSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEec----ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 3589999995 56999999999999999999999987 37899999999999999999999999999999999975
No 135
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=4.1e-16 Score=124.86 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=71.9
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCc-eEEEEEeeCC--CCCcccEEEEEcCCHHHHHHHHHHhCCc--EecCeeEEEEE
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGT-ITSCKVMRDP--SGISKGSGFVAFSTPEEASRALAEMNGK--MIVSKPLYVAV 206 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~-I~~v~i~~~~--~g~s~g~afV~f~s~~~A~~Ai~~l~g~--~i~gk~l~V~~ 206 (472)
|.|||+|||.++|+++|+++|+.||. |.+++++++. .++++|||||+|.+.++|.+|++.|++. .+.|++|.|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 67999999999999999999999995 9999998874 5789999999999999999999998754 45799999999
Q ss_pred cccHH
Q 012034 207 AQRKE 211 (472)
Q Consensus 207 a~~k~ 211 (472)
|..+.
T Consensus 82 A~p~~ 86 (96)
T d2disa1 82 AEPEI 86 (96)
T ss_dssp SCSSC
T ss_pred cCCCC
Confidence 97653
No 136
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=2.9e-16 Score=126.48 Aligned_cols=78 Identities=26% Similarity=0.318 Sum_probs=70.6
Q ss_pred CCcceEEeCCCCCC-CCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHH--HHCCCccCCcceeee
Q 012034 26 TKFNNVFVKNLDES-TTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE--ALNGKKFDDREWYVG 102 (472)
Q Consensus 26 ~~~~~l~V~nLp~~-~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~--~lng~~i~g~~l~V~ 102 (472)
...++|||+|||.+ +|+++|+++|++||.|.++.++++ +|||||+|++.++|.+|++ .+++..+.|+.|.|.
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~-----k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~ 90 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM-----KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVD 90 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT-----TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEE
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec-----CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEE
Confidence 55689999999985 899999999999999999999865 6899999999999999998 578889999999999
Q ss_pred ccccch
Q 012034 103 KAQKKS 108 (472)
Q Consensus 103 ~a~~~~ 108 (472)
+++++.
T Consensus 91 ~s~~~~ 96 (99)
T d1x4fa1 91 LSEKYK 96 (99)
T ss_dssp EECSCS
T ss_pred EcCCcc
Confidence 997654
No 137
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.61 E-value=1.2e-15 Score=116.29 Aligned_cols=74 Identities=19% Similarity=0.220 Sum_probs=68.3
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
++|||+|||.++++++|+++|+.||.|.++++..++++. ++||||+|.+.++|.+|+ .+|++.|+|+.|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~-~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKN-FRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSS-SEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecccc-ceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 479999999999999999999999999999999887654 579999999999999998 58999999999999854
No 138
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=5.4e-16 Score=124.57 Aligned_cols=73 Identities=29% Similarity=0.546 Sum_probs=67.2
Q ss_pred ccceeeeecCC-CCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLG-DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~-~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
..++|||+||+ +.+++++|+++|++||.|.+++| ++|||||+|.+.++|.+|++.|||..|.|++|+|.|+.
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i-------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 86 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV-------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAA 86 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE-------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETT
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE-------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 34679999996 67888999999999999999998 37899999999999999999999999999999999986
Q ss_pred c
Q 012034 209 R 209 (472)
Q Consensus 209 ~ 209 (472)
.
T Consensus 87 ~ 87 (98)
T d1wf2a_ 87 E 87 (98)
T ss_dssp S
T ss_pred C
Confidence 4
No 139
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=6.9e-16 Score=125.20 Aligned_cols=83 Identities=18% Similarity=0.280 Sum_probs=73.9
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEE-EEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITS-CKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~-v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
.++|||+|||+++|+++|+++|+.||.|.. +.+..+.+|.++|||||+|.+.++|.+|++ +|+..|+|+.|.|.++..
T Consensus 8 ~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 8 KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp CCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred ceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 457999999999999999999999999876 556666789999999999999999999995 999999999999999876
Q ss_pred HHHHH
Q 012034 210 KEERR 214 (472)
Q Consensus 210 k~~~~ 214 (472)
++.+.
T Consensus 87 ~~~~~ 91 (103)
T d2cpya1 87 EDMRE 91 (103)
T ss_dssp HHHHH
T ss_pred HHhhh
Confidence 65543
No 140
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.8e-16 Score=119.91 Aligned_cols=70 Identities=30% Similarity=0.525 Sum_probs=66.0
Q ss_pred eeeecCCCCccHHHHHHHHhccCceEEEEEeeCC-CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEE
Q 012034 134 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 203 (472)
Q Consensus 134 l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~-~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~ 203 (472)
|||+|||.++|+++|+++|+.||.|..+++.+++ ++.++|||||+|.+.++|.+|++.|||..|+|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 7999999999999999999999999999998875 688999999999999999999999999999998763
No 141
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=1.2e-15 Score=123.90 Aligned_cols=77 Identities=26% Similarity=0.300 Sum_probs=69.6
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHH--CCCccCCcceeeec
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL--NGKKFDDREWYVGK 103 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~l--ng~~i~g~~l~V~~ 103 (472)
...++|||+|||.++||++|+++|++||.|.++.+.++ ||||||+|++.++|++|++.+ ++..+.|+.|+|.+
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~-----k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~ 87 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF-----KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNY 87 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec-----ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEE
Confidence 45788999999999999999999999999999998754 789999999999999999987 45678999999999
Q ss_pred cccc
Q 012034 104 AQKK 107 (472)
Q Consensus 104 a~~~ 107 (472)
+..+
T Consensus 88 s~~~ 91 (104)
T d1wexa_ 88 STSK 91 (104)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 8654
No 142
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.3e-15 Score=119.23 Aligned_cols=75 Identities=28% Similarity=0.408 Sum_probs=69.3
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
..+|||+|||.++|+++|+++|+.||.|..+.+.. ++|||||+|.+.++|.+|+..|||..|.|+.|.|.|++++
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~-----~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~ 82 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK-----IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPV 82 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE-----CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc-----ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCC
Confidence 35799999999999999999999999998888754 4899999999999999999999999999999999998754
No 143
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.1e-15 Score=120.30 Aligned_cols=77 Identities=22% Similarity=0.323 Sum_probs=69.5
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEe-cCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI-VSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i-~gk~l~V~~a~ 208 (472)
.+++|||+|||.++|+++|+++|+.||.|.++.+..+ .++|||||+|.+.++|.+|+..|||..+ +|++|+|+|++
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~---~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk 85 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ---KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK 85 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS---SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECS
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee---cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCC
Confidence 3568999999999999999999999999988877654 4578999999999999999999999988 58999999987
Q ss_pred c
Q 012034 209 R 209 (472)
Q Consensus 209 ~ 209 (472)
.
