Query         012040
Match_columns 472
No_of_seqs    201 out of 2428
Neff          11.0
Searched_HMMs 46136
Date          Fri Mar 29 07:59:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012040.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012040hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.4E-80 7.4E-85  585.1  43.5  412   49-470    25-463 (489)
  2 PLN02500 cytochrome P450 90B1  100.0 7.8E-78 1.7E-82  587.2  45.5  418   49-470    37-467 (490)
  3 PLN02774 brassinosteroid-6-oxi 100.0 2.9E-77 6.3E-82  578.5  44.6  412   49-470    30-441 (463)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 8.4E-78 1.8E-82  559.6  35.4  405   53-469    34-470 (499)
  5 PLN03141 3-epi-6-deoxocathaste 100.0 4.7E-76   1E-80  568.8  43.5  420   48-470     5-428 (452)
  6 PLN02971 tryptophan N-hydroxyl 100.0 4.8E-75   1E-79  572.0  44.8  414   49-469    56-506 (543)
  7 PLN02196 abscisic acid 8'-hydr 100.0 9.1E-75   2E-79  560.6  44.1  439    1-470     1-439 (463)
  8 PLN02183 ferulate 5-hydroxylas 100.0 2.6E-74 5.7E-79  565.0  42.2  411   49-470    35-482 (516)
  9 PLN02687 flavonoid 3'-monooxyg 100.0 8.3E-74 1.8E-78  561.6  45.3  412   49-470    33-479 (517)
 10 PLN02987 Cytochrome P450, fami 100.0 5.1E-73 1.1E-77  546.3  45.0  416   49-470    29-446 (472)
 11 PLN02302 ent-kaurenoic acid ox 100.0 1.6E-72 3.4E-77  552.4  46.1  419   48-469    40-463 (490)
 12 PLN02290 cytokinin trans-hydro 100.0 6.8E-73 1.5E-77  556.5  43.5  413   51-470    43-490 (516)
 13 PLN03234 cytochrome P450 83B1; 100.0 1.5E-72 3.3E-77  552.1  43.4  412   49-470    27-469 (499)
 14 PTZ00404 cytochrome P450; Prov 100.0 1.1E-72 2.4E-77  550.8  39.5  406   49-469    28-456 (482)
 15 PLN00168 Cytochrome P450; Prov 100.0 7.7E-72 1.7E-76  547.9  45.6  416   49-470    34-490 (519)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-73 4.5E-78  550.5  33.5  413   49-471    34-472 (497)
 17 PLN00110 flavonoid 3',5'-hydro 100.0 2.2E-71 4.8E-76  541.1  43.6  411   49-470    30-470 (504)
 18 PLN02394 trans-cinnamate 4-mon 100.0 2.3E-71   5E-76  544.4  42.7  412   49-470    29-473 (503)
 19 PLN03112 cytochrome P450 famil 100.0 5.3E-71 1.2E-75  542.8  44.3  413   48-470    30-478 (514)
 20 PLN02966 cytochrome P450 83A1  100.0 4.7E-71   1E-75  540.7  41.4  414   49-470    28-470 (502)
 21 PF00067 p450:  Cytochrome P450 100.0 1.8E-71   4E-76  543.9  32.6  411   52-470     1-440 (463)
 22 PLN02169 fatty acid (omega-1)- 100.0 7.5E-70 1.6E-74  529.2  43.4  404   53-469    34-474 (500)
 23 PLN03018 homomethionine N-hydr 100.0 1.4E-69   3E-74  529.2  45.4  415   48-470    38-497 (534)
 24 PLN03195 fatty acid omega-hydr 100.0 1.1E-69 2.5E-74  533.1  41.7  411   52-470    32-491 (516)
 25 PLN02655 ent-kaurene oxidase   100.0 3.3E-69 7.2E-74  522.7  40.8  405   52-470     1-438 (466)
 26 PLN02738 carotene beta-ring hy 100.0 5.3E-68 1.2E-72  523.3  38.8  388   74-470   151-569 (633)
 27 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-67 2.9E-72  479.5  35.0  410   51-469    51-492 (519)
 28 KOG0684 Cytochrome P450 [Secon 100.0 4.9E-67 1.1E-71  463.8  37.2  409   50-470    32-459 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 7.5E-67 1.6E-71  508.4  38.7  411   51-470    13-457 (489)
 30 PLN02426 cytochrome P450, fami 100.0 4.1E-64 8.8E-69  488.2  41.8  392   58-468    49-471 (502)
 31 PLN02648 allene oxide synthase 100.0 1.3E-63 2.7E-68  477.1  29.4  409   45-471    12-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.2E-54 4.7E-59  409.0  33.6  354   78-470    26-387 (411)
 33 PF12554 MOZART1:  Mitotic-spin  68.9      21 0.00045   22.1   4.8   43  291-333     5-47  (48)
 34 PF08492 SRP72:  SRP72 RNA-bind  62.0     3.4 7.4E-05   26.8   0.5   10  417-426    44-53  (59)
 35 PF05952 ComX:  Bacillus compet  51.6      16 0.00034   23.6   2.2   23  314-336     4-26  (57)
 36 PF09201 SRX:  SRX;  InterPro:   44.9      21 0.00046   27.6   2.4   22  441-462    19-40  (148)
 37 KOG0114 Predicted RNA-binding   44.8      64  0.0014   23.8   4.7   61   48-115    10-76  (124)
 38 PF12508 DUF3714:  Protein of u  43.7      17 0.00037   30.6   2.0   44  354-398    51-94  (200)
 39 TIGR00847 ccoS cytochrome oxid  37.9      69  0.0015   20.1   3.5   24    1-24      1-24  (51)
 40 PF13893 RRM_5:  RNA recognitio  37.0 1.1E+02  0.0023   19.2   4.7   34   81-114     2-39  (56)
 41 PF13625 Helicase_C_3:  Helicas  33.1      70  0.0015   24.8   3.9   40   75-116    75-114 (129)
 42 PF15102 TMEM154:  TMEM154 prot  32.9      29 0.00063   27.3   1.6    6   80-85    130-135 (146)
 43 PF12444 Sox_N:  Sox developmen  32.7      32 0.00069   24.3   1.6   21  450-470    60-80  (84)
 44 PRK06789 flagellar motor switc  29.9      52  0.0011   22.6   2.3   39  361-399    21-62  (74)
 45 PF14129 DUF4296:  Domain of un  29.3 2.1E+02  0.0046   20.3   6.7   51  288-338    29-79  (87)
 46 PF11227 DUF3025:  Protein of u  28.8      35 0.00076   28.9   1.6   21  400-420   191-211 (212)
 47 PF00558 Vpu:  Vpu protein;  In  27.8      70  0.0015   22.4   2.6    6   18-23     18-23  (81)
 48 PF15330 SIT:  SHP2-interacting  27.3 1.2E+02  0.0027   22.6   4.0   11   57-67     45-55  (107)
 49 PF09926 DUF2158:  Uncharacteri  26.5      66  0.0014   20.4   2.2   17   87-103     3-19  (53)
 50 KOG3653 Transforming growth fa  26.4 2.2E+02  0.0048   27.7   6.4   36   86-121   222-257 (534)
 51 TIGR00589 ogt O-6-methylguanin  26.1 1.3E+02  0.0028   21.0   3.8   60  324-388     2-66  (80)
 52 PF14483 Cut8_M:  Cut8 dimerisa  25.8      95  0.0021   18.1   2.6   11  321-331    25-35  (38)
 53 COG1707 ACT domain-containing   24.7      83  0.0018   25.4   2.8   38   74-111   154-196 (218)
 54 PF11138 DUF2911:  Protein of u  22.2      89  0.0019   24.9   2.6   41  379-420    52-99  (145)
 55 PF15050 SCIMP:  SCIMP protein   21.5 1.6E+02  0.0035   22.2   3.6   15   50-64     68-83  (133)
 56 PRK02302 hypothetical protein;  20.3 1.9E+02   0.004   20.8   3.6   31   85-115    24-54  (89)
 57 COG2101 SPT15 TATA-box binding  20.1      36 0.00078   27.7   0.1   30  415-447    36-71  (185)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.4e-80  Score=585.06  Aligned_cols=412  Identities=25%  Similarity=0.353  Sum_probs=343.6

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccch-hH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP-KS  127 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~-~~  127 (472)
                      .++||||.++|++||++++...    .+|..+.+|.++|||||++++|..++|||+|+++++|++.+++..|+++.. ..
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~----~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL----PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC----chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            6689999999999999998762    489999999999999999999999999999999999999999999998875 22


Q ss_pred             H-HHhc-CCCceecc-CChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhc---CCCeehHHHHHHHHHHHHH
Q 012040          128 L-TELM-GKSSILLI-NGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQ---DQPIYIQDESKNIAFQVLV  201 (472)
Q Consensus       128 ~-~~~~-g~~~~~~~-~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~vd~~~~~~~~~~~~i~  201 (472)
                      . ..+. |+.|+..+ +|+.|+.+||+....+...+..+.....-.++++.+++.+.+   +.+||+...+..+++++|+
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHH
Confidence            3 4444 55678877 899999999998888766555444555557778888887763   2689999999999999999


Q ss_pred             HHHcCCCChhh----HHHHHHHHHHHHhhhh------ccC---CCCCC--hHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 012040          202 KALINLDPGEQ----MEILKKQFQEFISGLM------SLP---INIPG--SQLYRSLQAKKKMARLIQEIIQSKRDGGMS  266 (472)
Q Consensus       202 ~~~fG~~~~~~----~~~~~~~~~~~~~~~~------~~~---~~~p~--~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  266 (472)
                      +++||.++...    ..++.+.+......+.      .++   .+++.  ....+......++.+++++.++++++.. +
T Consensus       181 ~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~  259 (489)
T KOG0156|consen  181 RMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G  259 (489)
T ss_pred             HHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c
Confidence            99999988763    1223333333332221      122   22221  1223344455568899999999987754 1


Q ss_pred             CCCCcccHHHHHHHhcC--CCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcC
Q 012040          267 NINVPKDVIDVLMMNNA--SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (472)
Q Consensus       267 ~~~~~~~~l~~ll~~~~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~  344 (472)
                      . ++.+|++|.+++..+  +...+++++|.+.+.++++||+|||++++.|++.+|++||++|+|+++||++++|    .+
T Consensus       260 ~-~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG----~~  334 (489)
T KOG0156|consen  260 D-EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVG----KG  334 (489)
T ss_pred             c-CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CC
Confidence            1 133899999998754  2223899999999999999999999999999999999999999999999999998    56


Q ss_pred             CCCChhhhcCChhHHHHHHhhhcCCCCcc-ccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCC
Q 012040          345 EPLSWSDYLSLPFTQNVITETLRMGNIII-GVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQD  423 (472)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~  423 (472)
                      +.++.+|+.+||||+|+|+|++|++|++| .++|.+.+|+.++||.|||||.|+++.|++||||++|+||++|+||||++
T Consensus       335 r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~  414 (489)
T KOG0156|consen  335 RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLD  414 (489)
T ss_pred             CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcC
Confidence            66999999999999999999999999999 77999999999999999999999999999999999999999999999999


Q ss_pred             CC-CC-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          424 NK-DI-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       424 ~~-~~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      .+ .. ....++|||.|+|.|||..+|.+++.++++.++++|+|++..+
T Consensus       415 ~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  415 SNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             CccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            74 33 4789999999999999999999999999999999999998754


No 2  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.8e-78  Score=587.21  Aligned_cols=418  Identities=33%  Similarity=0.704  Sum_probs=345.9

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .++||||+++|++||++.+......+.++.++.+++++||++|+++++++++|+++||+++++++.+++..|..+++...
T Consensus        37 ~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~  116 (490)
T PLN02500         37 FNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSI  116 (490)
T ss_pred             CCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHH
Confidence            46799999999999987665322223577889999999999999999999999999999999999988777765555444


Q ss_pred             HHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhcCCCeehHHHHHHHHHHHHHHHHcCCC
Q 012040          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLD  208 (472)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~  208 (472)
                      ..++|+.+++..+|+.|+++|+++.+.|+..++...+.+.+.+.+..+++.|.+++++|+.+.+.+++++++++++||.+
T Consensus       117 ~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg~~  196 (490)
T PLN02500        117 GGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMSMD  196 (490)
T ss_pred             HHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhCCC
Confidence            55667557888899999999999999999988876456788888888888887777899999999999999999999987


Q ss_pred             Chhh-HHHHHHHHHHHHhhhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CCCcccHHHHHHHhcCCC
Q 012040          209 PGEQ-MEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSN--INVPKDVIDVLMMNNASD  285 (472)
Q Consensus       209 ~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~--~~~~~~~l~~ll~~~~~~  285 (472)
                      .++. ...+.+.+..+.......+..+|...+.+..++.+.+.+++.+.++++++....+  .....|+++.+++.    
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~----  272 (490)
T PLN02500        197 PGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH----  272 (490)
T ss_pred             CCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc----
Confidence            6432 3333444444433332233345554455666777888888888888776532111  11346899999974    


Q ss_pred             CCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh-hcCCCCChhhhcCChhHHHHHHh
Q 012040          286 QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA-QLGEPLSWSDYLSLPFTQNVITE  364 (472)
Q Consensus       286 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~-~~~~~~~~~~~~~lp~l~a~i~E  364 (472)
                      ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+... .+++.++++|+.+||||+|||+|
T Consensus       273 ~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikE  352 (490)
T PLN02500        273 SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINE  352 (490)
T ss_pred             cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHH
Confidence            25899999999999999999999999999999999999999999999999874211 12346899999999999999999


Q ss_pred             hhcCCCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCCC---------CCCCcccc
Q 012040          365 TLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDI---------SNSSFTPF  435 (472)
Q Consensus       365 ~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~---------~~~~~~~F  435 (472)
                      +||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++..         ++..|+||
T Consensus       353 tlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpF  432 (490)
T PLN02500        353 TLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPF  432 (490)
T ss_pred             HHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCC
Confidence            999999999889999999999999999999999999999999999999999999999975421         24689999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          436 GGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       436 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |.|+|.|+|++||++|+++++++|+++|+|+++++
T Consensus       433 G~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~  467 (490)
T PLN02500        433 GGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEA  467 (490)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCC
Confidence            99999999999999999999999999999998764


No 3  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.9e-77  Score=578.52  Aligned_cols=412  Identities=36%  Similarity=0.703  Sum_probs=352.8

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .+.||||+++|++||++.+.+     +++.++.+++++||++|+++++++++++++||+++++++.++...|........
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  104 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFLK-----QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSM  104 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHHH-----hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHH
Confidence            456889999999999988765     566789999999999999999999999999999999999887776655544444


Q ss_pred             HHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhcCCCeehHHHHHHHHHHHHHHHHcCCC
Q 012040          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLD  208 (472)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~  208 (472)
                      ..++|+++++..+|+.|+++|+++.+.|+...++..+.+.+.+.++++++.|..++++|+.+.+..+++++++.++||.+
T Consensus       105 ~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~  184 (463)
T PLN02774        105 LDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAGTL  184 (463)
T ss_pred             HHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcCCC
Confidence            56677667888899999999999999999988875578888888999999898767899999999999999999999987


Q ss_pred             ChhhHHHHHHHHHHHHhhhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCcccHHHHHHHhcCCCCCC
Q 012040          209 PGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPL  288 (472)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~l  288 (472)
                      .......+.+.+..+......++.++|...+.+..++++.+.+.+.+.++++++...    ..+|+++.+++...++..+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~~~d~l~~ll~~~~~~~~~  260 (463)
T PLN02774        185 SKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGE----THTDMLGYLMRKEGNRYKL  260 (463)
T ss_pred             ChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCC----CcccHHHHHHhCccCCCCC
Confidence            655444555555555544444555677665667778889999999999988876432    3579999999754333458


Q ss_pred             CHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHHHHhhhcC
Q 012040          289 TDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRM  368 (472)
Q Consensus       289 ~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl  368 (472)
                      +++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+... .++.++++++.+||||+|||+|+||+
T Consensus       261 s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~-~~~~~~~~~l~~lpyl~a~ikE~lRl  339 (463)
T PLN02774        261 TDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR-PEDPIDWNDYKSMRFTRAVIFETSRL  339 (463)
T ss_pred             CHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC-CCCCCCHHHHhcCcHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999875211 23568999999999999999999999


Q ss_pred             CCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHH
Q 012040          369 GNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLA  448 (472)
Q Consensus       369 ~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~Fg~G~r~C~G~~~a  448 (472)
                      +|+++.+.|.+.+|++++||.||||+.|+++.+.+||||++|+||++|+||||++++......|+|||+|+|.|||++||
T Consensus       340 ~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A  419 (463)
T PLN02774        340 ATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELG  419 (463)
T ss_pred             CCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHH
Confidence            99999888999999999999999999999999999999999999999999999975533234699999999999999999


