Query 012041
Match_columns 472
No_of_seqs 212 out of 1544
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 20:27:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012041.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012041hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qtp_A Enolase 1; glycolysis, 100.0 2.8E-99 9E-104 772.3 47.6 430 43-472 5-439 (441)
2 3otr_A Enolase; structural gen 100.0 1.7E-98 6E-103 766.3 44.3 428 45-472 3-443 (452)
3 3tqp_A Enolase; energy metabol 100.0 4.9E-92 1.7E-96 728.3 46.5 410 44-467 3-420 (428)
4 3uj2_A Enolase 1; enzyme funct 100.0 7.2E-92 2.5E-96 730.3 45.2 414 43-467 25-446 (449)
5 3qn3_A Enolase; structural gen 100.0 1.5E-91 5.3E-96 722.3 43.5 403 44-461 4-411 (417)
6 2al1_A Enolase 1, 2-phospho-D- 100.0 3.8E-90 1.3E-94 717.6 45.4 426 45-472 1-433 (436)
7 2akz_A Gamma enolase, neural; 100.0 7.9E-90 2.7E-94 715.8 45.5 426 45-472 1-430 (439)
8 2ptz_A Enolase; lyase, glycoly 100.0 4.5E-83 1.5E-87 665.8 45.7 421 44-469 4-431 (432)
9 2fym_A Enolase; RNA degradosom 100.0 5.8E-81 2E-85 651.2 45.8 417 44-472 1-430 (431)
10 2pa6_A Enolase; glycolysis, ly 100.0 3.8E-79 1.3E-83 637.4 46.6 417 43-472 8-426 (427)
11 1w6t_A Enolase; bacterial infe 100.0 3E-79 1E-83 639.9 44.5 414 45-471 13-441 (444)
12 4hnl_A Mandelate racemase/muco 100.0 4.3E-51 1.5E-55 425.3 25.7 321 39-434 19-351 (421)
13 1kko_A 3-methylaspartate ammon 100.0 1.2E-50 4E-55 420.5 20.3 332 61-460 51-410 (413)
14 1kcz_A Beta-methylaspartase; b 100.0 2.7E-50 9.1E-55 418.3 17.9 327 61-460 51-410 (413)
15 3vcn_A Mannonate dehydratase; 100.0 3.8E-49 1.3E-53 410.4 26.0 319 38-434 18-357 (425)
16 3tji_A Mandelate racemase/muco 100.0 3.5E-49 1.2E-53 410.1 25.0 315 43-434 26-352 (422)
17 3sbf_A Mandelate racemase / mu 100.0 9.2E-49 3.1E-53 405.1 26.1 314 43-434 5-331 (401)
18 3fcp_A L-Ala-D/L-Glu epimerase 100.0 1.7E-48 5.8E-53 400.7 27.2 304 43-433 4-321 (381)
19 3dgb_A Muconate cycloisomerase 100.0 1.9E-48 6.6E-53 400.3 27.2 306 44-436 6-325 (382)
20 3t6c_A RSPA, putative MAND fam 100.0 2E-48 7E-53 406.2 26.9 324 34-434 14-370 (440)
21 3v3w_A Starvation sensing prot 100.0 1.7E-48 5.8E-53 405.4 26.1 313 44-434 23-356 (424)
22 3r4e_A Mandelate racemase/muco 100.0 1.7E-48 6E-53 404.8 25.5 312 44-434 17-350 (418)
23 3rcy_A Mandelate racemase/muco 100.0 3.9E-48 1.3E-52 403.3 27.5 319 44-435 2-332 (433)
24 4h1z_A Enolase Q92ZS5; dehydra 100.0 3.4E-48 1.2E-52 402.1 26.5 285 62-435 75-361 (412)
25 4hpn_A Putative uncharacterize 100.0 4.1E-48 1.4E-52 397.7 26.8 302 44-433 1-317 (378)
26 2chr_A Chloromuconate cycloiso 100.0 2.3E-48 7.8E-53 398.5 24.8 306 44-436 1-319 (370)
27 3i4k_A Muconate lactonizing en 100.0 5.2E-48 1.8E-52 397.3 27.4 308 43-437 5-326 (383)
28 2qq6_A Mandelate racemase/muco 100.0 3.6E-48 1.2E-52 402.2 25.2 323 43-434 5-338 (410)
29 4dwd_A Mandelate racemase/muco 100.0 6.5E-48 2.2E-52 397.3 26.8 310 44-435 3-319 (393)
30 2ox4_A Putative mandelate race 100.0 7.1E-48 2.4E-52 399.2 26.7 319 44-434 3-337 (403)
31 4e4u_A Mandalate racemase/muco 100.0 1.5E-47 5.1E-52 396.9 28.3 320 44-434 1-329 (412)
32 3r0u_A Enzyme of enolase super 100.0 7.1E-48 2.4E-52 395.2 25.6 305 44-440 3-322 (379)
33 4e5t_A Mandelate racemase / mu 100.0 1.3E-47 4.5E-52 396.7 27.4 324 43-434 1-336 (404)
34 3jva_A Dipeptide epimerase; en 100.0 1E-47 3.5E-52 391.2 24.4 303 44-440 1-319 (354)
35 4e4f_A Mannonate dehydratase; 100.0 1.6E-47 5.5E-52 398.1 25.8 314 43-435 22-359 (426)
36 1chr_A Chloromuconate cycloiso 100.0 1E-47 3.4E-52 393.7 23.7 305 44-436 1-319 (370)
37 3i6e_A Muconate cycloisomerase 100.0 3.1E-47 1.1E-51 391.7 26.4 302 44-436 8-323 (385)
38 4h83_A Mandelate racemase/muco 100.0 4.2E-47 1.4E-51 391.1 26.5 300 43-432 19-333 (388)
39 2gl5_A Putative dehydratase pr 100.0 4.8E-47 1.7E-51 393.8 27.0 320 44-434 3-346 (410)
40 3rr1_A GALD, putative D-galact 100.0 2.9E-47 1E-51 393.7 24.8 305 44-435 2-307 (405)
41 1wue_A Mandelate racemase/muco 100.0 1.9E-47 6.4E-52 393.8 23.2 304 44-440 20-336 (386)
42 3my9_A Muconate cycloisomerase 100.0 1.8E-47 6.1E-52 392.6 22.3 302 44-435 6-321 (377)
43 3sjn_A Mandelate racemase/muco 100.0 9.2E-47 3.1E-51 386.9 26.9 303 44-434 3-322 (374)
44 3mwc_A Mandelate racemase/muco 100.0 1.5E-46 5.1E-51 388.2 28.3 311 43-441 6-340 (400)
45 1tkk_A Similar to chloromucona 100.0 8.2E-47 2.8E-51 386.5 25.8 306 44-439 1-321 (366)
46 3mqt_A Mandelate racemase/muco 100.0 8.5E-47 2.9E-51 389.5 26.0 312 43-434 4-329 (394)
47 3qld_A Mandelate racemase/muco 100.0 4.2E-47 1.4E-51 390.8 23.5 304 44-440 1-324 (388)
48 2o56_A Putative mandelate race 100.0 8.9E-47 3.1E-51 391.4 26.1 320 43-434 3-343 (407)
49 3ik4_A Mandelate racemase/muco 100.0 9.8E-47 3.4E-51 385.3 25.6 301 43-436 4-319 (365)
50 3q45_A Mandelate racemase/muco 100.0 9.4E-47 3.2E-51 386.0 25.3 305 44-440 1-319 (368)
51 2poz_A Putative dehydratase; o 100.0 8.3E-47 2.8E-51 389.8 25.1 315 44-433 3-326 (392)
52 3gd6_A Muconate cycloisomerase 100.0 9.7E-47 3.3E-51 388.7 25.4 309 44-436 1-318 (391)
53 3tcs_A Racemase, putative; PSI 100.0 1.7E-46 5.9E-51 385.9 27.1 302 43-432 22-325 (388)
54 1nu5_A Chloromuconate cycloiso 100.0 1.5E-46 5E-51 385.1 26.4 306 44-436 1-319 (370)
55 4e8g_A Enolase, mandelate race 100.0 2.8E-46 9.7E-51 384.8 28.5 300 44-434 23-336 (391)
56 3dip_A Enolase; structural gen 100.0 1.6E-46 5.5E-51 389.1 26.5 321 43-433 3-340 (410)
57 3s5s_A Mandelate racemase/muco 100.0 9.8E-47 3.3E-51 388.2 24.6 297 43-431 4-315 (389)
58 3stp_A Galactonate dehydratase 100.0 3.2E-47 1.1E-51 394.1 20.9 306 38-431 18-352 (412)
59 3mkc_A Racemase; metabolic pro 100.0 6.5E-47 2.2E-51 390.3 23.2 311 44-434 10-334 (394)
60 3ro6_B Putative chloromuconate 100.0 3E-47 1E-51 388.1 19.9 306 44-440 1-320 (356)
61 3dg3_A Muconate cycloisomerase 100.0 2E-46 6.9E-51 383.5 26.0 296 44-431 1-310 (367)
62 3u9i_A Mandelate racemase/muco 100.0 3.3E-47 1.1E-51 392.1 20.2 307 44-435 27-348 (393)
63 3tj4_A Mandelate racemase; eno 100.0 1.2E-46 4E-51 385.8 24.2 303 44-431 1-321 (372)
64 1wuf_A Hypothetical protein LI 100.0 5E-47 1.7E-51 391.4 20.8 304 44-440 20-336 (393)
65 4dxk_A Mandelate racemase / mu 100.0 2E-46 6.7E-51 387.4 25.1 325 44-434 1-338 (400)
66 2p8b_A Mandelate racemase/muco 100.0 1.5E-46 5.1E-51 385.0 22.6 306 44-439 1-320 (369)
67 3fv9_G Mandelate racemase/muco 100.0 4.6E-46 1.6E-50 383.0 25.0 303 44-434 3-321 (386)
68 2qde_A Mandelate racemase/muco 100.0 1.4E-45 4.7E-50 381.2 27.8 301 44-433 3-317 (397)
69 2qgy_A Enolase from the enviro 100.0 1.7E-45 5.8E-50 379.8 28.2 304 44-434 11-323 (391)
70 3go2_A Putative L-alanine-DL-g 100.0 2.1E-45 7.2E-50 380.8 27.3 321 44-434 3-338 (409)
71 3toy_A Mandelate racemase/muco 100.0 8.8E-46 3E-50 380.4 23.9 295 43-430 26-334 (383)
72 3eez_A Putative mandelate race 100.0 8.7E-46 3E-50 380.0 23.7 298 44-434 3-315 (378)
73 4dye_A Isomerase; enolase fami 100.0 3.8E-46 1.3E-50 384.5 21.0 304 43-435 23-340 (398)
74 3ozy_A Putative mandelate race 100.0 1.8E-45 6E-50 379.1 25.0 297 44-430 3-320 (389)
75 3ddm_A Putative mandelate race 100.0 9.3E-46 3.2E-50 381.3 22.7 296 44-430 10-324 (392)
76 2ps2_A Putative mandelate race 100.0 4E-45 1.4E-49 374.6 26.9 298 44-434 4-317 (371)
77 2zad_A Muconate cycloisomerase 100.0 1.4E-45 4.9E-50 374.3 23.1 296 44-434 2-312 (345)
78 3vdg_A Probable glucarate dehy 100.0 2.2E-45 7.6E-50 383.0 24.9 306 44-430 28-360 (445)
79 3vc5_A Mandelate racemase/muco 100.0 3.6E-45 1.2E-49 381.3 26.2 310 43-433 22-358 (441)
80 3bjs_A Mandelate racemase/muco 100.0 5.2E-45 1.8E-49 379.9 27.3 299 44-431 39-357 (428)
81 3ugv_A Enolase; enzyme functio 100.0 1.8E-45 6.3E-50 378.8 23.0 298 43-430 27-340 (390)
82 2pp0_A L-talarate/galactarate 100.0 1.8E-45 6.2E-50 380.3 22.5 299 44-432 26-343 (398)
83 2gdq_A YITF; mandelate racemas 100.0 9.3E-45 3.2E-49 373.2 25.5 297 43-434 3-313 (382)
84 1r0m_A N-acylamino acid racema 100.0 7.5E-45 2.6E-49 373.1 24.3 299 44-436 8-318 (375)
85 1rvk_A Isomerase/lactonizing e 100.0 1.9E-44 6.4E-49 371.0 26.9 305 44-432 1-324 (382)
86 2qdd_A Mandelate racemase/muco 100.0 1.5E-44 5.2E-49 371.2 26.0 298 44-434 3-315 (378)
87 2zc8_A N-acylamino acid racema 100.0 7.8E-45 2.7E-49 372.2 23.8 299 44-436 1-311 (369)
88 3cyj_A Mandelate racemase/muco 100.0 1.4E-44 4.8E-49 370.6 25.7 290 43-430 5-310 (372)
89 2ovl_A Putative racemase; stru 100.0 4.9E-44 1.7E-48 366.5 29.6 296 44-430 2-312 (371)
90 1sjd_A N-acylamino acid racema 100.0 2.2E-44 7.6E-49 368.7 26.7 299 44-436 1-312 (368)
91 4h2h_A Mandelate racemase/muco 100.0 3.2E-44 1.1E-48 368.3 27.0 295 43-430 9-318 (376)
92 4a35_A Mitochondrial enolase s 100.0 1.2E-44 4.1E-49 377.6 24.0 301 43-428 4-371 (441)
93 3ekg_A Mandelate racemase/muco 100.0 2.1E-44 7.2E-49 370.8 25.1 273 61-431 59-334 (404)
94 3va8_A Probable dehydratase; e 100.0 1.6E-44 5.5E-49 376.6 23.9 308 43-431 26-359 (445)
95 3fxg_A Rhamnonate dehydratase; 100.0 1.2E-44 4.2E-49 376.1 21.9 273 61-431 65-339 (455)
96 2nql_A AGR_PAT_674P, isomerase 100.0 6.9E-44 2.4E-48 367.5 26.5 282 62-434 52-336 (388)
97 2pge_A MENC; OSBS, NYSGXRC, PS 100.0 1E-44 3.6E-49 372.1 19.8 296 60-440 30-345 (377)
98 2rdx_A Mandelate racemase/muco 100.0 1.7E-43 5.8E-48 363.5 28.7 298 44-434 3-315 (379)
99 2og9_A Mandelate racemase/muco 100.0 4.3E-44 1.5E-48 369.5 23.9 300 43-432 12-330 (393)
100 1mdl_A Mandelate racemase; iso 100.0 6.3E-44 2.2E-48 364.1 24.0 296 43-431 3-311 (359)
101 3mzn_A Glucarate dehydratase; 100.0 7.1E-44 2.4E-48 372.7 24.3 312 43-432 4-356 (450)
102 3p0w_A Mandelate racemase/muco 100.0 7.5E-44 2.6E-48 373.9 23.6 310 43-430 7-372 (470)
103 3pfr_A Mandelate racemase/muco 100.0 1.2E-43 4E-48 371.5 22.4 310 43-430 8-359 (455)
104 2pgw_A Muconate cycloisomerase 100.0 1.3E-43 4.4E-48 365.0 22.0 297 44-434 4-319 (384)
105 4g8t_A Glucarate dehydratase; 100.0 2.6E-43 8.9E-48 370.2 23.9 317 37-432 17-376 (464)
106 2p3z_A L-rhamnonate dehydratas 100.0 5.5E-43 1.9E-47 362.4 24.9 272 61-431 70-345 (415)
107 3ijl_A Muconate cycloisomerase 100.0 3.2E-43 1.1E-47 355.8 16.7 274 60-435 26-302 (338)
108 2hzg_A Mandelate racemase/muco 100.0 1.1E-42 3.6E-47 360.1 19.0 306 44-434 3-324 (401)
109 1tzz_A Hypothetical protein L1 100.0 2.9E-42 9.9E-47 355.8 21.0 303 44-432 6-340 (392)
110 3v5c_A Mandelate racemase/muco 100.0 1.1E-41 3.8E-46 350.7 21.8 294 44-435 12-332 (392)
111 2hxt_A L-fuconate dehydratase; 100.0 3.5E-41 1.2E-45 352.7 22.6 299 44-427 2-365 (441)
112 3p3b_A Mandelate racemase/muco 100.0 9.9E-42 3.4E-46 351.7 17.0 294 44-435 12-332 (392)
113 2oz8_A MLL7089 protein; struct 100.0 3E-40 1E-44 340.4 19.6 291 44-431 3-311 (389)
114 2okt_A OSB synthetase, O-succi 100.0 1E-40 3.5E-45 338.2 15.0 276 44-432 2-290 (342)
115 1jpd_X L-Ala-D/L-Glu epimerase 100.0 2.6E-39 9E-44 325.5 14.9 265 61-432 31-296 (324)
116 4gfi_A Mandelate racemase/muco 100.0 1.3E-35 4.3E-40 299.3 21.7 268 60-435 30-297 (329)
117 1r6w_A OSB synthase, O-succiny 100.0 1.6E-36 5.3E-41 305.0 12.5 266 45-431 2-284 (322)
118 2ozt_A TLR1174 protein; struct 100.0 6.6E-36 2.3E-40 301.6 12.8 256 60-431 28-291 (332)
119 3caw_A O-succinylbenzoate synt 100.0 5.3E-34 1.8E-38 287.5 16.0 236 60-428 26-268 (330)
120 2opj_A O-succinylbenzoate-COA 99.9 8.1E-27 2.8E-31 234.4 14.4 197 150-434 51-248 (327)
121 3hgj_A Chromate reductase; TIM 97.0 0.0042 1.4E-07 62.2 11.9 72 311-384 234-317 (349)
122 1z41_A YQJM, probable NADH-dep 96.5 0.021 7.1E-07 56.8 12.3 72 311-384 224-306 (338)
123 3kru_A NADH:flavin oxidoreduct 96.2 0.025 8.6E-07 56.4 10.8 70 312-384 226-306 (343)
124 3noy_A 4-hydroxy-3-methylbut-2 96.1 0.028 9.6E-07 55.6 10.2 98 314-415 44-142 (366)
125 3l5l_A Xenobiotic reductase A; 95.9 0.031 1.1E-06 56.2 10.1 70 313-384 243-324 (363)
126 3aty_A Tcoye, prostaglandin F2 95.9 0.036 1.2E-06 56.0 10.5 69 312-384 262-335 (379)
127 1icp_A OPR1, 12-oxophytodienoa 95.6 0.028 9.6E-07 56.8 8.4 69 313-384 253-329 (376)
128 1ps9_A 2,4-dienoyl-COA reducta 95.6 0.058 2E-06 58.5 11.5 72 311-384 223-309 (671)
129 1vyr_A Pentaerythritol tetrani 95.2 0.1 3.4E-06 52.4 10.8 69 313-384 248-322 (364)
130 2r14_A Morphinone reductase; H 94.3 0.22 7.4E-06 50.2 10.6 70 312-384 251-327 (377)
131 2gou_A Oxidoreductase, FMN-bin 94.2 0.32 1.1E-05 48.8 11.6 70 312-384 246-321 (365)
132 3gr7_A NADPH dehydrogenase; fl 93.7 0.33 1.1E-05 48.1 10.7 71 312-384 225-306 (340)
133 3gka_A N-ethylmaleimide reduct 93.6 0.23 8E-06 49.7 9.4 68 314-384 248-315 (361)
134 4ab4_A Xenobiotic reductase B; 93.6 0.24 8.1E-06 49.7 9.3 67 315-384 241-307 (362)
135 2hsa_B 12-oxophytodienoate red 92.6 0.4 1.4E-05 48.7 9.4 70 312-384 256-347 (402)
136 3lab_A Putative KDPG (2-keto-3 88.6 0.82 2.8E-05 42.2 6.7 109 314-437 23-138 (217)
137 1o94_A Tmadh, trimethylamine d 86.9 3 0.0001 45.5 11.1 42 342-384 279-320 (729)
138 1ydn_A Hydroxymethylglutaryl-C 86.8 3.2 0.00011 39.9 10.2 124 312-440 22-177 (295)
139 4af0_A Inosine-5'-monophosphat 85.7 3.6 0.00012 43.0 10.2 93 343-441 310-416 (556)
140 4g9p_A 4-hydroxy-3-methylbut-2 83.9 4.2 0.00014 40.8 9.4 99 315-417 37-148 (406)
141 3k30_A Histamine dehydrogenase 82.9 5.9 0.0002 42.8 11.1 71 311-384 239-323 (690)
142 4e38_A Keto-hydroxyglutarate-a 81.8 3 0.0001 38.9 7.1 108 314-437 44-153 (232)
143 1wa3_A 2-keto-3-deoxy-6-phosph 81.2 7.5 0.00026 34.8 9.5 108 314-437 20-130 (205)
144 1i4n_A Indole-3-glycerol phosp 78.9 11 0.00037 35.5 9.9 96 313-413 61-157 (251)
145 3l5a_A NADH/flavin oxidoreduct 78.6 11 0.00038 38.2 10.6 69 312-384 260-345 (419)
146 1f76_A Dihydroorotate dehydrog 78.5 9.3 0.00032 37.2 9.9 71 313-386 222-319 (336)
147 3tsm_A IGPS, indole-3-glycerol 77.1 15 0.00053 34.8 10.6 112 312-435 78-193 (272)
148 2e6f_A Dihydroorotate dehydrog 77.0 9.8 0.00033 36.6 9.4 42 343-386 232-274 (314)
149 3eeg_A 2-isopropylmalate synth 75.4 7.6 0.00026 38.0 8.1 129 312-443 24-176 (325)
150 3f4w_A Putative hexulose 6 pho 73.4 27 0.00092 31.1 10.9 118 314-437 11-133 (211)
151 3igs_A N-acetylmannosamine-6-p 72.4 21 0.00071 33.0 10.0 111 314-435 34-153 (232)
152 1ydo_A HMG-COA lyase; TIM-barr 72.2 28 0.00097 33.5 11.3 127 311-442 23-181 (307)
153 3tdn_A FLR symmetric alpha-bet 71.2 7.9 0.00027 35.9 6.9 93 279-384 8-107 (247)
154 1nvm_A HOA, 4-hydroxy-2-oxoval 70.8 41 0.0014 32.9 12.3 129 311-442 25-173 (345)
155 1vs1_A 3-deoxy-7-phosphoheptul 70.6 22 0.00074 33.9 9.8 92 316-414 88-181 (276)
156 2r6o_A Putative diguanylate cy 70.4 42 0.0014 31.9 12.0 78 352-435 174-258 (294)
157 1pii_A N-(5'phosphoribosyl)ant 68.9 12 0.0004 38.4 8.0 113 313-435 68-181 (452)
158 3tml_A 2-dehydro-3-deoxyphosph 68.4 11 0.00037 36.2 7.2 87 313-406 71-158 (288)
159 2c6q_A GMP reductase 2; TIM ba 68.1 29 0.00098 34.2 10.5 92 343-440 149-254 (351)
160 2cw6_A Hydroxymethylglutaryl-C 67.9 27 0.00094 33.3 10.1 125 311-440 22-178 (298)
161 1zco_A 2-dehydro-3-deoxyphosph 67.9 21 0.00072 33.7 9.1 91 316-413 73-165 (262)