T Consensus 86 ~ 86 (88)
T d2adca2 86 S 86 (88)
T ss_dssp S
T ss_pred C
Confidence 5
No 144
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.1e-15 Score=120.34 Aligned_cols=74 Identities=20% Similarity=0.350 Sum_probs=65.4
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
.++|||+|||.+++++||+++|++|| +..+.+. .++|||||+|.+.++|.+|++.||+..+.|++|.|+++..+
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~~-----~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~ 78 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYVD-----RNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTD 78 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEEE-----GGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeeee-----ccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 35899999999999999999999999 3334443 35899999999999999999999999999999999998654
No 145
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=5.3e-17 Score=131.93 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=73.9
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
..++++|+++..+++|++|+++|++||+|.+|.|.++.+|+++|||||+|++.++|.+|++.|||+.++|+.|.|+++
T Consensus 26 ~~~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 26 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred ccchHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 346799999999999999999999999999999998899999999999999999999999999999999999999875
No 146
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.59 E-value=8.8e-16 Score=122.90 Aligned_cols=77 Identities=27% Similarity=0.402 Sum_probs=70.4
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
.++|||+||+.++|+++|+++|+.||.|..++. ++.++|||||+|.+.++|.+|++.|||..|+|++|+|.|+..+
T Consensus 16 ~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k 91 (96)
T d1fjca_ 16 ARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 91 (96)
T ss_dssp GGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcccceeeee----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCC
Confidence 468999999999999999999999998876653 4678999999999999999999999999999999999999876
Q ss_pred H
Q 012034 211 E 211 (472)
Q Consensus 211 ~ 211 (472)
.
T Consensus 92 ~ 92 (96)
T d1fjca_ 92 G 92 (96)
T ss_dssp C
T ss_pred C
Confidence 3
No 147
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.4e-15 Score=123.56 Aligned_cols=79 Identities=25% Similarity=0.450 Sum_probs=70.4
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC--CCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP--SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~--~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
..++|||+|||+++|+++|+++|+.|| |.+++++.+. ++.++|||||+|.+.++|.+|+ .+|+..|.|+.|+|.++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 457899999999999999999999999 7788777654 6789999999999999998666 69999999999999998
Q ss_pred ccH
Q 012034 208 QRK 210 (472)
Q Consensus 208 ~~k 210 (472)
..+
T Consensus 92 ~~~ 94 (104)
T d1wi8a_ 92 DQA 94 (104)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 148
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=3.1e-15 Score=113.91 Aligned_cols=71 Identities=21% Similarity=0.429 Sum_probs=64.4
Q ss_pred eeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 134 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 134 l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
|||+|||.++++++|+++|++|| +..+.+. +++|||||+|.+.++|.+|++.|||..++|++|.|+|+..+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~~-----~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFVD-----KYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEEE-----TTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceeec-----ccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 5555543 46899999999999999999999999999999999998754
No 149
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=7e-16 Score=121.41 Aligned_cols=74 Identities=16% Similarity=0.354 Sum_probs=67.5
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
.++|||+|||+++|+++|+++|++||.|.+|++..+ ++|||||+|.+.++|.+|+. ++..|+|++|.|.++..+
T Consensus 5 s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~----~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k 78 (88)
T d1wf0a_ 5 SSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKP----FRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPK 78 (88)
T ss_dssp CCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSS----CCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeec----cCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCC
Confidence 468999999999999999999999999999987654 68999999999999999985 788999999999998654
No 150
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.1e-15 Score=123.65 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=72.6
Q ss_pred cccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 129 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 129 ~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
..+.+|||+|||+++|+++|+++|+.|| +.++.++.+.++.++|||||+|.+.++|.+|++ +|+..|+|+.|.|.++.
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~ 90 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNS 90 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEEC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcC
Confidence 3456899999999999999999999997 557888888889999999999999999999985 89999999999999877
Q ss_pred cH
Q 012034 209 RK 210 (472)
Q Consensus 209 ~k 210 (472)
.+
T Consensus 91 ~~ 92 (102)
T d1weza_ 91 TA 92 (102)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 151
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=1.6e-15 Score=119.48 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=69.9
Q ss_pred cCCcceEEeCCCCCC-CCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHH--CCCccCCcceee
Q 012034 25 KTKFNNVFVKNLDES-TTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL--NGKKFDDREWYV 101 (472)
Q Consensus 25 ~~~~~~l~V~nLp~~-~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~l--ng~~i~g~~l~V 101 (472)
....++|||+|||.. +|+++|.++|++||.|.++.+..+ ++||||+|++.++|..|++.| ++..+.|+.|.|
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~-----k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V 79 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK-----INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRV 79 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS-----SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc-----ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEE
Confidence 356888999999986 789999999999999999999865 679999999999999999966 677899999999
Q ss_pred eccccc
Q 012034 102 GKAQKK 107 (472)
Q Consensus 102 ~~a~~~ 107 (472)
.++++.
T Consensus 80 ~~s~~~ 85 (89)
T d1x4da1 80 HLSQKY 85 (89)
T ss_dssp EEECCC
T ss_pred EECCCc
Confidence 998754
No 152
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=5.5e-15 Score=116.18 Aligned_cols=79 Identities=20% Similarity=0.333 Sum_probs=71.0
Q ss_pred ccccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHh--CCcEecCeeEEEE
Q 012034 128 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM--NGKMIVSKPLYVA 205 (472)
Q Consensus 128 ~~~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l--~g~~i~gk~l~V~ 205 (472)
...+++|||+|||.++++++|+++|+.||.|.++++.++ ++||||+|.+.++|.+|++.+ ++..+.|++|+|.
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~ 79 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG-----KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQ 79 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc-----ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEE
Confidence 345678999999999999999999999999999999865 689999999999999999865 5778999999999
Q ss_pred EcccHH
Q 012034 206 VAQRKE 211 (472)
Q Consensus 206 ~a~~k~ 211 (472)
|++.++
T Consensus 80 ~sk~~~ 85 (88)
T d2cq1a1 80 YSNHKE 85 (88)
T ss_dssp ECSCSS
T ss_pred ECCCCC
Confidence 997653
No 153
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.9e-15 Score=123.61 Aligned_cols=76 Identities=20% Similarity=0.354 Sum_probs=69.6
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEe--cCeeEEEEEccc
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI--VSKPLYVAVAQR 209 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i--~gk~l~V~~a~~ 209 (472)
.+|||+||++++|+++|+++|++||.|.+|.++.++ ++|||||+|.+.++|.+|+..|||..| .+++|.|.+++.