Q ss_pred             HHHHHHHHHHHHhcCccccccc
Q 012040          449 RLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       449 ~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      ++|++++++.|+++|++++..+
T Consensus       420 ~~e~~~~la~Ll~~f~~~~~~~  441 (463)
T PLN02774        420 IVEISTFLHYFVTRYRWEEVGG  441 (463)
T ss_pred             HHHHHHHHHHHHHhceEEECCC
Confidence            9999999999999999998653


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.4e-78  Score=559.58  Aligned_cols=405  Identities=22%  Similarity=0.294  Sum_probs=328.3

Q ss_pred             CCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccc--hhHH-H
Q 012040           53 LGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFY--PKSL-T  129 (472)
Q Consensus        53 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~--~~~~-~  129 (472)
                      |+|+++|++||+..+.....   ......+.+.+||+++.++.+.+|.++|+|||+|++|+.++.+.|..+.  ...- .
T Consensus        34 ~~~~p~p~~Gn~~~~~~~~~---~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~  110 (499)
T KOG0158|consen   34 PGPKPLPFLGNLPGMLKRER---PGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPE  110 (499)
T ss_pred             CCCCCCCcEecHHHHHhccC---cHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCC
Confidence            77888999999999887432   2455555555559999999999999999999999999999999888732  1111 1


Q ss_pred             HhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhcC----CCeehHHHHHHHHHHHHHHHHc
Q 012040          130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQD----QPIYIQDESKNIAFQVLVKALI  205 (472)
Q Consensus       130 ~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~vd~~~~~~~~~~~~i~~~~f  205 (472)
                      +-++..+++..+|+.||++|..++|.|++.++++ +.+.+++.++++++.+++.    ..+++.+.+.+++.|+|++++|
T Consensus       111 ~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~-m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~Af  189 (499)
T KOG0158|consen  111 DPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKK-MFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAF  189 (499)
T ss_pred             CcccccCchhccCchHHHHHHhhccccchhhHHH-HHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhc
Confidence            1233347888999999999999999999999997 8899999999999888752    3889999999999999999999


Q ss_pred             CCCChhhH---HHHHHHHHHHHhh-hhccC------CCCCChHH-----HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 012040          206 NLDPGEQM---EILKKQFQEFISG-LMSLP------INIPGSQL-----YRSLQAKKKMARLIQEIIQSKRDGGMSNINV  270 (472)
Q Consensus       206 G~~~~~~~---~~~~~~~~~~~~~-~~~~~------~~~p~~~~-----~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  270 (472)
                      |.+.++..   ..+.......... ....+      ..+|....     ....+..+.+.+.+.+.++.|.++.    ..
T Consensus       190 G~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~~----~~  265 (499)
T KOG0158|consen  190 GLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKEN----IE  265 (499)
T ss_pred             ccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence            99877652   2222211111111 00000      01111100     0112334455566666666663322    25


Q ss_pred             cccHHHHHHHhcCC---C---C-CCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhc
Q 012040          271 PKDVIDVLMMNNAS---D---Q-PLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQL  343 (472)
Q Consensus       271 ~~~~l~~ll~~~~~---~---~-~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  343 (472)
                      ..|+++.+++.+.+   +   . .++.++|+++++.+++||.||||++++.++|+|++|||+|+|+|+||+++..    .
T Consensus       266 r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~----~  341 (499)
T KOG0158|consen  266 RNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLE----E  341 (499)
T ss_pred             CchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhc----c
Confidence            78999999988631   1   1 4899999999999999999999999999999999999999999999999965    2


Q ss_pred             CCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCcccc-CEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCC
Q 012040          344 GEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIK-GYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQ  422 (472)
Q Consensus       344 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl  422 (472)
                      ...+|+|.+.+|+||++||+||||+||+++.+.|.|++|++++ ++.||||+.|.++.+++||||++||||++|+||||+
T Consensus       342 ~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~  421 (499)
T KOG0158|consen  342 KEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFE  421 (499)
T ss_pred             cCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCC
Confidence            3339999999999999999999999999999899999999999 999999999999999999999999999999999999


Q ss_pred             CCCCC--CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCcccccc
Q 012040          423 DNKDI--SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTL  469 (472)
Q Consensus       423 ~~~~~--~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  469 (472)
                      +++.+  ++..|+|||.|||.|+|++||.+|+|+.|++||++|++++++
T Consensus       422 ~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~  470 (499)
T KOG0158|consen  422 EENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP  470 (499)
T ss_pred             CCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC
Confidence            87754  688999999999999999999999999999999999999886


No 5  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.7e-76  Score=568.80  Aligned_cols=420  Identities=74%  Similarity=1.220  Sum_probs=359.2

Q ss_pred             CCCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH
Q 012040           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (472)
Q Consensus        48 ~~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~  127 (472)
                      +.++||||.++|++||++.+.......+++.++.+|+++||+||+++++++++||++||+++++++.+++..|..++...
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~   84 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKS   84 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchh
Confidence            46689999999999999988654333468899999999999999999999999999999999999998888787665455


Q ss_pred             HHHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhcCCCeehHHHHHHHHHHHHHHHHcCC
Q 012040          128 LTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINL  207 (472)
Q Consensus       128 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~  207 (472)
                      ...++|..+++..+|+.|+++|+++.+.|+..++...+.+.+.+.++++++.|.+++.+|+.+.+..++++++++++||.
T Consensus        85 ~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~G~  164 (452)
T PLN03141         85 LTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALISL  164 (452)
T ss_pred             HHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHHcCC
Confidence            56677766788889999999999999999888887656778888888888888766789999999999999999999998


Q ss_pred             CChhhHHHHHHHHHHHHhhhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC----CCcccHHHHHHHhcC
Q 012040          208 DPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI----NVPKDVIDVLMMNNA  283 (472)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~----~~~~~~l~~ll~~~~  283 (472)
                      +.++....+.+.+..+...+..++.++|...+.+..++.+++.+++.+.++++++....+.    ....|+++.+++.. 
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-  243 (452)
T PLN03141        165 EPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDG-  243 (452)
T ss_pred             CchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcC-
Confidence            7766555566666666655555555666655666667888999999999988765432110    12468999999763 


Q ss_pred             CCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHHHH
Q 012040          284 SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVIT  363 (472)
Q Consensus       284 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~  363 (472)
                       +..++++++..++.++++||+|||+++++|++++|++||++|+++++|++++.+.....+..++++++.+||||+|||+
T Consensus       244 -~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~  322 (452)
T PLN03141        244 -SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVIT  322 (452)
T ss_pred             -CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHH
Confidence             3458999999999999999999999999999999999999999999999988752222345689999999999999999


Q ss_pred             hhhcCCCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCc
Q 012040          364 ETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCP  443 (472)
Q Consensus       364 E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~Fg~G~r~C~  443 (472)
                      |++|++|+++.++|.+.+|++++||.||||+.|+++.+.+|+|+++|+||++|+||||++++. ++..|+|||.|+|.|+
T Consensus       323 E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~-~~~~~~pFG~G~R~C~  401 (452)
T PLN03141        323 ETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM-NNSSFTPFGGGQRLCP  401 (452)
T ss_pred             HHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC-CCCCCCCCCCCCCCCC
Confidence            999999999988999999999999999999999999999999999999999999999997643 3678999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          444 GLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       444 G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |++||++|++++++.|+++|+++++++
T Consensus       402 G~~lA~~el~~~la~ll~~f~~~~~~~  428 (452)
T PLN03141        402 GLDLARLEASIFLHHLVTRFRWVAEED  428 (452)
T ss_pred             hHHHHHHHHHHHHHHHHhcCeeecCCC
Confidence            999999999999999999999998764


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.8e-75  Score=571.99  Aligned_cols=414  Identities=14%  Similarity=0.178  Sum_probs=327.7

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcC-CeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYG-KVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~  127 (472)
                      .++||||+++|++||++.+...   ...+.++.+|.++|| +||++++|++++|+++||+++++++.+++..|.++....
T Consensus        56 ~~lPPGP~~lPiiGnl~~l~~~---~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         56 HPLPPGPTGFPIVGMIPAMLKN---RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCcCCCCCCcccchHHhccC---CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            4689999999999999887541   124678999999999 899999999999999999999999999888887765444


Q ss_pred             HHHhcCCC---ceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHH
Q 012040          128 LTELMGKS---SILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVL  200 (472)
Q Consensus       128 ~~~~~g~~---~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i  200 (472)
                      ....+|.+   +++..+|+.|+++|+++.+.+......+.+.+.+++.++.+.+.+.    +++++|+.+.+.+++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            44555542   3777889999999999987655544443477777777777766552    3467999999999999999


Q ss_pred             HHHHcCCCChh--------hHHHHHHHHHHHHhhhh-----ccCCCCCCh------HH-HHHHHHHHHHHHHHHHHHHhh
Q 012040          201 VKALINLDPGE--------QMEILKKQFQEFISGLM-----SLPINIPGS------QL-YRSLQAKKKMARLIQEIIQSK  260 (472)
Q Consensus       201 ~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~-----~~~~~~p~~------~~-~~~~~~~~~l~~~~~~~i~~~  260 (472)
                      ++++||.+..+        ......+.+..+.....     .+..++|..      .. +...+..+.+.+++.+.++++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999986521        01112222222222110     111122221      11 223334566777777887776


Q ss_pred             hcCCC-CCCCCcccHHHHHHHhcCCC-C-CCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 012040          261 RDGGM-SNINVPKDVIDVLMMNNASD-Q-PLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLK  337 (472)
Q Consensus       261 ~~~~~-~~~~~~~~~l~~ll~~~~~~-~-~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~  337 (472)
                      ++... ++.....|+++.+++..+++ . .++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            54211 11112469999999864322 2 489999999999999999999999999999999999999999999999998


Q ss_pred             HHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCC
Q 012040          338 ELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQF  416 (472)
Q Consensus       338 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  416 (472)
                      +    .++.++++++.+|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|
T Consensus       373 g----~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  448 (543)
T PLN02971        373 G----KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSF  448 (543)
T ss_pred             C----CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcccc
Confidence            6    46779999999999999999999999999994 789999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCcccccc
Q 012040          417 NPWRWQDNKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTL  469 (472)
Q Consensus       417 ~P~Rfl~~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  469 (472)
                      +||||++++..     ++..|+|||.|+|.|+|++||+.|+++++++||++|+|++++
T Consensus       449 ~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  506 (543)
T PLN02971        449 KPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAG  506 (543)
T ss_pred             CcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCC
Confidence            99999975321     356899999999999999999999999999999999999875


No 7  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=9.1e-75  Score=560.58  Aligned_cols=439  Identities=33%  Similarity=0.620  Sum_probs=360.0

Q ss_pred             CcchHHHHHHHhhHHHHHHHHHHHhcCCCCchhhhhhcccccccccCCCCCCCCCcCCccccchHHHHhhhccCCchHHH
Q 012040            1 MDNLLLILFLTAAASFFSTLILYLRSSSPSSSRSRRRSFTSQSHSHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFM   80 (472)
Q Consensus         1 m~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~   80 (472)
                      ||.+-+.+.++++.++++++.+|..+.+...     +          ..+.||||+++|++||++.+..    ++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----------~~~~Ppgp~~~P~iG~~~~~~~----~~~~~~~   61 (463)
T PLN02196          1 MDFSALFLTLFAGALFLCLLRFLAGFRRSSS-----T----------KLPLPPGTMGWPYVGETFQLYS----QDPNVFF   61 (463)
T ss_pred             CchHhhhhHHHHHHHHHHHHHHHHHhccCCC-----C----------CCCCCCCCCCCCccchHHHHHh----cCHHHHH
Confidence            6666444444444444444444444332211     1          1456899999999999887653    3788999


Q ss_pred             HHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHHHHhcCCCceeccCChhHHHHHHHHhhcCChhH
Q 012040           81 DKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSAD  160 (472)
Q Consensus        81 ~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~  160 (472)
                      .+++++||++|+++++++++|+++||+++++++.++...|.+.+.......+|..+++..+|+.|+++|+++.+.|+..+
T Consensus        62 ~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~  141 (463)
T PLN02196         62 ASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDA  141 (463)
T ss_pred             HHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHH
Confidence            99999999999999999999999999999999998877775444333345567668888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCeehHHHHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHHHhhhhccCCCCCChHHH
Q 012040          161 LKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLY  240 (472)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  240 (472)
                      +.. +.+.+.+.++++++.|. ++.+|+.+.+..+++++++.++||.+.......+.+.+..+...+..++..+|....+
T Consensus       142 l~~-~~~~i~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  219 (463)
T PLN02196        142 IRN-MVPDIESIAQESLNSWE-GTQINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFH  219 (463)
T ss_pred             HHH-HHHHHHHHHHHHHHcCC-CCeEEeHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcccccCCCccch
Confidence            887 88999999999999986 4579999999999999999999998754332333333333332222344455554456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCcccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHh
Q 012040          241 RSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLS  320 (472)
Q Consensus       241 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~  320 (472)
                      +..++.+.+.+++.+.++++++...    ...|+++.+++.   +.+++++++.++++++++||+|||+++++|++++|+
T Consensus       220 ~~~~a~~~~~~~~~~~i~~~~~~~~----~~~d~l~~ll~~---~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~  292 (463)
T PLN02196        220 KSMKARKELAQILAKILSKRRQNGS----SHNDLLGSFMGD---KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLA  292 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC----CcccHHHHHHhc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            6777888899999999988766432    357899999863   346899999999999999999999999999999999


Q ss_pred             hCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCccccCEEeCCCCEEeccc
Q 012040          321 DYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYF  400 (472)
Q Consensus       321 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~  400 (472)
                      +||++|+|+++|++++.+... .++.++++++.+||||+|||+|++|++|+++...|.+.+|++++||.|||||.|+++.
T Consensus       293 ~~P~vq~kl~~Ei~~~~~~~~-~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~  371 (463)
T PLN02196        293 ENPSVLEAVTEEQMAIRKDKE-EGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLF  371 (463)
T ss_pred             hCHHHHHHHHHHHHHHhcccc-cCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeH
Confidence            999999999999999875221 2467899999999999999999999999999888999999999999999999999999


Q ss_pred             hhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          401 RSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       401 ~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      +.+||||++|+||++|+||||++..  ++..++|||.|+|.|+|+++|++|++++++.|+++|+|++.++
T Consensus       372 ~~~~rd~~~~~dP~~F~PeRfl~~~--~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  439 (463)
T PLN02196        372 RNIHHSADIFSDPGKFDPSRFEVAP--KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGT  439 (463)
T ss_pred             HHhcCCchhcCCcCccChhhhcCCC--CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCC
Confidence            9999999999999999999999643  3678999999999999999999999999999999999998764


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.6e-74  Score=564.98  Aligned_cols=411  Identities=22%  Similarity=0.300  Sum_probs=330.8

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH-
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-  127 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~-  127 (472)
                      .++||||+++|++|+++.+..     ..+.++.+|+++||++|++++++.++|+++||+++++++.+++..|..+.... 
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~  109 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQ-----LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIA  109 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCC-----cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccc
Confidence            457899999999999877632     45678999999999999999999999999999999999998777676543222 


Q ss_pred             HHHhcC--CCceeccCChhHHHHHHH-HhhcCChhHHHHHHHHHHHHHHHHHHHhhh--cCCCeehHHHHHHHHHHHHHH
Q 012040          128 LTELMG--KSSILLINGGLQRRIHGL-IGSFFKSADLKAQITRDMEKYIHKSMENWM--QDQPIYIQDESKNIAFQVLVK  202 (472)
Q Consensus       128 ~~~~~g--~~~~~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vd~~~~~~~~~~~~i~~  202 (472)
                      ...+.+  +++++..+|+.|+++|++ +.+.|+...+.. +.+. .+.++.+++.+.  .++++|+.+.+..++++++++
T Consensus       110 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~  187 (516)
T PLN02183        110 ISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAES-WASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYR  187 (516)
T ss_pred             hhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHH-HHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHh
Confidence            222322  346778899999999998 578899888875 6665 457788888884  357899999999999999999


Q ss_pred             HHcCCCChhhHHHHHHHHHHHHhhhh------ccCC--CC-CChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC------C
Q 012040          203 ALINLDPGEQMEILKKQFQEFISGLM------SLPI--NI-PGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS------N  267 (472)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~------~  267 (472)
                      ++||.+.+.....+.+.+..+...+.      .+++  ++ +.....+..+.++.+.+++.+.++++++....      +
T Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  267 (516)
T PLN02183        188 AAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDS  267 (516)
T ss_pred             HhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence            99998765543444444443332211      1111  11 11123455566777777777777665432110      1