162 3ffs_A Inosine-5-monophosphate 67.2 27 0.00091 35.1 10.1 91 343-439 173-276 (400)
163 2ftp_A Hydroxymethylglutaryl-C 67.0 26 0.0009 33.5 9.8 124 312-440 26-181 (302)
164 3ble_A Citramalate synthase fr 66.9 42 0.0014 32.7 11.4 124 312-440 37-191 (337)
165 3q58_A N-acetylmannosamine-6-p 66.0 31 0.0011 31.7 9.7 111 314-435 34-153 (229)
166 1vr6_A Phospho-2-dehydro-3-deo 66.0 33 0.0011 33.8 10.3 90 316-412 156-247 (350)
167 2qkf_A 3-deoxy-D-manno-octulos 65.2 20 0.00068 34.2 8.4 94 313-413 69-164 (280)
168 3rmj_A 2-isopropylmalate synth 65.1 29 0.001 34.4 9.9 128 312-442 30-181 (370)
169 3b0p_A TRNA-dihydrouridine syn 65.0 59 0.002 31.8 12.1 67 314-384 142-224 (350)
170 1vhn_A Putative flavin oxidore 64.8 4.7 0.00016 39.2 3.9 62 323-387 146-215 (318)
171 3usb_A Inosine-5'-monophosphat 63.2 54 0.0019 33.9 11.9 106 329-440 269-390 (511)
172 1jub_A Dihydroorotate dehydrog 62.3 26 0.00088 33.5 8.7 46 342-389 228-275 (311)
173 3s83_A Ggdef family protein; s 60.4 92 0.0032 28.4 12.1 78 352-435 150-234 (259)
174 2wqp_A Polysialic acid capsule 60.4 32 0.0011 33.9 9.0 89 313-409 88-177 (349)
175 3sz8_A 2-dehydro-3-deoxyphosph 60.0 23 0.00078 33.9 7.6 35 312-346 73-107 (285)
176 1o60_A 2-dehydro-3-deoxyphosph 59.8 27 0.00091 33.5 8.2 93 314-413 73-167 (292)
177 4avf_A Inosine-5'-monophosphat 58.7 58 0.002 33.5 11.1 106 329-440 240-363 (490)
178 1vrd_A Inosine-5'-monophosphat 57.2 60 0.0021 33.2 11.0 107 326-438 245-369 (494)
179 4fo4_A Inosine 5'-monophosphat 56.7 79 0.0027 31.2 11.3 92 343-440 137-242 (366)
180 3sgz_A Hydroxyacid oxidase 2; 55.2 1.6E+02 0.0053 28.9 13.0 94 341-440 204-303 (352)
181 1vc4_A Indole-3-glycerol phosp 55.0 26 0.0009 32.7 7.1 93 313-413 65-161 (254)
182 4ef8_A Dihydroorotate dehydrog 54.3 41 0.0014 33.2 8.7 44 341-386 263-307 (354)
183 3khj_A Inosine-5-monophosphate 53.5 69 0.0024 31.5 10.3 92 343-440 134-238 (361)
184 3ewb_X 2-isopropylmalate synth 53.1 90 0.0031 29.7 10.8 128 312-442 23-174 (293)
185 1vli_A Spore coat polysacchari 52.7 30 0.001 34.5 7.4 81 319-406 103-184 (385)
186 1wv2_A Thiazole moeity, thiazo 52.6 1.2E+02 0.0041 28.5 11.1 119 311-439 82-217 (265)
187 3fs2_A 2-dehydro-3-deoxyphosph 52.3 19 0.00064 34.7 5.7 35 312-346 94-128 (298)
188 4fxs_A Inosine-5'-monophosphat 52.2 93 0.0032 32.0 11.4 94 341-440 258-365 (496)
189 3zwt_A Dihydroorotate dehydrog 52.1 32 0.0011 34.1 7.5 44 342-387 284-329 (367)
190 2nwr_A 2-dehydro-3-deoxyphosph 52.1 54 0.0019 30.9 8.8 96 312-414 57-154 (267)
191 1jcn_A Inosine monophosphate d 51.9 54 0.0018 33.8 9.6 109 326-440 263-389 (514)
192 3nvt_A 3-deoxy-D-arabino-heptu 50.8 37 0.0013 33.9 7.8 94 312-413 189-284 (385)
193 1w1z_A Delta-aminolevulinic ac 50.8 72 0.0025 30.8 9.3 105 261-380 174-295 (328)
194 4a29_A Engineered retro-aldol 50.0 67 0.0023 30.1 8.9 93 313-412 64-159 (258)
195 2ekc_A AQ_1548, tryptophan syn 49.7 1E+02 0.0035 28.6 10.4 115 314-437 29-176 (262)
196 1l6s_A Porphobilinogen synthas 49.3 1E+02 0.0035 29.6 10.1 127 261-412 168-310 (323)
197 2qr6_A IMP dehydrogenase/GMP r 48.3 43 0.0015 33.2 7.9 40 342-384 199-238 (393)
198 1yxy_A Putative N-acetylmannos 48.3 1.2E+02 0.004 27.3 10.4 43 339-384 172-214 (234)
199 4a3u_A NCR, NADH\:flavin oxido 47.6 69 0.0024 31.4 9.2 67 315-384 240-314 (358)
200 3g8r_A Probable spore coat pol 45.6 66 0.0022 31.6 8.5 35 314-349 76-110 (350)
201 2w6r_A Imidazole glycerol phos 45.4 26 0.00089 32.5 5.5 67 341-409 187-253 (266)
202 3ivs_A Homocitrate synthase, m 44.4 2.6E+02 0.0088 28.1 12.9 126 311-440 56-202 (423)
203 1h7n_A 5-aminolaevulinic acid 44.4 1.5E+02 0.0051 28.8 10.5 128 261-412 183-328 (342)
204 2vp8_A Dihydropteroate synthas 44.2 1.7E+02 0.0058 28.2 11.1 110 284-417 48-171 (318)
205 1tx2_A DHPS, dihydropteroate s 44.2 1.6E+02 0.0055 28.1 10.9 95 314-416 61-169 (297)
206 1eep_A Inosine 5'-monophosphat 44.1 73 0.0025 31.7 8.9 90 343-438 182-285 (404)
207 3qja_A IGPS, indole-3-glycerol 43.3 1.3E+02 0.0045 28.2 10.1 114 313-438 72-189 (272)
208 3hv2_A Response regulator/HD d 43.1 1.3E+02 0.0044 24.3 11.8 78 314-396 46-127 (153)
209 3obk_A Delta-aminolevulinic ac 43.1 93 0.0032 30.4 8.8 128 261-412 187-331 (356)
210 1ypf_A GMP reductase; GUAC, pu 42.5 1.4E+02 0.005 28.7 10.6 106 326-439 114-240 (336)
211 1jvn_A Glutamine, bifunctional 42.4 23 0.0008 37.1 5.0 68 341-409 483-550 (555)
212 4hb7_A Dihydropteroate synthas 42.3 88 0.003 29.5 8.5 109 284-417 13-136 (270)
213 1qop_A Tryptophan synthase alp 40.9 81 0.0028 29.4 8.2 92 314-410 29-151 (268)
214 2izx_A CAMP-dependent protein 40.5 7.9 0.00027 25.4 0.7 16 27-42 21-36 (41)
215 1pv8_A Delta-aminolevulinic ac 40.5 1.6E+02 0.0053 28.5 9.9 128 261-412 172-317 (330)
216 4f3h_A Fimxeal, putative uncha 40.5 1.1E+02 0.0038 27.7 9.0 112 317-434 110-237 (250)
217 1ka9_F Imidazole glycerol phos 39.6 32 0.0011 31.5 5.1 67 341-409 183-249 (252)
218 3oix_A Putative dihydroorotate 39.6 78 0.0027 30.9 8.1 55 343-399 262-319 (345)
219 3vkj_A Isopentenyl-diphosphate 39.0 2.3E+02 0.0077 27.9 11.4 92 343-440 176-298 (368)
220 2nli_A Lactate oxidase; flavoe 38.5 1.3E+02 0.0045 29.5 9.6 94 341-440 216-315 (368)
221 3e96_A Dihydrodipicolinate syn 38.5 1.8E+02 0.0063 27.7 10.5 123 260-413 64-195 (316)
222 3vk5_A MOEO5; TIM barrel, tran 38.3 1.4E+02 0.0047 28.5 9.1 64 322-387 191-258 (286)
223 3nav_A Tryptophan synthase alp 37.9 2.2E+02 0.0075 26.7 10.7 118 314-438 32-180 (271)
224 2bas_A YKUI protein; EAL domai 37.8 3.2E+02 0.011 27.2 14.9 75 341-421 154-240 (431)
225 3q58_A N-acetylmannosamine-6-p 37.0 2.4E+02 0.0082 25.5 11.1 41 341-384 169-209 (229)
226 3r2g_A Inosine 5'-monophosphat 36.4 1.7E+02 0.0059 28.7 10.0 40 343-385 129-169 (361)
227 2cu0_A Inosine-5'-monophosphat 36.1 77 0.0026 32.4 7.7 91 343-441 257-360 (486)
228 3s1x_A Probable transaldolase; 35.2 2.6E+02 0.0089 25.4 11.7 92 314-409 65-161 (223)
229 3igs_A N-acetylmannosamine-6-p 34.6 2.6E+02 0.0089 25.3 11.3 42 340-384 168-209 (232)
230 1yxy_A Putative N-acetylmannos 34.4 1.1E+02 0.0037 27.5 7.8 108 317-435 37-157 (234)
231 1gox_A (S)-2-hydroxy-acid oxid 34.0 1.8E+02 0.0061 28.5 9.8 93 342-440 213-311 (370)
232 1tv5_A Dhodehase, dihydroorota 33.8 37 0.0013 34.5 4.8 43 343-387 360-404 (443)
233 1vzw_A Phosphoribosyl isomeras 33.2 1.4E+02 0.0049 26.8 8.5 41 344-386 65-105 (244)
234 1h5y_A HISF; histidine biosynt 33.1 55 0.0019 29.5 5.5 60 342-406 65-124 (253)
235 1wv2_A Thiazole moeity, thiazo 32.8 71 0.0024 30.0 6.1 60 323-385 149-216 (265)
236 1thf_D HISF protein; thermophI 32.7 41 0.0014 30.8 4.6 67 341-409 182-248 (253)
237 2yxb_A Coenzyme B12-dependent 32.7 2.3E+02 0.0078 24.0 9.2 87 366-456 57-146 (161)
238 1p4c_A L(+)-mandelate dehydrog 32.5 1.2E+02 0.0043 29.8 8.3 92 341-440 212-309 (380)
239 3t05_A Pyruvate kinase, PK; te 32.4 2.5E+02 0.0087 29.6 10.9 142 312-457 190-357 (606)
240 1ujp_A Tryptophan synthase alp 32.2 63 0.0022 30.4 5.8 88 344-438 81-174 (271)
241 1t3i_A Probable cysteine desul 32.2 90 0.0031 30.1 7.3 98 315-413 99-206 (420)
242 4drs_A Pyruvate kinase; glycol 32.0 1.9E+02 0.0065 30.0 9.8 139 312-453 212-382 (526)
243 2kyg_A CAMP-dependent protein 31.3 14 0.00046 25.5 0.7 17 26-42 28-44 (50)
244 1vhc_A Putative KHG/KDPG aldol 31.1 3E+02 0.01 24.8 11.0 108 314-437 27-136 (224)
245 3e9k_A Kynureninase; kynurenin 31.1 94 0.0032 30.9 7.4 98 315-412 137-250 (465)
246 2izy_A CAMP-dependent protein 30.8 14 0.00048 26.0 0.7 16 27-42 24-39 (54)
247 1wbh_A KHG/KDPG aldolase; lyas 30.3 2.9E+02 0.01 24.6 9.8 108 314-437 26-135 (214)
248 1geq_A Tryptophan synthase alp 30.1 2.1E+02 0.0073 25.7 9.1 92 262-384 120-219 (248)
249 1me8_A Inosine-5'-monophosphat 30.1 1.5E+02 0.005 30.5 8.7 93 342-440 270-383 (503)
250 3kcn_A Adenylate cyclase homol 29.7 2.1E+02 0.0073 22.8 9.5 79 314-396 35-117 (151)
251 1y0e_A Putative N-acetylmannos 29.4 66 0.0023 28.7 5.3 42 341-384 162-203 (223)
252 3f9t_A TDC, L-tyrosine decarbo 29.2 1.5E+02 0.0052 28.0 8.3 81 329-413 123-208 (397)
253 3hv8_A Protein FIMX; EAL phosp 29.2 1.2E+02 0.0042 27.8 7.3 77 352-434 164-246 (268)
254 2q02_A Putative cytoplasmic pr 29.0 2.9E+02 0.01 24.7 9.9 95 313-411 19-138 (272)
255 3nvt_A 3-deoxy-D-arabino-heptu 28.6 3.1E+02 0.011 27.1 10.4 112 314-435 154-280 (385)
256 3w01_A Heptaprenylglyceryl pho 28.2 3.3E+02 0.011 25.0 9.7 70 314-387 143-216 (235)
257 2agk_A 1-(5-phosphoribosyl)-5- 27.9 48 0.0016 31.0 4.1 46 341-387 188-238 (260)
258 1zco_A 2-dehydro-3-deoxyphosph 27.7 3.5E+02 0.012 25.0 10.2 112 314-435 35-161 (262)
259 3fdb_A Beta C-S lyase, putativ 27.6 3.3E+02 0.011 25.5 10.4 93 315-413 90-190 (377)
260 3qtg_A Pyruvate kinase, PK; TI 27.3 4.3E+02 0.015 26.8 11.3 123 312-437 178-321 (461)
261 3hvb_A Protein FIMX; EAL phosp 27.2 3.1E+02 0.011 26.9 10.4 110 320-435 292-416 (437)
262 1kmj_A Selenocysteine lyase; p 27.1 83 0.0028 30.1 5.9 98 315-413 94-201 (406)
263 1mzh_A Deoxyribose-phosphate a 26.7 1.7E+02 0.0059 26.3 7.7 67 313-382 129-201 (225)
264 2v82_A 2-dehydro-3-deoxy-6-pho 26.5 2.3E+02 0.0079 24.8 8.4 88 314-412 17-107 (212)
265 1rqb_A Transcarboxylase 5S sub 26.5 1.5E+02 0.005 30.9 7.8 126 313-441 44-198 (539)
266 3gr4_A Pyruvate kinase isozyme 26.4 3.4E+02 0.012 28.2 10.5 137 312-453 239-401 (550)
267 2ztj_A Homocitrate synthase; ( 26.2 4.1E+02 0.014 26.0 10.9 124 311-439 20-165 (382)
268 1h5y_A HISF; histidine biosynt 26.1 71 0.0024 28.7 4.9 66 342-409 186-251 (253)
269 3l21_A DHDPS, dihydrodipicolin 26.0 4.2E+02 0.014 25.0 14.6 121 260-413 67-199 (304)
270 3gg8_A Pyruvate kinase; malari 26.0 2.3E+02 0.0078 29.3 9.0 138 312-453 204-367 (511)
271 3s5o_A 4-hydroxy-2-oxoglutarat 25.8 4.2E+02 0.015 24.9 15.7 124 260-413 66-203 (307)
272 1gvf_A Tagatose-bisphosphate a 25.8 1.5E+02 0.0052 28.1 7.2 67 347-414 67-138 (286)
273 3gbx_A Serine hydroxymethyltra 25.8 80 0.0027 30.5 5.5 97 317-413 103-204 (420)
274 3n0l_A Serine hydroxymethyltra 25.7 1.2E+02 0.0042 29.1 7.0 97 317-413 98-199 (417)
275 3jr2_A Hexulose-6-phosphate sy 25.5 2.8E+02 0.0095 24.6 8.8 92 314-410 17-113 (218)
276 2nzl_A Hydroxyacid oxidase 1; 25.4 1.9E+02 0.0064 28.7 8.2 93 342-440 240-338 (392)
277 1p0k_A Isopentenyl-diphosphate 25.2 2.1E+02 0.0072 27.5 8.4 94 343-440 167-282 (349)
278 3nmy_A Xometc, cystathionine g 24.9 85 0.0029 30.9 5.6 95 316-413 92-189 (400)
279 1mxs_A KDPG aldolase; 2-keto-3 24.7 2.9E+02 0.01 24.9 8.8 108 314-437 36-145 (225)
280 1w5q_A Delta-aminolevulinic ac 24.7 3.6E+02 0.012 26.0 9.5 125 261-411 179-322 (337)
281 2yci_X 5-methyltetrahydrofolat 24.6 3.8E+02 0.013 25.0 9.8 60 348-414 72-133 (271)
282 1qo2_A Molecule: N-((5-phospho 24.6 70 0.0024 29.0 4.6 43 341-384 175-222 (241)
283 3sy8_A ROCR; TIM barrel phosph 24.3 3.5E+02 0.012 26.3 10.0 91 345-442 281-381 (400)
284 3vzx_A Heptaprenylglyceryl pho 24.3 4.1E+02 0.014 24.2 10.3 69 314-386 138-209 (228)
285 1ep3_A Dihydroorotate dehydrog 24.2 91 0.0031 29.3 5.4 42 343-386 230-271 (311)
286 3pjx_A Cyclic dimeric GMP bind 23.8 2.4E+02 0.0083 27.7 8.8 110 318-435 292-418 (430)
287 3cin_A MYO-inositol-1-phosphat 23.5 5.1E+02 0.018 25.6 10.8 54 328-382 186-244 (394)
288 3nra_A Aspartate aminotransfer 23.4 3.1E+02 0.011 26.0 9.4 95 315-413 111-219 (407)
289 4exb_A Putative uncharacterize 23.3 4.4E+02 0.015 24.5 10.2 95 313-413 130-236 (292)
290 1vzw_A Phosphoribosyl isomeras 22.9 76 0.0026 28.8 4.4 44 341-385 177-222 (244)
291 1kbi_A Cytochrome B2, L-LCR; f 22.9 2.8E+02 0.0095 28.5 9.1 91 342-440 331-434 (511)
292 2dr1_A PH1308 protein, 386AA l 22.3 3.5E+02 0.012 25.3 9.4 97 315-413 80-183 (386)
293 3khd_A Pyruvate kinase; malari 22.2 3.6E+02 0.012 27.9 9.6 138 312-453 213-376 (520)
294 1ka9_F Imidazole glycerol phos 22.2 85 0.0029 28.5 4.6 52 395-446 154-211 (252)
295 2rjn_A Response regulator rece 22.2 3E+02 0.01 21.9 10.9 79 314-397 39-121 (154)
296 1zfj_A Inosine monophosphate d 22.1 4.1E+02 0.014 26.7 10.3 92 343-440 262-367 (491)
297 3l0g_A Nicotinate-nucleotide p 21.8 2.5E+02 0.0084 26.9 7.8 86 344-441 196-282 (300)
298 1y0e_A Putative N-acetylmannos 21.8 4E+02 0.014 23.2 10.0 113 314-437 21-145 (223)
299 2yrr_A Aminotransferase, class 21.4 1.5E+02 0.005 27.6 6.3 96 315-413 61-161 (353)
300 3glc_A Aldolase LSRF; TIM barr 21.2 2.1E+02 0.007 27.3 7.2 71 369-440 130-211 (295)
301 1thf_D HISF protein; thermophI 21.1 1E+02 0.0035 28.0 5.0 53 395-447 153-211 (253)
302 1vjp_A MYO-inositol-1-phosphat 20.8 6.2E+02 0.021 25.0 10.7 62 329-391 187-253 (394)
303 1qop_A Tryptophan synthase alp 20.7 1.6E+02 0.0054 27.4 6.2 46 337-384 188-233 (268)
304 3l8a_A METC, putative aminotra 20.5 1E+02 0.0035 30.2 5.1 95 315-413 128-234 (421)
305 1s2w_A Phosphoenolpyruvate pho 20.4 5.5E+02 0.019 24.2 11.3 44 314-360 168-215 (295)
306 2y88_A Phosphoribosyl isomeras 20.3 88 0.003 28.3 4.3 43 341-384 180-224 (244)
307 2fli_A Ribulose-phosphate 3-ep 20.2 1.7E+02 0.0056 25.8 6.1 66 343-413 50-116 (220)
308 1m32_A 2-aminoethylphosphonate 20.2 1.4E+02 0.0047 27.9 5.9 96 315-413 65-168 (366)
309 2fiq_A Putative tagatose 6-pho 20.1 1.3E+02 0.0043 30.4 5.6 96 363-460 186-303 (420)
310 4fb5_A Probable oxidoreductase 20.0 1.2E+02 0.0043 29.1 5.6 66 346-415 86-154 (393)
No 1
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=100.00 E-value=2.8e-99 Score=772.34 Aligned_cols=430 Identities=61% Similarity=1.012 Sum_probs=413.3
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
.|.|++|++|+|+||+|+|||+|+|+|+ |.+|+++|||+|||.+|+.+++|+++.+|.|+++..+++.|++.|+|.|+|
T Consensus 5 ~m~I~~i~ar~ildsrGnptvev~v~~~~g~~ra~vPsgaStG~~Ea~elrd~d~~~y~Gkgv~kAv~~vn~~iap~Lig 84 (441)
T 3qtp_A 5 SMSIQKVHAREILDSRGNPTIEVEITTGKGMFRSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALLG 84 (441)
T ss_dssp TTBCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCCSCCSSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEEECCCCCEEEEEEEEECCCcEEEecccCCCCCcceeEeecCCCcccccCccHHHHHHHHHHHHHHHHhc
Confidence 3899999999999999999999999999 989999999999999999999999988999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
+|+.||+.||+.|.++|+|.+++++|.||+.|||+|+|++.|+..|+|||+|||.+.|.....+|+|++|+++||.|+++
T Consensus 85 ~~~~dQ~~iD~~m~~lDgT~nks~lGaNail~vSlAvakAaA~~~~~PLy~~l~~l~g~~~~~lPvP~~nvinGG~ha~n 164 (441)
T 3qtp_A 85 KNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAGN 164 (441)
T ss_dssp CBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCCCCBCEEEEEEEECGGGCSS
T ss_pred CChhhHHHHHHHHHhccCCCCccCCCccchhhHHHHHHHHHHHhcCCcHHHHHHhhcCCCCceeccceEeeecCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999987787667899999999999999999
Q ss_pred cccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcE
Q 012041 202 NLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIN 281 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~ 281 (472)
++++||||++|.++.++.|+++++.++|+++|+.||.|+|.....+|++|+|.|++++.++.|+.+.+|++++||+++|.