T Consensus 8 ~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~---~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~ 84 (108)
T d2adba1 8 LRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN---NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKL 84 (108)
T ss_dssp EEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET---TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSS
T ss_pred EEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC---CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCC
Confidence 479999999999999999999999999999998863 589999999999999999999999998 578899988865
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
+
T Consensus 85 ~ 85 (108)
T d2adba1 85 T 85 (108)
T ss_dssp C
T ss_pred c
Confidence 4
No 154
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1e-15 Score=120.14 Aligned_cols=72 Identities=25% Similarity=0.317 Sum_probs=66.9
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
.|||+|||.++|+++|+++|++||.|.++++..+ |||||+|.+.++|.+|++.|||..|.|+.|.|.++..+
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 5999999999999999999999999999998753 79999999999999999999999999999998877544
No 155
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=4.1e-15 Score=119.16 Aligned_cols=76 Identities=21% Similarity=0.358 Sum_probs=69.5
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecC--eeEEEEEc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS--KPLYVAVA 207 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~g--k~l~V~~a 207 (472)
..++|||+||+.++++++|+++|++||.|+.+++.++ ++||||+|.+.++|.+|++.||+..|.| ++|+|.|+
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~-----~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~a 90 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG-----DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFA 90 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS-----SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEEC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc-----ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeC
Confidence 3468999999999999999999999999999999875 7899999999999999999999999976 58999998
Q ss_pred ccH
Q 012034 208 QRK 210 (472)
Q Consensus 208 ~~k 210 (472)
+..
T Consensus 91 k~~ 93 (97)
T d1whya_ 91 KSG 93 (97)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 156
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=8e-17 Score=127.50 Aligned_cols=77 Identities=17% Similarity=0.344 Sum_probs=67.8
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEE------ECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeee
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM------RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVG 102 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~------~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~ 102 (472)
++|||+|||.++||++|+++|+.||.|.++.+. ...+++++|||||+|.+.|+|.+|++ |||..+.|+.|.|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 679999999999999999999999988766543 23467899999999999999999995 99999999999998
Q ss_pred cccc
Q 012034 103 KAQK 106 (472)
Q Consensus 103 ~a~~ 106 (472)
++..
T Consensus 81 r~k~ 84 (90)
T d1u2fa_ 81 RPHD 84 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7643
No 157
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=3.8e-15 Score=119.53 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=69.5
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEccc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 209 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~~ 209 (472)
...+|||+|||+++++++|+++|+.||.|++++|.+ +|||||+|.+.++|.+||+.|||..+.|+.|.|.+++.
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~ 87 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEec
Confidence 345799999999999999999999999999999864 58999999999999999999999999999999999865
Q ss_pred H
Q 012034 210 K 210 (472)
Q Consensus 210 k 210 (472)
+
T Consensus 88 ~ 88 (98)
T d1wg4a_ 88 Y 88 (98)
T ss_dssp E
T ss_pred C
Confidence 4
No 158
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.1e-15 Score=120.71 Aligned_cols=81 Identities=22% Similarity=0.292 Sum_probs=71.8
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEE-EEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSC-KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v-~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
...+|||+|||+++|+++|+++|+.||.|..+ .+..+.++.++|||||+|.+.++|.+|+ .+|+..|.|+.|.|.++.
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~-~~~~~~i~gR~i~V~~~~ 92 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKAL-KKHKERIGHRYIEIFKSS 92 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHH-TTTTCCSSSSCCEEEEEC
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHH-hhCCCEEcceEEEEEECC
Confidence 44579999999999999999999999988874 5555668899999999999999999999 499999999999999887
Q ss_pred cHH
Q 012034 209 RKE 211 (472)
Q Consensus 209 ~k~ 211 (472)
.++
T Consensus 93 ~~~ 95 (104)
T d1wg5a_ 93 RAE 95 (104)
T ss_dssp TTT
T ss_pred HHH
Confidence 653
No 159
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=9e-16 Score=124.52 Aligned_cols=75 Identities=17% Similarity=0.358 Sum_probs=72.1
Q ss_pred eeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 133 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
+++|+++.+++++++|+++|++||.|++|+|+++.+|+++|||||+|.+.++|.+|++.|||+.++|++|.|+|+
T Consensus 29 ~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 29 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred hHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 588899999999999999999999999999999889999999999999999999999999999999999999985
No 160
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=1.1e-15 Score=124.08 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=69.7
Q ss_pred CCcceEEeCCCCCCC-CH----HHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCccee
Q 012034 26 TKFNNVFVKNLDEST-TD----EDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 100 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~-te----e~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~ 100 (472)
...++|||+||+.++ ++ ++|+++|+.||.|.++.+++ ++|||||+|++.++|.+|++.|||..|.|+.|.
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k-----~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 77 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK-----SFKRVRINFSNPLSAADARLRLHKTEFLGKEMK 77 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET-----TTTEEEEECSSTTHHHHHHHTSTTSEETTEECE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec-----CCCEEEEEECCHHHHHHHHHHhcccccCCCEeE
Confidence 467899999999886 33 56999999999999999984 478999999999999999999999999999999
Q ss_pred eeccccch
Q 012034 101 VGKAQKKS 108 (472)
Q Consensus 101 V~~a~~~~ 108 (472)
|.|++...
T Consensus 78 v~~a~~~~ 85 (104)
T d1weya_ 78 LYFAQTLH 85 (104)
T ss_dssp EECCCCSS
T ss_pred EeecccCC
Confidence 99997554
No 161
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=9.4e-15 Score=120.37 Aligned_cols=89 Identities=22% Similarity=0.214 Sum_probs=75.7
Q ss_pred CCcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCH-HHHHHHHHHHCCCccCCcceeeecc
Q 012034 26 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA-DDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 26 ~~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~-e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
.....+||+|||.++|+++|+++|++||+|.+|.|+++ +|||||.|++. ++|..|+..+++..+.++.+.|.++
T Consensus 9 ~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~-----kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~ 83 (113)
T d1owxa_ 9 IGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG-----AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWE 83 (113)
T ss_dssp CCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT-----CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEE
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC-----CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEe
Confidence 34566799999999999999999999999999999865 79999999985 7899999999999999998888888
Q ss_pred ccchhHHHHHHHHHH
Q 012034 105 QKKSEREQELKGQFE 119 (472)
Q Consensus 105 ~~~~~~~~~~~~~~~ 119 (472)
..+.+.+.+...+..