Q ss_pred             CCCcccHHHHHHHhcCC------------CCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 012040          268 INVPKDVIDVLMMNNAS------------DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIK  335 (472)
Q Consensus       268 ~~~~~~~l~~ll~~~~~------------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~  335 (472)
                      .....|+++.+++...+            +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       268 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~  347 (516)
T PLN02183        268 EEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELAD  347 (516)
T ss_pred             ccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            11346899999974321            125899999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCC
Q 012040          336 LKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ  415 (472)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  415 (472)
                      +++    .++.++.+++.+||||+|||+||||++|+++...|.+.+|++++||.|||||.|.++.+.+||||++|+||++
T Consensus       348 v~~----~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~  423 (516)
T PLN02183        348 VVG----LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDT  423 (516)
T ss_pred             HcC----CCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccc
Confidence            986    3457899999999999999999999999999878999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          416 FNPWRWQDNKDI----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       416 F~P~Rfl~~~~~----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |+||||++++..    +...|+|||.|+|.|+|++||++|+++++|+|+++|++++.++
T Consensus       424 F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~  482 (516)
T PLN02183        424 FKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDG  482 (516)
T ss_pred             cCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCC
Confidence            999999975432    2457999999999999999999999999999999999998664


No 9  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=8.3e-74  Score=561.58  Aligned_cols=412  Identities=21%  Similarity=0.299  Sum_probs=337.5

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .++||||.++|++||++.+..     +++.++.+|+++||+||++++|++++++++||+++++++.++...|..+.....
T Consensus        33 ~~~pPgp~~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~  107 (517)
T PLN02687         33 RPLPPGPRGWPVLGNLPQLGP-----KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSG  107 (517)
T ss_pred             CCCCccCCCCCccccHHhcCC-----chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccc
Confidence            457899999999999988743     578999999999999999999999999999999999999987777776543322


Q ss_pred             HHhc---CCCceeccCChhHHHHHHHHh-hcCChhHHHHHHHHHHHHHHHHHHHhhh---cCCCeehHHHHHHHHHHHHH
Q 012040          129 TELM---GKSSILLINGGLQRRIHGLIG-SFFKSADLKAQITRDMEKYIHKSMENWM---QDQPIYIQDESKNIAFQVLV  201 (472)
Q Consensus       129 ~~~~---g~~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~vd~~~~~~~~~~~~i~  201 (472)
                      ...+   ++++++..+|+.|+++|+++. +.|+...+.+ +.+.+++.++++++.+.   +++++|+.+.+..+++++++
T Consensus       108 ~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~  186 (517)
T PLN02687        108 AEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDD-FRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALG  186 (517)
T ss_pred             hhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHH-hHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            2222   233566678999999999998 7899888876 88999999999988885   34679999999999999999


Q ss_pred             HHHcCCCChh-----hHHHHHHHHHHHHhhhh------ccCC--CCCCh-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 012040          202 KALINLDPGE-----QMEILKKQFQEFISGLM------SLPI--NIPGS-QLYRSLQAKKKMARLIQEIIQSKRDGGMSN  267 (472)
Q Consensus       202 ~~~fG~~~~~-----~~~~~~~~~~~~~~~~~------~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (472)
                      .++||.+...     ....+.+.+..+.....      .+|.  +++.. ...+..+..+.+.+++.+.++++++....+
T Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  266 (517)
T PLN02687        187 RAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG  266 (517)
T ss_pred             HHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999987532     12334444333332111      1111  12111 123455567778888888888887653221


Q ss_pred             CCCcccHHHHHHHhcCC------CCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh
Q 012040          268 INVPKDVIDVLMMNNAS------DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (472)
Q Consensus       268 ~~~~~~~l~~ll~~~~~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~  341 (472)
                      .+...|+++.+++..++      +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+   
T Consensus       267 ~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---  343 (517)
T PLN02687        267 SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVG---  343 (517)
T ss_pred             CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC---
Confidence            12357999999986432      235899999999999999999999999999999999999999999999999876   


Q ss_pred             hcCCCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCC
Q 012040          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (472)
Q Consensus       342 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (472)
                       .++.++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+.+||||++|+||++|+|||
T Consensus       344 -~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        344 -RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             -CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence             45678999999999999999999999999994 7899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          421 WQDNKDI-------SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       421 fl~~~~~-------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |++++..       ++..|+|||.|+|.|+|++||++|+++++++||++|++++..+
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  479 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADG  479 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCC
Confidence            9975321       2457999999999999999999999999999999999998754


No 10 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=5.1e-73  Score=546.29  Aligned_cols=416  Identities=42%  Similarity=0.786  Sum_probs=340.4

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .++||||.++|++||++.+.......+++.++.+++++||++|+++++++++++++||+++++++.++...|..++....
T Consensus        29 ~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~  108 (472)
T PLN02987         29 MRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSI  108 (472)
T ss_pred             CCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHH
Confidence            56799999999999998875321113688899999999999999999999999999999999999988787866555555


Q ss_pred             HHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhcCCCeehHHHHHHHHHHHHHHHHcCCC
Q 012040          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLD  208 (472)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~  208 (472)
                      ..++|+++++..+|+.|+++|+++.+.++...+...+...+.+.++..++.|.  +++++.+.+.+++++++++++||.+
T Consensus       109 ~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~t~~vi~~~~fg~~  186 (472)
T PLN02987        109 SNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS--SRVLLMEEAKKITFELTVKQLMSFD  186 (472)
T ss_pred             HHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc--cceehHHHHHHHHHHHHHHHHcCCC
Confidence            67778668888999999999999876444444444232334555566666664  4799999999999999999999987


Q ss_pred             ChhhHHHHHHHHHHHHhhhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCcccHHHHHHHhcCCCCCC
Q 012040          209 PGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPL  288 (472)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~l  288 (472)
                      .....+.+.+.+......+...+..++...+++..++++++.+++.+.++++++....+.+..+|+++.+++..   .++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~---~~~  263 (472)
T PLN02987        187 PGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASD---DGF  263 (472)
T ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcC---CCC
Confidence            65443444444554443333222222233466777889999999999999887643221113579999999762   368


Q ss_pred             CHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHHHHhhhcC
Q 012040          289 TDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRM  368 (472)
Q Consensus       289 ~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl  368 (472)
                      +++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+... .+..++++++.+|||++||++|++|+
T Consensus       264 ~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~-~~~~~~~~~l~~lpyl~a~i~EtLRl  342 (472)
T PLN02987        264 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS-DSYSLEWSDYKSMPFTQCVVNETLRV  342 (472)
T ss_pred             CHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC-CCCCCCHHHHhcChHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999875221 23568999999999999999999999


Q ss_pred             CCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCCC--CCCCccccCCCCCCCccHH
Q 012040          369 GNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDI--SNSSFTPFGGGQRLCPGLD  446 (472)
Q Consensus       369 ~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~--~~~~~~~Fg~G~r~C~G~~  446 (472)
                      +|+++.+.|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++++..  ....++|||+|+|.|||++
T Consensus       343 ~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~  422 (472)
T PLN02987        343 ANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYE  422 (472)
T ss_pred             cCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHH
Confidence            99999889999999999999999999999999999999999999999999999975433  3468999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCccccccc
Q 012040          447 LARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       447 ~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      ||..|++++++.|+++|++++.++
T Consensus       423 lA~~e~~~~la~ll~~f~~~~~~~  446 (472)
T PLN02987        423 LARVALSVFLHRLVTRFSWVPAEQ  446 (472)
T ss_pred             HHHHHHHHHHHHHHhceEEEECCC
Confidence            999999999999999999998764


No 11 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.6e-72  Score=552.44  Aligned_cols=419  Identities=32%  Similarity=0.597  Sum_probs=348.0

Q ss_pred             CCCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCC--eEEEeecCcCEEEEcChhHHHHHHhcCCccccccch
Q 012040           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGK--VFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP  125 (472)
Q Consensus        48 ~~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~  125 (472)
                      ..++||||+++|++|+++.+......++++.++.+++++||+  +|+++++++++++++||+++++++.++ ..|.++++
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence            456899999999999999887543345788999999999997  799999999999999999999999876 45665544


Q ss_pred             hHHHHhcCCCceeccCChhHHHHHHHHhhcCC-hhHHHHHHHHHHHHHHHHHHHhhhcCCCeehHHHHHHHHHHHHHHHH
Q 012040          126 KSLTELMGKSSILLINGGLQRRIHGLIGSFFK-SADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKAL  204 (472)
Q Consensus       126 ~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~~~~  204 (472)
                      ......+|..++...+|+.|+++|+++.+.|+ ...+.. +.+.+.+.++++++.+.+++.+|+.+.+..++++++++++
T Consensus       119 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~-~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi~~~~  197 (490)
T PLN02302        119 ESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALST-YIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKIIMYIF  197 (490)
T ss_pred             hhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHH-HHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHHHHHH
Confidence            43334567656667799999999999999996 456665 8889999999999998776789999999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHhhhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-CCCcccHHHHHHHhcC
Q 012040          205 INLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSN-INVPKDVIDVLMMNNA  283 (472)
Q Consensus       205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~l~~ll~~~~  283 (472)
                      ||.+.......+.+.+......+..++..+|...+.+..++++++.+.+.+.++++++..... .....|+++.+++..+
T Consensus       198 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~  277 (490)
T PLN02302        198 LSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAED  277 (490)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhc
Confidence            999876554444444443333332333345554455666777888888888888876543211 1235799999998643


Q ss_pred             -CCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHHH
Q 012040          284 -SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVI  362 (472)
Q Consensus       284 -~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i  362 (472)
                       ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+........++++++++||||+|||
T Consensus       278 ~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i  357 (490)
T PLN02302        278 ENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVI  357 (490)
T ss_pred             cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHH
Confidence             3345899999999999999999999999999999999999999999999999986321112238999999999999999


Q ss_pred             HhhhcCCCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCC
Q 012040          363 TETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLC  442 (472)
Q Consensus       363 ~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~Fg~G~r~C  442 (472)
                      +|++|++|+++...|.+.+|++++||.||||+.|.++.+.+|||+++|+||++|+||||++... ++..++|||.|+|.|
T Consensus       358 ~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~-~~~~~~pFG~G~r~C  436 (490)
T PLN02302        358 DETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP-KAGTFLPFGLGSRLC  436 (490)
T ss_pred             HHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC-CCCCccCCCCCCcCC
Confidence            9999999999987899999999999999999999999999999999999999999999997543 367899999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhcCcccccc
Q 012040          443 PGLDLARLEASIFLHHLVTQFSGSTTL  469 (472)
Q Consensus       443 ~G~~~a~~~~~~~l~~ll~~f~~~~~~  469 (472)
                      +|++||.+|++++++.++++|++++..
T Consensus       437 ~G~~lA~~e~~~~la~ll~~f~~~~~~  463 (490)
T PLN02302        437 PGNDLAKLEISIFLHHFLLGYRLERLN  463 (490)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCeeEEcC
Confidence            999999999999999999999999764


No 12 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=6.8e-73  Score=556.49  Aligned_cols=413  Identities=21%  Similarity=0.262  Sum_probs=330.6

Q ss_pred             CCCCCcCCccccchHHHHhhhc--------------cCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcC
Q 012040           51 LPLGTLGWPIVGESLEFISCAL--------------TDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSD  116 (472)
Q Consensus        51 ~Ppgp~~~p~~G~~~~~~~~~~--------------~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~  116 (472)
                      .||||+++|++||++++.....              .++....+.+|+++||++|++++|+.++|+++||+++++++.++
T Consensus        43 ~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~  122 (516)
T PLN02290         43 GVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKY  122 (516)
T ss_pred             CCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcC
Confidence            3899999999999988754100              12334467899999999999999999999999999999999987


Q ss_pred             Cccccccchh--HHHHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhc----C-CCeehH
Q 012040          117 AKAFVPFYPK--SLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQ----D-QPIYIQ  189 (472)
Q Consensus       117 ~~~f~~~~~~--~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~vd~~  189 (472)
                      ...+...+..  .....+| ++++..+|+.|+++|+++.+.|+..++.. +.+.+.+.++++++.+.+    + .++|+.
T Consensus       123 ~~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~vd~~  200 (516)
T PLN02290        123 NTVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKG-YAGHMVECTKQMLQSLQKAVESGQTEVEIG  200 (516)
T ss_pred             CCCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCceEEhH
Confidence            4433322221  1233456 48888999999999999999999998886 888999999999998852    3 479999


Q ss_pred             HHHHHHHHHHHHHHHcCCCChhhH--HHHHHHHHHHHhhhh---ccCC--CCCChHHHHHHHHHHHHHHHHHHHHHhhhc
Q 012040          190 DESKNIAFQVLVKALINLDPGEQM--EILKKQFQEFISGLM---SLPI--NIPGSQLYRSLQAKKKMARLIQEIIQSKRD  262 (472)
Q Consensus       190 ~~~~~~~~~~i~~~~fG~~~~~~~--~~~~~~~~~~~~~~~---~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~  262 (472)
                      +.+..++++++++++||.+.....  ....+.+........   .++.  ++|.....+..+..+.+.+++.+.++++++
T Consensus       201 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~  280 (516)
T PLN02290        201 EYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQSRRD  280 (516)
T ss_pred             HHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998765321  112222222111111   1111  233322334445667788888888887765


Q ss_pred             CCCC--CCCCcccHHHHHHHhcC----CCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 012040          263 GGMS--NINVPKDVIDVLMMNNA----SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKL  336 (472)
Q Consensus       263 ~~~~--~~~~~~~~l~~ll~~~~----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~  336 (472)
                      ....  ......|+++.++++..    ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       281 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v  360 (516)
T PLN02290        281 CVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEV  360 (516)
T ss_pred             HhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            3211  11135789999997532    12247899999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCC-CCCCC
Q 012040          337 KELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY-EWPYQ  415 (472)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~  415 (472)
                      ++     ++.++++++++||||+|||+||||++|+++.++|.+.+|++++||.|||||.|+++.+.+||||++| +||++
T Consensus       361 ~~-----~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~  435 (516)
T PLN02290        361 CG-----GETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANE  435 (516)
T ss_pred             hC-----CCCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhh
Confidence            86     2378999999999999999999999999998899999999999999999999999999999999999 89999


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          416 FNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       416 F~P~Rfl~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |+||||++++......|+|||.|+|.|+|++||++|++++++.|+++|+++++++
T Consensus       436 F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~  490 (516)
T PLN02290        436 FNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDN  490 (516)
T ss_pred             cCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCC
Confidence            9999999643223567999999999999999999999999999999999998765


No 13 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.5e-72  Score=552.12  Aligned_cols=412  Identities=22%  Similarity=0.296  Sum_probs=332.4

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .+.||||.++|++||++.+..    .+++.++.+++++||++|++++++.++|+++||+++++++.++...|..+.....
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQMEK----FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcCC----CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            457899999999999988743    2577899999999999999999999999999999999999988777765543222


Q ss_pred             HHh---cCCCceeccCChhHHHHHHHH-hhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHH
Q 012040          129 TEL---MGKSSILLINGGLQRRIHGLI-GSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVL  200 (472)
Q Consensus       129 ~~~---~g~~~~~~~~g~~~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i  200 (472)
                      ...   .|....+..+++.|+++|+.+ .+.|+...+.. +.+.+++.++++++.|.    +++++|+.+.+..++++++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi  181 (499)
T PLN03234        103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVAS-FRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVV  181 (499)
T ss_pred             hhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHH-hHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHH
Confidence            111   232112345678999999974 68999888876 88999999999998884    3568999999999999999


Q ss_pred             HHHHcCCCChhhH---HHHHHHHHHHHhhhh--ccCCCCCC--------hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 012040          201 VKALINLDPGEQM---EILKKQFQEFISGLM--SLPINIPG--------SQLYRSLQAKKKMARLIQEIIQSKRDGGMSN  267 (472)
Q Consensus       201 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~p~--------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (472)
                      ++++||.+.....   ..+.+.+......+.  .....+|.        ...++..++.+++.+++.+.++++++....+
T Consensus       182 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (499)
T PLN03234        182 CRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK  261 (499)
T ss_pred             HHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            9999998766432   222232222221110  00001111        1124566778888899999988876532211


Q ss_pred             CCCcccHHHHHHHhcCC---CCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcC
Q 012040          268 INVPKDVIDVLMMNNAS---DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (472)
Q Consensus       268 ~~~~~~~l~~ll~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~  344 (472)
                       ...+|+++.+++..++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++    .+
T Consensus       262 -~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~----~~  336 (499)
T PLN03234        262 -QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIG----DK  336 (499)
T ss_pred             -CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CC
Confidence             1357899999875432   125899999999999999999999999999999999999999999999999986    45