T Consensus 165 ~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~t~vgdEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i~ 244 (441)
T 3qtp_A 165 ALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAGYTGKIE 244 (441)
T ss_dssp SCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCSSHHHHHHHHHHHHHHHTCTTTCE
T ss_pred ccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCcccCCCCCCHHHHHHHHHHHHHHcCCCceEE
Confidence 99999999999999999999999999999999999999998788999999999999999999999999999999988999
Q ss_pred EEEecccccccccC-cceeecCCCC--CCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeE
Q 012041 282 IGMDVAASEFFTKD-GNYDLNFKKQ--PNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQL 357 (472)
Q Consensus 282 l~vD~~a~~~~~~~-~~y~~~~~~~--~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI 357 (472)
|++|++|++||+++ |+|+++|.++ .+|.+..+|++|++++|.+++++|+|.||||||+++|+++|++|+++++ +||
T Consensus 245 i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~I 324 (441)
T 3qtp_A 245 IAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQI 324 (441)
T ss_dssp EEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEE
T ss_pred EccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceE
Confidence 99999999999863 8999987654 3344567899999999999999999999999999999999999999996 999
Q ss_pred EeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 358 VGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 358 ~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
+|||++++++++++++|+.++||+++||++|+||||++++++++|+++|+.||++|+++||++++++|||||++++|+|.
T Consensus 325 vGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmvsHrsgETeDt~iAdLAVal~~gqIKt 404 (441)
T 3qtp_A 325 VGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGETEDTFIADLVVGLNCKQIKT 404 (441)
T ss_dssp EESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCEEEEC
T ss_pred EeccccccCHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEEeCCCCCccHhHHHHHHHHhCCCcccc
Confidence 99998889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHhhHHHHHHHHhCCccccCcCCCCC
Q 012041 438 GAPCRSERLAKYNQLLRIEEELGNVRYAGQDFRSP 472 (472)
Q Consensus 438 g~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~~~ 472 (472)
|+|+|+||++|||||||||++|+.++|.|.+||.|
T Consensus 405 Gap~rseR~aKyNqLlrIeeelg~a~~~g~~~~~~ 439 (441)
T 3qtp_A 405 GAPCRSERLCKYNQLMRIEEELGNIPYAGKNWRNS 439 (441)
T ss_dssp CCSCSHHHHHHHHHHHHHHHHHSSCCBCTTCCBCC
T ss_pred CCCcchhHHHHHHHHHHHHHHhCcCeecccccccC
Confidence 99999999999999999999999899999999997
No 2
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-98 Score=766.27 Aligned_cols=428 Identities=60% Similarity=1.004 Sum_probs=411.7
Q ss_pred eEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCC
Q 012041 45 KVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVD 123 (472)
Q Consensus 45 ~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d 123 (472)
+|++|++|+|+||+|+|||+|+|+|+ |.+|+++|||+|||.+|+.+++|+++.+|.|+++..+++.|++.|+|.|+|+|
T Consensus 3 ~I~~i~areildSrGnpTvEv~v~~~~G~~ra~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~kAv~~vn~~Iap~Lig~d 82 (452)
T 3otr_A 3 VIKDIVAREILDSRGNPTIEVDVSTEGGVFRAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALLGKD 82 (452)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTTCC
T ss_pred cceEEEEEEEEcCCCCEEEEEEEEECCccEEEeccccCCCCcceEEeecCCCcccccCccHHHHHHHHHHHHHHHHcCCC
Confidence 69999999999999999999999999 99999999999999999999999998899999999999999999999999999
Q ss_pred CCCHHHHHHHHH-HhcCCCC-----CCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCC--cceeeeeEEEeecC
Q 012041 124 IRDQAEVDAIML-EIDGTPN-----KSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTK--ELVMPVPAFNVING 195 (472)
Q Consensus 124 ~~d~e~i~~~l~-~~~~~~~-----~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~--~~~vp~~~~~~~~g 195 (472)
+.+|+.||+.|. ++|+|.+ ++++|.||+.|||+|++.+.|+..|+|||++||.+.|.. ...+|+|++|+++|
T Consensus 83 ~~dQ~~iD~~m~~~lDgT~n~~~~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~l~g~~~~~~~lPvP~~nvinG 162 (452)
T 3otr_A 83 PCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVING 162 (452)
T ss_dssp TTCHHHHHHHHHHTTTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEEEEEC
T ss_pred hHhHHHHHHHHHHHhcCCCCcccccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHHhcCCCCcceecccceEEEecC
Confidence 999999999999 8999988 899999999999999999999999999999999887765 46899999999999
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhC
Q 012041 196 GSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAG 275 (472)
Q Consensus 196 g~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g 275 (472)
|.|+++++++||||++|.++.++.|+++++.++|+++|+.||.|+|.....+|++|||.|++++.++.|+++.+|++++|
T Consensus 163 G~ha~n~l~~QEfmi~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~t~vgDEGgfap~~~~~~eaL~ll~~Ai~~aG 242 (452)
T 3otr_A 163 GEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIKAAG 242 (452)
T ss_dssp GGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCcCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccCCCCCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred CCCCcEEEEecccccccccC-cceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC
Q 012041 276 YTGKINIGMDVAASEFFTKD-GNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD 354 (472)
Q Consensus 276 ~~g~i~l~vD~~a~~~~~~~-~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~ 354 (472)
|+++|.|++|++|++||+.+ |+|+++|.++..|.+..+|++|++++|.+++++|||.||||||+++|+++|++|+++++
T Consensus 243 y~~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg 322 (452)
T 3otr_A 243 YEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTKDVG 322 (452)
T ss_dssp CTTTSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHT
T ss_pred CCceEEEccccchHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHHhhC
Confidence 98899999999999999532 89999987655555567899999999999999999999999999999999999999998
Q ss_pred --CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcC
Q 012041 355 --IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLAS 432 (472)
Q Consensus 355 --~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~ 432 (472)
+||+|||++++++++++++|+.++||+++||++|+||||++++++++|+++|+.||++|+++||+|++++|||||+++
T Consensus 323 ~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgITEalka~~lA~~~G~~vmvshrSGETeD~~iAdLaVgl~~ 402 (452)
T 3otr_A 323 EKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQVSHRSGETEDSFIADLVVGLRC 402 (452)
T ss_dssp TTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTC
T ss_pred CCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccccccHHHHHHHHHHHHHcCCeEEEeCCCCCCchhHHHHHHHHcCC
Confidence 999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCchhHHHhhHHHHHHHHhC-CccccCcCCCCC
Q 012041 433 GQIKTGAPCRSERLAKYNQLLRIEEELG-NVRYAGQDFRSP 472 (472)
Q Consensus 433 ~~i~~g~~~~~e~~~k~n~ll~i~~~l~-~~~~~~~~~~~~ 472 (472)
+|+|.|+|+|+||++|||||||||++|+ .++|.|.+||.|
T Consensus 403 gqIKtGap~rsER~aKyNqLlrIeeelg~~a~~~g~~~~~~ 443 (452)
T 3otr_A 403 GQIKSGSPCRSERLCKYNQLMRIEESLGADCVYAGESFRHP 443 (452)
T ss_dssp CEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGTTSC
T ss_pred CccccCCCcchhHHHHHHHHHHHHHHhCccceecccccCCC
Confidence 9999999999999999999999999999 899999999998
No 3
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=4.9e-92 Score=728.26 Aligned_cols=410 Identities=50% Similarity=0.841 Sum_probs=383.9
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
.+|++|++|+|+||+|+|||+|+|+|+ |.+ ++++|||++||.+|+.+++|+++++|.|+++.++++.|++.|+|.|+|
T Consensus 3 ~~i~~~~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~gkgv~~av~~v~~~iap~LiG 82 (428)
T 3tqp_A 3 ATITDINAHEILDSRANPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKGVLQAVENVNGPIRDALLG 82 (428)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBCC---CCSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred ceEEEEEEEEEEcCCCCCEEEEEEEECCCCEEEEeccccccCCcceeEeecCCCccccccccHHHHHHHHHHHHHHHhcC
Confidence 369999999999999999999999999 998 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcC-CCcceeeeeEEEeecCCccCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSG-TKELVMPVPAFNVINGGSHAG 200 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G-~~~~~vp~~~~~~~~gg~~~~ 200 (472)
+||.+|++||+.|.+++++++++++|.+|++||||||||++||.+|+|||+||| | ..+.++|+|+|++++||.|++
T Consensus 83 ~d~~~~~~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~~~pvp~~~~inGG~ha~ 159 (428)
T 3tqp_A 83 QDPRSQEEIDRIMIELDGTENKANLGANAILGVSLAVAYAAANNADLPLYRYLG---GDGGPFSMPVPMMNIINGGAHAT 159 (428)
T ss_dssp CCTTCHHHHHHHHHHHHCCTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---TTTCCCCBCEEEEEEEECC----
T ss_pred CCccCHHHHHHHHHHhcCcCCcCccchhHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeeeEEEEEecCcccCC
Confidence 999999999999999999988888999999999999999999999999999999 9 655679999999999999998
Q ss_pred CcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCC-C-
Q 012041 201 NNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYT-G- 278 (472)
Q Consensus 201 ~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~-g- 278 (472)
++++++|+|++|.++.+++++++++.++|+++|.+|+.| | ...++|++|+|.|+++++++.++.+.++++++||+ |
T Consensus 160 ~~~~~qefmi~P~ga~~~~ea~~~~~egy~~lK~~l~~~-g-~~t~vGdegg~ap~~~~~~e~l~~i~~Air~agy~~G~ 237 (428)
T 3tqp_A 160 NNLDFQEFMIVPVGAPTFAEALRYGAEVFHALKKRLVSR-G-LMSAVGDEGGFAPDLPNNEAAFELILEAIEDANYVPGK 237 (428)
T ss_dssp CCCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-T-CCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTT
T ss_pred CccchhHHhhcCcchhhHHHHHHHHHHHHHhHhhhhccc-c-cccccCCCCCcCCCcccHHHHHHHHHHHHHHhhcccCC
Confidence 889999999999999999999999999999999988877 5 35789999999999888899999999999999996 7
Q ss_pred CcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC--Ce
Q 012041 279 KINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD--IQ 356 (472)
Q Consensus 279 ~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~--~p 356 (472)
++.|++|+|+++||++ |+|+++ |+.||++|+++++.+++++|++.|||||++++|+++|++|+++++ +|
T Consensus 238 dv~l~vD~aase~~~~-g~Y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ 308 (428)
T 3tqp_A 238 DIYLALDAASSELYQN-GRYDFE--------NNQLTSEEMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQ 308 (428)
T ss_dssp TBEEEEECCGGGSEET-TEECCS--------SSCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSE
T ss_pred ceEEEEecchhhhccC-Cceecc--------ccccCHHHHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcc
Confidence 8999999999999988 999974 789999999999888899999999999999999999999999987 78
Q ss_pred EEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcc
Q 012041 357 LVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIK 436 (472)
Q Consensus 357 I~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~ 436 (472)
|+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||||++++|+|
T Consensus 309 ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H~sGEted~~iadLaVa~~~~~ik 388 (428)
T 3tqp_A 309 LVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISHRSGETEDTTIADLAVATDARQIK 388 (428)
T ss_dssp EEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCEEEE
T ss_pred eeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHcCCCccc
Confidence 89999888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHhhHHHHHHHHhC-CccccCc
Q 012041 437 TGAPCRSERLAKYNQLLRIEEELG-NVRYAGQ 467 (472)
Q Consensus 437 ~g~~~~~e~~~k~n~ll~i~~~l~-~~~~~~~ 467 (472)
.|+|+++||++|||||||||++|+ .++|.|.
T Consensus 389 ~G~p~r~er~akyn~llriee~l~~~~~~~~~ 420 (428)
T 3tqp_A 389 TGSLCRSDRVAKYNRLLQIERELNDQAPYAGK 420 (428)
T ss_dssp CCCSSSHHHHHHHHHHHHHHHHHTTSSCBCGG
T ss_pred CCCCcchhHHHHHhHHHHHHHHhCcccEecCc
Confidence 999999999999999999999999 8889883
No 4
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=7.2e-92 Score=730.32 Aligned_cols=414 Identities=51% Similarity=0.829 Sum_probs=388.9
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhccc
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV 120 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~Li 120 (472)
.|+|++|++|+|+||+|+|||+|+|+|+ |.+ ++++|+|+|||.+|+.+++|+++++|.|+++.++++.|++.|+|.|+
T Consensus 25 ~m~I~~i~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~~av~~v~~~iap~Li 104 (449)
T 3uj2_A 25 YLEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVTKAVQNINTEISEILS 104 (449)
T ss_dssp TTBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT
T ss_pred ceEEEEEEEEEEECCCCCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHHHHHHHHHHHHHHHHc
Confidence 3999999999999999999999999999 999 99999999999999999999998899999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCC
Q 012041 121 GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAG 200 (472)
Q Consensus 121 G~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~ 200 (472)
|+||.+|++||+.|.++++++++++++.+|++||||||||++||.+|+|||+||| |..++++|+|+|++++||.|++
T Consensus 105 G~d~~~~e~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~lpvp~~n~inGG~ha~ 181 (449)
T 3uj2_A 105 GMDASDIYAVDRAMIDADGTKDKSKFGANAVLAVSIACAKAAAAALGVPLYRFLG---GLNANRLPVPMMNILNGGAHAA 181 (449)
T ss_dssp TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---GGGCCBCCEECEEEEECSTTSS
T ss_pred cCCccCHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhC---CCCCCceeeeeEEEecCcccCC
Confidence 9999999999999999999888888999999999999999999999999999999 9887889999999999999998
Q ss_pred CcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCC-C-
Q 012041 201 NNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYT-G- 278 (472)
Q Consensus 201 ~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~-g- 278 (472)
++++++|+|++|.++.+++++++++.++|+++|..||.| | ...++|++|+|.|++++++++++.++++++++||+ |
T Consensus 182 ~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~-g-~~t~vGdeggfap~~~~~~e~l~~i~~AIr~agy~~G~ 259 (449)
T 3uj2_A 182 NTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSK-G-LATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPGR 259 (449)
T ss_dssp SSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-T-CCCCBCTTSCBCCCCSCHHHHHHHHHHHHHHTTCCBTT
T ss_pred CccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhc-C-CccccCCCCCcCCCccCHHHHHHHHHHHHHHhccccCC
Confidence 889999999999999999999999999999999888877 5 55689999999999988899999999999999996 7
Q ss_pred CcEEEEecccccccccC-cceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhc--CC
Q 012041 279 KINIGMDVAASEFFTKD-GNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSV--DI 355 (472)
Q Consensus 279 ~i~l~vD~~a~~~~~~~-~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~--~~ 355 (472)
++.|++|+|+++||+.+ |+|+++ +.++.||++|+++++.+++++|++.|||||++++|+++|++|++++ ++
T Consensus 260 dv~l~vD~aase~~~~~~g~Y~l~------~~~~~~t~~eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~i 333 (449)
T 3uj2_A 260 DFVLAMDAASSEWKGEKKGEYILP------KCKRKFASEELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKI 333 (449)
T ss_dssp TBEEEEECCGGGCBCSSTTEEECT------TTCCEEEHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTS
T ss_pred ceEEEEEcchhhhccccCceeecc------CcccccCHHHHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCc
Confidence 89999999999999742 789874 1245789999999988889999999999999999999999999999 69
Q ss_pred eEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 356 QLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 356 pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
||++||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||||++++|+
T Consensus 334 pI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~H~sgET~d~~iadLaVa~~~~~i 413 (449)
T 3uj2_A 334 QLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGETEDTTIADLAVALNTGQI 413 (449)
T ss_dssp EEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCCEE
T ss_pred eEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHhCCCcc
Confidence 99999987778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchhHHHhhHHHHHHHHhC-CccccCc
Q 012041 436 KTGAPCRSERLAKYNQLLRIEEELG-NVRYAGQ 467 (472)
Q Consensus 436 ~~g~~~~~e~~~k~n~ll~i~~~l~-~~~~~~~ 467 (472)
|.|+|+++||++|||||||||++|+ .++|.|.
T Consensus 414 k~G~~~r~er~akyn~llriee~l~~~~~~~~~ 446 (449)
T 3uj2_A 414 KTGAPSRSERVAKYNQLLRIEEELGDSAVYPGF 446 (449)
T ss_dssp ECCCSCSHHHHHHHHHHHHHHHHHGGGCBCCGG
T ss_pred cCCCCchhhHHHHHHHHHHHHHHhccccEeCCc
Confidence 9999999999999999999999999 8889883
No 5
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=1.5e-91 Score=722.34 Aligned_cols=403 Identities=48% Similarity=0.791 Sum_probs=384.8
Q ss_pred c-eEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhccc
Q 012041 44 A-KVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV 120 (472)
Q Consensus 44 m-~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~Li 120 (472)
| +|++|++|+|+||+|+|||+|+|+|+ |.+ ++++|||+|||.+|+.+++|++ ++|.|+++.++++.|++.|+|.|+
T Consensus 4 ~~~i~~i~~r~i~dsrG~ptvev~v~t~~g~~g~a~vpsgastg~~ea~elrd~~-~~y~gkgv~~av~~v~~~iap~Li 82 (417)
T 3qn3_A 4 MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDND-ERFGGKGVLKAVANVNETIADEIL 82 (417)
T ss_dssp CSBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCBSSCSSSCBCCCCCS-TGGGGTCCHHHHHHHHTHHHHHHT
T ss_pred CceeeEEEEEEEEcCCCCceEEEEEEECCCCEEEEecCCCCccccceeeeecCCC-ccccCccHHHHHHHHHHHHHHHHC
Confidence 5 69999999999999999999999999 998 9999999999999999999999 799999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCC
Q 012041 121 GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAG 200 (472)
Q Consensus 121 G~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~ 200 (472)
|+||.+|++||+.|.++++++++++++++|++||||||||++||.+|+|||+||| |..++++|+|++++++||.|++
T Consensus 83 G~d~~~~~~id~~m~~~dgt~~k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLG---G~~~~~lPv~~~nvinGG~ha~ 159 (417)
T 3qn3_A 83 GLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLG---GANASILPVPMCNIINGGAHAN 159 (417)
T ss_dssp TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---GGGCCEECEEEEEEEECGGGSS
T ss_pred CCCccCHHHHHHHHHHhhccCCCCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCcceeeeeeeeecCcccCC
Confidence 9999999999999999999988888999999999999999999999999999999 9877899999999999999998
Q ss_pred CcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCc
Q 012041 201 NNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKI 280 (472)
Q Consensus 201 ~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i 280 (472)
++++++|+|++|.++++++++++++.++|+++|..++.| |. ..++|++|+|.|++++.+++++.++++++++||++++
T Consensus 160 ~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~k-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~aGy~~dv 237 (417)
T 3qn3_A 160 NNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANS-GH-STALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRV 237 (417)
T ss_dssp SSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTTCTTTE
T ss_pred CcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhc-Cc-ccccCCCCCcCCCcCCHHHHHHHHHHHHHHcCCCCCc
Confidence 889999999999999999999999999999999988877 54 5789999999999888889999999999999986699
Q ss_pred EEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC--CeEE
Q 012041 281 NIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD--IQLV 358 (472)
Q Consensus 281 ~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~--~pI~ 358 (472)
.|++|+|+++||++ |+|+++ ++.||++|+++++.+++++|++.||||||+++|+++|++|+++++ +||+
T Consensus 238 ~l~vD~~ase~~~~-g~y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~ 308 (417)
T 3qn3_A 238 KIALDVASTEFFKD-GKYHME--------GKAFSSEALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLV 308 (417)
T ss_dssp EEEEECCGGGGEET-TEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEE
T ss_pred eEEEECCchhhccC-CeeecC--------CCccCHHHHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCcee
Confidence 99999999999988 999985 467899999999888899999999999999999999999999994 9999
Q ss_pred eCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccC
Q 012041 359 GDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTG 438 (472)
Q Consensus 359 ~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g 438 (472)
+||++++++++++++|+.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||||++++|+|.|
T Consensus 309 gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~sgEt~d~~iadlava~~~~~ik~G 388 (417)
T 3qn3_A 309 GDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTG 388 (417)
T ss_dssp ESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCSEEECC
T ss_pred cCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHhCCCccccC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHhhHHHHHHHHhCC
Q 012041 439 APCRSERLAKYNQLLRIEEELGN 461 (472)
Q Consensus 439 ~~~~~e~~~k~n~ll~i~~~l~~ 461 (472)
+|+++||++|||||||||++|+.