T Consensus 84 ~~~~~~e~~~~~k~~ 98 (113)
T d1owxa_ 84 VLEGEVEKEALKKII 98 (113)
T ss_dssp ECCHHHHHHHHHHHH
T ss_pred eccchhhHHHHHHHH
Confidence 777666655444433
No 162
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=6.2e-15 Score=118.48 Aligned_cols=76 Identities=20% Similarity=0.293 Sum_probs=69.2
Q ss_pred ccceeeeecCCC-CccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHH--HhCCcEecCeeEEEEE
Q 012034 130 QGLNLYIKNLGD-SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA--EMNGKMIVSKPLYVAV 206 (472)
Q Consensus 130 ~~~~l~V~nL~~-~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~--~l~g~~i~gk~l~V~~ 206 (472)
.+++|||+|||. .+|+++|+++|+.||.|.++.++++ +|||||+|.+.++|.+|++ .+++..++|+.|+|.|
T Consensus 17 ~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~-----k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~ 91 (99)
T d1x4fa1 17 LGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM-----KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDL 91 (99)
T ss_dssp CCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT-----TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEE
T ss_pred CCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec-----CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEE
Confidence 456899999997 4899999999999999999999875 7899999999999999998 5788899999999999
Q ss_pred cccH
Q 012034 207 AQRK 210 (472)
Q Consensus 207 a~~k 210 (472)
++++
T Consensus 92 s~~~ 95 (99)
T d1x4fa1 92 SEKY 95 (99)
T ss_dssp ECSC
T ss_pred cCCc
Confidence 9765
No 163
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=2.2e-14 Score=116.31 Aligned_cols=76 Identities=20% Similarity=0.263 Sum_probs=69.1
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHh--CCcEecCeeEEEEEc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM--NGKMIVSKPLYVAVA 207 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l--~g~~i~gk~l~V~~a 207 (472)
.+.+|||+|||..+|+++|+++|+.||.|+++++.++ +++|||+|.+.++|..|++.+ ++..+.|++|+|.|+
T Consensus 14 ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~-----k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s 88 (104)
T d1wexa_ 14 VSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF-----KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYS 88 (104)
T ss_dssp CCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec-----ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEc
Confidence 4568999999999999999999999999999999865 789999999999999999987 456788999999998
Q ss_pred ccH
Q 012034 208 QRK 210 (472)
Q Consensus 208 ~~k 210 (472)
..+
T Consensus 89 ~~~ 91 (104)
T d1wexa_ 89 TSK 91 (104)
T ss_dssp SSS
T ss_pred CCC
Confidence 765
No 164
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.3e-14 Score=119.32 Aligned_cols=84 Identities=19% Similarity=0.368 Sum_probs=74.5
Q ss_pred ccceeeeecCCCCccHHHHHHHHhccCceEEE-EEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 130 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSC-KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v-~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
.+.+|||+|||+++|+++|+++|+.||.|..+ .+..+.+|.++|||||+|.+.++|.+|+ .+||..|+|+.|.|..+.
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al-~~~~~~i~gR~i~V~~~~ 95 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL-CRHKQYMGNRFIQVHPIT 95 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHH-TSCSBCSTTSCBEEEEEC
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHH-HcCCCcCCCEEEEEEEcC
Confidence 45689999999999999999999999998764 4556678999999999999999999999 599999999999999998
Q ss_pred cHHHHH
Q 012034 209 RKEERR 214 (472)
Q Consensus 209 ~k~~~~ 214 (472)
.++...
T Consensus 96 ~~~~~~ 101 (112)
T d1wela1 96 KKGMLE 101 (112)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 776543
No 165
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=9.7e-15 Score=118.31 Aligned_cols=76 Identities=20% Similarity=0.207 Sum_probs=67.9
Q ss_pred ccceeeeecCCCCccH-----HHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEE
Q 012034 130 QGLNLYIKNLGDSIDD-----EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 204 (472)
Q Consensus 130 ~~~~l~V~nL~~~~t~-----e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V 204 (472)
..++|||+||+.++.. ++|+++|+.||.|.++++++ +++||||+|.+.++|.+|++.|||..|+|++|+|
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k-----~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v 78 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK-----SFKRVRINFSNPLSAADARLRLHKTEFLGKEMKL 78 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET-----TTTEEEEECSSTTHHHHHHHTSTTSEETTEECEE
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec-----CCCEEEEEECCHHHHHHHHHHhcccccCCCEeEE
Confidence 3468999999988733 56899999999999999986 4889999999999999999999999999999999
Q ss_pred EEcccH
Q 012034 205 AVAQRK 210 (472)
Q Consensus 205 ~~a~~k 210 (472)
.|++.+
T Consensus 79 ~~a~~~ 84 (104)
T d1weya_ 79 YFAQTL 84 (104)
T ss_dssp ECCCCS
T ss_pred eecccC
Confidence 998644
No 166
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=3.3e-14 Score=111.77 Aligned_cols=76 Identities=20% Similarity=0.312 Sum_probs=68.2
Q ss_pred ccceeeeecCCCC-ccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHh--CCcEecCeeEEEEE
Q 012034 130 QGLNLYIKNLGDS-IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM--NGKMIVSKPLYVAV 206 (472)
Q Consensus 130 ~~~~l~V~nL~~~-~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l--~g~~i~gk~l~V~~ 206 (472)
.+.+|||+||+.. +|++||+++|+.||.|.++.++.+ +++|||+|++.++|..|++.+ ++..+.|++|+|.|
T Consensus 7 ~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~-----k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~ 81 (89)
T d1x4da1 7 TRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK-----INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHL 81 (89)
T ss_dssp CCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS-----SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEE
T ss_pred CCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc-----ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEE
Confidence 3457999999985 889999999999999999999876 679999999999999999965 67889999999999
Q ss_pred cccH
Q 012034 207 AQRK 210 (472)
Q Consensus 207 a~~k 210 (472)
+++.
T Consensus 82 s~~~ 85 (89)
T d1x4da1 82 SQKY 85 (89)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 8753
No 167
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=2.2e-14 Score=115.51 Aligned_cols=66 Identities=18% Similarity=0.383 Sum_probs=59.6
Q ss_pred cCCcceEEeCC--CCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccC
Q 012034 25 KTKFNNVFVKN--LDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD 95 (472)
Q Consensus 25 ~~~~~~l~V~n--Lp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~ 95 (472)
....++|||.| ||.++|+++|+++|++||.|.++.+..+ +|||||+|++.++|.+|+++|||+.+.