Q ss_pred             CCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCC-CCCCCCCCCCCC
Q 012040          345 EPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPWRWQ  422 (472)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl  422 (472)
                      +.++++++.+||||+|||+|+||++|+++. +.|.+.+|++++||.|||||.|.++.+.+||||++| +||++|+||||+
T Consensus       337 ~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l  416 (499)
T PLN03234        337 GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFM  416 (499)
T ss_pred             CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhc
Confidence            678999999999999999999999999996 479999999999999999999999999999999999 899999999999


Q ss_pred             CCCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          423 DNKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       423 ~~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      ++...     .+..|+|||.|+|.|+|+++|++|++++++.++++|+|++.++
T Consensus       417 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  469 (499)
T PLN03234        417 KEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKG  469 (499)
T ss_pred             CCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCC
Confidence            75432     2567999999999999999999999999999999999998764


No 14 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.1e-72  Score=550.77  Aligned_cols=406  Identities=21%  Similarity=0.277  Sum_probs=327.3

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH-
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-  127 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~-  127 (472)
                      .+.+|||+++|++||++.+..     +++..+.+|+++||+||+++++++++|+++||+++++++.++...|..+.... 
T Consensus        28 ~~~~pgp~~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         28 KNELKGPIPIPILGNLHQLGN-----LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             CCCCCCCCCCCeeccHhhhcc-----cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            445789999999999988744     68899999999999999999999999999999999999987755565432211 


Q ss_pred             H-HHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHHHH
Q 012040          128 L-TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVLVK  202 (472)
Q Consensus       128 ~-~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i~~  202 (472)
                      . ...+| +|++..+|+.|+++|+++.+.|+...+.. +.+.+.+.++++++.|.    +++++|+.+.+.+++++++++
T Consensus       103 ~~~~~~~-~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  180 (482)
T PTZ00404        103 IKHGTFY-HGIVTSSGEYWKRNREIVGKAMRKTNLKH-IYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFK  180 (482)
T ss_pred             eeeeccC-CceeccChHHHHHHHHHHHHHHhhhcccc-HHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHH
Confidence            1 12234 58888999999999999999999988887 88999999999998874    356799999999999999999


Q ss_pred             HHcCCCChhh-------HHHHHHHHHHHHhhhhcc----CCCCCChH----HHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 012040          203 ALINLDPGEQ-------MEILKKQFQEFISGLMSL----PINIPGSQ----LYRSLQAKKKMARLIQEIIQSKRDGGMSN  267 (472)
Q Consensus       203 ~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~~p~~~----~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (472)
                      ++||.+....       ...+.+.+..++......    ...+..+.    .....+..+.+.+++.+.++++++....+
T Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  260 (482)
T PTZ00404        181 YIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPE  260 (482)
T ss_pred             HHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence            9999876431       123333333333221110    00011111    11223455667777777777665532221


Q ss_pred             CCCcccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 012040          268 INVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPL  347 (472)
Q Consensus       268 ~~~~~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  347 (472)
                        ..+|+++.++++..+.+..+.+++++++.++++||+|||+++++|++++|++||++|+|+++|++++++    .++.+
T Consensus       261 --~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~----~~~~~  334 (482)
T PTZ00404        261 --VPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN----GRNKV  334 (482)
T ss_pred             --CcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc----CCCCC
Confidence              357999999987432222233458899999999999999999999999999999999999999999986    34568


Q ss_pred             ChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccc-cCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCC
Q 012040          348 SWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNK  425 (472)
Q Consensus       348 ~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~  425 (472)
                      +++++.+||||+|||+||||++|+++. ++|.+.+|+++ +||.|||||.|.++.+++||||++|+||++|+||||++..
T Consensus       335 ~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~  414 (482)
T PTZ00404        335 LLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD  414 (482)
T ss_pred             CccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC
Confidence            999999999999999999999999994 79999999999 9999999999999999999999999999999999999753


Q ss_pred             CCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCcccccc
Q 012040          426 DISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTL  469 (472)
Q Consensus       426 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  469 (472)
                        ++..|+|||.|+|.|+|++||++|+++++++++++|+++++.
T Consensus       415 --~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~  456 (482)
T PTZ00404        415 --SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSID  456 (482)
T ss_pred             --CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCC
Confidence              367899999999999999999999999999999999998754


No 15 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=7.7e-72  Score=547.94  Aligned_cols=416  Identities=21%  Similarity=0.301  Sum_probs=331.4

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .++||||+++|++||++.+...  ..+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|..+.....
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNS--SADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccc--cccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            4578999999999998765421  12578899999999999999999999999999999999999988777776544333


Q ss_pred             HHhcCCC-ceec--cCChhHHHHHH-HHhhcCChhHHHHHHHHHHHHHHHHHHHhhhc----CCCeehHHHHHHHHHHHH
Q 012040          129 TELMGKS-SILL--INGGLQRRIHG-LIGSFFKSADLKAQITRDMEKYIHKSMENWMQ----DQPIYIQDESKNIAFQVL  200 (472)
Q Consensus       129 ~~~~g~~-~~~~--~~g~~~~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~~~~~i  200 (472)
                      ..++|.+ +++.  .+|+.|+++|| ++.+.|+..++++ +.+.+.+.++.+++.|.+    ++.+|+.+.+..++.+++
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRL-FAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            3445532 3443  67999999986 7999999999887 889999999999888863    246899999999999999


Q ss_pred             HHHHcCCCChhhH-HHHHHHHHHHH---hhhhccCCCCCC-------hHHHHHHHHHHHHHHHHHHHHHhhhcCCC---C
Q 012040          201 VKALINLDPGEQM-EILKKQFQEFI---SGLMSLPINIPG-------SQLYRSLQAKKKMARLIQEIIQSKRDGGM---S  266 (472)
Q Consensus       201 ~~~~fG~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~---~  266 (472)
                      +.++||.+.++.. ..+...+....   .....+...+|.       ..+.+..+..+++.+++.+.++++++...   .
T Consensus       191 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (519)
T PLN00168        191 VLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQ  270 (519)
T ss_pred             HHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            9999999876432 12222222211   111111111221       11233445677888888888877654310   0


Q ss_pred             -C--C----CCcccHHHHHHHhcC---CCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 012040          267 -N--I----NVPKDVIDVLMMNNA---SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKL  336 (472)
Q Consensus       267 -~--~----~~~~~~l~~ll~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~  336 (472)
                       .  .    ....|+++.+++...   .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++
T Consensus       271 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v  350 (519)
T PLN00168        271 GGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAK  350 (519)
T ss_pred             cCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence             0  0    014589999997542   22459999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCC
Q 012040          337 KELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ  415 (472)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  415 (472)
                      ++   ...+.++++++.+||||+|||+|++|++|+++. .+|.+.+|++++||.|||||.|.++.+.+||||++|+||++
T Consensus       351 ~~---~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~  427 (519)
T PLN00168        351 TG---DDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPME  427 (519)
T ss_pred             hC---CCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccc
Confidence            85   123568999999999999999999999999984 58999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC-------C-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          416 FNPWRWQDNKD-------I-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       416 F~P~Rfl~~~~-------~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |+||||++++.       . ++..|+|||.|+|.|||++||++|+++++++||++|+|++.++
T Consensus       428 F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  490 (519)
T PLN00168        428 FVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPG  490 (519)
T ss_pred             cCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCC
Confidence            99999997421       1 2457999999999999999999999999999999999998653


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.1e-73  Score=550.50  Aligned_cols=413  Identities=26%  Similarity=0.415  Sum_probs=330.9

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcC--Cccccccchh
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSD--AKAFVPFYPK  126 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~--~~~f~~~~~~  126 (472)
                      .+.||||.++|++|+++.+....  .+...++.++..+||++|+.|+||.++++++||+.+++|+.+.  ...+...++.
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~  111 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE  111 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH
Confidence            55689999999999999987643  4678899999999999999999999999999999999999643  3334455666


Q ss_pred             HHHHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhh--c-CCCeehHHHHHHHHHHHHHHH
Q 012040          127 SLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM--Q-DQPIYIQDESKNIAFQVLVKA  203 (472)
Q Consensus       127 ~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~vd~~~~~~~~~~~~i~~~  203 (472)
                      .+.+++|+ |+++++|+.|+++||++.++|+...+++ +...+.+.+..+...+.  . +..+|+.+.+.++++|+++.+
T Consensus       112 ~~~~~lG~-gll~~~g~~W~~~Rk~~~~~f~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  112 SLKPWLGD-GLLFSDGEKWHKHRKLLTPAFHFEILKS-FVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHHhcC-ccccCCchHHHHHHhhccHhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            88899998 9999999999999999999999999998 55555555555444443  2 333999999999999999999


Q ss_pred             HcCCCC-hhh---HHHHHHHHHHHHhhhhccCCCCC-Ch-------HHHHHHHHHHHHHHHHHHHHHhhhcCCCCC----
Q 012040          204 LINLDP-GEQ---MEILKKQFQEFISGLMSLPINIP-GS-------QLYRSLQAKKKMARLIQEIIQSKRDGGMSN----  267 (472)
Q Consensus       204 ~fG~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~p-~~-------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~----  267 (472)
                      +||... +.+   ...+.+.+...... ...+...| ..       ..++..++.+.+++.+.+.|++++++...+    
T Consensus       190 ~~G~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~  268 (497)
T KOG0157|consen  190 AMGPESLDAEGPELFEYVQAFDDLTEL-ISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGE  268 (497)
T ss_pred             hcCCccccccCCcccHHHHHHHHHHHH-HHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            999322 212   22333333322221 11111222 11       234556688999999999999888632111    


Q ss_pred             CCCcccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 012040          268 INVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPL  347 (472)
Q Consensus       268 ~~~~~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  347 (472)
                      .....|+++.+...  .+..+++++|.+++.++++||+||||++++|+++.|+.||++|+|+++|++++.+.+   +...
T Consensus       269 ~~~~~d~L~~~~~~--~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~---~~~~  343 (497)
T KOG0157|consen  269 EKKRLDFLDTLLLE--EDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNR---DDKW  343 (497)
T ss_pred             cchhhhHHHHHHHh--ccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC---CCCC
Confidence            12357888863333  226799999999999999999999999999999999999999999999999998621   1222


Q ss_pred             ChhhhcCChhHHHHHHhhhcCCCCccccccccccCcccc-CEEeCCCCEEeccchhhccCCCCCC-CCCCCCCCCCCCCC
Q 012040          348 SWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIK-GYLIPKGWCFFAYFRSVHLDESNYE-WPYQFNPWRWQDNK  425 (472)
Q Consensus       348 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~P~Rfl~~~  425 (472)
                      +..+.++|+||++||+||||||||+|.+.|.+.+|++++ ||.||||+.|.++++.+|||+.+|+ ||++|+||||++++
T Consensus       344 ~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~  423 (497)
T KOG0157|consen  344 EVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGE  423 (497)
T ss_pred             ChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCC
Confidence            333333699999999999999999999999999999995 8999999999999999999999995 99999999999754


Q ss_pred             CC---CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCcccccccC
Q 012040          426 DI---SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLMW  471 (472)
Q Consensus       426 ~~---~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~  471 (472)
                      ..   ++.+|+|||+|||.|+|++||++|+|+++++|+++|+|++..+.
T Consensus       424 ~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~  472 (497)
T KOG0157|consen  424 EKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD  472 (497)
T ss_pred             CcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC
Confidence            43   47899999999999999999999999999999999999987653


No 17 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.2e-71  Score=541.06  Aligned_cols=411  Identities=18%  Similarity=0.271  Sum_probs=329.4

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH-
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-  127 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~-  127 (472)
                      .++||||+++|++||++.+..     +++.++.+++++||+||++++|++++|+++||+++++++.++...|..+.... 
T Consensus        30 ~~~pPgp~~~Pl~G~l~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~  104 (504)
T PLN00110         30 RKLPPGPRGWPLLGALPLLGN-----MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAG  104 (504)
T ss_pred             CCCcccCCCCCeeechhhcCC-----chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccc
Confidence            567999999999999876632     57889999999999999999999999999999999999998776777654322 


Q ss_pred             -HHHhcC-CCceeccCChhHHHHHHHHhh-cCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHH
Q 012040          128 -LTELMG-KSSILLINGGLQRRIHGLIGS-FFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVL  200 (472)
Q Consensus       128 -~~~~~g-~~~~~~~~g~~~~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i  200 (472)
                       .....| +++++..+|+.|+++|+++.+ .|+...++. +.+.+.+.+..+++.+.    +++++|+.+++..++++++
T Consensus       105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi  183 (504)
T PLN00110        105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALED-WSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMI  183 (504)
T ss_pred             hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHH-hhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHH
Confidence             122233 346777889999999999985 688877776 77777777777766653    4668999999999999999


Q ss_pred             HHHHcCCCCh----hhHHHHHHHHHHHHhhh------hccCC--CCCChH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 012040          201 VKALINLDPG----EQMEILKKQFQEFISGL------MSLPI--NIPGSQ-LYRSLQAKKKMARLIQEIIQSKRDGGMSN  267 (472)
Q Consensus       201 ~~~~fG~~~~----~~~~~~~~~~~~~~~~~------~~~~~--~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (472)
                      ++++||.+..    .....+.+.+.......      ..+|.  +++... .++..+..+.+.+++.+.++++++....+
T Consensus       184 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  263 (504)
T PLN00110        184 GQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER  263 (504)
T ss_pred             HHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            9999998651    11233444333332211      01111  111111 13334456677777777777766532211


Q ss_pred             CCCcccHHHHHHHhcC--CCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCC
Q 012040          268 INVPKDVIDVLMMNNA--SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGE  345 (472)
Q Consensus       268 ~~~~~~~l~~ll~~~~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  345 (472)
                       ....|+++.+++..+  .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+    .++
T Consensus       264 -~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~  338 (504)
T PLN00110        264 -KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIG----RNR  338 (504)
T ss_pred             -ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CCC
Confidence             134689999997643  2346899999999999999999999999999999999999999999999999986    456


Q ss_pred             CCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCC
Q 012040          346 PLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDN  424 (472)
Q Consensus       346 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~  424 (472)
                      .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|.++.+.+|+||++|+||++|+||||+++
T Consensus       339 ~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~  418 (504)
T PLN00110        339 RLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSE  418 (504)
T ss_pred             CCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCC
Confidence            68999999999999999999999999995 78999999999999999999999999999999999999999999999965


Q ss_pred             CCC--C----CCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          425 KDI--S----NSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       425 ~~~--~----~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      +..  +    ...|+|||.|+|.|+|++||++|+++++++|+++|++++..+
T Consensus       419 ~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  470 (504)
T PLN00110        419 KNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG  470 (504)
T ss_pred             CCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC
Confidence            432  1    247999999999999999999999999999999999998653


No 18 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.3e-71  Score=544.35  Aligned_cols=412  Identities=18%  Similarity=0.242  Sum_probs=318.7

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .+.||||+++|++|+++.+.+    +..+..+.+|+++||+||+++++++++|+++||+.+++++.+++..|..+.....
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~----~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGD----DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCC----CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            446899999999999887643    1356899999999999999999999999999999999999887666765432222


Q ss_pred             -HHhcC--CCceeccCChhHHHHHHHHh-hcCChhHHHHHHHHHHHHHHHHHHHhhhc-----CCCeehHHHHHHHHHHH
Q 012040          129 -TELMG--KSSILLINGGLQRRIHGLIG-SFFKSADLKAQITRDMEKYIHKSMENWMQ-----DQPIYIQDESKNIAFQV  199 (472)
Q Consensus       129 -~~~~g--~~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~vd~~~~~~~~~~~~  199 (472)
                       ..+.|  .++++..+|+.|+++|+.+. +.|+...+.. +.+.+++.++++++.+.+     ++.+|+.+.+..+++++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dv  183 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQ-YRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNI  183 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHH-hhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHH
Confidence             33333  23577788999999999986 8898888875 778888888888887753     34589999999999999


Q ss_pred             HHHHHcCCCChhhHHHHHHHHHHHHhhh----h----ccCCCCCCh-----HHHH-HHHHHHHHHH-HHHHHHHhhhcCC
Q 012040          200 LVKALINLDPGEQMEILKKQFQEFISGL----M----SLPINIPGS-----QLYR-SLQAKKKMAR-LIQEIIQSKRDGG  264 (472)
Q Consensus       200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~p~~-----~~~~-~~~~~~~l~~-~~~~~i~~~~~~~  264 (472)
                      +++++||.+++...+.....+.......    .    .+...+|..     .+.+ .......... +....++++++..
T Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        184 MYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999877543211111111111110    0    000111110     1111 1111122222 2233455444321


Q ss_pred             C---CCCCCcccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh
Q 012040          265 M---SNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (472)
Q Consensus       265 ~---~~~~~~~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~  341 (472)
                      .   .+.+..+|+++.+++...+ ..++++++...+.++++||+|||+++++|++++|++||++|+|+++||+++.+   
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~---  339 (503)
T PLN02394        264 SAKGMDKEGLKCAIDHILEAQKK-GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLG---  339 (503)
T ss_pred             hhccCCcchhhhHHHHHHhcccc-CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC---
Confidence            1   1112347899999987543 35899999999999999999999999999999999999999999999999986   