T Consensus 389 ~~~r~er~akyn~llriee~l~~ 411 (417)
T 3qn3_A 389 ALARGERTAKYNRLLEIEFESDE 411 (417)
T ss_dssp CSCSHHHHHHHHHHHHHTTTCCE
T ss_pred CCcchhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999984
No 6
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=3.8e-90 Score=717.64 Aligned_cols=426 Identities=63% Similarity=0.999 Sum_probs=403.6
Q ss_pred eEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhccc--
Q 012041 45 KVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV-- 120 (472)
Q Consensus 45 ~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~Li-- 120 (472)
.|++|++|+|+||+|+|||+|+|+|+ | + ++.+|+|++||.+|+.+++|+++++|.|+++.++++.|++.|+|.|+
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G-~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~ 79 (436)
T 2al1_A 1 AVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKA 79 (436)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CeeEEEEEEEEcCCCCcEEEEEEEECCc-eEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHC
Confidence 48999999999999999999999999 9 8 88999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCC--cceeeeeEEEeecCCcc
Q 012041 121 GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTK--ELVMPVPAFNVINGGSH 198 (472)
Q Consensus 121 G~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~--~~~vp~~~~~~~~gg~~ 198 (472)
|+||.+++.||+.|.+++++.++++++++|++||||||||++||.+|+|||+|||++.|.. ++++|+|+|++++||.|
T Consensus 80 G~d~~~~~~i~~~m~~~dgt~~~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~~~~~lpvp~~n~inGg~h 159 (436)
T 2al1_A 80 NIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSH 159 (436)
T ss_dssp TCCTTCHHHHHHHHHHHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEEEECGGG
T ss_pred CCChhhHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCcCceeeEEEEEeecCccc
Confidence 9999999999999998888877778899999999999999999999999999999888876 67899999999999999
Q ss_pred CCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCC
Q 012041 199 AGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTG 278 (472)
Q Consensus 199 ~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g 278 (472)
++++++++|+|++|.++.+++++++++.++|+++|..||.|+|....++|++|+|.|+++++++.++.++++++++|++|
T Consensus 160 a~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~~~G~~g 239 (436)
T 2al1_A 160 AGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDG 239 (436)
T ss_dssp SSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCTT
T ss_pred cCCccccccceecCcccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999999887667899999999988889999999999999999866
Q ss_pred CcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEE
Q 012041 279 KINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLV 358 (472)
Q Consensus 279 ~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~ 358 (472)
++.|++|++++++|+| ++|+++|.++..|.|+.||++|+++++.+++++|+|.||||||+++|+++|++|++++++||+
T Consensus 240 ~v~l~vD~aase~~~n-~~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~ 318 (436)
T 2al1_A 240 KVKIGLDCASSEFFKD-GKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIV 318 (436)
T ss_dssp TCEEEEECCGGGGEET-TEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEE
T ss_pred ceEEEEechhhhhccC-CceEEecccccccccccCCHHHHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEE
Confidence 7999999999999988 999887655445568999999999999999999999999999999999999999999999999
Q ss_pred eCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccC
Q 012041 359 GDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTG 438 (472)
Q Consensus 359 ~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g 438 (472)
+||++++++++++++|+.+++|+++||++|+||||++++++++|+++|+.+|++|+++||++++++|||+++.++++|.|
T Consensus 319 gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~sh~sgEt~~~~iA~lava~~~~~ik~G 398 (436)
T 2al1_A 319 ADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQIKTG 398 (436)
T ss_dssp ESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCSEEECC
T ss_pred ECCcccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEEecCCCchHHHHHHHHHHHhcCCcCcCC
Confidence 99987789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHhhHHHHHHHHhC-CccccCcCCCCC
Q 012041 439 APCRSERLAKYNQLLRIEEELG-NVRYAGQDFRSP 472 (472)
Q Consensus 439 ~~~~~e~~~k~n~ll~i~~~l~-~~~~~~~~~~~~ 472 (472)
+|+++||++|||||||||++|+ .+.|.|.+||.|
T Consensus 399 ~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 433 (436)
T 2al1_A 399 APARSERLAKLNQLLRIEEELGDNAVFAGENFHHG 433 (436)
T ss_dssp CSCSHHHHHHHHHHHHHHHHHGGGEEECGGGCTTG
T ss_pred CCccchHHHHHHHHHHHHHHhccccEeCccccCCC
Confidence 9999999999999999999999 899999999976
No 7
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=7.9e-90 Score=715.83 Aligned_cols=426 Identities=68% Similarity=1.135 Sum_probs=402.8
Q ss_pred eEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhccc--C
Q 012041 45 KVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV--G 121 (472)
Q Consensus 45 ~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~Li--G 121 (472)
+|++|++|+|+||+|+|||+|+|+|+ |+-++++|+|+|||+||+.+++|+++.+|.|+++.++++.|++.|+|.|+ |
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G~G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~av~~v~~~iap~Li~~G 80 (439)
T 2akz_A 1 SIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSG 80 (439)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHC
T ss_pred CeeEEEEEEEEcCCCCceEEEEEEECCCceEeeccCCCceeEEEEeeccCCCccccCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999999999 88668999999999999999999887789999999999999999999999 9
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
+||.+++.||+.|.+++++.++++++++|++||||||||++||.+|+|||+|||+++|..++++|+|+|++++||.|+++
T Consensus 81 ~d~~~~~~i~~~m~~~dgt~~~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~~~~~lpvp~~~~inGg~ha~~ 160 (439)
T 2akz_A 81 LSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGN 160 (439)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEECGGGSSS
T ss_pred CChhhHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCceeEEEEEEEecCcccccc
Confidence 99999999999999988887778889999999999999999999999999999999897777899999999999999988
Q ss_pred cccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcE
Q 012041 202 NLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIN 281 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~ 281 (472)
+++++|+|++|.++.+++++++++.++|+++|..||.|+|....++|++|+|.|+++++++.++.++++++++|++|++.
T Consensus 161 ~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~G~~g~v~ 240 (439)
T 2akz_A 161 KLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIV 240 (439)
T ss_dssp SCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHHTCTTTCE
T ss_pred ccccccceecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHcCCccceE
Confidence 99999999999999999999999999999999999999987777899999999988889999999999999999866799
Q ss_pred EEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCC
Q 012041 282 IGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDD 361 (472)
Q Consensus 282 l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE 361 (472)
|++|++++++|+| ++|++++..| .|.|+.||++|+++++.+++++|+|.||||||+++|+++|++|++++++||++||
T Consensus 241 l~vD~a~se~~~~-g~y~l~~~~~-~~~~~~~t~~e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE 318 (439)
T 2akz_A 241 IGMDVAASEFYRD-GKYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDD 318 (439)
T ss_dssp EEEECCGGGGEET-TEECTTTTSS-CCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEEST
T ss_pred EEEechHhhhccC-CeeEEecccc-ccccccCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCC
Confidence 9999999999988 8998865433 3457899999999999999999999999999999999999999999999999999
Q ss_pred ccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCCCC
Q 012041 362 LLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPC 441 (472)
Q Consensus 362 ~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~~ 441 (472)
++++++++++++++.+++|++|||++|+||||++++++++|+++|+.+|++|+++||++++++|||+|+.++++|.|.++
T Consensus 319 ~~vt~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~sh~~gEt~~~~iA~lava~~~~~ik~G~~~ 398 (439)
T 2akz_A 319 LTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPC 398 (439)
T ss_dssp TTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCSEEECCCSC
T ss_pred CccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEeecCCCccHHHHHHHHHHHhcCCcccCCCCc
Confidence 87789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHhhHHHHHHHHhC-CccccCcCCCCC
Q 012041 442 RSERLAKYNQLLRIEEELG-NVRYAGQDFRSP 472 (472)
Q Consensus 442 ~~e~~~k~n~ll~i~~~l~-~~~~~~~~~~~~ 472 (472)
++||++|||+|||||++|+ ++.|.|.+||.|
T Consensus 399 r~er~~kyn~llriee~l~~~~~~~~~~~~~~ 430 (439)
T 2akz_A 399 RSERLAKYNQLMRIEEELGDEARFAGHNFRNP 430 (439)
T ss_dssp SHHHHHHHHHHHHHHHHHGGGCCBCGGGTTCG
T ss_pred cchhHHHHHHHHHHHHHhccCcEecCccCCCc
Confidence 9999999999999999998 889999999987
No 8
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=4.5e-83 Score=665.82 Aligned_cols=421 Identities=61% Similarity=0.974 Sum_probs=389.8
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
|+|++|++++|.+++++|+|+|+|+|+ | + .+.+|++++||..|+.+++|+++++|.|+++.++++.|++.|+|.|+|
T Consensus 4 m~I~~i~~~~v~~~~~~p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~LiG 82 (432)
T 2ptz_A 4 MTIQKVHGREVLDSRGNPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALIG 82 (432)
T ss_dssp TSCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CEEEEEEEEEEecCCCCcEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCcccccccccHHHHHHHHHHHHHHHHCC
Confidence 899999999999999999999999999 9 8 888999999999999999999988999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
+||.+++.||+.|.+++++.++++++.+|++||||||||++||.+|+|||+|||+++|..+.++|+|+|++++||.|+++
T Consensus 83 ~d~~~~~~i~~~m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~G~~~~~~pvp~~~~i~gg~~a~~ 162 (432)
T 2ptz_A 83 RDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHAGN 162 (432)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEEEEEEECSTTSSS
T ss_pred CChhhHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccCCCCcCCceeEEEEecCcccccC
Confidence 99999999999999888887777888999999999999999999999999999988887666799999999999988877
Q ss_pred cccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcE
Q 012041 202 NLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIN 281 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~ 281 (472)
.++++++|++|.++.+++++++++.++|+++|..++.|+|.....+|++|+|.|++++.++.++.+.++++++|++|++.
T Consensus 163 ~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~Air~~G~~g~v~ 242 (432)
T 2ptz_A 163 ALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGKFA 242 (432)
T ss_dssp SCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHTTCTTSCE
T ss_pred CCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHHHHHHhCCcCCcE
Confidence 78899999999999999999999999999999888888887657899999999988777888998788899888766899
Q ss_pred EEEecccccccccC-cceeecCCCCCCCC-CCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhc--CCeE
Q 012041 282 IGMDVAASEFFTKD-GNYDLNFKKQPNDG-AHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSV--DIQL 357 (472)
Q Consensus 282 l~vD~~a~~~~~~~-~~y~~~~~~~~~~~-n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~--~~pI 357 (472)
|++|+|++.+|+++ ++|++.+. |. ++.|++.++++++.+++++|++.|||||++++|+++|++|++++ ++||
T Consensus 243 l~vDan~~~~~~~~~~~y~~~~~----~~~~~~~~a~~~~~~~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI 318 (432)
T 2ptz_A 243 ICMDCAASETYDEKKQQYNLTFK----SPEPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQI 318 (432)
T ss_dssp EEEECCGGGGEETTTTEEETTTT----SSSCCEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEE
T ss_pred EEEECcccccccccCceeEeecc----ccccCCCCHHHHHHHHHHHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeE
Confidence 99999999888643 67876321 11 46689999999998999999999999999999999999999999 7999
Q ss_pred EeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 358 VGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 358 ~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||+|++++++|.
T Consensus 319 ~gDe~~v~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~g~~v~~~h~~get~~~~~a~lava~~~~~ik~ 398 (432)
T 2ptz_A 319 VGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVALGSGQIKT 398 (432)
T ss_dssp EESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCSEEEC
T ss_pred EecCcccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCccHHHHHHHHHHHhCCCCCCC
Confidence 99998788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHhhHHHHHHHHhC-CccccCcCC
Q 012041 438 GAPCRSERLAKYNQLLRIEEELG-NVRYAGQDF 469 (472)
Q Consensus 438 g~~~~~e~~~k~n~ll~i~~~l~-~~~~~~~~~ 469 (472)
|+++++||++|||||||||++|+ .+.|.|++|
T Consensus 399 G~~~r~er~~kyn~llrie~~l~~~~~~~~~~~ 431 (432)
T 2ptz_A 399 GAPCRGERTAKLNQLLRIEEELGAHAKFGFPGW 431 (432)
T ss_dssp CSSCSHHHHHHHHHHHHHHHHHCTTCEESCGGG
T ss_pred CCCccchhHHHHHHHHHHHHHhccCcCccCCCC
Confidence 99999999999999999999998 888998876
No 9
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=5.8e-81 Score=651.22 Aligned_cols=417 Identities=52% Similarity=0.836 Sum_probs=387.7
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
|+|++|++++|++++++++|+|+|+|+ |++ ++++|+++++|..|+.+++|+++++|.|+++.++++.|++.|+|.|+|
T Consensus 1 ~~I~~v~~~~v~~srg~~~v~V~v~td~G~~Gge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~~~~~~~i~~~l~p~LiG 80 (431)
T 2fym_A 1 SKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIG 80 (431)
T ss_dssp CBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred CeeEEEEEEEEEcCCCCeeEEEEEEECCCCccceecCcccccCcccceeccCCcccccccccHHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999 998 899999999999999999999988999999999999999889999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcce----eeeeEEEeecCCc
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELV----MPVPAFNVINGGS 197 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~----vp~~~~~~~~gg~ 197 (472)
+||.++++||+.|.+++++.+++.++.+|++||||||||++||.+|+|||+||| |..+++ +|+|+|++++||.
T Consensus 81 ~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~~~~~~pv~~~~~~~gg~ 157 (431)
T 2fym_A 81 KDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIA---ELNGTPGKYSMPVPMMNIINGGE 157 (431)
T ss_dssp SBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHH---HHTTCTTCCCCCEECEEEEECGG
T ss_pred CCHHHHHHHHHHHHHhhCCCcccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhc---CcccccccccccceeEeeccCcc
Confidence 999999999999998887766677888999999999999999999999999999 865555 9999999999999
Q ss_pred cCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCC
Q 012041 198 HAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYT 277 (472)
Q Consensus 198 ~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~ 277 (472)
|+++.++++++|++|.+++.++++.+.+.++|+++|..++.+ |.. .++|++|+|.|+++++.+.+++||++++++|++
T Consensus 158 ~~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~-g~~-~kvG~~gg~~~~~~~d~~~l~~vreai~~~g~~ 235 (431)
T 2fym_A 158 HADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAK-GMN-TAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYE 235 (431)
T ss_dssp GSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TCC-CCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCC
T ss_pred ccccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhc-Ccc-cccCcccCCCCCccchHHHHHHHHHHHHHhccC
Confidence 987778899999999878899999999999999999888866 533 678889999999998999999999999999998
Q ss_pred -C-CcEEEEecccccccccCcceeecCCCCCCCCC-CccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhc-
Q 012041 278 -G-KINIGMDVAASEFFTKDGNYDLNFKKQPNDGA-HVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSV- 353 (472)
Q Consensus 278 -g-~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n-~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~- 353 (472)
| ++.|++|+++++||++ ++|++.. .| +.||.+++++++.++.++|++.|||||++++|+++|++|++++
T Consensus 236 ~G~dv~l~vDaaas~~~~~-~~Y~~~~------~n~~~~t~~~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~~ 308 (431)
T 2fym_A 236 LGKDITLAMDCAASEFYKD-GKYVLAG------EGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLG 308 (431)
T ss_dssp BTTTBEEEEECCGGGGEET-TEEEEGG------GTTEEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHT
T ss_pred CCCccEEEEeechhhcccc-Cceeecc------CCCCCCCHHHHHHHHHHHHHhCCceEEECCCCcccHHHHHHHHHHhC
Confidence 6 7999999999999988 9998752 36 8899999999977754459999999999999999999999999
Q ss_pred -CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcC
Q 012041 354 -DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLAS 432 (472)
Q Consensus 354 -~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~ 432 (472)
++||++||.+++++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+++||.+++++|||+++.+
T Consensus 309 ~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~la~a~~~ 388 (431)
T 2fym_A 309 DKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAA 388 (431)
T ss_dssp TTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTC
T ss_pred CCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHHHHHhcCC
Confidence 7999999955789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCchhHHHhhHHHHHHHHhC-CccccC-cCCCCC
Q 012041 433 GQIKTGAPCRSERLAKYNQLLRIEEELG-NVRYAG-QDFRSP 472 (472)
Q Consensus 433 ~~i~~g~~~~~e~~~k~n~ll~i~~~l~-~~~~~~-~~~~~~ 472 (472)
+++++|+++++||++|||+|||||++|+ .+.|.| .+||.|
T Consensus 389 ~~i~~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~ 430 (431)
T 2fym_A 389 GQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQ 430 (431)
T ss_dssp EEEECCCSCSHHHHHHHHHHHHHHHHHGGGSCCCGGGGSTTC
T ss_pred CccccCCCccchHHHHHHHHHHHHHHhccCceecChhhccCC
Confidence 9999999999999999999999999998 888998 889986
No 10
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.8e-79 Score=637.39 Aligned_cols=417 Identities=59% Similarity=0.950 Sum_probs=386.6
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhccc
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV 120 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~Li 120 (472)
.|||++|+++.+.++.++++|+|+|+|| |++ .+++|++++||.+|+.+++|+++ +|.++++.+++..|++.|+|.|+
T Consensus 8 ~MkI~~i~~~~v~~s~g~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~-~~~g~~~~~~~~~i~~~l~p~Li 86 (427)
T 2pa6_A 8 RFEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEK-RFGGKGVLMAVENVNSIIRPEIL 86 (427)
T ss_dssp GGBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSS-GGGGTCCHHHHHHHHHTHHHHHT
T ss_pred CCEEEEEEEEEEEcCCCCceEEEEEEECCCCeeeEecccccccCcceeEeecCCcc-ccccccHHHHHHHHHHHHHHHHc
Confidence 4999999999999998899999999999 998 66899999999999999999875 89999999999999889999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCC
Q 012041 121 GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAG 200 (472)
Q Consensus 121 G~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~ 200 (472)
|+||.++++||+.|.+++++.+++.++.+|++||||||||+.||.+|+|||+||| |..++++|+|++++++||.|++
T Consensus 87 G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLG---g~~~~~vp~~~~~~~~gg~~~~ 163 (427)
T 2pa6_A 87 GYDARMQREIDTIMIELDGTPNKSRLGANAILAVSLAVAKAAAATAKIPLYKYLG---GFNSYVMPVPMMNVINGGKHAG 163 (427)
T ss_dssp TCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---CSCCCEECEECEEEEECSTTTS
T ss_pred CCCHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHHHHHHhCCcHHHHhc---Cccccccccchhcccccccccc
Confidence 9999999999999988766655556778999999999999999999999999999 9767789999988888888877
Q ss_pred CcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCc
Q 012041 201 NNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKI 280 (472)
Q Consensus 201 ~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i 280 (472)
+.++++++|+.|.+++.++++.+...+||+++|..+|.|+|....++|++|++.++++.+.+++++||++++.+|++|++
T Consensus 164 ~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~~G~~~~~ 243 (427)
T 2pa6_A 164 NDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYEDEV 243 (427)
T ss_dssp SSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHTCTTTC
T ss_pred CCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHHhCCCCCc
Confidence 77889999999988889999999999999999988888888776778899999888888899999999999988754479
Q ss_pred EEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeC
Q 012041 281 NIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGD 360 (472)
Q Consensus 281 ~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~d 360 (472)
.|++|+|+++||+| +.|+++ |+.||++++++++.+++++|++.|||||++++|+++|++|++++++||++|
T Consensus 244 ~L~vDa~as~~~~n-~~~~~~--------n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~d 314 (427)
T 2pa6_A 244 VFALDAAASEFYKD-GYYYVE--------GKKLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVGD 314 (427)
T ss_dssp EEEEECCGGGGEET-TEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEES
T ss_pred EEEEEcchhccccC-Cceeec--------CCCCCHHHHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhCCCeEEeC
Confidence 99999999999988 999874 789999999999887899999999999999999999999999999999999
Q ss_pred CccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 361 DLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 361 E~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
|++++++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+++||.+++++|+|++..++++++|++
T Consensus 315 E~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~~es~i~~aa~l~~a~~~~~~~~G~~ 394 (427)
T 2pa6_A 315 DLFVTNVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRSGETEDTTIADLSVALNSGQIKTGAP 394 (427)
T ss_dssp TTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCSSCCSCCHHHHHHHHTTCSEEECCSS
T ss_pred ccccCCHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCChHHHHHHHHHHhCCCccccCCC
Confidence 98778899999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCchhHHHhhHHHHHHHHhCCccccCcCCCCC
Q 012041 441 CRSERLAKYNQLLRIEEELGNVRYAGQDFRSP 472 (472)
Q Consensus 441 ~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~~~ 472 (472)
+++||++|||||||||++|+++.|.+.+||.|
T Consensus 395 ~~~er~~kyn~llri~~~~~~~~~~~~~~~~~ 426 (427)
T 2pa6_A 395 ARGERTAKYNQLIRIEQELGLSKYAGRNFRCP 426 (427)
T ss_dssp CSHHHHHHHHHHHHHHHHSSSCEECGGGCSCC
T ss_pred cchhHHHHHHHHHHHHHHhcccccccccccCC
Confidence 99999999999999999998888998888876
No 11
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=3e-79 Score=639.91 Aligned_cols=414 Identities=50% Similarity=0.852 Sum_probs=380.4
Q ss_pred eEEEEEEEEEecCCCCCeEEEEEEEC-Cee-eeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCC
Q 012041 45 KVKSVKARQIIDSRGNPTVEVDLITD-DLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGV 122 (472)
Q Consensus 45 ~I~~V~~~~v~~~~~~~~v~V~I~td-G~~-~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~ 122 (472)
.|++|++|+|+||+|+++|+|+|+|| |++ ++++|++++||..|+.+++|+++++|.|+++.++++.|++.|+|.|+|+
T Consensus 13 ~i~~~~~r~i~dsrg~~~v~V~V~td~G~~Gge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~~a~~~i~~~l~p~LiG~ 92 (444)
T 1w6t_A 13 IITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAIIGY 92 (444)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTTS
T ss_pred hcceeEEEEEEcCCCCceEEEEEEECCCCEeeEecccccccccceeeeeccCcccccccccHHHHHHHHHHHHHHHHcCC
Confidence 69999999999999999999999999 998 8899999999999999999999889999999999999998999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCc
Q 012041 123 DIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNN 202 (472)
Q Consensus 123 d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~ 202 (472)
||.+++.||+.|.+++++.+++.++.+|++||||||||++||.+|+|||+||| |..++++|+|++++++||.|+++.