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~-----k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN-----KPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT-----CSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC-----ccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 45678899955 9999999999999999999999988765 789999999999999999999999873
No 168
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.8e-13 Score=112.53 Aligned_cols=74 Identities=23% Similarity=0.254 Sum_probs=65.1
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCH-HHHHHHHHHhCCcEecCeeEEEEEcccH
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP-EEASRALAEMNGKMIVSKPLYVAVAQRK 210 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~-~~A~~Ai~~l~g~~i~gk~l~V~~a~~k 210 (472)
..+||+||++++|+++|+++|++||.|.+|.|+++ +|||||+|.+. ++|..|+..+++..+.++.+.|.++..+
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~-----kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~~ 86 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG-----AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVLE 86 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT-----CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEECC
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC-----CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeecc
Confidence 34599999999999999999999999999999875 89999999985 7899999999999888777777766544
No 169
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=5.4e-15 Score=116.75 Aligned_cols=73 Identities=18% Similarity=0.338 Sum_probs=64.5
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeC------CCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEE
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 205 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~------~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~ 205 (472)
..|||+|||.++|+++|+++|+.||.|..+.+... ..+.++|||||+|.+.++|.+|+ .|||..+.|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEEC
Confidence 36999999999999999999999998877665432 35678999999999999999998 599999999999996
No 170
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=3.1e-13 Score=108.30 Aligned_cols=81 Identities=19% Similarity=0.320 Sum_probs=69.3
Q ss_pred cCCcceEEeCCC--CCCCC---------HHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCc
Q 012034 25 KTKFNNVFVKNL--DESTT---------DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 93 (472)
Q Consensus 25 ~~~~~~l~V~nL--p~~~t---------ee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~ 93 (472)
.+..++|+|+|+ |.++. +++|++.|++||.|.+|.+..+ +.+|||||+|++.++|.+|++.|||..
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~---~~~G~~fV~f~~~e~A~~A~~~lng~~ 81 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRW 81 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT---CTTCEEEEECSCHHHHHHHHHHSTTCE
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC---CCccEEEEEECCHHHHHHHHHHhCCcE
Confidence 356788999998 55432 3689999999999999988665 457999999999999999999999999
Q ss_pred cCCcceeeeccccch
Q 012034 94 FDDREWYVGKAQKKS 108 (472)
Q Consensus 94 i~g~~l~V~~a~~~~ 108 (472)
++|+.|.|.++..+.
T Consensus 82 ~~gr~i~v~~~~g~~ 96 (99)
T d2dita1 82 FGGRQITAQAWDGTT 96 (99)
T ss_dssp ETTEECEEEECCSCC
T ss_pred ECCEEEEEEEeCCcC
Confidence 999999999886554
No 171
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=5.7e-13 Score=107.08 Aligned_cols=64 Identities=27% Similarity=0.464 Sum_probs=58.0
Q ss_pred ccceeeeec--CCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEec
Q 012034 130 QGLNLYIKN--LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 198 (472)
Q Consensus 130 ~~~~l~V~n--L~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~ 198 (472)
...+|||.| |+.++|+++|+++|++||.|+++.+..+ ++||||+|.+.++|.+|+..|||+.+.
T Consensus 17 pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~-----k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 17 ATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN-----KPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp CCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT-----CSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred CCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC-----ccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 345788865 9999999999999999999999998875 789999999999999999999999873
No 172
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=4.8e-13 Score=102.86 Aligned_cols=74 Identities=20% Similarity=0.244 Sum_probs=63.1
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcc-eeeecccc
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE-WYVGKAQK 106 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~-l~V~~a~~ 106 (472)
.+.|+|.+||.+++++.| +.|++||+|.++.+. +++|||||+|.+.++|++||+ +||..|+|+. |.|..+..
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~-----~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS-----NTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC-----SSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEec-----CCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCC
Confidence 466999999999987655 579999999998764 457999999999999999996 8999999985 67888876
Q ss_pred ch
Q 012034 107 KS 108 (472)
Q Consensus 107 ~~ 108 (472)
+.
T Consensus 77 k~ 78 (81)
T d1wwha1 77 KN 78 (81)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 173
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=3e-12 Score=102.44 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=67.1
Q ss_pred ccceeeeecC--CCCc---------cHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEec
Q 012034 130 QGLNLYIKNL--GDSI---------DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 198 (472)
Q Consensus 130 ~~~~l~V~nL--~~~~---------t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~ 198 (472)
.+.+|+|+|+ +.++ .++||++.|++||.|..+++..+ ..+|||||+|.+.++|.+|+..|||+.++
T Consensus 7 ~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~---~~~G~~fV~f~~~e~A~~A~~~lng~~~~ 83 (99)
T d2dita1 7 HERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFG 83 (99)
T ss_dssp SCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT---CTTCEEEEECSCHHHHHHHHHHSTTCEET
T ss_pred CccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC---CCccEEEEEECCHHHHHHHHHHhCCcEEC
Confidence 3458999998 4432 23789999999999999998765 46899999999999999999999999999
Q ss_pred CeeEEEEEcccH
Q 012034 199 SKPLYVAVAQRK 210 (472)
Q Consensus 199 gk~l~V~~a~~k 210 (472)
|++|.|.++..+
T Consensus 84 gr~i~v~~~~g~ 95 (99)
T d2dita1 84 GRQITAQAWDGT 95 (99)
T ss_dssp TEECEEEECCSC
T ss_pred CEEEEEEEeCCc
Confidence 999999998654
No 174
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.24 E-value=1.1e-11 Score=95.09 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=64.0
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCee-EEEEEccc
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP-LYVAVAQR 209 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~-l~V~~a~~ 209 (472)
.+-|+|.++|.+.+++.| ++|++||.|.++++.++ +|||||+|.+.++|.+|+ .+||..++|+. |.|..+..
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~~-----~~~~fV~f~~~~~A~~Al-~~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSNT-----GNWMHIRYQSKLQARKAL-SKDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECSS-----SSEEEEEESSHHHHHHHH-TTTTCEETTTEECEEEECCC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEecCC-----CCEEEEEEcccHHHHHHH-hcCCCeECCcEEEEEEeCCC
Confidence 346999999999987655 57999999999988653 799999999999999999 59999999974 67888877
Q ss_pred HHH
Q 012034 210 KEE 212 (472)
Q Consensus 210 k~~ 212 (472)
|..