Q ss_pred             hcCCCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCC
Q 012040          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (472)
Q Consensus       342 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (472)
                       .++.++++++++||||+|||+|+||++|+++. .+|.+.+|++++||.|||||.|.++.+.+||||++|+||++|+|||
T Consensus       340 -~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeR  418 (503)
T PLN02394        340 -PGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPER  418 (503)
T ss_pred             -CCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccc
Confidence             34568999999999999999999999999995 4799999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          421 WQDNKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       421 fl~~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |+++++.     +...|+|||.|+|.|+|++||++|++++++.++++|++++.++
T Consensus       419 wl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~  473 (503)
T PLN02394        419 FLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPG  473 (503)
T ss_pred             cCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCC
Confidence            9975431     2567999999999999999999999999999999999998764


No 19 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.3e-71  Score=542.80  Aligned_cols=413  Identities=19%  Similarity=0.240  Sum_probs=329.5

Q ss_pred             CCCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH
Q 012040           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (472)
Q Consensus        48 ~~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~  127 (472)
                      ..++||||+++|++||++.+..     +++.++.+++++||++|++++++.++++++||+++++++.+++..|+++....
T Consensus        30 ~~~~ppgp~~~pl~G~~~~~~~-----~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~  104 (514)
T PLN03112         30 SLRLPPGPPRWPIVGNLLQLGP-----LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTL  104 (514)
T ss_pred             CCCCccCCCCCCeeeeHHhcCC-----chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcc
Confidence            3567999999999999988743     57889999999999999999999999999999999999988777777543321


Q ss_pred             H--HHhcCC-CceeccCChhHHHHHHHH-hhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHH
Q 012040          128 L--TELMGK-SSILLINGGLQRRIHGLI-GSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQV  199 (472)
Q Consensus       128 ~--~~~~g~-~~~~~~~g~~~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~  199 (472)
                      .  ...+|. .+++..+|+.|+++|+++ .+.|+..++.. +.+.+.+.++.+++.+.    +++++|+.+.+..+++++
T Consensus       105 ~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~-~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~v  183 (514)
T PLN03112        105 AAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLES-FAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNN  183 (514)
T ss_pred             cceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHH-hhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHH
Confidence            1  223343 245567899999999995 46799888876 77888888888877543    356799999999999999


Q ss_pred             HHHHHcCCCChh-------hHHHHHHHHHHHHhhh--h----ccCC--CC-CChHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 012040          200 LVKALINLDPGE-------QMEILKKQFQEFISGL--M----SLPI--NI-PGSQLYRSLQAKKKMARLIQEIIQSKRDG  263 (472)
Q Consensus       200 i~~~~fG~~~~~-------~~~~~~~~~~~~~~~~--~----~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~  263 (472)
                      ++.++||.+...       ....+.+.+..+....  .    .++.  ++ +.....+..+..+.+.+++.+.++++++.
T Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  263 (514)
T PLN03112        184 VTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRA  263 (514)
T ss_pred             HHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987531       1122333333222111  0    1111  11 11122444556777888888888776653


Q ss_pred             CCC--CCCCcccHHHHHHHhcCCC--CCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 012040          264 GMS--NINVPKDVIDVLMMNNASD--QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKEL  339 (472)
Q Consensus       264 ~~~--~~~~~~~~l~~ll~~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~  339 (472)
                      ...  ......|+++.++++..++  ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+ 
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~-  342 (514)
T PLN03112        264 RSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVG-  342 (514)
T ss_pred             hcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcC-
Confidence            211  1123468999999864322  24899999999999999999999999999999999999999999999999986 


Q ss_pred             hhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCC
Q 012040          340 KAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNP  418 (472)
Q Consensus       340 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  418 (472)
                         .++.++++++.+||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+.+||||++|+||++|+|
T Consensus       343 ---~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~P  419 (514)
T PLN03112        343 ---RNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRP  419 (514)
T ss_pred             ---CCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCC
Confidence               45678999999999999999999999999995 68999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          419 WRWQDNKDI-------SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       419 ~Rfl~~~~~-------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |||+.+...       .+..|+|||.|+|.|+|++||++|++++++.+|++|+|++..+
T Consensus       420 eRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  478 (514)
T PLN03112        420 ERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDG  478 (514)
T ss_pred             cccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence            998754211       1357999999999999999999999999999999999998643


No 20 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4.7e-71  Score=540.66  Aligned_cols=414  Identities=22%  Similarity=0.319  Sum_probs=326.4

Q ss_pred             CCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH
Q 012040           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (472)
Q Consensus        49 ~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~  128 (472)
                      .++||||+++|++||++.+..    .+++.++.+|+++||++|++++++.++|+++||+.+++++.+++..|.++.....
T Consensus        28 ~~~ppgp~~~p~~G~l~~l~~----~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         28 YKLPPGPSPLPVIGNLLQLQK----LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             CCCCcCCCCCCeeccHHhcCC----CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            457899999999999988743    2578899999999999999999999999999999999999987666664432222


Q ss_pred             HHh--cCCCce-eccCChhHHHHHHH-HhhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHH
Q 012040          129 TEL--MGKSSI-LLINGGLQRRIHGL-IGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVL  200 (472)
Q Consensus       129 ~~~--~g~~~~-~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i  200 (472)
                      ...  .|.+++ +..+|+.|+++|++ +.+.|+...+.. +.+.+.+.++++++.|.    +++++|+.+.+..++++++
T Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi  182 (502)
T PLN02966        104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVAT-FKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVV  182 (502)
T ss_pred             ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHH
Confidence            222  232223 44579999999998 888999988886 89999999999998885    3457999999999999999


Q ss_pred             HHHHcCCCChhhHH---HHHHHHHHHHhhhhc--cCCCCCC-------hHHHH-HHHHHHHHHHHHHHHHHhhhcCCCCC
Q 012040          201 VKALINLDPGEQME---ILKKQFQEFISGLMS--LPINIPG-------SQLYR-SLQAKKKMARLIQEIIQSKRDGGMSN  267 (472)
Q Consensus       201 ~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (472)
                      +.++||.+.+...+   .+.+.+.........  +..++|.       ..+.+ .....+.+.+.+.+.+++..+....+
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (502)
T PLN02966        183 CRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK  262 (502)
T ss_pred             HHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999997653322   222222221111100  0011111       01111 22344556666666666654321111


Q ss_pred             CCCcccHHHHHHHhcCC---CCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcC
Q 012040          268 INVPKDVIDVLMMNNAS---DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (472)
Q Consensus       268 ~~~~~~~l~~ll~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~  344 (472)
                       ....++++.+++..++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.+  ++
T Consensus       263 -~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~--~~  339 (502)
T PLN02966        263 -PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK--GS  339 (502)
T ss_pred             -cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc--CC
Confidence             1246899999975432   23589999999999999999999999999999999999999999999999998621  22


Q ss_pred             CCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCC-CCCCCCCCCCCC
Q 012040          345 EPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPWRWQ  422 (472)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl  422 (472)
                      +.++++++++||||+|||+|+||++|+++. .+|.+.+|++++||.|||||.|.++.+.+||||++| +||++|+||||+
T Consensus       340 ~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl  419 (502)
T PLN02966        340 TFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFL  419 (502)
T ss_pred             CcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhc
Confidence            458999999999999999999999999995 689999999999999999999999999999999999 999999999999


Q ss_pred             CCCCC---CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          423 DNKDI---SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       423 ~~~~~---~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      +++..   .+..|+|||.|+|.|+|++||++|++++++.+|++|+|++.++
T Consensus       420 ~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~  470 (502)
T PLN02966        420 EKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNG  470 (502)
T ss_pred             CCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCC
Confidence            75432   3568999999999999999999999999999999999998764


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.8e-71  Score=543.88  Aligned_cols=411  Identities=25%  Similarity=0.433  Sum_probs=344.0

Q ss_pred             CCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH-HH-
Q 012040           52 PLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-LT-  129 (472)
Q Consensus        52 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~-~~-  129 (472)
                      ||||+++|++||++.+..   .++++.++.+++++||+||+++++++++++|+||+.+++++..++..++.+.... .. 
T Consensus         1 Ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~   77 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR---KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEI   77 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT---THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC---CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccc
Confidence            799999999999999884   1368899999999999999999999999999999999999999977777553222 22 


Q ss_pred             --HhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhcC----CCeehHHHHHHHHHHHHHHH
Q 012040          130 --ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQD----QPIYIQDESKNIAFQVLVKA  203 (472)
Q Consensus       130 --~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~vd~~~~~~~~~~~~i~~~  203 (472)
                        ...++.+++..+|+.|+.+|+++.+.|+.....+ +.+.+.+.++++++.+.+.    +.+|+.++++.+++++++++
T Consensus        78 ~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~  156 (463)
T PF00067_consen   78 FRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKILK-LEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRV  156 (463)
T ss_dssp             HHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHHH-HHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccceeeeecccccccccccccc
Confidence              2344458889999999999999999999882224 8888989888888888642    36999999999999999999


Q ss_pred             HcCCCChhh----HHHHHHHHHHHHhhh----------hccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 012040          204 LINLDPGEQ----MEILKKQFQEFISGL----------MSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNIN  269 (472)
Q Consensus       204 ~fG~~~~~~----~~~~~~~~~~~~~~~----------~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  269 (472)
                      +||.+++..    ...+.+.+..+...+          ..+..+++....++..++.+.+.+.+.+.++++++....+..
T Consensus       157 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  236 (463)
T PF00067_consen  157 LFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDE  236 (463)
T ss_dssp             HHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSS
T ss_pred             cccceeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999976521    223333333332111          112234555555666667788999999999988775543323


Q ss_pred             CcccHHHHHHHhc-C-CC-CCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCC
Q 012040          270 VPKDVIDVLMMNN-A-SD-QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEP  346 (472)
Q Consensus       270 ~~~~~l~~ll~~~-~-~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~  346 (472)
                      ...|+++.+++.. + ++ ..++++++..++..+++||+|||+.+++|++++|++||++|+|+++|++++.+    .++.
T Consensus       237 ~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~  312 (463)
T PF00067_consen  237 SRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG----DGRE  312 (463)
T ss_dssp             SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT----TSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccc
Confidence            5789999999985 2 23 37999999999999999999999999999999999999999999999999975    4557


Q ss_pred             CChhhhcCChhHHHHHHhhhcCCCCcc-ccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCC
Q 012040          347 LSWSDYLSLPFTQNVITETLRMGNIII-GVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNK  425 (472)
Q Consensus       347 ~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~  425 (472)
                      ++.+++++||||+|||+||+|++|+++ .++|.+.+|++++||.|||||.|+++.+.+|+||++|+||++|+||||++.+
T Consensus       313 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~  392 (463)
T PF00067_consen  313 ITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDER  392 (463)
T ss_dssp             HHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            899999999999999999999999999 8889999999999999999999999999999999999999999999999987


Q ss_pred             C---CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          426 D---ISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       426 ~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      .   .++..|+|||.|+|.|||++||++|++++++.||++|+|+++++
T Consensus       393 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~  440 (463)
T PF00067_consen  393 GISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPG  440 (463)
T ss_dssp             STBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTT
T ss_pred             cccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCC
Confidence            6   25889999999999999999999999999999999999999764


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=7.5e-70  Score=529.24  Aligned_cols=404  Identities=17%  Similarity=0.193  Sum_probs=314.4

Q ss_pred             CCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEE---EeecCcCEEEEcChhHHHHHHhcCCccccccch-hHH
Q 012040           53 LGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFK---SHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP-KSL  128 (472)
Q Consensus        53 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~---~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~-~~~  128 (472)
                      |||.++|++||+..+....  ...++++.+...+||..++   +++|+.++++++||+.+++|+.++...|.++.. ...
T Consensus        34 p~p~~~pl~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         34 PILKNWPFLGMLPGMLHQI--PRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCcccchHHHHHcc--CcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            7888999999998876532  1344555555556887666   678899999999999999999987666665432 233


Q ss_pred             HHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHH-HHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHHHHH
Q 012040          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQ-ITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVLVKA  203 (472)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i~~~  203 (472)
                      ..++| +|+++++|+.|+++|+++.+.|+..++... +.+.+.+.++.+++.+.    ++.++|+.+.+.++++++++++
T Consensus       112 ~~~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  190 (500)
T PLN02169        112 FDVLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSIL  190 (500)
T ss_pred             HHhhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhh
Confidence            45566 599999999999999999999998877642 23555555555555553    3467999999999999999999


Q ss_pred             HcCCCChhh-----HHHHHHHHHHHHhhh---hccC-------CCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-C-
Q 012040          204 LINLDPGEQ-----MEILKKQFQEFISGL---MSLP-------INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGM-S-  266 (472)
Q Consensus       204 ~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~-------~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~-  266 (472)
                      +||.+....     ...+.+.+.......   ...+       .+++....++..++.+.+.+++.+.|+++++... . 
T Consensus       191 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~  270 (500)
T PLN02169        191 MTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRA  270 (500)
T ss_pred             eeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999865421     112222222211110   0111       1222223345567788888999998888765311 1 


Q ss_pred             -CCCCcccHHHHHHHhcCC----CCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh
Q 012040          267 -NINVPKDVIDVLMMNNAS----DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (472)
Q Consensus       267 -~~~~~~~~l~~ll~~~~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~  341 (472)
                       ..+..+|+++.+++....    +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++     
T Consensus       271 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v-----  345 (500)
T PLN02169        271 ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK-----  345 (500)
T ss_pred             cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh-----
Confidence             111246899999976321    1247889999999999999999999999999999999999999999999876     


Q ss_pred             hcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCccc-cCEEeCCCCEEeccchhhccCCCCC-CCCCCCCCC
Q 012040          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPW  419 (472)
Q Consensus       342 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~  419 (472)
                           ++++++.+||||+|||+||||++|++|...|.+.+|.++ +||.|||||.|.++.+.+||||++| +||++|+||
T Consensus       346 -----~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~Pe  420 (500)
T PLN02169        346 -----FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPE  420 (500)
T ss_pred             -----CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCcc
Confidence                 357899999999999999999999999888887777665 8999999999999999999999999 899999999


Q ss_pred             CCCCCCCC--C--CCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCcccccc
Q 012040          420 RWQDNKDI--S--NSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTL  469 (472)
Q Consensus       420 Rfl~~~~~--~--~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  469 (472)
                      ||+++++.  +  +..|+|||+|||.|+|++||++|+++++++||++|++++++
T Consensus       421 Rfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~  474 (500)
T PLN02169        421 RWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIE  474 (500)
T ss_pred             ccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcC
Confidence            99975443  2  57899999999999999999999999999999999998864


No 23 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.4e-69  Score=529.16  Aligned_cols=415  Identities=18%  Similarity=0.213  Sum_probs=320.5

Q ss_pred             CCCCCCCCcCCccccchHHHHhhhccCCc-hHHHHHHHHhc-CCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccch
Q 012040           48 LGQLPLGTLGWPIVGESLEFISCALTDRP-ESFMDKRRCMY-GKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP  125 (472)
Q Consensus        48 ~~~~Ppgp~~~p~~G~~~~~~~~~~~~~~-~~~~~~~~~ky-G~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~  125 (472)
                      ..++||||.++|++||++.+...    ++ ..++.++.++| |+||++++|++++|+|+||+++++++.+++..|.++..
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~----~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~  113 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMT----RPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQ  113 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccC----CCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCC
Confidence            35689999999999999987531    12 13455666665 79999999999999999999999999988777877654


Q ss_pred             hHHHHhcCCC--ceecc-CChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHH
Q 012040          126 KSLTELMGKS--SILLI-NGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQ  198 (472)
Q Consensus       126 ~~~~~~~g~~--~~~~~-~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~  198 (472)
                      ......++.+  +++.. +|+.|+++|+++.+.|......+.+....+..++++++.+.    .+.++|+.+.+.+++++
T Consensus       114 ~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  193 (534)
T PLN03018        114 LSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYA  193 (534)
T ss_pred             chhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHH
Confidence            3333334432  46655 59999999999999987766665566665556666766654    34579999999999999


Q ss_pred             HHHHHHcCCCChhh------HHH----HHHHHHHHHhhhhccCC---------CCC---C-hHHHHHHHHHHHHHHHHHH
Q 012040          199 VLVKALINLDPGEQ------MEI----LKKQFQEFISGLMSLPI---------NIP---G-SQLYRSLQAKKKMARLIQE  255 (472)
Q Consensus       199 ~i~~~~fG~~~~~~------~~~----~~~~~~~~~~~~~~~~~---------~~p---~-~~~~~~~~~~~~l~~~~~~  255 (472)
                      ++++++||.+....      ...    +...+..+...+..++.         ++.   . ....+.....+.+.+++.+
T Consensus       194 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  273 (534)
T PLN03018        194 VTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNP  273 (534)
T ss_pred             HHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Confidence            99999999875321      011    11111111111111111         111   0 0112233344567777777