T Consensus 93 d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~vp~~~~~~~~gg~~a~~~ 169 (444)
T 1w6t_A 93 DVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLG---GFNTKVLPTPMMNIINGGSHSDAP 169 (444)
T ss_dssp BTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---CTTCCEECEECEEEEECGGGCSSS
T ss_pred CHHHHHHHHHHHHHhhCCCccccchhHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCcccccccccceeccccccccc
Confidence 99999999999998777766667888999999999999999999999999999 976778999998888888888778
Q ss_pred ccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCC-C-Cc
Q 012041 203 LAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYT-G-KI 280 (472)
Q Consensus 203 l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~-g-~i 280 (472)
++++|+|++|.+++.++++++.+.++|+++|..+|.| |. ..++|++|+|.++++.+.+.+++||++++++||. | ++
T Consensus 170 l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~k-g~-~~kvG~~gg~~~~~~~d~~~l~avreav~~agy~pG~dv 247 (444)
T 1w6t_A 170 IAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGKDV 247 (444)
T ss_dssp CCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTTB
T ss_pred cchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhc-CC-ccccCCCCCCCCchHhHHHHHHHHHHHHHHhccCCCCCc
Confidence 8999999999888899999999999999999888877 54 3678889999888888899999999999999987 6 79
Q ss_pred EEEEecccccccc--cCcceeecCCCCCCCCCCc-----cCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhc
Q 012041 281 NIGMDVAASEFFT--KDGNYDLNFKKQPNDGAHV-----LSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSV 353 (472)
Q Consensus 281 ~l~vD~~a~~~~~--~~~~y~~~~~~~~~~~n~~-----~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~ 353 (472)
.|++|+++++||+ | ++|+++ .|++ ||++++++++.++.++|++.|||||++++|+++|++|++++
T Consensus 248 ~L~vDaaas~~~~~~n-~~y~~~-------~n~~~~~~~~t~~eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~ 319 (444)
T 1w6t_A 248 FLGFDCASSEFYDKER-KVYDYT-------KFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERL 319 (444)
T ss_dssp EEEEECCGGGGBC--C-CCEETH-------HHHCTTCCEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHH
T ss_pred EEEEEccchhcccccC-Cceeec-------cccCcccCCCCHHHHHHHHHHHHHhCCcEEEECCCChhhHHHHHHHHHhh
Confidence 9999999999997 6 888752 1344 99999999987766679999999999999999999999999
Q ss_pred --CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 354 --DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 354 --~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
++||++||++++++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+++||.+++++|||+++.
T Consensus 320 ~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~~h~~get~i~~~a~lava~~ 399 (444)
T 1w6t_A 320 GKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATN 399 (444)
T ss_dssp TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTT
T ss_pred CCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEecCCCCCchHHHHHHHHHhcC
Confidence 799999997678999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred CCCcccCCCCCchhHHHhhHHHHHHHHhC-CccccC-cCCCC
Q 012041 432 SGQIKTGAPCRSERLAKYNQLLRIEEELG-NVRYAG-QDFRS 471 (472)
Q Consensus 432 ~~~i~~g~~~~~e~~~k~n~ll~i~~~l~-~~~~~~-~~~~~ 471 (472)
++++++|+|+++||++|||||||||++|+ ++.|.+ .+||+
T Consensus 400 ~~~i~~G~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 441 (444)
T 1w6t_A 400 AGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAEYRGLKSFYN 441 (444)
T ss_dssp CCEEECCCSSSHHHHHHHHHHHHHHHHHGGGCEECGGGGCTT
T ss_pred CCcccCCCCcccccHHHHHHHHHHHHHhccccccCChhhhcc
Confidence 99999999999999999999999999998 888988 77864
No 12
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=100.00 E-value=4.3e-51 Score=425.34 Aligned_cols=321 Identities=17% Similarity=0.228 Sum_probs=240.3
Q ss_pred hcCC--CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhh
Q 012041 39 TASS--SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDIL 115 (472)
Q Consensus 39 ~~~~--~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~l 115 (472)
||.+ +++||+|+++.|... +.+.|+|+|+|| |+ +||||+.. .+.+ .++...|++.|
T Consensus 19 yfqsm~~~~It~v~~~~v~~~-~~~~vlV~v~Td~G~----------~G~GEa~~-------~~~~---~~~~~~i~~~l 77 (421)
T 4hnl_A 19 YFQSMTPTIITDVKSFAIKPD-RHNLVVVKVETNKGI----------SGLGCSTF-------QFRP---LAVKTVVDEYL 77 (421)
T ss_dssp --CCCCCCBEEEEEEEEECSS-SSCEEEEEEEETTSC----------CEEEECCC-------TTSH---HHHHHHHHHTH
T ss_pred eecccCCceEEEEEEEEECCC-CceEEEEEEEECCCC----------EEEEeccC-------CCCH---HHHHHHHHHHH
Confidence 6655 488999999888544 456799999999 99 89999742 2333 34556678899
Q ss_pred hhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecC
Q 012041 116 GPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVING 195 (472)
Q Consensus 116 ap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 195 (472)
+|.|+|+||.+++++|+.|... ..++.+.+..+|++||||||||++||.+|+|||+||| |+.++++|+ |+++.+
T Consensus 78 ap~LiG~dp~~ie~i~~~~~~~-~~~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~v~~--y~~~~~ 151 (421)
T 4hnl_A 78 RPLLMGRDANEIEDIWQVMNVN-SYWRNGPITNNAISGIDMALWDIKGQLADMPLYQLLG---GKARTAIPA--YTHAVA 151 (421)
T ss_dssp HHHHTTCBTTCHHHHHHHHHHT-TSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEEE--EEEEEE
T ss_pred HHHHCCCChhhHHHHHHHHHhh-ccccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcC---CccCcccce--ecccCC
Confidence 9999999999999999999752 3344444556899999999999999999999999999 988888887 554322
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCccc----CCCCCCCCC----CCCCcHHHHHHH
Q 012041 196 GSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACN----VGDEGGFAP----NVQDNREGLVLL 267 (472)
Q Consensus 196 g~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~----~~~~G~~~~----~~~~~~~~l~~v 267 (472)
+ +. ++..+++.+...+||+++| .|+|..... ...+..+.. ..+..++.++.+
T Consensus 152 ~-------~~---------~~~~~~a~~~~~~G~~~~K----~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v 211 (421)
T 4hnl_A 152 D-------NL---------DDLYHEIDRFLAAGYRYIR----CQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMF 211 (421)
T ss_dssp S-------SH---------HHHHHHHHHHHHTTCSEEE----EEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHH
T ss_pred C-------CH---------HHHHHHHHHHHHhhHHHHh----hccccccCCchhccccccccccccccchhHHHHHHHHH
Confidence 1 11 2345666667777887665 666642211 001111110 001123344444
Q ss_pred HHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHH
Q 012041 268 TDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 268 ~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~ 347 (472)
+.+.++.| .++.|++|+ |+.||.++++++ .+.+++|++.|||||++++|+++|+
T Consensus 212 ~avR~a~G--~~~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~ 265 (421)
T 4hnl_A 212 AAIKEKYG--NQFQMLHDV-----------------------HERLHPNQAIQF-AKAAEPYQLFFLEDILPPDQSHWLT 265 (421)
T ss_dssp HHHHHHHT--TSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSCGGGGGGHH
T ss_pred HHHHHHhC--CCceEeccc-----------------------cccCCHHHHHHH-HHHhhhhhhcccccCCcccchHHHH
Confidence 44444443 289999999 356889999988 5668999999999999999999999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC-ChhhHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGE-TEDNFIADL 426 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~E-t~~s~~a~l 426 (472)
+|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++|+ .|.+.+ +.++.++.+
T Consensus 266 ~l~~~~~ipIa~dE~-~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~-~h~~~~~s~i~~aa~~ 343 (421)
T 4hnl_A 266 QLRSQSATPIATGEL-FNNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIA-WHTPSDISPVGLAVNT 343 (421)
T ss_dssp HHHTTCCCCEEECTT-CCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEEC-CCCCSSSCHHHHHHHH
T ss_pred HHHhcCCCCeecCcc-eehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEE-EeCCcchhHHHHHHHH
Confidence 999999999999997 67889999999999999999999999999999999999999999985 565555 556665555
Q ss_pred HHhhcCCC
Q 012041 427 SVGLASGQ 434 (472)
Q Consensus 427 Ava~~~~~ 434 (472)
++++..+.
T Consensus 344 hl~aa~~n 351 (421)
T 4hnl_A 344 HLNIHLHN 351 (421)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCCC
Confidence 55544443
No 13
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=100.00 E-value=1.2e-50 Score=420.50 Aligned_cols=332 Identities=17% Similarity=0.222 Sum_probs=240.7
Q ss_pred CeEEEEEEEC-CeeeeeccCCCccccceeeeecc----CCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHH
Q 012041 61 PTVEVDLITD-DLFRSAVPSGASTGIYEALELRD----GDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIML 135 (472)
Q Consensus 61 ~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d----~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~ 135 (472)
++++|+|+|| |+ +||||+.++.. +..|.|.+++ +...|++.++|.|+|+|+.+++.+|+.|.
T Consensus 51 ~~v~V~v~td~G~----------~G~GE~~~~~~sGa~~r~~~~~~~~---~~~~i~~~l~p~LiG~d~~~~~~i~~~l~ 117 (413)
T 1kko_A 51 ECVSVQLILENGA----------VAVGDCAAVQYSGAGGRDPLFLAEH---FIPFLNDHIKPLLEGRDVDAFLPNARFFD 117 (413)
T ss_dssp EEEEEEEEETTSC----------EEEEEECCCTTTTSTTCCCCCCHHH---HHHHHHHHTHHHHTTCBCSCSHHHHHHHH
T ss_pred ceEEEEEEECCCC----------EEEEEecccccccccccCccccHHH---HHHHHHHHHHHHHcCCChHhHHHHHHHHH
Confidence 5699999999 99 78888754300 0003455544 44556778999999999999999999997
Q ss_pred HhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcc---eeeeeEEEeecCCccCCCcccccceeecc
Q 012041 136 EIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKEL---VMPVPAFNVINGGSHAGNNLAMQEFMILP 212 (472)
Q Consensus 136 ~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~---~vp~~~~~~~~gg~~~~~~l~~~e~~~~p 212 (472)
.... .++..+.+|++||||||||+.||.+|+|||+||| |.... +-++|+|++ +|.+..+. .+
T Consensus 118 ~~~~--~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~l~~~~vp~y~~--~g~~~~~~--~~------ 182 (413)
T 1kko_A 118 KLRI--DGNLLHTAVRYGLSQALLDATALASGRLKTEVVC---DEWQLPCVPEAIPLFGQ--SGDDRYIA--VD------ 182 (413)
T ss_dssp HCEE--TTEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---HHTTCCCCCCCCCEECC--CTTCTTHH--HH------
T ss_pred hhhc--ccCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CccccccccCCeEEEEe--cCccccCC--HH------
Confidence 6421 1112346899999999999999999999999999 74211 125555764 33221100 00
Q ss_pred CCcccHHHHHHHHHHH-HHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCC-CC-CcEEEEecccc
Q 012041 213 VGATSFAEALRMGSEV-YHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGY-TG-KINIGMDVAAS 289 (472)
Q Consensus 213 ~~~~~~~~a~~~~~~~-~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~-~g-~i~l~vD~~a~ 289 (472)
+.++++.+...+| |+.+| .|+|. +.+.+.+.++...+.++++.. .| ++.|++|+|
T Consensus 183 ---~~~~~~~~~~~~G~~~~iK----~KvG~-------------~~~~~~~~l~~d~~~v~aiR~~~G~~~~L~vDan-- 240 (413)
T 1kko_A 183 ---KMILKGVDVLPHALINNVE----EKLGF-------------KGEKLREYVRWLSDRILSLRSSPRYHPTLHIDVY-- 240 (413)
T ss_dssp ---HHHHTTCSEEEETTCCCCC----CCCCT-------------TSHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECT--
T ss_pred ---HHHHHHHHHHhCCCccEEE----EecCC-------------ChhhHHHHHHHHHHHHHHHHHhhCCCCeEEEECC--
Confidence 0111111111223 54443 44431 111122222222222222211 14 799999995
Q ss_pred cccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhh----CCeeEEeCCCC----cCCHHHHHHHHhh-----cCCe
Q 012041 290 EFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRD----FPIVSIEDPFD----QDDWSSWASLQSS-----VDIQ 356 (472)
Q Consensus 290 ~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~----~~l~~iEdP~~----~~D~~~~~~L~~~-----~~~p 356 (472)
++|.+. ..||.+++++++.+ +++ +++ |||||++ ++|+++|++|+++ +++|
T Consensus 241 ------~~~~~~---------~~~~~~~A~~~~~~-L~~~~~~~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ip 303 (413)
T 1kko_A 241 ------GTIGLI---------FDMDPVRCAEYIAS-LEKEAQGLPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVK 303 (413)
T ss_dssp ------THHHHH---------TTTCHHHHHHHHHH-TGGGGTTSCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred ------Cccccc---------cCCCHHHHHHHHHH-HHhccCCcce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCc
Confidence 444332 25899999998655 666 334 9999999 7899999999999 8899
Q ss_pred EEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh--hHHHHHHHhhcCCC
Q 012041 357 LVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETED--NFIADLSVGLASGQ 434 (472)
Q Consensus 357 I~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~--s~~a~lAva~~~~~ 434 (472)
|++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+++||.+ ++++|||+++++.+
T Consensus 304 Ia~dE~-~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~~et~i~~aa~~hlaaa~~~~~ 382 (413)
T 1kko_A 304 IVADEW-CNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALAARPMR 382 (413)
T ss_dssp EEECTT-CCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTTSCHHHHHHHHHHHHHHCCSE
T ss_pred EEcCCC-CCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCCCCCHHHHHHHHHHHHcCCCCc
Confidence 999995 788999999999999999999999999999999999999999999998887779987 57899999999999
Q ss_pred c--ccCCCCCchhHHHhhHHHHHHHHhC
Q 012041 435 I--KTGAPCRSERLAKYNQLLRIEEELG 460 (472)
Q Consensus 435 i--~~g~~~~~e~~~k~n~ll~i~~~l~ 460 (472)
+ ++|...+++|++|||||+|||+++.
T Consensus 383 ip~kpG~g~~~~~~~~~n~l~r~~~~~~ 410 (413)
T 1kko_A 383 MLIKPGMGFDEGLNIVFNEMNRTIALLQ 410 (413)
T ss_dssp EECCSCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 9 9999999999999999999999875
No 14
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=100.00 E-value=2.7e-50 Score=418.29 Aligned_cols=327 Identities=17% Similarity=0.221 Sum_probs=240.2
Q ss_pred CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCc----chHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHH
Q 012041 61 PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGG----KGVLNAVKNINDILGPKLVGVDIRDQAEVDAIML 135 (472)
Q Consensus 61 ~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g----~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~ 135 (472)
.+|+|+|+|| |+ +||||+.++... .|++ ++.+++...|++.++|.|+|+|+.+++.+|+.|.
T Consensus 51 ~~v~V~v~td~G~----------~G~GE~~~~~~~---g~g~~e~~~~~~~~~~~i~~~l~p~L~G~d~~~~~~i~~~l~ 117 (413)
T 1kcz_A 51 ESISVLLVLEDGQ----------VAHGDCAAVQYS---GAGGRDPLFLAKDFIPVIEKEIAPKLIGREITNFKPMAEEFD 117 (413)
T ss_dssp CEEEEEEEETTSC----------EEEEEECCCTTT---TSTTSCSCCCHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHHH
T ss_pred cEEEEEEEECCCC----------EEEEEEcccccc---ccCcccccccHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHH
Confidence 5799999999 99 788887543210 1211 2345677778888999999999999999999996
Q ss_pred HhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCC-----CcceeeeeEEEeecCCccCCCcccccceee
Q 012041 136 EIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGT-----KELVMPVPAFNVINGGSHAGNNLAMQEFMI 210 (472)
Q Consensus 136 ~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~-----~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~ 210 (472)
... ..+++++.+|++|||+||||+.||.+|+|||+||| |. .++ |+|+|+.. |+.. ..
T Consensus 118 ~~~--~~g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~~~~~--~vp~~~~~-g~~~----~~------ 179 (413)
T 1kcz_A 118 KMT--VNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIR---DEYNPGAEIN--AVPVFAQS-GDDR----YD------ 179 (413)
T ss_dssp HCE--ETTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---HHHSTTCCCC--CCCEECCC-TTCT----TH------
T ss_pred hcc--cCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhc---ccccCcCccC--CeeeeEec-Cccc----cC------
Confidence 432 11223557899999999999999999999999999 73 333 44556532 1100 00
Q ss_pred ccCCcccHHHHHHHHHHH-HHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHH----HHHHHHHHHHHhCCCCCcEEEEe
Q 012041 211 LPVGATSFAEALRMGSEV-YHILKGIIKEKYGQDACNVGDEGGFAPNVQDNRE----GLVLLTDAIEKAGYTGKINIGMD 285 (472)
Q Consensus 211 ~p~~~~~~~~a~~~~~~~-~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~----~l~~v~~av~~~g~~g~i~l~vD 285 (472)
.+++.++++.+...++ |+++| .|+|.. . ....+ +++.++...+.+| .++.|++|
T Consensus 180 --~~~~~~~~a~~~~~~G~~~~~K----iKvG~~-----------~--~~~~~~~~~d~~~v~avR~~~G--~~~~l~vD 238 (413)
T 1kcz_A 180 --NVDKMIIKEADVLPHALINNVE----EKLGLK-----------G--EKLLEYVKWLRDRIIKLRVRED--YAPIFHID 238 (413)
T ss_dssp --HHHHHHHTTCSEEEECCCCCCC----CCCCTT-----------S--HHHHHHHHHHHHHHHHHCSSTT--CCCEEEEE
T ss_pred --CHHHHHHHHHHHHHhcchhhee----eccCCC-----------c--cchhhHHHHHHHHHHHHHHhcC--CCceEEEe
Confidence 0112233333333445 65554 444310 0 00122 3344333222333 27999999
Q ss_pred cccc--cccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhC--Cee-EEeCCCC----cCCHHHHHHHHhh----
Q 012041 286 VAAS--EFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDF--PIV-SIEDPFD----QDDWSSWASLQSS---- 352 (472)
Q Consensus 286 ~~a~--~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~--~l~-~iEdP~~----~~D~~~~~~L~~~---- 352 (472)
+|.. ++| .||.+++++++.+ ++++ ++. |||||++ ++|+++|++|+++
T Consensus 239 aN~~~~~~~-------------------~~~~~~a~~~~~~-L~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~~~l~~~ 298 (413)
T 1kcz_A 239 VYGTIGAAF-------------------DVDIKAMADYIQT-LAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGR 298 (413)
T ss_dssp CTTHHHHHT-------------------TTCHHHHHHHHHH-HHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccccc-------------------CCCHHHHHHHHHH-HHhhcCCcceEEecCCCCCCCcccHHHHHHHHHhhhcC
Confidence 9421 111 0788999998655 7777 666 9999995 5699999999999
Q ss_pred -cCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHH--HHHHh
Q 012041 353 -VDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIA--DLSVG 429 (472)
Q Consensus 353 -~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a--~lAva 429 (472)
+++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++|++|++.||+++.++ |||++
T Consensus 299 g~~ipIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~hlaaa 377 (413)
T 1kcz_A 299 GVDAELVADEW-CNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAEVTTNIGMA 377 (413)
T ss_dssp TCCEEEEECTT-CCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCcEEeCCC-cCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCCCCCCHHHHHHHHHHHhc
Confidence 7899999997 7889999999999999999999999999999999999999999999988878899887655 88888
Q ss_pred hcCCCccc--CCCCCchhHHHhhHHHHHHHHhC
Q 012041 430 LASGQIKT--GAPCRSERLAKYNQLLRIEEELG 460 (472)
Q Consensus 430 ~~~~~i~~--g~~~~~e~~~k~n~ll~i~~~l~ 460 (472)
+.+.+++- |.+++++++.|||||+|||++|+
T Consensus 378 ~~~~~i~~~pG~~~~~g~~~~~n~~~r~~~~~~ 410 (413)
T 1kcz_A 378 CGARQVLAKPGMGVDEGMMIVKNEMNRVLALVG 410 (413)
T ss_dssp HTCSEEECCSSSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeecCCCCCCcchhhhHHHHHHHHHHHh
Confidence 88877765 98888899999999999999986
No 15
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=100.00 E-value=3.8e-49 Score=410.41 Aligned_cols=319 Identities=15% Similarity=0.201 Sum_probs=238.9
Q ss_pred hhcCCCceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhh
Q 012041 38 STASSSAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILG 116 (472)
Q Consensus 38 ~~~~~~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~la 116 (472)
-||.+.|||++|++..+ +.++..++|+|+|| |+ +||||+.. .+. ..++...|++.++
T Consensus 18 ~~~~~~mkIt~v~~~~~--~~~~~~v~V~v~td~G~----------~G~GE~~~-------~~~---~~~~~~~i~~~l~ 75 (425)
T 3vcn_A 18 LYFQSMLKIIDAKVIVT--CPGRNFVTLKITTEDGI----------TGVGDATL-------NGR---ELSVVSFLQDHMV 75 (425)
T ss_dssp -----CCBEEEEEEEEE--CSSSCEEEEEEEETTSC----------EEEEECCC-------TTC---HHHHHHHHHHTTH
T ss_pred ccCCCCCEEEEEEEEEE--cCCCcEEEEEEEECCCC----------EEEEeccC-------CCC---hHHHHHHHHHHHH
Confidence 35544599999998765 33457899999999 99 89999742 111 2345566778899
Q ss_pred hcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCC
Q 012041 117 PKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGG 196 (472)
Q Consensus 117 p~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg 196 (472)
|.|+|+||.+++++|+.|++.. .++++.+..+|++||||||||++||.+|+|||+||| |+.++++|+ |+++++.
T Consensus 76 p~LiG~dp~~ie~i~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~ 149 (425)
T 3vcn_A 76 PSLIGRDAHQIEDIWQFFYRGS-YWRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLG---GACRTGVTV--YGHANGE 149 (425)
T ss_dssp HHHTTCBTTCHHHHHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSSSSEEE--EEEEEES
T ss_pred HHhCCCChhhHHHHHHHHHhhc-ccCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeeeE--EEeCCCC
Confidence 9999999999999999998632 233333445799999999999999999999999999 987788887 5443221
Q ss_pred ccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCc----ccCCCCCC-CCC------C---------
Q 012041 197 SHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDA----CNVGDEGG-FAP------N--------- 256 (472)
Q Consensus 197 ~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~----~~~~~~G~-~~~------~--------- 256 (472)
+. ++..+++.+..++||+++| .|+|... ......+. +.+ .