T Consensus 77 k~~ 79 (81)
T d1wwha1 77 KNV 79 (81)
T ss_dssp HHH
T ss_pred hhh
Confidence 653
No 175
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=3.6e-12 Score=102.94 Aligned_cols=80 Identities=25% Similarity=0.295 Sum_probs=68.4
Q ss_pred CcceEEeCCC--CCCCC--------HHHHHHHHhcCCCeeEEEEEECCC---CCceeEEEEEeCCHHHHHHHHHHHCCCc
Q 012034 27 KFNNVFVKNL--DESTT--------DEDLKKIFGEYGTITSAVVMRDGD---GKSKCFGFVNFENADDAAKAVEALNGKK 93 (472)
Q Consensus 27 ~~~~l~V~nL--p~~~t--------ee~L~~~F~~fG~I~~v~i~~d~~---g~skG~aFV~F~~~e~A~~Av~~lng~~ 93 (472)
..+.|.|+|+ +.++. .++|++.|++||.|.+|.|.++.. ..++|++||+|.+.++|.+|++.|||..
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 4677999999 55543 357899999999999999988643 3457999999999999999999999999
Q ss_pred cCCcceeeecccc
Q 012034 94 FDDREWYVGKAQK 106 (472)
Q Consensus 94 i~g~~l~V~~a~~ 106 (472)
++||.|.|.+...
T Consensus 83 f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 83 FANRVVVTKYCDP 95 (104)
T ss_dssp SSSSCCEEEEECH
T ss_pred ECCeEEEEEEcCH
Confidence 9999999999864
No 176
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=7.1e-12 Score=101.14 Aligned_cols=81 Identities=17% Similarity=0.316 Sum_probs=68.6
Q ss_pred cceeeeecC--CCCc--------cHHHHHHHHhccCceEEEEEeeCCCC---CcccEEEEEcCCHHHHHHHHHHhCCcEe
Q 012034 131 GLNLYIKNL--GDSI--------DDEKLKELFSEFGTITSCKVMRDPSG---ISKGSGFVAFSTPEEASRALAEMNGKMI 197 (472)
Q Consensus 131 ~~~l~V~nL--~~~~--------t~e~L~~~F~~~G~I~~v~i~~~~~g---~s~g~afV~f~s~~~A~~Ai~~l~g~~i 197 (472)
+..|.|.|+ +.++ ..+||++.|++||.|++|.|.++.++ ...|++||.|.+.++|.+|+..|||+.+
T Consensus 4 s~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~f 83 (104)
T d1o0pa_ 4 TEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKF 83 (104)
T ss_dssp CSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCCS
T ss_pred CcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCEE
Confidence 457888998 4443 23689999999999999999887543 3568999999999999999999999999
Q ss_pred cCeeEEEEEcccHH
Q 012034 198 VSKPLYVAVAQRKE 211 (472)
Q Consensus 198 ~gk~l~V~~a~~k~ 211 (472)
+||.|.|.++....
T Consensus 84 ~gR~v~v~f~~~~~ 97 (104)
T d1o0pa_ 84 ANRVVVTKYCDPDS 97 (104)
T ss_dssp SSSCCEEEEECHHH
T ss_pred CCeEEEEEEcCHHH
Confidence 99999999987543
No 177
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=0.00014 Score=51.73 Aligned_cols=61 Identities=21% Similarity=0.276 Sum_probs=54.3
Q ss_pred HHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEcc
Q 012034 146 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 208 (472)
Q Consensus 146 e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a~ 208 (472)
+.|.+.|+++|.|.++.+....+|.. .|-|...+.++|.-|+..||.+.|++|+|.|+++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~~--~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQL--KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTTC--CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCcE--EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 45667899999999999988766665 48999999999999999999999999999999874
No 178
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.28 E-value=0.00049 Score=52.15 Aligned_cols=69 Identities=17% Similarity=0.259 Sum_probs=57.9
Q ss_pred cceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCC--C-CceeEEEEEeCCHHHHHHHHHHHCCCccCC
Q 012034 28 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD--G-KSKCFGFVNFENADDAAKAVEALNGKKFDD 96 (472)
Q Consensus 28 ~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~--g-~skG~aFV~F~~~e~A~~Av~~lng~~i~g 96 (472)
.|+|.|++||..+||+++.+.++..|++........+. + ..-.-|||.|.+.++.....+.++|+.+-+
T Consensus 1 ~tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 1 LSKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CCEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred CceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 37899999999999999999999999988777776531 2 123579999999999999999999998754
No 179
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.05 E-value=0.0007 Score=48.05 Aligned_cols=60 Identities=27% Similarity=0.296 Sum_probs=52.3
Q ss_pred HHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeeccc
Q 012034 44 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 105 (472)
Q Consensus 44 ~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a~ 105 (472)
.|.+.|+++|.|.++.+..-.+|.. .|-|...+.++|..|+..|+...|++++|.|..+.
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~dg~~--~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHTDYQL--KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCCSTTC--CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHhheeEEEEEEEeccCCcE--EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 4456899999999999987666654 68899999999999999999999999999998764
No 180
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.87 E-value=0.00058 Score=50.99 Aligned_cols=54 Identities=22% Similarity=0.415 Sum_probs=48.1
Q ss_pred HHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHCCCccCCcceeeecc
Q 012034 43 EDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 104 (472)
Q Consensus 43 e~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~lng~~i~g~~l~V~~a 104 (472)
.+|.+.|+.||+|.-|++..| -..|+|.+-++|.+|++ +++..+.|+.|.|.-.
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d-------~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~ 92 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG-------QMLVTFADSHSALSVLD-VDGMKVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT-------EEEEECSCSHHHHHHHH-GGGSEETTEEEEEECC
T ss_pred HHHHHHHhhCCeEEEEEEeCC-------eEEEEECCcHHHHHHhc-cCCeEEcceEEEEecC
Confidence 467788999999999999877 68999999999999996 8999999999998753
No 181
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.79 E-value=0.0011 Score=49.44 Aligned_cols=54 Identities=17% Similarity=0.372 Sum_probs=48.6
Q ss_pred HHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCCcEecCeeEEEEEc
Q 012034 146 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 207 (472)
Q Consensus 146 e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g~~i~gk~l~V~~a 207 (472)
.+|.+.|+.||+|.=+++..+ -.+|+|.+-++|-+|+ .++|..+.|+.|.|+..