Q ss_pred             HHHhhhcCCC--CCCCCcccHHHHHHHhcCCCC--CCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHH
Q 012040          256 IIQSKRDGGM--SNINVPKDVIDVLMMNNASDQ--PLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTD  331 (472)
Q Consensus       256 ~i~~~~~~~~--~~~~~~~~~l~~ll~~~~~~~--~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~  331 (472)
                      .++++++...  .......|+++.+++..+++.  .++++++++++.++++||+|||+++++|++++|+.||++|+|+++
T Consensus       274 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~  353 (534)
T PLN03018        274 IIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALK  353 (534)
T ss_pred             HHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            7777654211  111124689999997644322  389999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCcccc-ccccccCccccCEEeCCCCEEeccchhhccCCCCC
Q 012040          332 ENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGV-MRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY  410 (472)
Q Consensus       332 Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~  410 (472)
                      ||+++++    .++.++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+.+|+||++|
T Consensus       354 Ei~~v~~----~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~  429 (534)
T PLN03018        354 ELDEVVG----KDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIW  429 (534)
T ss_pred             HHHHHhC----CCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccC
Confidence            9999986    456789999999999999999999999999955 69999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC--------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          411 EWPYQFNPWRWQDNKDI--------SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       411 ~~p~~F~P~Rfl~~~~~--------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      +||++|+||||+++++.        .+..++|||.|+|.|+|++||.+|+++++++|+++|++++.++
T Consensus       430 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  497 (534)
T PLN03018        430 KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQD  497 (534)
T ss_pred             CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCC
Confidence            99999999999965431        2467999999999999999999999999999999999997654


No 24 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.1e-69  Score=533.15  Aligned_cols=411  Identities=20%  Similarity=0.232  Sum_probs=316.8

Q ss_pred             CCCCcCCccccchHHHHhhhccCCchHHHHHHHHhc---CCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccch--h
Q 012040           52 PLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMY---GKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP--K  126 (472)
Q Consensus        52 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~--~  126 (472)
                      ||||+++|++||++.+..     + +..+.+|.++|   |++|+++++++++++++||+++++++.++...|.....  .
T Consensus        32 ~pgp~~~p~~G~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  105 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK-----N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS  105 (516)
T ss_pred             cCCCCCCCeecchHHHHh-----c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH
Confidence            589999999999887654     1 23456667777   89999999999999999999999999876445544321  1


Q ss_pred             HHHHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHH-HHHHHHHHHhhh----cCCCeehHHHHHHHHHHHHH
Q 012040          127 SLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDM-EKYIHKSMENWM----QDQPIYIQDESKNIAFQVLV  201 (472)
Q Consensus       127 ~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i~  201 (472)
                      ....++| +++++.+|+.|+++|+++++.|+...++. +.+.+ .+.++.+.+.+.    +++++|+.+++..+++++++
T Consensus       106 ~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        106 YMEVLLG-DGIFNVDGELWRKQRKTASFEFASKNLRD-FSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHHHhc-CeeeccCcHHHHHHHHhcchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence            2234455 47888899999999999999999988876 66654 555555554443    35679999999999999999


Q ss_pred             HHHcCCCChhh-----HHHHHHHHHHHHhhh---hccCCC-----CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC--
Q 012040          202 KALINLDPGEQ-----MEILKKQFQEFISGL---MSLPIN-----IPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS--  266 (472)
Q Consensus       202 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~-----~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~--  266 (472)
                      .++||.+....     ...+.+.+.......   ...+.+     ++....++..+..+.+.+++.+.++++++....  
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (516)
T PLN03195        184 KVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR  263 (516)
T ss_pred             HHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999876531     112333333222111   001111     111112233445667777788888776543110  


Q ss_pred             --CCCCcccHHHHHHHhcCC-CCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh--
Q 012040          267 --NINVPKDVIDVLMMNNAS-DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA--  341 (472)
Q Consensus       267 --~~~~~~~~l~~ll~~~~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~--  341 (472)
                        ......|+++.+++..++ +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+...  
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence              111356899999976432 346899999999999999999999999999999999999999999999999875210  


Q ss_pred             --------------hcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCccc-cCEEeCCCCEEeccchhhccC
Q 012040          342 --------------QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLD  406 (472)
Q Consensus       342 --------------~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d  406 (472)
                                    ..++.++++++.+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+.+|||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                          01345899999999999999999999999999888888887666 899999999999999999999


Q ss_pred             CCCC-CCCCCCCCCCCCCCCC--C-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          407 ESNY-EWPYQFNPWRWQDNKD--I-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       407 ~~~~-~~p~~F~P~Rfl~~~~--~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |++| +||++|+||||++++.  . .+..|+|||+|+|.|+|++||++|++++++.++++|+++++++
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~  491 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPG  491 (516)
T ss_pred             hhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCC
Confidence            9999 9999999999996432  1 3567999999999999999999999999999999999998754


No 25 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=3.3e-69  Score=522.68  Aligned_cols=405  Identities=19%  Similarity=0.250  Sum_probs=315.4

Q ss_pred             CCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhH-HHH
Q 012040           52 PLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-LTE  130 (472)
Q Consensus        52 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~-~~~  130 (472)
                      ||||+++|++||++++..    .+++.++.+|+++||+||+++++++++|+|+||+++++++.++...|..+.... ...
T Consensus         1 ppgp~~lP~iG~l~~~~~----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~   76 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE----KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTV   76 (466)
T ss_pred             CcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHH
Confidence            689999999999988754    257899999999999999999999999999999999999998877787654322 233


Q ss_pred             hcCCC-ceecc-CChhHHHHHHHHhhc-CChhHHHHHHHHHHHHHHHHHHHhhh------cCCCeehHHHHHHHHHHHHH
Q 012040          131 LMGKS-SILLI-NGGLQRRIHGLIGSF-FKSADLKAQITRDMEKYIHKSMENWM------QDQPIYIQDESKNIAFQVLV  201 (472)
Q Consensus       131 ~~g~~-~~~~~-~g~~~~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~vd~~~~~~~~~~~~i~  201 (472)
                      +.|+. +++.. +|+.|+++|+.+.+. ++...... +.+.+++.++.+++.+.      .++++|+.+.+.++++++++
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKR-FRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHH-hHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHH
Confidence            44432 35554 489999999866554 55444443 66655555555554442      25679999999999999999


Q ss_pred             HHHcCCCChhhH-----------HHHHHHHHHHHhhhh------ccC--CCCCChHHHH-HHHHHHHHHHHHHHHHHhhh
Q 012040          202 KALINLDPGEQM-----------EILKKQFQEFISGLM------SLP--INIPGSQLYR-SLQAKKKMARLIQEIIQSKR  261 (472)
Q Consensus       202 ~~~fG~~~~~~~-----------~~~~~~~~~~~~~~~------~~~--~~~p~~~~~~-~~~~~~~l~~~~~~~i~~~~  261 (472)
                      .++||.+.....           ..+...+..+.....      .+|  .++|...+.+ ..+....+.+++.+.+++++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998755321           111111222211110      111  1233221222 22223344567777777665


Q ss_pred             cCCCCCCCCcccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh
Q 012040          262 DGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (472)
Q Consensus       262 ~~~~~~~~~~~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~  341 (472)
                      +..... +...|+++.+++..   ..++++++.+.+.++++||+|||+++++|++++|++||++|+|+++|++++.+   
T Consensus       236 ~~~~~~-~~~~d~l~~ll~~~---~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~---  308 (466)
T PLN02655        236 KRIARG-EERDCYLDFLLSEA---THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG---  308 (466)
T ss_pred             HhhcCC-CCcccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC---
Confidence            432111 13468999999763   35899999999999999999999999999999999999999999999999986   


Q ss_pred             hcCCCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCC
Q 012040          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (472)
Q Consensus       342 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (472)
                       . ..++++++.+||||+|||+|+||++|+++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       309 -~-~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR  386 (466)
T PLN02655        309 -D-ERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPER  386 (466)
T ss_pred             -C-CCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccc
Confidence             2 349999999999999999999999999995 4799999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC--CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          421 WQDNKDI--SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       421 fl~~~~~--~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      |++++..  +...++|||.|+|.|||++||+.|+++++++||++|++++.++
T Consensus       387 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~  438 (466)
T PLN02655        387 FLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREG  438 (466)
T ss_pred             cCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCC
Confidence            9976433  3578999999999999999999999999999999999998754


No 26 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5.3e-68  Score=523.32  Aligned_cols=388  Identities=18%  Similarity=0.266  Sum_probs=308.7

Q ss_pred             CCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHHHHhcCCCceeccCChhHHHHHHHHh
Q 012040           74 DRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIG  153 (472)
Q Consensus        74 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~~~~~g~~~~~~~~g~~~~~~R~~~~  153 (472)
                      +..+..+.+|+++|||||++++|+.++++|+||+.+++++..+...|..+..........+.+++..+|+.|+++|+++.
T Consensus       151 g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~  230 (633)
T PLN02738        151 EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIV  230 (633)
T ss_pred             chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhcc
Confidence            46789999999999999999999999999999999999999776667655332222222335888889999999999999


Q ss_pred             hcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHHHHHHcCCCChhh--HHHHHHHHHHHHhhh
Q 012040          154 SFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVLVKALINLDPGEQ--MEILKKQFQEFISGL  227 (472)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~  227 (472)
                      +.|+...+.. +.+.+.+.++++++.+.    .++++|+.+.+..+++|+++.++||.+++..  .+.+.+.+.......
T Consensus       231 p~Fs~~~v~~-l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~  309 (633)
T PLN02738        231 PALHQKYVAA-MISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREA  309 (633)
T ss_pred             HhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHH
Confidence            9999988876 88999999999988885    3568999999999999999999999877531  122222222222111


Q ss_pred             -----hccCCC-CCC-----hHHHHHHHHHHHHHHHHHHHHHhhhc---CC----CC--CCCCcccHHHHHHHhcCCCCC
Q 012040          228 -----MSLPIN-IPG-----SQLYRSLQAKKKMARLIQEIIQSKRD---GG----MS--NINVPKDVIDVLMMNNASDQP  287 (472)
Q Consensus       228 -----~~~~~~-~p~-----~~~~~~~~~~~~l~~~~~~~i~~~~~---~~----~~--~~~~~~~~l~~ll~~~~~~~~  287 (472)
                           ..++.| +|.     ...++..+..+.+.+.+.+.++..++   +.    ..  ......++++.+++.   +..
T Consensus       310 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~---~~~  386 (633)
T PLN02738        310 EDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLAS---GDD  386 (633)
T ss_pred             HHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHc---CCC
Confidence                 111111 111     11122333444455555544443221   10    00  011345899999975   235


Q ss_pred             CCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHHHHhhhc
Q 012040          288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLR  367 (472)
Q Consensus       288 l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  367 (472)
                      ++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++++++     ++.++++++++||||+|||+|+||
T Consensus       387 ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-----~~~~t~edL~kLPYL~AVIkEtLR  461 (633)
T PLN02738        387 VSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-----DRFPTIEDMKKLKYTTRVINESLR  461 (633)
T ss_pred             CCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-----CCCCCHHHHccCHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999999999975     356899999999999999999999


Q ss_pred             CCCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCC----C-CCCCccccCCCCCCC
Q 012040          368 MGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKD----I-SNSSFTPFGGGQRLC  442 (472)
Q Consensus       368 l~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~----~-~~~~~~~Fg~G~r~C  442 (472)
                      |+|+++...|.+.+|++++||.|||||.|+++.+.+||||++|+||++|+||||+.++.    . ....|+|||.|+|.|
T Consensus       462 L~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~C  541 (633)
T PLN02738        462 LYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKC  541 (633)
T ss_pred             cCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCC
Confidence            99999988899999999999999999999999999999999999999999999984321    1 356899999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          443 PGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       443 ~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      +|++||++|++++++.|+++|+|++.++
T Consensus       542 iG~~lA~~El~l~LA~Llr~F~~el~~~  569 (633)
T PLN02738        542 VGDMFASFENVVATAMLVRRFDFQLAPG  569 (633)
T ss_pred             cCHHHHHHHHHHHHHHHHHhCeeEeCCC
Confidence            9999999999999999999999998754


No 27 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-67  Score=479.52  Aligned_cols=410  Identities=16%  Similarity=0.259  Sum_probs=335.0

Q ss_pred             CCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEe-ecCcCEEEEcChhHHHHHHhcCCccccc--cch--
Q 012040           51 LPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSH-IFGTPTIVSTDAEVSKFVLQSDAKAFVP--FYP--  125 (472)
Q Consensus        51 ~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~dp~~i~~i~~~~~~~f~~--~~~--  125 (472)
                      ..|||+++|++|.++.+.. ....+.|+....++++||+||+.. +|+...|.+.||+.++.++.+++..-..  ...  
T Consensus        51 ~IP~p~~~~~l~~l~~~~~-~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~~~w  129 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRA-GGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLIEPW  129 (519)
T ss_pred             hcCCCCCccHHHHHHHHHh-hhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCcccccchh
Confidence            4489999999999886333 333578999999999999999999 7888999999999999999998754222  111  


Q ss_pred             hHHHHhcC-CCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhhc-------CCCeehHHHHHHHHH
Q 012040          126 KSLTELMG-KSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQ-------DQPIYIQDESKNIAF  197 (472)
Q Consensus       126 ~~~~~~~g-~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~vd~~~~~~~~~~  197 (472)
                      ..-.+.++ ..|++..+|+.|++.|..+++.+-.....+.|.+.+++.+++++..++.       ..+.|+.+.+.++++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl  209 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL  209 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence            11244444 4699999999999999999999666555555889999999888887652       247799999999999


Q ss_pred             HHHHHHHcCCCChh-------hHHHHHHHHHHHHhh---hhccC---CCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 012040          198 QVLVKALINLDPGE-------QMEILKKQFQEFISG---LMSLP---INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGG  264 (472)
Q Consensus       198 ~~i~~~~fG~~~~~-------~~~~~~~~~~~~~~~---~~~~~---~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  264 (472)
                      +.++.++||.+.+.       +...+.+.+.+++..   +...|   .+++.+.|++..++.+.+.++..+.|++..+..
T Consensus       210 Esi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l  289 (519)
T KOG0159|consen  210 ESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEEL  289 (519)
T ss_pred             HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999986553       233344443333322   11222   246677788888888888888888887765432


Q ss_pred             CCCC----CCcccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 012040          265 MSNI----NVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELK  340 (472)
Q Consensus       265 ~~~~----~~~~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~  340 (472)
                      ..+.    +....++..|.++     .++.+++...+++++.||.||||+++.|+||.|++||++|+++++|+.++..  
T Consensus       290 ~~~~~~~~~~~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p--  362 (519)
T KOG0159|consen  290 EKQDSAGSEYTGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLP--  362 (519)
T ss_pred             HhccccccchhHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCC--
Confidence            2111    1123344444433     5899999999999999999999999999999999999999999999999876  


Q ss_pred             hhcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCC
Q 012040          341 AQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (472)
Q Consensus       341 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (472)
                       .++..++.+++.+||||.||||||+||||.++++.|...+|.+++||.|||||.|.++.+.+.+||++|++|++|+|||
T Consensus       363 -~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeR  441 (519)
T KOG0159|consen  363 -SGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPER  441 (519)
T ss_pred             -CcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhh
Confidence             2356799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC-CC-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCcccccc
Q 012040          421 WQDNK-DI-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTL  469 (472)
Q Consensus       421 fl~~~-~~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  469 (472)
                      ||.++ .. ++..++|||.|+|.|+||++|++|+.+.+++++++|+++..+
T Consensus       442 WL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~  492 (519)
T KOG0159|consen  442 WLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLH  492 (519)
T ss_pred             hcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecC
Confidence            99988 55 799999999999999999999999999999999999999877


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.9e-67  Score=463.85  Aligned_cols=409  Identities=24%  Similarity=0.337  Sum_probs=344.7

Q ss_pred             CCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCcccc--ccchhH
Q 012040           50 QLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFV--PFYPKS  127 (472)
Q Consensus        50 ~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~--~~~~~~  127 (472)
                      .||-.-.++||+|++..+.+     ++..++++.++|||+||++.++|+.+.++.||+....+++.....++  ..+...
T Consensus        32 ~PPli~gwiP~lG~a~~fgk-----~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l  106 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGK-----DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKL  106 (486)
T ss_pred             CCcccccCcchhhHHHHhcc-----CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHh
Confidence            34445556799999999976     89999999999999999999999999999999999999988744443  333345