T Consensus 150 -------~~---------e~~~~~a~~~~~~Gf~~iK----lKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~ 209 (425)
T 3vcn_A 150 -------TI---------EDTIAEAVKYKAMGYKAIR----LQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKY 209 (425)
T ss_dssp -------SH---------HHHHHHHHHHHHTTCSEEE----EEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHH
T ss_pred -------CH---------HHHHHHHHHHHHcCCCEEE----EeecCccccccccccccccccCcccccccccccccchhH
Confidence 11 2335566666677887775 6776311 00000000 011 1
Q ss_pred CCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeC
Q 012041 257 VQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIED 336 (472)
Q Consensus 257 ~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEd 336 (472)
++.+.+.+++||+++ | .++.|++|+ |++||.++++++ .+.++++++.||||
T Consensus 210 ~~~d~e~v~avR~a~---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEq 260 (425)
T 3vcn_A 210 LNSVPKLFERAREVL---G--WDVHLLHDV-----------------------HHRLTPIEAARL-GKDLEPYRLFWLED 260 (425)
T ss_dssp HTTTHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSEEEC
T ss_pred HHHHHHHHHHHHHHc---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEEC
Confidence 234456666666665 3 289999999 466889999987 56689999999999
Q ss_pred CCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 012041 337 PFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSG 416 (472)
Q Consensus 337 P~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~ 416 (472)
|++++|++++++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++++..
T Consensus 261 P~~~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~ 339 (425)
T 3vcn_A 261 SVPAENQAGFRLIRQHTTTPLAVGEI-FAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGATD 339 (425)
T ss_dssp CSCCSSTTHHHHHHHHCCSCEEECTT-CCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCTT
T ss_pred CCChhhHHHHHHHHhcCCCCEEeCCC-cCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCCc
Confidence 99999999999999999999999997 57889999999999999999999999999999999999999999986544333
Q ss_pred CChhhHHHHHHHhhcCCC
Q 012041 417 ETEDNFIADLSVGLASGQ 434 (472)
Q Consensus 417 Et~~s~~a~lAva~~~~~ 434 (472)
++.++.++.++++...+.
T Consensus 340 ~s~ig~aA~~hlaaa~pn 357 (425)
T 3vcn_A 340 LSPVTMAAALHFDMSITN 357 (425)
T ss_dssp SCHHHHHHHHHHHHTCSC
T ss_pred ccHHHHHHHHHHHHhCCC
Confidence 687777666666654444
No 16
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=100.00 E-value=3.5e-49 Score=410.13 Aligned_cols=315 Identities=18% Similarity=0.206 Sum_probs=235.2
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
+|||++|++..+ ...+...++|+|+|| |+ +||||+.. .+.. .++...|++.++|.|+|
T Consensus 26 ~mkIt~v~~~~~-~~~~~~~v~V~v~td~Gi----------~G~GE~~~-------~~~~---~~~~~~i~~~l~p~LiG 84 (422)
T 3tji_A 26 PVIIKNIECFIT-RPDRHNLVTVRVTTEQGI----------TGHGCATF-------QQRP---LAVKTLVDEYLQPLMIG 84 (422)
T ss_dssp CCBEEEEEEEEE-CSSSSCEEEEEEEETTSC----------CEEEECCC-------TTSH---HHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEE-cCCCccEEEEEEEECCCC----------EEEEeccC-------CCCH---HHHHHHHHHHHHHHhCC
Confidence 599999998766 322336899999999 99 89999742 2222 34455677789999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
+||.+++++|+.|++.. .++++.+..+|++||||||||++||.+|+|||+||| |+.++++|+ |+++++.
T Consensus 85 ~dp~~ie~~~~~l~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~----- 153 (422)
T 3tji_A 85 RDANNIEDLWQMMNVNA-YWRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFG---GKSRDAIPA--YSHASGE----- 153 (422)
T ss_dssp SBTTCHHHHHHHHHHTT-SSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEEE--EEEEEES-----
T ss_pred CCcccHHHHHHHHHHhh-hccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCCeEEE--EEEeCCC-----
Confidence 99999999999998632 233333446799999999999999999999999999 987778887 5543221
Q ss_pred cccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccC----C----CCCCCCC---CCCCcHHHHHHHHHH
Q 012041 202 NLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNV----G----DEGGFAP---NVQDNREGLVLLTDA 270 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~----~----~~G~~~~---~~~~~~~~l~~v~~a 270 (472)
+. ++..+++.+...+||+++| .|+|...... . ..|.+.. .++.+.+.+++||++
T Consensus 154 --~~---------e~~~~~a~~~~~~G~~~iK----lKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~a 218 (422)
T 3tji_A 154 --TL---------EALFASVDALIAQGYRHIR----CQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREK 218 (422)
T ss_dssp --SH---------HHHHHHHHHHHHTTCSEEE----EEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH
T ss_pred --CH---------HHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 11 2334556666667887765 6776421100 0 0000000 011223444444444
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | .++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|+
T Consensus 219 v---G--~d~~L~vDa-----------------------N~~~~~~~A~~~-~~~Le~~~i~~iEqP~~~~d~~~~~~l~ 269 (422)
T 3tji_A 219 Y---G--WKLHILHDV-----------------------HERLFPQQAVQL-AKQLEPFQPYFIEDILPPQQSAWLEQVR 269 (422)
T ss_dssp H---C--SSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSCGGGGGGHHHHH
T ss_pred c---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhhCCCeEECCCChhhHHHHHHHH
Confidence 4 3 289999999 366889999987 5668999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++++..++.++.+++++++.
T Consensus 270 ~~~~iPIa~dE~-~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~~~s~Ig~aA~~hlaa 348 (422)
T 3tji_A 270 QQSCVPLALGEL-FNNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPGDMTPIGVAVNTHLNI 348 (422)
T ss_dssp HHCCCCEEECTT-CCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHHHHHHHHHH
T ss_pred hhCCCCEEEeCC-cCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCCCccHHHHHHHHHHHH
Confidence 999999999997 6778999999999999999999999999999999999999999998544432378777666666554
Q ss_pred cCCC
Q 012041 431 ASGQ 434 (472)
Q Consensus 431 ~~~~ 434 (472)
..+.
T Consensus 349 a~pn 352 (422)
T 3tji_A 349 HLHN 352 (422)
T ss_dssp HCTT
T ss_pred hCCC
Confidence 3433
No 17
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=100.00 E-value=9.2e-49 Score=405.13 Aligned_cols=314 Identities=17% Similarity=0.183 Sum_probs=235.0
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
.||||+|++..+ ...+...++|+|+|| |+ +||||+.. .+.. .++...|++.++|.|+|
T Consensus 5 ~mkIt~v~~~~~-~~~~~~~~~V~v~td~G~----------~G~GE~~~-------~~~~---~~~~~~i~~~l~p~liG 63 (401)
T 3sbf_A 5 ETIISDIHCIIT-KPDRHNLITVVVETNEGV----------TGFGCATF-------QQRP---LAVKTMVDEYLKPILIG 63 (401)
T ss_dssp CCBEEEEEEEEE-CSSSSCEEEEEEEETTSC----------EEEEECCC-------TTSH---HHHHHHHHHTHHHHHTT
T ss_pred CeEEEEEEEEEE-cCCCceEEEEEEEeCCCC----------EEEEcccc-------CCCH---HHHHHHHHHHHHHHHcC
Confidence 499999999776 322336799999999 99 89999742 1222 34456677789999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
+||.+++++|+.|++.. .++++.+..+|++||||||||++||.+|+|||+||| |+.++++|+ |+++++.
T Consensus 64 ~d~~~~e~~~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~----- 132 (401)
T 3sbf_A 64 KNANNIEDLWQMMMVNA-YWRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFG---GKSRDAIPV--YTHATSD----- 132 (401)
T ss_dssp SBTTCHHHHHHHHHHTT-SSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEE--EEEEEES-----
T ss_pred CChhhHHHHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhC---CCcCCeeeE--EEeCCCC-----
Confidence 99999999999998632 233333445799999999999999999999999999 987778887 5443221
Q ss_pred cccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCC--------CCCCCCC---CCCCcHHHHHHHHHH
Q 012041 202 NLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVG--------DEGGFAP---NVQDNREGLVLLTDA 270 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~--------~~G~~~~---~~~~~~~~l~~v~~a 270 (472)
+. ++..+++.+...+||+++| .|+|....... ..|.+.. .++.+.+.+++||++
T Consensus 133 --~~---------e~~~~~a~~~~~~G~~~~K----~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a 197 (401)
T 3sbf_A 133 --TM---------EGIYDLVEGFLEKGYKHIR----CQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREK 197 (401)
T ss_dssp --SH---------HHHHHHHHHHHHTTCCEEE----EEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH
T ss_pred --CH---------HHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 11 2334556666667887765 67764211000 0010000 011223444444444
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | .++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|+
T Consensus 198 ~---G--~d~~l~vDa-----------------------n~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~~~~~~~~l~ 248 (401)
T 3sbf_A 198 Y---G--NQFHILHDV-----------------------HERLFPNQAIQF-AKEVEQYKPYFIEDILPPNQTEWLDNIR 248 (401)
T ss_dssp H---T--TSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSCEECSSCTTCGGGHHHHH
T ss_pred c---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCChhHHHHHHHHH
Confidence 4 3 289999999 466889999988 5668999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC-CChhhHHHHHHHh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSG-ETEDNFIADLSVG 429 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~-Et~~s~~a~lAva 429 (472)
+++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++ .|.+. ++.++.+++++++
T Consensus 249 ~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~-~h~~~~~s~i~~aA~~hla 326 (401)
T 3sbf_A 249 SQSSVSLGLGEL-FNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIA-WHCAPDMTPIGAAVNTHLN 326 (401)
T ss_dssp TTCCCCEEECTT-CCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEEC-CCCCTTSCHHHHHHHHHHH
T ss_pred hhCCCCEEeCCc-cCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEE-ecCCcccchHHHHHHHHHH
Confidence 999999999997 67899999999999999999999999999999999999999999986 55443 7877766666655
Q ss_pred hcCCC
Q 012041 430 LASGQ 434 (472)
Q Consensus 430 ~~~~~ 434 (472)
...+.
T Consensus 327 aa~p~ 331 (401)
T 3sbf_A 327 VHLHN 331 (401)
T ss_dssp HHSTT
T ss_pred HhCCC
Confidence 43433
No 18
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.7e-48 Score=400.70 Aligned_cols=304 Identities=19% Similarity=0.196 Sum_probs=237.8
Q ss_pred CceEEEEEEEEEec--------CCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQIID--------SRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~~--------~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+.. +.+ +..++|+|+|| |+ +||||+.++.. ++|++++.+++..
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td~G~----------~G~GE~~~~~~---~~y~~e~~~~~~~ 70 (381)
T 3fcp_A 4 TATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGI----------CGIGEATTIGG---LSYGVESPEAISS 70 (381)
T ss_dssp CCBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSC----------EEEEEEECSTT---TTSSSCCHHHHHH
T ss_pred CcEEEEEEEEEEeccccCCeEecccEEEeeeEEEEEEEECCCC----------EEEeccccCCC---CccCCCCHHHHHH
Confidence 39999999998842 222 35699999999 99 89999976432 3577888888888
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.|++.++|.|+|+||.+++++|+.|++... + ..+|++|||+||||+.||.+|+|||+||| |..++++|++
T Consensus 71 ~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----g--~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v~~~- 140 (381)
T 3fcp_A 71 AITHYLTPLLKGQPADNLNALTARMNGAIK----G--NTFAKSAIETALLDAQGKALGLPVSALLG---GALQTALPVL- 140 (381)
T ss_dssp HHHHTHHHHHTTSBSSCHHHHHHHHHHHCC----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEBC-
T ss_pred HHHHHHHHHhcCCCcCCHHHHHHHHHHHhc----C--cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCceeeE-
Confidence 898899999999999999999999986321 1 25799999999999999999999999999 9877788874
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGS-EVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~-~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
.+++.+ +. .+.++++.+... .||+++| .|+|. .+++.+.+.++++|
T Consensus 141 -~t~~~~-------~~---------~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~v~avR 187 (381)
T 3fcp_A 141 -WTLASG-------DT---------AKDIAEGEKLLAEGRHRAFK----LKIGA------------RELATDLRHTRAIV 187 (381)
T ss_dssp -EEECSS-------CH---------HHHHHHHHHHTC----CEEE----EECCS------------SCHHHHHHHHHHHH
T ss_pred -EEecCC-------Ch---------HHHHHHHHHHHHhCCCCEEE----EecCC------------CChHHHHHHHHHHH
Confidence 232211 01 123445555444 4676664 66552 11122344444444
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
+++ | +++.|++|+ |++||.++|+++ .+.+++|++.|||||++++|+++|++
T Consensus 188 ~a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~ 238 (381)
T 3fcp_A 188 EAL---G--DRASIRVDV-----------------------NQAWDAATGAKG-CRELAAMGVDLIEQPVSAHDNAALVR 238 (381)
T ss_dssp HHT---C--TTCEEEEEC-----------------------TTCBCHHHHHHH-HHHHHHTTCSEEECCBCTTCHHHHHH
T ss_pred HHc---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCccceeCCCCcccHHHHHH
Confidence 443 3 279999999 466889999988 55689999999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.++++++
T Consensus 239 l~~~~~ipIa~dE~-~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hl 316 (381)
T 3fcp_A 239 LSQQIETAILADEA-VATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGT-MLEGTVGTVASLHA 316 (381)
T ss_dssp HHHHSSSEEEESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECC-SCCCHHHHHHHHHH
T ss_pred HHHhCCCCEEECCC-cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCC-CCccHHHHHHHHHH
Confidence 99999999999997 57799999999999999999999999999999999999999999998766 57898887777776
Q ss_pred hhcCC
Q 012041 429 GLASG 433 (472)
Q Consensus 429 a~~~~ 433 (472)
+...+
T Consensus 317 aaa~~ 321 (381)
T 3fcp_A 317 WSTLP 321 (381)
T ss_dssp HTTSC
T ss_pred HHhCC
Confidence 66555
No 19
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=100.00 E-value=1.9e-48 Score=400.29 Aligned_cols=306 Identities=17% Similarity=0.218 Sum_probs=241.6
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|+|++|+++.+. .+.+ +..++|+|+|| |+ +||||+.++.. ++|++++.+++...
T Consensus 6 ~~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~~---~~y~~e~~~~~~~~ 72 (382)
T 3dgb_A 6 SAIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGI----------EGLGESTTIGG---LAYGNESPDSIKTN 72 (382)
T ss_dssp TBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEEECSTT---TTSSSCCHHHHHHH
T ss_pred CeeeEEEEEEEeeccCCCeEecCeEEeeeeEEEEEEEECCCC----------EEEEecccCCC---CccCCCCHHHHHHH
Confidence 449999998873 2333 35699999999 99 89999976432 35778888888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+||.+++++|+.|++... + ..+|++|||+||||+.||.+|+|||+||| |..++++|++
T Consensus 73 i~~~l~p~liG~d~~~~~~~~~~l~~~~~----g--~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v~~~-- 141 (382)
T 3dgb_A 73 IDRFVAPLLIGQDASNINAAMLRLEQSIR----G--NTFAKSGIESALLDAQGKRLGLPVSELLG---GRVRDALPVA-- 141 (382)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHHHHCC----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEBC--
T ss_pred HHHHHHHHhcCCCccCHHHHHHHHHHHhc----C--chHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCeeeEE--
Confidence 98899999999999999999999986321 1 25799999999999999999999999999 9877888874
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGS-EVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~-~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
.+++.+ +. .+.++++.+... .||+++| .|+|. .+++.+.+.++++|+
T Consensus 142 ~t~~~~-------~~---------~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~v~avR~ 189 (382)
T 3dgb_A 142 WTLASG-------DT---------AKDIAEAQKMLDLRRHRIFK----LKIGA------------GEVDRDLAHVIAIKK 189 (382)
T ss_dssp EEECSS-------CH---------HHHHHHHHHHHHTTSCSEEE----EECCS------------SCHHHHHHHHHHHHH
T ss_pred EEecCC-------Ch---------HHHHHHHHHHHHhCCCCEEE----EeeCC------------CCHHHHHHHHHHHHH
Confidence 222211 01 123445555444 3676554 56542 112234455555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
++ | .++.|++|+ |++|+.++++++ .+.+++|++.|||||++++|++++++|
T Consensus 190 a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l 240 (382)
T 3dgb_A 190 AL---G--DSASVRVDV-----------------------NQAWDEAVALRA-CRILGGNGIDLIEQPISRNNRAGMVRL 240 (382)
T ss_dssp HH---G--GGSEEEEEC-----------------------TTCBCHHHHHHH-HHHHHTTTCCCEECCBCTTCHHHHHHH
T ss_pred Hc---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHhhcCcCeeeCCCCccCHHHHHHH
Confidence 55 3 279999999 466789999987 566899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.+++++++
T Consensus 241 ~~~~~ipIa~dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~ig~aa~~hla 318 (382)
T 3dgb_A 241 NASSPAPIMADES-IECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGT-MLEGGIGTLASAHAF 318 (382)
T ss_dssp HHHCSSCEEESTT-CSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SCCCHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCC-cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecC-CCccHHHHHHHHHHH
Confidence 9999999999997 67899999999999999999999999999999999999999999998766 578988877777776
Q ss_pred hcCCCcc
Q 012041 430 LASGQIK 436 (472)
Q Consensus 430 ~~~~~i~ 436 (472)
...+.+.
T Consensus 319 aa~~~~~ 325 (382)
T 3dgb_A 319 LTLNKLS 325 (382)
T ss_dssp TTSSCCT
T ss_pred HcCCCCc
Confidence 6555543
No 20
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=100.00 E-value=2e-48 Score=406.17 Aligned_cols=324 Identities=15% Similarity=0.156 Sum_probs=233.9
Q ss_pred hhhhhhcCC--C-ceEEEEEEEEEecCCCCCeEEEEEEEC--CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 34 CSVASTASS--S-AKVKSVKARQIIDSRGNPTVEVDLITD--DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 34 ~~~~~~~~~--~-m~I~~V~~~~v~~~~~~~~v~V~I~td--G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|+---||.. + |||++|++..+ ...+...++|+|+|| |+ +||||+.. .+.. .++.
T Consensus 14 ~~~~~~~~~~~~~mkIt~v~~~~~-~~~~~~~v~V~v~Td~~Gi----------~G~GE~~~-------~~~~---~~~~ 72 (440)
T 3t6c_A 14 GTENLYFQSMMSNLFITNVKTILT-APGGIDLVVVKIETNEPGL----------YGLGCATF-------TQRI---YAVQ 72 (440)
T ss_dssp ------------CCCEEEEEEEEE-CTTSSCEEEEEEEESSTTC----------EEEEECCC-------GGGH---HHHH
T ss_pred CccchhhhhcCCCCEEEEEEEEEE-CCCCceEEEEEEEEcCCCC----------EEEEeecc-------CCCH---HHHH
Confidence 333456655 3 99999999766 332336799999997 77 89999743 1222 3445
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
..|++.|+|.|+|+||.+++++|+.|++.. .++++.+..+|++||||||||++||.+|+|||+||| |+.++++|+
T Consensus 73 ~~i~~~l~p~LiG~dp~~ie~i~~~~~~~~-~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~- 147 (440)
T 3t6c_A 73 SAIDEYLAPFLIGKDPARIEDIWQSAAVSG-YWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLG---GKCRDGIAL- 147 (440)
T ss_dssp HHHHTTHHHHHTTCCTTCHHHHHHHHHHTT-SCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSSEEE-
T ss_pred HHHHHHHHHHHcCCChhhHHHHHHHHHHhc-ccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeeEE-
Confidence 567777999999999999999999998632 233333445799999999999999999999999999 987778887
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCccc-----------CCCCCCCC---
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACN-----------VGDEGGFA--- 254 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~-----------~~~~G~~~--- 254 (472)
|+.+++. +. ++..+++.+...+||+++| .|+|..... +..+.++.
T Consensus 148 -y~~~~~~-------~~---------e~~~~~a~~~~~~Gf~~~K----~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~ 206 (440)
T 3t6c_A 148 -YVHTDGA-------DE---------VEVEDSARAKMEEGYQYIR----CQMGMYGGAGTDDLRLIANRMVKAKNIQPKR 206 (440)
T ss_dssp -EEEECCS-------SH---------HHHHHHHHHHHHTTCSEEE----ECSSSSTTCCBCCHHHHSSCBCCCSSCCCCC
T ss_pred -EEECCCC-------CH---------HHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccccccc
Confidence 5443221 11 2334556666667887765 666632100 00000000
Q ss_pred ------CC--------CCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHH
Q 012041 255 ------PN--------VQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGD 320 (472)
Q Consensus 255 ------~~--------~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~ 320 (472)
+. ++.+.+.+++||+++ | .++.|++|+ |++|+.+++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~---G--~d~~L~vDa-----------------------N~~~~~~~A~~ 258 (440)
T 3t6c_A 207 SPRTKAPGIYFDPEAYAKSIPRLFDHLRNKL---G--FSVELLHDA-----------------------HERITPINAIH 258 (440)
T ss_dssp CCSSCCSSEECCHHHHHHHHHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCSCHHHHHH
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHhc---C--CCCeEEEEC-----------------------CCCCCHHHHHH
Confidence 00 112234444444444 3 289999999 46688999998
Q ss_pred HHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHH
Q 012041 321 LYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAAL 400 (472)
Q Consensus 321 ~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~ 400 (472)
+ .+.++++++.|||||++++|++++++|++++++||++||+ ++++++++++++.+++|++|||++++||||+++++++
T Consensus 259 ~-~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~ 336 (440)
T 3t6c_A 259 M-AKALEPYQLFFLEDPVAPENTEWLKMLRQQSSTPIAMGEL-FVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAI 336 (440)
T ss_dssp H-HHHTGGGCCSEEECSSCGGGGGGHHHHHHHCCSCEEECTT-CCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred H-HHHhhhcCCCEEECCCChhhHHHHHHHHhhcCCCEEeCcc-cCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHH
Confidence 8 5668999999999999999999999999999999999997 6789999999999999999999999999999999999
Q ss_pred HHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCC
Q 012041 401 DSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQ 434 (472)
Q Consensus 401 ~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~ 434 (472)
+|+++|+++++++++.++.++.+++++++...+.