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d-------~mwVTF~dG~SAL~al-~l~g~~v~G~~l~It~~ 92 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG-------QMLVTFADSHSALSVL-DVDGMKVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT-------EEEEECSCSHHHHHHH-HGGGSEETTEEEEEECC
T ss_pred HHHHHHHhhCCeEEEEEEeCC-------eEEEEECCcHHHHHHh-ccCCeEEcceEEEEecC
Confidence 577889999999999999876 6899999999999998 79999999999999853
No 182
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.48 E-value=0.0052 Score=46.28 Aligned_cols=68 Identities=12% Similarity=0.201 Sum_probs=56.6
Q ss_pred ceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCC--CC-CcccEEEEEcCCHHHHHHHHHHhCCcEecC
Q 012034 132 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP--SG-ISKGSGFVAFSTPEEASRALAEMNGKMIVS 199 (472)
Q Consensus 132 ~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~--~g-~s~g~afV~f~s~~~A~~Ai~~l~g~~i~g 199 (472)
++|.|++||..+|++++.+.++..|.+........+ .+ ..-.-|+|.|.+.++.....+..+|+.+.+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 468999999999999999999999999887766543 11 223569999999999999999999998743
No 183
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.03 E-value=0.023 Score=42.80 Aligned_cols=57 Identities=21% Similarity=0.372 Sum_probs=47.5
Q ss_pred CcceEEeCCCCCCCCHHHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHC
Q 012034 27 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 90 (472)
Q Consensus 27 ~~~~l~V~nLp~~~tee~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~ln 90 (472)
.-..||.-.+|+.|...||.++|+.||.|.--+| .| + -|||...+.|+|+.++..++
T Consensus 14 ~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd-T-----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 14 KRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD-T-----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET-T-----EEEEECSCHHHHHHHHHHHH
T ss_pred CcceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC-c-----eEEEEecCHHHHHHHHHHhc
Confidence 3455999999999999999999999999875555 43 2 69999999999999987643
No 184
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.02 E-value=0.54 Score=35.09 Aligned_cols=56 Identities=27% Similarity=0.380 Sum_probs=44.8
Q ss_pred cceeeeecCCCCccHHHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhC
Q 012034 131 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 193 (472)
Q Consensus 131 ~~~l~V~nL~~~~t~e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~ 193 (472)
...+|.-..|..+...||.++|+.||.|.---| .| --|||...+.++|..++..++
T Consensus 15 RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd------TSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD------TSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET------TEEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC------ceEEEEecCHHHHHHHHHHhc
Confidence 346899999999999999999999998753333 33 169999999999888876544
No 185
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=59.09 E-value=4.7 Score=28.69 Aligned_cols=54 Identities=20% Similarity=0.315 Sum_probs=40.5
Q ss_pred ceEEeCCCCCCCCHHHHHHHHhc-CC-CeeEEEEEECCCCCceeEEEEEeCCHHHHHH
Q 012034 29 NNVFVKNLDESTTDEDLKKIFGE-YG-TITSAVVMRDGDGKSKCFGFVNFENADDAAK 84 (472)
Q Consensus 29 ~~l~V~nLp~~~tee~L~~~F~~-fG-~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~ 84 (472)
.|-|+-.++.+.+..+|++.++. || .|..|..+....|. --|||.+...++|..
T Consensus 21 ~n~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~--KkA~V~L~~~~~a~d 76 (81)
T d1vqos1 21 QNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGE--KKAVVRLSEDDDAQE 76 (81)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSS--EEEEEEECTTSCHHH
T ss_pred CCEEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCc--EEEEEEeCCCCcHHH
Confidence 35666677799999999999987 66 67788877765443 369999987766554
No 186
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=57.88 E-value=3.3 Score=30.93 Aligned_cols=52 Identities=17% Similarity=0.296 Sum_probs=32.6
Q ss_pred CCCCCCCCHHHHHHHHhc-CCCeeEEEEEEC-----CCCCceeEEEEEeCCHHHHHHHH
Q 012034 34 KNLDESTTDEDLKKIFGE-YGTITSAVVMRD-----GDGKSKCFGFVNFENADDAAKAV 86 (472)
Q Consensus 34 ~nLp~~~tee~L~~~F~~-fG~I~~v~i~~d-----~~g~skG~aFV~F~~~e~A~~Av 86 (472)
.......+..+|++.+.+ ||.-.++.++.+ ..+++.|||+| |.|.+.|++.-
T Consensus 24 ~h~g~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~k~~E 81 (101)
T d1xn9a_ 24 KYEGSTPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAKL-YEDADRMKQVE 81 (101)
T ss_dssp ECSSSCCCHHHHHHHHHHHTTCCTTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHhHCcCcCEEEEEcCcccCCCceEEEEEEE-ECCHHHHHhhC
Confidence 333357888888887754 664333333332 34678888888 78877776543
No 187
>d2v94a1 d.12.1.3 (A:1-93) Ribosomal protein S24e {Pyrococcus abyssi [TaxId: 29292]}
Probab=55.57 E-value=4.6 Score=29.58 Aligned_cols=46 Identities=17% Similarity=0.188 Sum_probs=29.0
Q ss_pred CCCCHHHHHHHHhc-CCCeeEEEEEEC-----CCCCceeEEEEEeCCHHHHHH
Q 012034 38 ESTTDEDLKKIFGE-YGTITSAVVMRD-----GDGKSKCFGFVNFENADDAAK 84 (472)
Q Consensus 38 ~~~tee~L~~~F~~-fG~I~~v~i~~d-----~~g~skG~aFV~F~~~e~A~~ 84 (472)
...+..+|++.+.+ +|.=.+..++.+ ..|++.|||+| |.|.|+|++
T Consensus 29 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 80 (93)
T d2v94a1 29 PTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKSKGYAKY-YYDKDRMLY 80 (93)
T ss_dssp CCCCHHHHHHHHHHHHTCCGGGEEEEEEECCTTCSEEEEEEEE-ESSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEEeCccCCCCceEEEEEEE-ECCHHHHHh
Confidence 57788888876553 553333333333 24677888887 788887764
No 188
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=55.06 E-value=3.5 Score=30.80 Aligned_cols=46 Identities=11% Similarity=0.221 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHhc-CCCeeEEEEEEC-----CCCCceeEEEEEeCCHHHHHH
Q 012034 38 ESTTDEDLKKIFGE-YGTITSAVVMRD-----GDGKSKCFGFVNFENADDAAK 84 (472)
Q Consensus 38 ~~~tee~L~~~F~~-fG~I~~v~i~~d-----~~g~skG~aFV~F~~~e~A~~ 84 (472)
...+..+|++.+.+ ||.=.+..++.+ ..|++.|||+| |.|.+.|++
T Consensus 28 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 79 (102)
T d1ywxa1 28 ATPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKI-YNDEKAMAT 79 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEE-ECCHHHHHh
Confidence 56788888887754 553222222222 35678899888 888888764
No 189
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma acidophilum [TaxId: 2303]}
Probab=39.40 E-value=4.9 Score=29.72 Aligned_cols=46 Identities=11% Similarity=0.278 Sum_probs=29.3
Q ss_pred CCCCHHHHHHHHhc-CCCeeEEEEEEC-C----CCCceeEEEEEeCCHHHHHH
Q 012034 38 ESTTDEDLKKIFGE-YGTITSAVVMRD-G----DGKSKCFGFVNFENADDAAK 84 (472)
Q Consensus 38 ~~~tee~L~~~F~~-fG~I~~v~i~~d-~----~g~skG~aFV~F~~~e~A~~ 84 (472)
...+..+|++.+.+ ||.-.+..++.+ . .|++.|||+| |.|.|.|++
T Consensus 29 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 80 (98)
T d2g1da1 29 RTPSREEIKELIAKHEGVDKELVIVDNNKQLTGKHEIEGYTKI-YADKPSAML 80 (98)
T ss_dssp SCCCHHHHHHHHHHHHHSCSTTEECCCCCCCSSSSEEEEEEEE-ESHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCcCEEEEEcCEecCCCceEEEEEEE-ECCHHHHHh
Confidence 47788888887764 554334444444 2 3678888888 667666653
No 190
>d1b0xa_ a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.62 E-value=27 Score=23.47 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=33.3
Q ss_pred chhhhHh--hcCCChHHHHHhhCChHHHHHHHHHHHHHHHHHHHhh
Q 012034 410 AAKVTGM--LLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 453 (472)
Q Consensus 410 a~kitgm--ll~~~~~e~~~~~~~~~~l~~~v~~a~~~l~~~~~~~ 453 (472)
...|+|+ |++++.++|..|==....-+.||-.|+..|+.+..+.