Q ss_pred             HHHhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHh-hhcC-CCeehHHHHHHHHHHHHHHHHc
Q 012040          128 LTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMEN-WMQD-QPIYIQDESKNIAFQVLVKALI  205 (472)
Q Consensus       128 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~vd~~~~~~~~~~~~i~~~~f  205 (472)
                      ..+.+|.+-+...++....++.+++...+...++++ +.+.+.+++++.++. |.+. .+-.+.++...+++.+...+++
T Consensus       107 ~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~-~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll~  185 (486)
T KOG0684|consen  107 TTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKS-LVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLLG  185 (486)
T ss_pred             hhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHH-HHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhhh
Confidence            577788644445678888899999999999999997 889999999988887 5543 4445778888888888888888


Q ss_pred             CCCChhhHHHHHHHHHHHHhhh----hccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCcccHHHHHHHh
Q 012040          206 NLDPGEQMEILKKQFQEFISGL----MSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMN  281 (472)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~  281 (472)
                      |......+......+.++...+    ..+|.++|.+..++..++++++.+.+.+.+.++++..+.   ...|+++.+++.
T Consensus       186 ~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~---~~~dmlq~l~~~  262 (486)
T KOG0684|consen  186 GEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISK---WDNDMLQSLMEK  262 (486)
T ss_pred             hhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcccc---ccHHHHHHHHHH
Confidence            8765542233333333333322    234557888888888899999999999999999987643   367899999984


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHH
Q 012040          282 NASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNV  361 (472)
Q Consensus       282 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~  361 (472)
                      ...+.+.++++++..++.++|||++||+.+.+|++++|++|||+++.+++|+++++|   .....++++.+++||.|++|
T Consensus       263 y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG---~~~~~l~~d~L~~lplL~~~  339 (486)
T KOG0684|consen  263 YKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLG---EKKEKLTYDQLKDLPLLDSC  339 (486)
T ss_pred             hhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhh---ccCCCCCHHHHhcchHHHHH
Confidence            445778999999999999999999999999999999999999999999999999997   23344999999999999999


Q ss_pred             HHhhhcCCCCccccccccccCccccC----EEeCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCCCC-------CC
Q 012040          362 ITETLRMGNIIIGVMRKAMRDIEIKG----YLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDIS-------NS  430 (472)
Q Consensus       362 i~E~lRl~p~~~~~~r~~~~d~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~-------~~  430 (472)
                      |+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.+++..+|+||++|+||+.|+|+||++++++.       ..
T Consensus       340 IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~y  419 (486)
T KOG0684|consen  340 IKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDY  419 (486)
T ss_pred             HHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccc
Confidence            99999999999999999999999976    99999999999999999999999999999999999776651       34


Q ss_pred             CccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          431 SFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       431 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      .|+|||+|.|.|||+.||.+|+|+++..+|++|++++..+
T Consensus       420 y~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~  459 (486)
T KOG0684|consen  420 YYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG  459 (486)
T ss_pred             cccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC
Confidence            5699999999999999999999999999999999998753


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=7.5e-67  Score=508.40  Aligned_cols=411  Identities=17%  Similarity=0.249  Sum_probs=327.9

Q ss_pred             CCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcCCccccccchhHH-H
Q 012040           51 LPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL-T  129 (472)
Q Consensus        51 ~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~~~~-~  129 (472)
                      +=.|-.|||++|+.+....+..++.++..+.+|+++||+||+++++++++++++||+++++++.+.+..|..+..... .
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            336889999999999999888777899999999999999999999999999999999999999876666665433222 3


Q ss_pred             HhcCCCceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCCeehHHHHHHHHHHHHHHHHc
Q 012040          130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVLVKALI  205 (472)
Q Consensus       130 ~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~~i~~~~f  205 (472)
                      .++| .+++..+|+.|+++|+++.+.|+...+...+.+.+.+.++.+++.+.    ++.++|+.+.++.+++++++.++|
T Consensus        93 ~~~~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~f  171 (489)
T PLN02936         93 FLFG-SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVF  171 (489)
T ss_pred             HHhc-CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHc
Confidence            3455 58888899999999999999999877776344466777777777764    356899999999999999999999


Q ss_pred             CCCChhh--HHHHHHHHHHHHhhh-----hccCCC-CC-----ChHHHHHHHHHHHHHHHHHHHHHhhhcCCC---C---
Q 012040          206 NLDPGEQ--MEILKKQFQEFISGL-----MSLPIN-IP-----GSQLYRSLQAKKKMARLIQEIIQSKRDGGM---S---  266 (472)
Q Consensus       206 G~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~-~p-----~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~---~---  266 (472)
                      |.+.+..  ...+.+.+.......     ..++.+ ++     .+...+..++.+.+.+.+.+.++++++...   .   
T Consensus       172 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~  251 (489)
T PLN02936        172 NYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIE  251 (489)
T ss_pred             CCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            9987642  111222221111110     011110 00     112334556677777788777776543110   0   


Q ss_pred             -C---CCCcccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhh
Q 012040          267 -N---INVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQ  342 (472)
Q Consensus       267 -~---~~~~~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  342 (472)
                       .   .+...++++.+++..   ..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++++    
T Consensus       252 ~~~~~~~~~~d~l~~ll~~~---~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~----  324 (489)
T PLN02936        252 GEEYVNDSDPSVLRFLLASR---EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQ----  324 (489)
T ss_pred             cccccccCchHHHHHHHhcc---ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc----
Confidence             0   012468999998752   35899999999999999999999999999999999999999999999999976    


Q ss_pred             cCCCCChhhhcCChhHHHHHHhhhcCCCCccc-cccccccCccccCEEeCCCCEEeccchhhccCCCCCCCCCCCCCCCC
Q 012040          343 LGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW  421 (472)
Q Consensus       343 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rf  421 (472)
                       ++.++++++++||||+|||+||||++|+++. ..|.+.+|+.++||.||||+.|+++.+.+||||++|+||++|+||||
T Consensus       325 -~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRw  403 (489)
T PLN02936        325 -GRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERF  403 (489)
T ss_pred             -CCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcccc
Confidence             3457999999999999999999999999984 44556677888999999999999999999999999999999999999


Q ss_pred             CCCCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccccc
Q 012040          422 QDNKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       422 l~~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      +.++..     .+..++|||.|+|.|||++||++|+++++++|+++|+++++++
T Consensus       404 l~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~  457 (489)
T PLN02936        404 DLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPD  457 (489)
T ss_pred             CCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCC
Confidence            964321     2458999999999999999999999999999999999998764


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.1e-64  Score=488.20  Aligned_cols=392  Identities=17%  Similarity=0.218  Sum_probs=311.3

Q ss_pred             CccccchHHHHhhhccCCchHHHHHHHHhcC-CeEEEeecCcCEEEEcChhHHHHHHhcCCccccccch--hHHHHhcCC
Q 012040           58 WPIVGESLEFISCALTDRPESFMDKRRCMYG-KVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP--KSLTELMGK  134 (472)
Q Consensus        58 ~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~~~~~--~~~~~~~g~  134 (472)
                      .++.|+......     +.+.++..+.++++ .+++++.++.  ++++||+.+++++.++...|.+...  .....++|.
T Consensus        49 ~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~  121 (502)
T PLN02426         49 AYLTASWAKDFD-----NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGR  121 (502)
T ss_pred             CCccHHHHHhcc-----cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCC
Confidence            557888766443     45677777888887 6888877665  8999999999999987666654322  234466675


Q ss_pred             CceeccCChhHHHHHHHHhhcCChhHHHHHH-HHHHHHHHHHHHHhhhc------CCCeehHHHHHHHHHHHHHHHHcCC
Q 012040          135 SSILLINGGLQRRIHGLIGSFFKSADLKAQI-TRDMEKYIHKSMENWMQ------DQPIYIQDESKNIAFQVLVKALINL  207 (472)
Q Consensus       135 ~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~vd~~~~~~~~~~~~i~~~~fG~  207 (472)
                       |+++.+|+.|+++||++.+.|+...++... ...+.+..+++++.+.+      +.++|+.++++.+++|+++.++||.
T Consensus       122 -gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  200 (502)
T PLN02426        122 -GIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGL  200 (502)
T ss_pred             -ceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCC
Confidence             899999999999999999999998887632 34555555666555431      3579999999999999999999998


Q ss_pred             CChhh-----HHHHHHHHHHHHhh-----hhccC------CCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 012040          208 DPGEQ-----MEILKKQFQEFISG-----LMSLP------INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVP  271 (472)
Q Consensus       208 ~~~~~-----~~~~~~~~~~~~~~-----~~~~~------~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  271 (472)
                      +++..     ...+.+.+......     +...+      .+++....++..++.+.+.+++.+.|+++++....   ..
T Consensus       201 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~---~~  277 (502)
T PLN02426        201 DPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFS---AS  277 (502)
T ss_pred             CCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccC---Cc
Confidence            76532     12233333322110     00011      11222223455667888889999999888764321   35


Q ss_pred             ccHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhh
Q 012040          272 KDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSD  351 (472)
Q Consensus       272 ~~~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~  351 (472)
                      .|+++.+++..     .+++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.   ....+++++
T Consensus       278 ~dll~~ll~~~-----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~---~~~~~t~~~  349 (502)
T PLN02426        278 KDLLSRFMASI-----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP---NQEAASFEE  349 (502)
T ss_pred             chHHHHHHhcC-----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC---CCCCCCHHH
Confidence            79999999762     3788999999999999999999999999999999999999999999998751   224689999


Q ss_pred             hcCChhHHHHHHhhhcCCCCccccccccccCccc-cCEEeCCCCEEeccchhhccCCCCC-CCCCCCCCCCCCCCCC---
Q 012040          352 YLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPWRWQDNKD---  426 (472)
Q Consensus       352 ~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~---  426 (472)
                      +++||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|.++.+.+||||++| +||++|+||||++++.   
T Consensus       350 l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~  429 (502)
T PLN02426        350 MKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVP  429 (502)
T ss_pred             HhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCC
Confidence            9999999999999999999999778999998887 8999999999999999999999999 9999999999997432   


Q ss_pred             CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCccccc
Q 012040          427 ISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTT  468 (472)
Q Consensus       427 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~  468 (472)
                      .++..++|||+|+|.|+|++||++|++++++.++++|+++++
T Consensus       430 ~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~  471 (502)
T PLN02426        430 ENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVV  471 (502)
T ss_pred             CCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEe
Confidence            135679999999999999999999999999999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.3e-63  Score=477.14  Aligned_cols=409  Identities=17%  Similarity=0.231  Sum_probs=310.1

Q ss_pred             ccCCCCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCC-eEEEeecCcCE-------EEEcChhHHHHHHhc-
Q 012040           45 SHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGK-VFKSHIFGTPT-------IVSTDAEVSKFVLQS-  115 (472)
Q Consensus        45 ~~~~~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~dp~~i~~i~~~-  115 (472)
                      +..+.+.|||+.|||++|+.+++++.....++..++.+.++|||+ ||+++++|.++       |+++||++++.++.+ 
T Consensus        12 ~~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~   91 (480)
T PLN02648         12 SSLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVS   91 (480)
T ss_pred             CCCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecch
Confidence            344556799999999999999888755455778999999999998 99999999766       999999999999985 


Q ss_pred             ---CCccccccchhHHHHhcCCC---ceeccCChhHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHhhh----cCCC
Q 012040          116 ---DAKAFVPFYPKSLTELMGKS---SILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQP  185 (472)
Q Consensus       116 ---~~~~f~~~~~~~~~~~~g~~---~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  185 (472)
                         ++..|...++.... ++|++   +++..+|+.|+++|+++.+.|+ ..+.. +.+.+.+.++++++.|.    ++++
T Consensus        92 ~~~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~-~~~~m~~~~~~~~~~w~~~~~~~~~  168 (480)
T PLN02648         92 KVDKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRR-FIPEFRAAFAELFDTWEAELAKKGK  168 (480)
T ss_pred             hccccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhh-hhhHHHHHHHHHHHHHHHHHhhCCC
Confidence               54445555665555 88876   7777889999999999999998 56665 89999999999999994    3457


Q ss_pred             eehHHHHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHHHhhhhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 012040          186 IYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGM  265 (472)
Q Consensus       186 vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  265 (472)
                      +|+.+.+.+++++++++++||.+.+.  ..+.+.+..+...+.... .+|.        +...+...+++.+.++.....
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~-~~p~--------~~~~l~~~~~~~i~~~~~~~~  237 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQ-LAPL--------ASTGLPHVLEELLLHTFPLPF  237 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHH-hhHH--------HHcCchHHHHHHhhcccCCch
Confidence            99999999999999999999987654  223333322222211100 0000        000011111111111100000


Q ss_pred             -CCCCCcccHH-------HHHHHhcCCCCCCCHHHHHHHHHH-HHhcccCchHHHHHHHHHHHhhCHH-HHHHHHHHHHH
Q 012040          266 -SNINVPKDVI-------DVLMMNNASDQPLTDDLIADNMID-MMIPGEDSVPVLMTLAVKYLSDYPA-ALQQLTDENIK  335 (472)
Q Consensus       266 -~~~~~~~~~l-------~~ll~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~w~l~~L~~~p~-~~~~lr~Ei~~  335 (472)
                       ......++++       +.+++...+ .+++++++.++++. +.+++++||+++++|++++|++||+ +|+++++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~  316 (480)
T PLN02648        238 FLVKSDYDKLYDFFRASATEALDLAEK-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRS  316 (480)
T ss_pred             hhhhccHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence             0000111222       244433222 35999999998875 4577788888999999999999995 99999999999


Q ss_pred             HHHHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCcccc----CEEeCCCCEEeccchhhccCCCCCC
Q 012040          336 LKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIK----GYLIPKGWCFFAYFRSVHLDESNYE  411 (472)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~----g~~ip~G~~v~~~~~~~~~d~~~~~  411 (472)
                      +.+.   .++.++++++.+||||++||+|+||++|+++...|++.+|++++    ||.||||+.|+++.+.+||||++|+
T Consensus       317 ~~~~---~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~  393 (480)
T PLN02648        317 AVKA---GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFD  393 (480)
T ss_pred             Hhcc---CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCC
Confidence            8751   24568999999999999999999999999998889999999996    7999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccc---------CCCCCCCccHHHHHHHHHHHHHHHHhcCc-ccccccC
Q 012040          412 WPYQFNPWRWQDNKDISNSSFTPF---------GGGQRLCPGLDLARLEASIFLHHLVTQFS-GSTTLMW  471 (472)
Q Consensus       412 ~p~~F~P~Rfl~~~~~~~~~~~~F---------g~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~  471 (472)
                      ||++|+|+||++++......+++|         |+|+|.|+|++||+.|++++++.|+++|+ ++++.+.
T Consensus       394 dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        394 RPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            999999999987533212334444         67789999999999999999999999998 9988753


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.2e-54  Score=409.03  Aligned_cols=354  Identities=23%  Similarity=0.376  Sum_probs=298.6

Q ss_pred             HHHHHHHHhcCCeEEEeecCcC--EEEEcChhHHHHHHhcCCccccccc----hh-HHHHhcCCCceeccCChhHHHHHH
Q 012040           78 SFMDKRRCMYGKVFKSHIFGTP--TIVSTDAEVSKFVLQSDAKAFVPFY----PK-SLTELMGKSSILLINGGLQRRIHG  150 (472)
Q Consensus        78 ~~~~~~~~kyG~v~~~~~~~~~--~vvv~dp~~i~~i~~~~~~~f~~~~----~~-~~~~~~g~~~~~~~~g~~~~~~R~  150 (472)
                      .....+.+.||.+++++..+..  .+++++++.+++++.++. .+++..    .. .....+|...++..||+.|+++||
T Consensus        26 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rk  104 (411)
T COG2124          26 FFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRK  104 (411)
T ss_pred             hhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHH
Confidence            4556677889999998877765  899999999999999873 222111    11 135666765588899999999999


Q ss_pred             HHhhcCChhHHHHHHHHHHHHHHHHHHHhhhcCCCeehHHHHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHHHhhhhcc
Q 012040          151 LIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSL  230 (472)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  230 (472)
                      ++.+.|++..+.. +.+.+.+.++++++.+..+..+++.+.+..+++++++ .+||.+.++.............. .  .
T Consensus       105 l~~~~F~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-~--~  179 (411)
T COG2124         105 LLAPAFTPRALRG-YRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-L--D  179 (411)
T ss_pred             HhccccCHHHHHH-HHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-c--C
Confidence            9999999999987 9999999999999988333577799999999999999 99999887653222222222111 1  1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCcccHHHHHHHhcCCCC-CCCHHHHHHHHHHHHhcccCchH
Q 012040          231 PINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQ-PLTDDLIADNMIDMMIPGEDSVP  309 (472)
Q Consensus       231 ~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~  309 (472)
                      +...+...+.+..++..++.+++.+.|++++.+      ..+|+++.++...+++. .++++||.++++++++||+|||+
T Consensus       180 ~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~------~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa  253 (411)
T COG2124         180 PDLGPEEPWRRARAARRELDAYLRALIAERRAA------PRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTA  253 (411)
T ss_pred             cccCCcccHHHHHHHHHHHHHHHHHHHHHhccC------CcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHH
Confidence            333344456778889999999999999999843      47899999998866555 59999999999999999999999