T Consensus 337 ~A~~~gi~~~~h~~~~~s~Ig~aa~~hlaaa~pn 370 (440)
T 3t6c_A 337 YSELNGVRTAWHSPGDISPIGVCANMHLDLSSPN 370 (440)
T ss_dssp HHHHTTCEECCCCSSSSCHHHHHHHHHHHHHCTT
T ss_pred HHHHcCCEEEeccCCCccHHHHHHHHHHHHhCCC
Confidence 9999999986544434787776665555543433
No 21
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=100.00 E-value=1.7e-48 Score=405.39 Aligned_cols=313 Identities=15% Similarity=0.193 Sum_probs=234.8
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGV 122 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~ 122 (472)
|||++|++..+ ..++..++|+|+|| |+ +||||+.. .+. ..++...|++.++|.|+|+
T Consensus 23 mkIt~v~~~~~--~~~~~~v~V~v~td~Gi----------~G~GE~~~-------~~~---~~~~~~~i~~~l~p~LiG~ 80 (424)
T 3v3w_A 23 MKIVDAKVIVT--CPGRNFVTLKIVTDQGI----------YGIGDATL-------NGR---EKSVVSYLEDYLIPVLIGR 80 (424)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSC----------EEEEECCC-------TTC---HHHHHHHHHHTHHHHHTTS
T ss_pred CEEEEEEEEEE--cCCCCEEEEEEEECCCC----------EEEEeccC-------CCC---hHHHHHHHHHHHHHHhcCC
Confidence 99999998765 23457899999999 99 89999742 111 2345566778899999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCc
Q 012041 123 DIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNN 202 (472)
Q Consensus 123 d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~ 202 (472)
||.+++++|+.|++.. .++++.+..+|++||||||||++||.+|+|||+||| |+.++++|+ |+++++.
T Consensus 81 dp~~ie~i~~~~~~~~-~~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~------ 148 (424)
T 3v3w_A 81 DPQQIEDIWQFFYRGA-YWRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLG---GKSRERILS--YTHANGK------ 148 (424)
T ss_dssp CTTCHHHHHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCSCSSEEE--EEEEEES------
T ss_pred ChhhHHHHHHHHHhcc-ccCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CcCCCceeE--EEeCCCC------
Confidence 9999999999998632 233333445799999999999999999999999999 987788887 5443221
Q ss_pred ccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcc----cCCCCC-CCC------CC---------CCCcHH
Q 012041 203 LAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDAC----NVGDEG-GFA------PN---------VQDNRE 262 (472)
Q Consensus 203 l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~----~~~~~G-~~~------~~---------~~~~~~ 262 (472)
+. ++..+++.+..++||+++| .|+|.... +....+ .+. |. ++.+.+
T Consensus 149 -~~---------e~~~~~a~~~~~~Gf~~iK----lKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 214 (424)
T 3v3w_A 149 -DL---------DSTLEAVRKAKDKGYKAIR----VQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPD 214 (424)
T ss_dssp -SH---------HHHHHHHHHHHHTTCSEEE----EEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHH
T ss_pred -CH---------HHHHHHHHHHHHcCCCEEE----EeccCccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 11 2345566666677887775 67663100 000000 001 11 112234
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCC
Q 012041 263 GLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDD 342 (472)
Q Consensus 263 ~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D 342 (472)
.+++||+++ | .++.|++|+ |++||.++++++ .+.++++++.|||||++++|
T Consensus 215 ~v~avR~av---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~d 265 (424)
T 3v3w_A 215 VFAAVRKEF---G--PDIHLLHDV-----------------------HHRLTPIEAARL-GKALEPYHLFWMEDAVPAEN 265 (424)
T ss_dssp HHHHHHHHH---C--SSSEEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSEEECCSCCSS
T ss_pred HHHHHHHHc---C--CCCcEEEeC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCChHh
Confidence 444444444 3 289999999 466889999987 56689999999999999999
Q ss_pred HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 012041 343 WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNF 422 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~ 422 (472)
++++++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++++..++.++.
T Consensus 266 ~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig~ 344 (424)
T 3v3w_A 266 QESFKLIRQHTTTPLAVGEV-FNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGATDLSPVCM 344 (424)
T ss_dssp TTHHHHHHHHCCSCEEECTT-CCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCTTSCHHHH
T ss_pred HHHHHHHHhhCCCCEEEccC-cCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCCcccHHHH
Confidence 99999999999999999997 57899999999999999999999999999999999999999999987655433687776
Q ss_pred HHHHHHhhcCCC
Q 012041 423 IADLSVGLASGQ 434 (472)
Q Consensus 423 ~a~lAva~~~~~ 434 (472)
++.++++...+.
T Consensus 345 aA~~hlaaa~pn 356 (424)
T 3v3w_A 345 GAALHFDYWVPN 356 (424)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhCCC
Confidence 666665554443
No 22
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=100.00 E-value=1.7e-48 Score=404.78 Aligned_cols=312 Identities=16% Similarity=0.159 Sum_probs=234.3
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGV 122 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~ 122 (472)
|||++|++..+ +.++..++|+|+|| |+ +||||+.. .+. ..++...|++.++|.|+|+
T Consensus 17 mkIt~v~~~~~--~~~~~~~~V~v~td~G~----------~G~GE~~~-------~~~---~~~~~~~i~~~l~p~LiG~ 74 (418)
T 3r4e_A 17 MKITAARVIIT--CPGRNFVTLKIETDQGV----------YGIGDATL-------NGR---ELSVVAYLQEHVAPCLIGM 74 (418)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSC----------EEEEECCC-------TTC---HHHHHHHHHHTHHHHHTTS
T ss_pred CEEEEEEEEEE--cCCCcEEEEEEEECCCC----------EEEEeccC-------CCC---hHHHHHHHHHHHHHHhcCC
Confidence 99999998765 33457899999999 99 89999742 111 2345566778899999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCc
Q 012041 123 DIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNN 202 (472)
Q Consensus 123 d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~ 202 (472)
||.+++++|+.|++.. .++++.+..+|++||||||||++||.+|+|||+||| |+.++++|+ |+.+++.
T Consensus 75 dp~~ie~l~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~------ 142 (418)
T 3r4e_A 75 DPRRIEDIWQYVYRGA-YWRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLG---GRSRDGIMV--YGHANGS------ 142 (418)
T ss_dssp CTTCHHHHHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSCSSEEE--EEEEEES------
T ss_pred ChhhHHHHHHHHHHhc-ccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CccCCeeeE--EEeCCCC------
Confidence 9999999999998632 233333445799999999999999999999999999 987788887 5443221
Q ss_pred ccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcc----cCCC--------CCCCCCC---------CCCcH
Q 012041 203 LAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDAC----NVGD--------EGGFAPN---------VQDNR 261 (472)
Q Consensus 203 l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~----~~~~--------~G~~~~~---------~~~~~ 261 (472)
+. ++..+++.+..++||+++| .|+|.... +..+ .++ .|. ++.+.
T Consensus 143 -~~---------e~~~~~a~~~~~~Gf~~~K----~k~G~~~~~~~~g~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~d~ 207 (418)
T 3r4e_A 143 -DI---------AETVEAVGHYIDMGYKAIR----AQTGVPGIKDAYGVGRGKLYYEPADAS-LPSVTGWDTRKALNYVP 207 (418)
T ss_dssp -SH---------HHHHHHHHHHHHTTCSEEE----EEECCTTC------------------C-CCCEEEECHHHHHHHHH
T ss_pred -CH---------HHHHHHHHHHHHcCCCEEE----EecCCcccccccccccccccccccccc-ccccccccchhHHHHHH
Confidence 11 2334556666667887775 67663210 0000 000 011 12223
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcC
Q 012041 262 EGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQD 341 (472)
Q Consensus 262 ~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~ 341 (472)
+.+++||+++ | .++.|++|+ |++||.++++++ .+.++++++.|||||++++
T Consensus 208 ~~v~avR~a~---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~ 258 (418)
T 3r4e_A 208 KLFEELRKTY---G--FDHHLLHDG-----------------------HHRYTPQEAANL-GKMLEPYQLFWLEDCTPAE 258 (418)
T ss_dssp HHHHHHHHHH---C--SSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEESCSCCS
T ss_pred HHHHHHHHHc---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEEECCCCcc
Confidence 4444444444 3 289999999 466889999987 5668999999999999999
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDN 421 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s 421 (472)
|++++++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++++..++.++
T Consensus 259 d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig 337 (418)
T 3r4e_A 259 NQEAFRLVRQHTVTPLAVGEI-FNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPTDLSPVT 337 (418)
T ss_dssp SGGGGHHHHHHCCSCEEECTT-CCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCTTSCHHH
T ss_pred CHHHHHHHHhcCCCCEEEcCC-cCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCCCccHHH
Confidence 999999999999999999997 5788999999999999999999999999999999999999999998765543367777
Q ss_pred HHHHHHHhhcCCC
Q 012041 422 FIADLSVGLASGQ 434 (472)
Q Consensus 422 ~~a~lAva~~~~~ 434 (472)
.++.++++...+.
T Consensus 338 ~aA~~hlaaa~pn 350 (418)
T 3r4e_A 338 MGCALHFDTWVPN 350 (418)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 6555555544443
No 23
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=100.00 E-value=3.9e-48 Score=403.26 Aligned_cols=319 Identities=14% Similarity=0.162 Sum_probs=238.1
Q ss_pred ceEEEEEEEEEecC----CCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhc
Q 012041 44 AKVKSVKARQIIDS----RGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPK 118 (472)
Q Consensus 44 m~I~~V~~~~v~~~----~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~ 118 (472)
|||++|+++.+-.. .++..++|+|+|| |+ +||||+.++. +. .+++...|++.++|.
T Consensus 2 MkIt~i~~~~~~~p~~~~~~~~~v~V~v~Td~G~----------~G~GE~~~~~------~~---~~~v~~~i~~~l~p~ 62 (433)
T 3rcy_A 2 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGI----------TGWGECYAAS------VG---PEAMRAVIEDVFARH 62 (433)
T ss_dssp CCEEEEEEEEECCCTTCTTCSCEEEEEEEETTSC----------EEEEEECCCS------SC---HHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEEEcCCCCccCCceEEEEEEEECCCC----------EEEEeccCCC------CC---HHHHHHHHHHHHHHH
Confidence 89999999887321 1457899999999 99 8999974321 22 244556677889999
Q ss_pred ccCCCCCCHHHHHHHHHHhcCCCCCCc-cchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEee---c
Q 012041 119 LVGVDIRDQAEVDAIMLEIDGTPNKSK-IGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVI---N 194 (472)
Q Consensus 119 LiG~d~~d~e~i~~~l~~~~~~~~~~~-~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~---~ 194 (472)
|+|+||.+++++|+.|++. ..++++. +.++|++||||||||++||.+|+|||+||| |+.++++|+ |+.+ +
T Consensus 63 LiG~dp~~ie~~~~~l~~~-~~~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~~ 136 (433)
T 3rcy_A 63 MEGENPENIELMFRRVYSS-GFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLG---GKMNPRIRA--YTYLYPLP 136 (433)
T ss_dssp TTTSCTTCHHHHHHHHHHT-TTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSSEEE--EEECCCCT
T ss_pred hCCCCcccHHHHHHHHHhc-ccccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeEEE--EEEEcccC
Confidence 9999999999999999863 2222222 346799999999999999999999999999 987788887 5543 2
Q ss_pred CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCC---CCCCcHHHHHHHHHHH
Q 012041 195 GGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAP---NVQDNREGLVLLTDAI 271 (472)
Q Consensus 195 gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~---~~~~~~~~l~~v~~av 271 (472)
|. +.... +..+++..+++.+...+||+++| .|.|...... . +..+ +++.+.+.+++||+++
T Consensus 137 g~-------~~~~~--~~~~e~~~~~a~~~~~~Gf~~iK----lk~g~~~~~~--~-G~~~~~~~~~~d~e~v~avR~av 200 (433)
T 3rcy_A 137 HH-------PITPF--WTSADMAAESAADCVARGYTAVK----FDPAGPYTLR--G-GHMPAMTDISLSVEFCRKIRAAV 200 (433)
T ss_dssp TS-------CHHHH--TTCHHHHHHHHHHHHHTTCSEEE----ECCSCCCBTT--C-CBCCCHHHHHHHHHHHHHHHHHH
T ss_pred Cc-------ccccC--CCCHHHHHHHHHHHHHcCCCEEE----EcCCCCcccc--c-CCCcchhhHHHHHHHHHHHHHHh
Confidence 20 00000 00112345566666667787665 5655321110 1 1112 1222334444444444
Q ss_pred HHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHh
Q 012041 272 EKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQS 351 (472)
Q Consensus 272 ~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~ 351 (472)
| .++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|++
T Consensus 201 ---G--~d~~L~vDa-----------------------n~~~t~~~A~~~-~~~Le~~~i~~iEeP~~~~~~~~~~~l~~ 251 (433)
T 3rcy_A 201 ---G--DKADLLFGT-----------------------HGQFTTAGAIRL-GQAIEPYSPLWYEEPVPPDNVGAMAQVAR 251 (433)
T ss_dssp ---T--TSSEEEECC-----------------------CSCBCHHHHHHH-HHHHGGGCCSEEECCSCTTCHHHHHHHHH
T ss_pred ---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHhhhcCCCEEECCCChhhHHHHHHHHh
Confidence 3 289999999 356789999987 56689999999999999999999999999
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
++++||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|+ .++.++.+++++++..
T Consensus 252 ~~~iPIa~dE~-~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv~~~-~h~-~~s~i~~aa~lhlaaa 328 (433)
T 3rcy_A 252 AVRIPVATGER-LTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMA-PHL-YAGPVEWAANVHFAAS 328 (433)
T ss_dssp HSSSCEEECTT-CCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTCEEC-CCC-SSCHHHHHHHHHHHHT
T ss_pred ccCCCEEecCC-CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEE-ecC-CCCHHHHHHHHHHHHH
Confidence 99999999997 67899999999999999999999999999999999999999999985 564 5888877777777665
Q ss_pred CCCc
Q 012041 432 SGQI 435 (472)
Q Consensus 432 ~~~i 435 (472)
.+.+
T Consensus 329 ~pn~ 332 (433)
T 3rcy_A 329 IPNI 332 (433)
T ss_dssp CTTB
T ss_pred hccC
Confidence 5443
No 24
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=100.00 E-value=3.4e-48 Score=402.09 Aligned_cols=285 Identities=14% Similarity=0.139 Sum_probs=219.1
Q ss_pred eEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcC-
Q 012041 62 TVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDG- 139 (472)
Q Consensus 62 ~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~- 139 (472)
+|+|||+|| |+ +||||+... .+...+.+.|++.|+|.|+|+||.+++.+|+.|.+...
T Consensus 75 ~VlVri~td~G~----------~G~GE~~~~----------~~~~~~~~~i~~~lap~liG~dp~~~~~i~~~l~~~~~~ 134 (412)
T 4h1z_A 75 SVLVRIETENGA----------VGWGETYGL----------VAPRATMEIIDDLLADFTIGRDPFDAAAIHDDLYDLMRV 134 (412)
T ss_dssp EEEEEEEETTCC----------EEEEEEECS----------SCHHHHHHHHHHTHHHHHTTSCGGGHHHHHHHHHTTTGG
T ss_pred cEEEEEEECCCC----------EEEEecCCC----------CCHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHh
Confidence 489999999 99 899998431 12345566788899999999999999999999986321
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHH
Q 012041 140 TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFA 219 (472)
Q Consensus 140 ~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~ 219 (472)
....+++..+|++||||||||+.||.+|+|||+||| |..++++|+ |++. . .. +. ..+..+
T Consensus 135 ~~~~~g~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---G~~~~~v~~--y~s~--~-~~----~~--------~~~~~~ 194 (412)
T 4h1z_A 135 RGYTGGFYVDALAAIDIALWDLAGKLAGLPVCKLLG---GQRRDRIAA--YISG--L-PE----DT--------RAKRAE 194 (412)
T ss_dssp GTCCSHHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCCCSEEEE--EECC--C-CC----SS--------HHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHcCCCHHHhcC---CCCCceEEE--Eecc--C-CC----Cc--------HHHHHH
Confidence 111122335699999999999999999999999999 988878876 4331 1 00 01 112234
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCccee
Q 012041 220 EALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYD 299 (472)
Q Consensus 220 ~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~ 299 (472)
.+.+...+||+++| .|.|. ..+.+.++++++|+++ | +++.|++|+
T Consensus 195 ~a~~~~~~G~~~~K----~k~g~-------------~~~~~~~~v~~vR~~~---g--~~~~l~vDa------------- 239 (412)
T 4h1z_A 195 LAAAWQAKGFSSFK----FASPV-------------ADDGVAKEMEILRERL---G--PAVRIACDM------------- 239 (412)
T ss_dssp HHHHHHHTTCCEEE----EEGGG-------------CTTCHHHHHHHHHHHH---C--SSSEEEEEC-------------
T ss_pred HHHHHHhcCcceec----ccccc-------------chhhHHHHHHHHHhcc---C--CeEEEEecc-------------
Confidence 44445556676554 44331 1133466677777666 3 289999999
Q ss_pred ecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCC
Q 012041 300 LNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSC 379 (472)
Q Consensus 300 ~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~ 379 (472)
|++||.++|+++ .+.++++++.|||||++++|++++++|++++++||++||+ +.++++++++++.+++
T Consensus 240 ----------N~~~~~~~A~~~-~~~l~~~~l~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~ 307 (412)
T 4h1z_A 240 ----------HWAHTASEAVAL-IKAMEPHGLWFAEAPVRTEDIDGLARVAASVSTAIAVGEE-WRTVHDMVPRVARRAL 307 (412)
T ss_dssp ----------CSCCCHHHHHHH-HHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSEEEECTT-CCSHHHHHHHHHTTCC
T ss_pred ----------ccCCCHHHHHHH-HHhhcccccceecCCCCccchHHHHHHHhhcCCccccCCc-ccchHhHHHHHHcCCC
Confidence 466889999988 5568999999999999999999999999999999999997 6789999999999999
Q ss_pred CEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 380 NGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 380 d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
|++|+|+++ ||||++++++++|+++|++|+ .|.+.|+.++.++.++++...+.+
T Consensus 308 div~~d~~~-GGit~~~kia~~A~~~gi~v~-~h~~~~~~i~~aa~lhl~aa~~~~ 361 (412)
T 4h1z_A 308 AIVQPEMGH-KGITQFMRIGAYAHVHHIKVI-PHATIGAGIFLAASLQASAALANV 361 (412)
T ss_dssp SEECCCHHH-HHHHHHHHHHHHHHHTTCEEC-CCCCSSCSHHHHHHHHHHHHCTTB
T ss_pred CEEEecCCC-CChHHHHHHHHHHHHCCCcEE-ecCCcchHHHHHHHHHHHHhCCCC
Confidence 999999985 999999999999999999985 565678877766666655544443
No 25
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=100.00 E-value=4.1e-48 Score=397.71 Aligned_cols=302 Identities=15% Similarity=0.185 Sum_probs=227.3
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+- .+.+ +..|+|+|+|| |+ +||||+... ......
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~i~td~G~----------~G~GE~~~~-------------~~~~~~ 57 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGT----------VGWGECLGP-------------ARPNAA 57 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEECSC-------------HHHHHH
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEEEEEEEEEEEEEECCCC----------EEEEEecCC-------------cchHHH
Confidence 999999998773 2333 45699999999 99 899997431 112234
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
+.+.++|.|+|+||.+++++|+.|.+........++..+|++|||+||||+.||.+|+|||+||| |+.++++|+ |
T Consensus 58 ~~~~~~~~liG~d~~~~e~~~~~l~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG---g~~~~~~~~--y 132 (378)
T 4hpn_A 58 VVQAYSGWLIGQDPRQTEKIWAVLYNALRDQGQRGLSLTALSGIDIALWDIKGKHYGASISMLLG---GRWRESVRA--Y 132 (378)
T ss_dssp HHHHHHTTTTTSCTTCHHHHHHHHHHHTCTTCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEE--E
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHhhhhccCccccccC---CccccCcce--e
Confidence 56789999999999999999999986432222223345799999999999999999999999999 988878877 5
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
++. +.... +.++ ..+..+++.+...+||+++| .|+|. +.+.+.+.++++|++
T Consensus 133 ~~~--~~~~~---~~~~------~~~~~~~~~~~~~~Gf~~~K----~k~g~-------------~~~~di~~v~avr~~ 184 (378)
T 4hpn_A 133 ATG--SFKRD---NVDR------VSDNASEMAERRAEGFHACK----IKIGF-------------GVEEDLRVIAAVREA 184 (378)
T ss_dssp EEC--CCBCT---TCCH------HHHHHHHHHHHHHTTCSEEE----EECCS-------------CHHHHHHHHHHHHHH
T ss_pred eee--ccccc---cchh------HHHHHHHHHHHHHhccceec----ccccC-------------ChHHHHHHHHHHHHh
Confidence 432 21110 0100 11234445555556665554 45441 122234445555554
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | +++.|++|+ |++||.++|+++ .+.+++|++.|||||++++|+++|++|+
T Consensus 185 ~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~l~ 235 (378)
T 4hpn_A 185 I---G--PDMRLMIDA-----------------------NHGYTVTEAITL-GDRAAGFGIDWFEEPVVPEQLDAYARVR 235 (378)
T ss_dssp H---T--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSCEECCSCTTCHHHHHHHH
T ss_pred c---C--CcEEEEEec-----------------------CcccCHHHHHHH-HhhhhhcccchhhcCCCccchhhhHHHH
Confidence 4 3 289999999 466889999988 4568999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH--HHHHHH
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNF--IADLSV 428 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~--~a~lAv 428 (472)
+++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|+++ ++|+ .++.++. ++|++.
T Consensus 236 ~~~~ipIa~dE~-~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v-~~h~-~~~~i~~aa~~h~~a 312 (378)
T 4hpn_A 236 AGQPIPVAGGET-WHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRI-VPHV-WGTGVQIAAALQFMA 312 (378)
T ss_dssp HHSSSCEEECTT-CCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEE-CCBC-CSSHHHHHHHHHHHH
T ss_pred hhCCceeeCCcC-ccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeE-EeCC-CCcHHHHHHHHHHHH
Confidence 999999999997 5778999999999999999999999999999999999999999996 7895 5676654 455555
Q ss_pred hhcCC
Q 012041 429 GLASG 433 (472)
Q Consensus 429 a~~~~ 433 (472)
++.+.