T Consensus 25 ~~~~~~~~~l~~l~~~dL~~lGI~~~ghr~ki~~ai~~Lr~~~~~~ 70 (72)
T d1b0xa_ 25 AAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQAMRTQMQQM 70 (72)
T ss_dssp HTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHGG
T ss_pred HcCCCcHHHHHHCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 4667764 8889999998873334447889999999999876543
No 191
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=33.76 E-value=35 Score=24.51 Aligned_cols=49 Identities=12% Similarity=0.248 Sum_probs=33.1
Q ss_pred CCCCCCHHHHHHHHh-------cCCCeeEEEEEECC--CCCceeE--EE-EEeCCHHHHHH
Q 012034 36 LDESTTDEDLKKIFG-------EYGTITSAVVMRDG--DGKSKCF--GF-VNFENADDAAK 84 (472)
Q Consensus 36 Lp~~~tee~L~~~F~-------~fG~I~~v~i~~d~--~g~skG~--aF-V~F~~~e~A~~ 84 (472)
|..+++++++.++++ ....|.++.+-.+- .++++|| || +.|++.++-+.
T Consensus 10 ~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~~ 70 (103)
T d1q4ra_ 10 FKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAE 70 (103)
T ss_dssp ECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhhhhCceeEEEEeccccCCcccCCCccEEEEEEECCHHHHHH
Confidence 456778877666554 34678888887773 3666776 66 67888776654
No 192
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=31.32 E-value=36 Score=25.36 Aligned_cols=40 Identities=20% Similarity=0.389 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCeeEEEEEECCCCCceeEEEEEeCCHHHHHHHHHHHC
Q 012034 43 EDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 90 (472)
Q Consensus 43 e~L~~~F~~fG~I~~v~i~~d~~g~skG~aFV~F~~~e~A~~Av~~ln 90 (472)
.++++.++.+|.+ . | ..+| ...|..|++.++|..|.+.+.
T Consensus 60 ~~~~~~L~~~g~~---~-M-SGSG---stvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---R-L-TGTG---ACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSCE---E-E-CTTS---SCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhcccc---e-e-cCCC---CEEEEEeCCHHHHHHHHHHcC
Confidence 3556667788852 2 2 2233 468999999999999999874
No 193
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=28.01 E-value=33 Score=24.00 Aligned_cols=53 Identities=15% Similarity=0.236 Sum_probs=37.3
Q ss_pred eeeeecCCCCccHHHHHHHHhc-cC-ceEEEEEeeCCCCCcccEEEEEcCCHHHHHH
Q 012034 133 NLYIKNLGDSIDDEKLKELFSE-FG-TITSCKVMRDPSGISKGSGFVAFSTPEEASR 187 (472)
Q Consensus 133 ~l~V~nL~~~~t~e~L~~~F~~-~G-~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~ 187 (472)
+-|+-..+.+.+..++++.++. || .|..+..+.-..|. --|||.+....+|..
T Consensus 22 n~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~--KkA~V~L~~~~~a~d 76 (81)
T d1vqos1 22 NKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGE--KKAVVRLSEDDDAQE 76 (81)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSS--EEEEEEECTTSCHHH
T ss_pred CEEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCc--EEEEEEeCCCCcHHH
Confidence 5677788999999999998876 55 56677655543332 368999877655443
No 194
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=27.26 E-value=42 Score=25.01 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=30.5
Q ss_pred HHHHHHHhccCceEEEEEeeCCCCCcccEEEEEcCCHHHHHHHHHHhCC
Q 012034 146 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 194 (472)
Q Consensus 146 e~L~~~F~~~G~I~~v~i~~~~~g~s~g~afV~f~s~~~A~~Ai~~l~g 194 (472)
.++++.+..+|.+ + +.. |-..+|..|++.++|.+|.+.+..
T Consensus 60 ~~~~~~L~~~g~~---~-MSG----SGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---R-LTG----TGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSCE---E-ECT----TSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhcccc---e-ecC----CCCEEEEEeCCHHHHHHHHHHcCc
Confidence 4566777888852 3 332 344789999999999999998864
No 195
>d1ucva_ a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.16 E-value=57 Score=22.28 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=33.2
Q ss_pred chhhhHh--hcCCChHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 012034 410 AAKVTGM--LLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 451 (472)
Q Consensus 410 a~kitgm--ll~~~~~e~~~~~~~~~~l~~~v~~a~~~l~~~~~ 451 (472)
...|+|| |++|+.++|..|==....-+.||-.|+..|+....
T Consensus 28 ~~gi~~~~~L~~lt~~dL~~lGI~~~ghr~kIl~~i~~Lk~~~~ 71 (81)
T d1ucva_ 28 AGGYSSLGMVLRMNAQDVRALGITLMGHQKKILGSIQTMRAQLT 71 (81)
T ss_dssp HTTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HcCCchHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4467764 89999999988766666778999999999987653
Done!