Q ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhcCCCCChhhhcCChhHHHHHHhhhcCCCCccccccccccCccccCEE
Q 012040          310 VLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYL  389 (472)
Q Consensus       310 ~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~  389 (472)
                      ++|+|+++.|++||++++++++|.+.                    ||++++|+|+||++||++...|.+.+|++++|+.
T Consensus       254 ~~l~~a~~~L~~~P~~~~~l~~e~~~--------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~  313 (411)
T COG2124         254 NALAWALYALLRHPDQLAKLRAEPDR--------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYR  313 (411)
T ss_pred             HHHHHHHHHHHHCchHHHHHHhCcch--------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEE
Confidence            99999999999999999999998542                    8899999999999999999889999999999999


Q ss_pred             eCCCCEEeccchhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCcccccc
Q 012040          390 IPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFSGSTTL  469 (472)
Q Consensus       390 ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  469 (472)
                      ||||+.|++.++.+||||++|++|++|+|+||.       ..|+|||+|+|.|+|..||.+|++++++.+|++|++....
T Consensus       314 Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~  386 (411)
T COG2124         314 IPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLA  386 (411)
T ss_pred             eCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcC
Confidence            999999999999999999999999999999995       6789999999999999999999999999999999988765


Q ss_pred             c
Q 012040          470 M  470 (472)
Q Consensus       470 ~  470 (472)
                      +
T Consensus       387 ~  387 (411)
T COG2124         387 E  387 (411)
T ss_pred             C
Confidence            4


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=68.87  E-value=21  Score=22.07  Aligned_cols=43  Identities=16%  Similarity=0.156  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHH
Q 012040          291 DLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDEN  333 (472)
Q Consensus       291 ~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei  333 (472)
                      -++..++..++-.|.|-.+-.+.-.+....-||+....+-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            4567788888889999999999999999999999998888775


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=61.97  E-value=3.4  Score=26.77  Aligned_cols=10  Identities=40%  Similarity=1.010  Sum_probs=7.3

Q ss_pred             CCCCCCCCCC
Q 012040          417 NPWRWQDNKD  426 (472)
Q Consensus       417 ~P~Rfl~~~~  426 (472)
                      ||||||.-..
T Consensus        44 DPERWLP~~d   53 (59)
T PF08492_consen   44 DPERWLPKRD   53 (59)
T ss_pred             CccccCchhh
Confidence            7899987543


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=51.58  E-value=16  Score=23.55  Aligned_cols=23  Identities=30%  Similarity=0.523  Sum_probs=18.0

Q ss_pred             HHHHHHhhCHHHHHHHHHHHHHH
Q 012040          314 LAVKYLSDYPAALQQLTDENIKL  336 (472)
Q Consensus       314 w~l~~L~~~p~~~~~lr~Ei~~~  336 (472)
                      -++.||.+||++.+++.+.-.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeE
Confidence            46789999999999998753333


No 36 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=44.85  E-value=21  Score=27.58  Aligned_cols=22  Identities=27%  Similarity=0.603  Sum_probs=16.1

Q ss_pred             CCccHHHHHHHHHHHHHHHHhc
Q 012040          441 LCPGLDLARLEASIFLHHLVTQ  462 (472)
Q Consensus       441 ~C~G~~~a~~~~~~~l~~ll~~  462 (472)
                      .|.|++||+.++-.+|.+++..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999998853


No 37 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=44.81  E-value=64  Score=23.76  Aligned_cols=61  Identities=18%  Similarity=-0.016  Sum_probs=40.8

Q ss_pred             CCCCCCCCcCCccccchHHHHhhhccCCchHHHHHHHHhcCCeEEEeecCc------CEEEEcChhHHHHHHhc
Q 012040           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGT------PTIVSTDAEVSKFVLQS  115 (472)
Q Consensus        48 ~~~~Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~------~~vvv~dp~~i~~i~~~  115 (472)
                      ...+||--..+-++-|++.-..       .+-+-++.-+||+|..+++|..      -+||-.|-..++..+..
T Consensus        10 ~~rlppevnriLyirNLp~~IT-------seemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPFKIT-------SEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCChhhheeEEEecCCcccc-------HHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            4566776667777777654322       2445666678999999999754      36776776666666543


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=43.70  E-value=17  Score=30.61  Aligned_cols=44  Identities=25%  Similarity=0.301  Sum_probs=30.7

Q ss_pred             CChhHHHHHHhhhcCCCCccccccccccCccccCEEeCCCCEEec
Q 012040          354 SLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFA  398 (472)
Q Consensus       354 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~  398 (472)
                      .-..+.|||.|+.-+...... .=+..+|+.++|..|||||.++-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~v-rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRV-RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEE-EEEEcCceEECCEEeCCCCEEEE
Confidence            345677888888766432221 22456899999999999997765


No 39 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=37.91  E-value=69  Score=20.14  Aligned_cols=24  Identities=8%  Similarity=0.126  Sum_probs=11.2

Q ss_pred             CcchHHHHHHHhhHHHHHHHHHHH
Q 012040            1 MDNLLLILFLTAAASFFSTLILYL   24 (472)
Q Consensus         1 m~~~~~~~~~~~~~~~l~~~~~~~   24 (472)
                      |+.+.+++.+.++++++.+.+++|
T Consensus         1 M~il~~LIpiSl~l~~~~l~~f~W   24 (51)
T TIGR00847         1 MEILTILIPISLLLGGVGLVAFLW   24 (51)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHH
Confidence            555544444444444444443333


No 40 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=37.04  E-value=1.1e+02  Score=19.21  Aligned_cols=34  Identities=21%  Similarity=0.199  Sum_probs=23.8

Q ss_pred             HHHHHhcCCeEEEeecCcC----EEEEcChhHHHHHHh
Q 012040           81 DKRRCMYGKVFKSHIFGTP----TIVSTDAEVSKFVLQ  114 (472)
Q Consensus        81 ~~~~~kyG~v~~~~~~~~~----~vvv~dp~~i~~i~~  114 (472)
                      .++-.+||+|-.+.+....    +|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            4566899999999876543    555578888877765


No 41 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=33.10  E-value=70  Score=24.79  Aligned_cols=40  Identities=20%  Similarity=0.228  Sum_probs=31.1

Q ss_pred             CchHHHHHHHHhcCCeEEEeecCcCEEEEcChhHHHHHHhcC
Q 012040           75 RPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSD  116 (472)
Q Consensus        75 ~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~  116 (472)
                      +....+.+|.++||.+--..  +...+...|++.++++...+
T Consensus        75 ~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            45578999999999876532  46677789999999998765


No 42 
>PF15102 TMEM154:  TMEM154 protein family
Probab=32.86  E-value=29  Score=27.34  Aligned_cols=6  Identities=33%  Similarity=0.313  Sum_probs=2.3

Q ss_pred             HHHHHH
Q 012040           80 MDKRRC   85 (472)
Q Consensus        80 ~~~~~~   85 (472)
                      +.+|..
T Consensus       130 ldkwm~  135 (146)
T PF15102_consen  130 LDKWMN  135 (146)
T ss_pred             HHhHHH
Confidence            333443


No 43 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=32.66  E-value=32  Score=24.29  Aligned_cols=21  Identities=5%  Similarity=0.018  Sum_probs=18.3

Q ss_pred             HHHHHHHHHHHhcCccccccc
Q 012040          450 LEASIFLHHLVTQFSGSTTLM  470 (472)
Q Consensus       450 ~~~~~~l~~ll~~f~~~~~~~  470 (472)
                      ..|+-++..+|+-|+|.|.|+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            357888999999999999986


No 44 
>PRK06789 flagellar motor switch protein; Validated
Probab=29.88  E-value=52  Score=22.61  Aligned_cols=39  Identities=10%  Similarity=0.079  Sum_probs=30.0

Q ss_pred             HHHhhhcCCCCcc-ccccccccC--ccccCEEeCCCCEEecc
Q 012040          361 VITETLRMGNIII-GVMRKAMRD--IEIKGYLIPKGWCFFAY  399 (472)
Q Consensus       361 ~i~E~lRl~p~~~-~~~r~~~~d--~~l~g~~ip~G~~v~~~  399 (472)
                      -++|.+.|.+... .+-|.+-++  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            4788889988765 556777664  55689999999988775


No 45 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=29.30  E-value=2.1e+02  Score=20.28  Aligned_cols=51  Identities=14%  Similarity=0.087  Sum_probs=42.2

Q ss_pred             CCHHHHHHHHHHHHhcccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 012040          288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKE  338 (472)
Q Consensus       288 l~~~~i~~~~~~~~~ag~~tt~~~l~w~l~~L~~~p~~~~~lr~Ei~~~~~  338 (472)
                      ...+.........++-=++.++....-.+.+-++||+..+++.+.+.+-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            345566666677888889999999999999999999999999998877654


No 46 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=28.78  E-value=35  Score=28.91  Aligned_cols=21  Identities=24%  Similarity=0.268  Sum_probs=18.4

Q ss_pred             chhhccCCCCCCCCCCCCCCC
Q 012040          400 FRSVHLDESNYEWPYQFNPWR  420 (472)
Q Consensus       400 ~~~~~~d~~~~~~p~~F~P~R  420 (472)
                      .+.-|.|+.+|.|...|+|-|
T Consensus       191 W~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  191 WWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCcccccCccccCCCC
Confidence            455599999999999999988


No 47 
>PF00558 Vpu:  Vpu protein;  InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=27.81  E-value=70  Score=22.40  Aligned_cols=6  Identities=0%  Similarity=0.589  Sum_probs=2.3

Q ss_pred             HHHHHH
Q 012040           18 STLILY   23 (472)
Q Consensus        18 ~~~~~~   23 (472)
                      +.+++|
T Consensus        18 iaIvvW   23 (81)
T PF00558_consen   18 IAIVVW   23 (81)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            333333


No 48 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=27.31  E-value=1.2e+02  Score=22.63  Aligned_cols=11  Identities=18%  Similarity=-0.073  Sum_probs=7.8

Q ss_pred             CCccccchHHH
Q 012040           57 GWPIVGESLEF   67 (472)
Q Consensus        57 ~~p~~G~~~~~   67 (472)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            56888986554


No 49 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=26.54  E-value=66  Score=20.42  Aligned_cols=17  Identities=24%  Similarity=0.245  Sum_probs=15.3

Q ss_pred             cCCeEEEeecCcCEEEE
Q 012040           87 YGKVFKSHIFGTPTIVS  103 (472)
Q Consensus        87 yG~v~~~~~~~~~~vvv  103 (472)
                      -|+|++++-||+.|+|.
T Consensus         3 ~GDvV~LKSGGp~MTV~   19 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVT   19 (53)
T ss_pred             CCCEEEEccCCCCeEEE
Confidence            48999999999999986


No 50 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=26.44  E-value=2.2e+02  Score=27.75  Aligned_cols=36  Identities=19%  Similarity=0.258  Sum_probs=22.0

Q ss_pred             hcCCeEEEeecCcCEEEEcChhHHHHHHhcCCcccc
Q 012040           86 MYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFV  121 (472)
Q Consensus        86 kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~f~  121 (472)
                      +||.|+.-.+-++.+-|=.=|+.-++=+.++...|+
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            788888877766665554445554544555445554


No 51 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=26.09  E-value=1.3e+02  Score=21.05  Aligned_cols=60  Identities=17%  Similarity=0.156  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCChhhhc---CChhHHHHHHhhhcCCCCccccc--cccccCccccCE
Q 012040          324 AALQQLTDENIKLKELKAQLGEPLSWSDYL---SLPFTQNVITETLRMGNIIIGVM--RKAMRDIEIKGY  388 (472)
Q Consensus       324 ~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~---~lp~l~a~i~E~lRl~p~~~~~~--r~~~~d~~l~g~  388 (472)
                      +.|+++.+.+.++     ..+...|+.++.   ..|.--..|--+++-+|....+|  |+...+-.++||
T Consensus         2 ~f~~~V~~~l~~I-----P~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRTI-----PYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhCC-----CCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            4677888888775     256778888886   34444556666777777654433  777777777776


No 52 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=25.79  E-value=95  Score=18.09  Aligned_cols=11  Identities=18%  Similarity=0.311  Sum_probs=9.1

Q ss_pred             hCHHHHHHHHH
Q 012040          321 DYPAALQQLTD  331 (472)
Q Consensus       321 ~~p~~~~~lr~  331 (472)
                      +||++++.++.
T Consensus        25 ~HPei~~~i~~   35 (38)
T PF14483_consen   25 RHPEIQQEIRS   35 (38)
T ss_dssp             HSTHHHHHHHT
T ss_pred             hChhHHHHHHh
Confidence            79999988764


No 53 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=24.75  E-value=83  Score=25.36  Aligned_cols=38  Identities=24%  Similarity=0.359  Sum_probs=29.5

Q ss_pred             CCchHHHHHHHHhcC-CeEEEeecCc-C---EEEEcChhHHHH
Q 012040           74 DRPESFMDKRRCMYG-KVFKSHIFGT-P---TIVSTDAEVSKF  111 (472)
Q Consensus        74 ~~~~~~~~~~~~kyG-~v~~~~~~~~-~---~vvv~dp~~i~~  111 (472)
                      +...+..+++++++| +|.+++++|- |   -+|++||-.+--
T Consensus       154 GkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGv  196 (218)
T COG1707         154 GKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGV  196 (218)
T ss_pred             chHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhh
Confidence            456788999999999 9999998775 3   467788765543


No 54 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=22.23  E-value=89  Score=24.86  Aligned_cols=41  Identities=17%  Similarity=0.304  Sum_probs=25.9

Q ss_pred             cccCccccCEEeCCCCEEeccch-------hhccCCCCCCCCCCCCCCC
Q 012040          379 AMRDIEIKGYLIPKGWCFFAYFR-------SVHLDESNYEWPYQFNPWR  420 (472)
Q Consensus       379 ~~~d~~l~g~~ip~G~~v~~~~~-------~~~~d~~~~~~p~~F~P~R  420 (472)
                      ..+|+.++|..||+|+.-+....       .+|++...|.. ..|+|+.
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            34699999999999995544321       13566666643 4455543


No 55 
>PF15050 SCIMP:  SCIMP protein
Probab=21.54  E-value=1.6e+02  Score=22.25  Aligned_cols=15  Identities=40%  Similarity=0.439  Sum_probs=10.3

Q ss_pred             CCCC-CCcCCccccch
Q 012040           50 QLPL-GTLGWPIVGES   64 (472)
Q Consensus        50 ~~Pp-gp~~~p~~G~~   64 (472)
                      ++|| .|++.+..|+.
T Consensus        68 ~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   68 QLPPLPPRGSPSPEDS   83 (133)
T ss_pred             CCCCCCCCCCCCcccc
Confidence            3444 56788888875


No 56 
>PRK02302 hypothetical protein; Provisional
Probab=20.31  E-value=1.9e+02  Score=20.80  Aligned_cols=31  Identities=13%  Similarity=0.132  Sum_probs=23.8

Q ss_pred             HhcCCeEEEeecCcCEEEEcChhHHHHHHhc
Q 012040           85 CMYGKVFKSHIFGTPTIVSTDAEVSKFVLQS  115 (472)
Q Consensus        85 ~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~  115 (472)
                      ++||+|..+.-=.+-+++-+|-+.+.++..+
T Consensus        24 rkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         24 SKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            5899999885444456666899999988765


No 57 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=20.08  E-value=36  Score=27.67  Aligned_cols=30  Identities=20%  Similarity=0.553  Sum_probs=23.3

Q ss_pred             CCCCCCCC------CCCCCCCCCccccCCCCCCCccHHH
Q 012040          415 QFNPWRWQ------DNKDISNSSFTPFGGGQRLCPGLDL  447 (472)
Q Consensus       415 ~F~P~Rfl------~~~~~~~~~~~~Fg~G~r~C~G~~~  447 (472)
                      +|+|++|=      .+   +....+-|..|.-.|-|.+-
T Consensus        36 eYnP~qFpGlv~Rl~e---Pk~a~LIF~SGK~VcTGaKs   71 (185)
T COG2101          36 EYNPEQFPGLVYRLEE---PKTAALIFRSGKVVCTGAKS   71 (185)
T ss_pred             ccCHhHCCeeEEEecC---CcceEEEEecCcEEEeccCc
Confidence            79999993      22   24677889999999999654


Done!