T Consensus 313 a~~~~ 317 (378)
T 4hpn_A 313 AMTPD 317 (378)
T ss_dssp HCCCS
T ss_pred HcCcc
Confidence 55443
No 26
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.3e-48 Score=398.54 Aligned_cols=306 Identities=16% Similarity=0.192 Sum_probs=236.3
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNI 111 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i 111 (472)
|||++|+++.+- .+.+ +..|+|+|+|||+ +||||+.++.. |.|.+++.+++...|
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~tdG~----------~G~GE~~~~~~---p~~~~e~~~~~~~~i 67 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYSEGL----------VGVGEGGSVGG---PVWSAECAETIKIIV 67 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEBTTB----------CCEEECCCSTT---TTTSSCCHHHHHHHH
T ss_pred CEEEEEEEEEEEcccCCceEccceEEEEEEEEEEEEEECCc----------EEEEEecCCCC---CccCcccHHHHHHHH
Confidence 899999998773 2332 4579999998898 89999876543 468888888888889
Q ss_pred HHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEE
Q 012041 112 NDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFN 191 (472)
Q Consensus 112 ~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 191 (472)
++.++|.|+|+||.+++.+|+.|.+.. . ...+|++|||+||||+.||.+|+|||+||| |..++.+|+ +.
T Consensus 68 ~~~l~p~liG~d~~~~~~~~~~~~~~~--~----~~~~A~said~AlwDl~gK~~g~Pl~~lLG---g~~~~~~~~--~~ 136 (370)
T 2chr_A 68 ERYLAPHLLGTDAFNVSGALQTMARAV--T----GNASAKAAVEMALLDLKARALGVSIAELLG---GPLRSAIPI--AW 136 (370)
T ss_dssp HHHTHHHHTTSCTTCHHHHHHHHHTTC--S----SCHHHHHHHHHHHHHHHHHHTTCCHHHHTT---CCSCSEEEB--EE
T ss_pred HHHHHHHhcCCCcccHHHHHHHHhhcc--c----ccHHHHHHHHHHHHHHHHHhcCCccccccC---Cccccccce--ee
Confidence 999999999999999999999987521 1 124799999999999999999999999999 988777776 33
Q ss_pred eecCCccCCCcccccceeeccCCcccHHHHHHHH-HHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 192 VINGGSHAGNNLAMQEFMILPVGATSFAEALRMG-SEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 192 ~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~-~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
.+..+. . .+...+..+.. ..+|+.+ |.|+|. .+..+.++.++..
T Consensus 137 ~~~~~~-------~---------~~~~~~~~~~~~~~g~~~~----K~Kvg~---------------~~~~~d~~~v~av 181 (370)
T 2chr_A 137 TLASGD-------T---------KRDLDSAVEMIERRRHNRF----KVKLGF---------------RSPQDDLIHMEAL 181 (370)
T ss_dssp EECSSC-------H---------HHHHHHHHHHHHTTSCCEE----EEECSS---------------SCHHHHHHHHHHH
T ss_pred eeccCc-------h---------hhhHHHHHHHHhhccccee----eccccc---------------CChHHHHHHHHHH
Confidence 322210 0 01122222211 1233333 244331 1124455555544
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
.+.+| +++.|++|+ |+.||.++|+++ .+.++++++.|||||++++|+++|++|+
T Consensus 182 r~~~g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~~~iEeP~~~~d~~~~~~l~ 235 (370)
T 2chr_A 182 SNSLG--SKAYLRVDV-----------------------NQAWDEQVASVY-IPELEALGVELIEQPVGRENTQALRRLS 235 (370)
T ss_dssp HHHTT--TTSEEEEEC-----------------------TTCCCTHHHHHH-HHHHHTTTCCEEECCSCSSCHHHHHHHH
T ss_pred HHhcC--CCcEEEecC-----------------------CCCCCHHHHHHH-HHHHHhcCCceecCCCChhhhhhhhHHh
Confidence 44443 389999999 456788999988 5568999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.+++++++.
T Consensus 236 ~~~~ipIa~dE~-~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~~~~i~~aa~~hlaa 313 (370)
T 2chr_A 236 DNNRVAIMADES-LSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT-MLDSTIGTSVALQLYS 313 (370)
T ss_dssp HHCSSEEEESSS-CCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCC-CSCCHHHHHHHHHHHT
T ss_pred hhccCCccCCcc-CCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCC-CcccHHHHHHHHHHHH
Confidence 999999999997 57899999999999999999999999999999999999999999987666 5688888777777766
Q ss_pred cCCCcc
Q 012041 431 ASGQIK 436 (472)
Q Consensus 431 ~~~~i~ 436 (472)
..+.+.
T Consensus 314 ~~p~~~ 319 (370)
T 2chr_A 314 TVPSLP 319 (370)
T ss_dssp TSSCCT
T ss_pred hCCCCC
Confidence 555543
No 27
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.2e-48 Score=397.33 Aligned_cols=308 Identities=17% Similarity=0.192 Sum_probs=243.0
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+. .+.+ +..++|+|+|| |+ +||||+.++.. |+|.+++.+++..
T Consensus 5 ~MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~~---~~~~~e~~~~~~~ 71 (383)
T 3i4k_A 5 DLTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGV----------IGYGEGVVPGG---PWWGGESVETMKA 71 (383)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEECCSSS---TTTTSCCHHHHHH
T ss_pred CCEEEEEEEEEEeccccCCeEecceEEEeeeEEEEEEEECCCC----------EEEEecccCCC---CccCCCCHHHHHH
Confidence 4999999998873 2322 35699999999 99 89999865421 3588888888888
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.|++.++|.|+|+||.+++++|+.|++... + ..+|++|||+||||+.||.+|+|||+||| |..++++|+.
T Consensus 72 ~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----~--~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v~~~- 141 (383)
T 3i4k_A 72 LVDGYLAPVLIGRAVSELAGIMADLERVVA----R--ARYAKAAVDVAMHDAWARSLNVPVRDLLG---GTVRDKVDVT- 141 (383)
T ss_dssp HHHHTTHHHHTTSBGGGHHHHHHHHHHHCC----S--CHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCSCSEEEBC-
T ss_pred HHHhhhhHHHcCCCccCHHHHHHHHHHHhc----C--CHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCeEEEe-
Confidence 898899999999999999999999986321 1 25799999999999999999999999999 9877788873
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
.+++.+ +. ++.++++.+...+ ||+++| .|+|. .+ ..++++.++
T Consensus 142 -~t~~~~-------~~---------~~~~~~a~~~~~~~G~~~~K----~Kvg~------------~~---~~~d~~~v~ 185 (383)
T 3i4k_A 142 -WALGVL-------PL---------DVAVAEIEERIEEFGNRSFK----LKMGA------------GD---PAEDTRRVA 185 (383)
T ss_dssp -EEECSC-------CH---------HHHHHHHHHHHHHHCCSEEE----EECCS------------SC---HHHHHHHHH
T ss_pred -EEeeCC-------CH---------HHHHHHHHHHHHhcCCcEEE----EeeCC------------CC---HHHHHHHHH
Confidence 233211 11 2334556665665 787665 66552 11 234444444
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
...+..| .++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++
T Consensus 186 avR~a~g--~~~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~ 239 (383)
T 3i4k_A 186 ELAREVG--DRVSLRIDI-----------------------NARWDRRTALHY-LPILAEAGVELFEQPTPADDLETLRE 239 (383)
T ss_dssp HHHHTTT--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHHHHTTCCEEESCSCTTCHHHHHH
T ss_pred HHHHHcC--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCChhhHHHHHH
Confidence 3333333 279999999 466889999987 56689999999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.++++++
T Consensus 240 l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hl 317 (383)
T 3i4k_A 240 ITRRTNVSVMADES-VWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT-SLEGPIGTAASLQF 317 (383)
T ss_dssp HHHHHCCEEEESTT-CSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC-SCCCHHHHHHHHHH
T ss_pred HHhhCCCCEEecCc-cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC-CCccHHHHHHHHHH
Confidence 99999999999997 67899999999999999999999999999999999999999999998777 46888877666666
Q ss_pred hhcCCCccc
Q 012041 429 GLASGQIKT 437 (472)
Q Consensus 429 a~~~~~i~~ 437 (472)
+...+.+..
T Consensus 318 aaa~p~~~~ 326 (383)
T 3i4k_A 318 AASTKAISY 326 (383)
T ss_dssp HHHCTTEEE
T ss_pred HHcCCCCCc
Confidence 655554443
No 28
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=3.6e-48 Score=402.16 Aligned_cols=323 Identities=15% Similarity=0.163 Sum_probs=244.0
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
.|||++|+++.+. +. .++++|+|+|| | + ||||+ +. +.+..++...|++ ++|.|+|
T Consensus 5 ~MkI~~i~~~~~~-~~-~~~v~V~v~td~G-~----------G~Ge~-~~---------g~~~~~~~~~i~~-l~p~liG 60 (410)
T 2qq6_A 5 APRITRVETAAIR-AV-GPSVLVRVWAGDE-H----------GLGEC-YP---------SAPAAGIHHIVMN-MEEQLLG 60 (410)
T ss_dssp CCCCCEEEEEEEC-CC--CEEEEEEEETTE-E----------EEEEE-CC---------CSCHHHHHHHHHT-THHHHTT
T ss_pred CceEeEEEEEEEC-CC-CCEEEEEEEECCc-E----------EEEEe-cC---------CCChHHHHHHHHH-HHHHhCC
Confidence 3999999999996 43 45899999999 6 3 88887 31 1235667777876 9999999
Q ss_pred CCCCCHHHHHHHHHHhc-CCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeec-C-Ccc
Q 012041 122 VDIRDQAEVDAIMLEID-GTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVIN-G-GSH 198 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~-~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~-g-g~~ 198 (472)
+||.+++.+|+.|.+.. .+.++++++.+|++||||||||++||.+|+|||+||| |..++++|+ |++++ | +.|
T Consensus 61 ~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~~~vp~--y~~~~~g~~~h 135 (410)
T 2qq6_A 61 EDPRDVERLYEKMRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLG---GAFRRRVRL--YADCNAGTVDA 135 (410)
T ss_dssp CCTTCHHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTT---CCSCSEEEE--EEECCCSEECT
T ss_pred CCccHHHHHHHHHHHhhhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCccCceeE--EEecccccccc
Confidence 99999999999998743 2223445567899999999999999999999999999 976666665 77665 4 455
Q ss_pred CCCcc-cccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc----CCCcccCCCCCCCCC--CCCCcHHHHHHHHHHH
Q 012041 199 AGNNL-AMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKY----GQDACNVGDEGGFAP--NVQDNREGLVLLTDAI 271 (472)
Q Consensus 199 ~~~~l-~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~----G~~~~~~~~~G~~~~--~~~~~~~~l~~v~~av 271 (472)
+++.+ ++++++..| ++.++++.+...+||+.+| .|. |..... ++|++.+ +++.+.+.++++|+++
T Consensus 136 ~~~~~~~~~~~~~~~--~~~~~~a~~~~~~Gf~~vK----ik~~~~~G~~~~~--~~G~~~~~~~~~~~~e~v~avRea~ 207 (410)
T 2qq6_A 136 AAHHIEGGLFEEGSN--EEYIAVAREAVERGFDAIK----LDVDDITGPLHRD--FWNGAISPREHEAMVARVAAVREAV 207 (410)
T ss_dssp TCCEEECCTTCSTHH--HHHHHHHHHHHHTTCSEEE----EECCCSSSTTCSC--SSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCH--HHHHHHHHHHHHcCCCEEE----eeccccCCcccCC--cCccccchhhHHHHHHHHHHHHHhc
Confidence 54433 344544333 3455667677777787665 444 321111 2444432 2222344555555544
Q ss_pred HHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHh
Q 012041 272 EKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQS 351 (472)
Q Consensus 272 ~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~ 351 (472)
| .++.|++|+| ++||.+++++++ +.+++|++.|||||++++|++++++|++
T Consensus 208 ---G--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l~~ 258 (410)
T 2qq6_A 208 ---G--PEVEVAIDMH-----------------------GRFDIPSSIRFA-RAMEPFGLLWLEEPTPPENLDALAEVRR 258 (410)
T ss_dssp ---C--SSSEEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHHHHT
T ss_pred ---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCCCeEECCCChhhHHHHHHHHh
Confidence 3 2799999993 457889999885 5689999999999999999999999999
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
++++||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++++ |.+. +.++.++.++++..
T Consensus 259 ~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~-h~~~-s~i~~aa~~hlaaa 335 (410)
T 2qq6_A 259 STSTPICAGEN-VYTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAP-HNVS-SPVGTVAAAHVCAA 335 (410)
T ss_dssp TCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCC-BCCS-CHHHHHHHHHHHHS
T ss_pred hCCCCEEeCCC-cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEee-cCCC-cHHHHHHHHHHHHh
Confidence 99999999997 568999999999999999999999999999999999999999999876 5454 87776665555544
Q ss_pred CCC
Q 012041 432 SGQ 434 (472)
Q Consensus 432 ~~~ 434 (472)
.+.
T Consensus 336 ~~~ 338 (410)
T 2qq6_A 336 VSN 338 (410)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
No 29
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=100.00 E-value=6.5e-48 Score=397.31 Aligned_cols=310 Identities=15% Similarity=0.192 Sum_probs=234.0
Q ss_pred ceEEEEEEEEEecCC----CCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhc
Q 012041 44 AKVKSVKARQIIDSR----GNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPK 118 (472)
Q Consensus 44 m~I~~V~~~~v~~~~----~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~ 118 (472)
|||++|+++.+.... .++.++|+|+|| |+ +||||+. .++++.++...+.+.++|.
T Consensus 3 MkI~~i~~~~~~~p~~~~~~~~~~~V~v~td~G~----------~G~GE~~----------~~~~~~~~~~~~~~~l~p~ 62 (393)
T 4dwd_A 3 LKIAKVEALSVAMGDGTGWMPTSAFVRITAEDGT----------VGWGEAS----------PMLGGIASLGVVARDIAPF 62 (393)
T ss_dssp CBEEEEEEEEEECCC-----CEEEEEEEEETTSC----------EEEEEEC----------CGGGGHHHHHHHHHHTHHH
T ss_pred CEEEEEEEEEEcCCCcccccceEEEEEEEECCCC----------EEEEEcc----------CcHHHHHHHHHHHHHHHHH
Confidence 999999999884321 045799999999 99 8999974 2334555534434559999
Q ss_pred ccCCCCCCHHHHHHHHHHhc-CCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCc
Q 012041 119 LVGVDIRDQAEVDAIMLEID-GTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGS 197 (472)
Q Consensus 119 LiG~d~~d~e~i~~~l~~~~-~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~ 197 (472)
|+|+||.+++++|+.|++.. ...+ +++..+|++||||||||++||.+|+|||+||| |..++++|+ |++++|+.
T Consensus 63 liG~d~~~~e~~~~~l~~~~~~~g~-~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~~v~~--y~s~~g~~ 136 (393)
T 4dwd_A 63 LEGQEVLDHAVLLDRMMHRLVKLGP-EGIATAALAACDIALWDLKGKLLGQPIYKLLG---GAWRTRLPC--YSSIGGNA 136 (393)
T ss_dssp HTTSBGGGHHHHHHHHHHHTGGGCC-TTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEE--EEEECCCS
T ss_pred HCCCCcccHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCceee--EEecCccC
Confidence 99999999999999998632 2111 23445899999999999999999999999999 987778876 65543221
Q ss_pred cCCCcccccceeeccCCcccHHHH-HHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCC
Q 012041 198 HAGNNLAMQEFMILPVGATSFAEA-LRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGY 276 (472)
Q Consensus 198 ~~~~~l~~~e~~~~p~~~~~~~~a-~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~ 276 (472)
. + ..++..+++ .+...+||+++| .|+|..... ...+.+.+.+.++++|+++ |
T Consensus 137 ~-----~--------~~e~~~~~a~~~~~~~G~~~~K----lKvG~~~~~------~~~~~~~d~~~v~avR~a~---g- 189 (393)
T 4dwd_A 137 A-----R--------SVDEVVREVARRVEAEQPAAVK----IRWDGDRTR------CDVDIPGDIAKARAVRELL---G- 189 (393)
T ss_dssp S-----S--------CHHHHHHHHHHHHHHHCCSEEE----EECCCCTTC------CSCCHHHHHHHHHHHHHHH---C-
T ss_pred C-----C--------CHHHHHHHHHHHHHHcCCCEEE----EccCCCCcc------cccCHHHHHHHHHHHHHHh---C-
Confidence 0 0 012334555 556667787665 666531100 0012233344444444444 3
Q ss_pred CCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCe
Q 012041 277 TGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQ 356 (472)
Q Consensus 277 ~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~p 356 (472)
.++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|++++++|
T Consensus 190 -~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iP 244 (393)
T 4dwd_A 190 -PDAVIGFDA-----------------------NNGYSVGGAIRV-GRALEDLGYSWFEEPVQHYHVGAMGEVAQRLDIT 244 (393)
T ss_dssp -TTCCEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCSEEECCSCTTCHHHHHHHHHHCSSE
T ss_pred -CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEEECCCCcccHHHHHHHHhhCCCC
Confidence 279999999 466889999987 5668999999999999999999999999999999
Q ss_pred EEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 357 LVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 357 I~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
|++||+ ++++++++++++.+ +|++|||++++||||++++++++|+++|++++ .|.+ ++.++.+++++++...+.+
T Consensus 245 Ia~dE~-~~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~~~i~~aa~~hlaaa~p~~ 319 (393)
T 4dwd_A 245 VSAGEQ-TYTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFV-PHQT-QPGVGHFANIHVLSTLMHM 319 (393)
T ss_dssp EEBCTT-CCSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEEC-CCCC-CSSHHHHHHHHHHHTCTTC
T ss_pred EEecCC-cCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEe-ecCC-CcHHHHHHHHHHHHhCCCc
Confidence 999997 67899999999999 99999999999999999999999999999986 5544 7888777777766555544
No 30
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=100.00 E-value=7.1e-48 Score=399.18 Aligned_cols=319 Identities=17% Similarity=0.162 Sum_probs=239.3
Q ss_pred ceEEEEEEEEEecCCCCC--eEEEEEEEC-CeeeeeccCCCcccccee-eeeccCCCCccCcchHHHHHHHHHHhhhhcc
Q 012041 44 AKVKSVKARQIIDSRGNP--TVEVDLITD-DLFRSAVPSGASTGIYEA-LELRDGDKSVYGGKGVLNAVKNINDILGPKL 119 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~--~v~V~I~td-G~~~~~~p~~~~~G~gEa-~~~~d~~~~~~~g~~~~~a~~~i~~~lap~L 119 (472)
|||++|+++.+..+.+++ +|+|+|+|| |+ +||||+ ... +.+.+++...|++ ++|.|
T Consensus 3 MkI~~i~~~~~~~~~~~~~~~v~V~v~td~G~----------~G~Ge~~~~~---------g~~~~~~~~~i~~-l~p~l 62 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSGQRPILVKVSTDEGI----------YGLGEAGIAY---------GVGGSAAAGILKD-YAALL 62 (403)
T ss_dssp CCEEEEEEEEECCCTTTCCCCEEEEEEETTSC----------EEEEEESCSS---------SSCHHHHHHHHHH-HHHHH
T ss_pred CeEEEEEEEEecCCCCCCccceEEEEEeCCCC----------EEEEeecCCC---------CCchHHHHHHHHH-HHHHc
Confidence 999999999997665555 689999999 99 899997 421 2234455666776 99999
Q ss_pred cCCCCCCHHHHHHHHHHhcC-CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEe-ec-C-
Q 012041 120 VGVDIRDQAEVDAIMLEIDG-TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNV-IN-G- 195 (472)
Q Consensus 120 iG~d~~d~e~i~~~l~~~~~-~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~-~~-g- 195 (472)
+|+||.+++++|+.|.+... +.++++++.+|++||||||||+.||.+|+|||+||| |..++++|+ |++ ++ |
T Consensus 63 ~G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~--y~~~i~~g~ 137 (403)
T 2ox4_A 63 IGEDPFNTEAIWEKLFKKTFWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLG---GKNREDLRV--YASQLQFGW 137 (403)
T ss_dssp TTCCTTCHHHHHHHHHHSSSGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSSEEE--EEECGGGCS
T ss_pred CCCCHHHHHHHHHHHHHhcccccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCceee--eEeeccCCc
Confidence 99999999999999986431 113344557899999999999999999999999999 976666665 766 55 4
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc------CCCcccCCCCCCCCC--CCCCcHHHHHHH
Q 012041 196 GSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKY------GQDACNVGDEGGFAP--NVQDNREGLVLL 267 (472)
Q Consensus 196 g~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~------G~~~~~~~~~G~~~~--~~~~~~~~l~~v 267 (472)
+.|+++.++.+ +.++++.+...+||+.+| .|. |.. -....|++.+ +++.+.+.++++
T Consensus 138 ~~~~~~~~~~e---------~~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~--~~s~~~g~~~~~~~~~~~e~v~av 202 (403)
T 2ox4_A 138 GKERKSKGRKE---------EYAEEALKAVAEGYDAVK----VDVLAHDRNGSR--EGVFLEGPLPSETIKIGVERVEAI 202 (403)
T ss_dssp SSSCCCCCSHH---------HHHHHHHHHHHTTCSEEE----ECCSSSCTTSCC--TTCCCSSSCCHHHHHHHHHHHHHH
T ss_pred cccccccCCHH---------HHHHHHHHHHHcCCCEEE----EeccccCCcccc--ccCcccCCCchHHHHHHHHHHHHH
Confidence 44554433332 234566666667787765 442 211 0011122221 112223444444
Q ss_pred HHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHH
Q 012041 268 TDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 268 ~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~ 347 (472)
|+++ | .++.|++|+| ++|+.+++++++ +.+++|++.|||||++++|+++++
T Consensus 203 r~av---G--~d~~l~vDan-----------------------~~~~~~~ai~~~-~~l~~~~i~~iE~P~~~~d~~~~~ 253 (403)
T 2ox4_A 203 RNAV---G--PDVDIIVENH-----------------------GHTDLVSAIQFA-KAIEEFNIFFYEEINTPLNPRLLK 253 (403)
T ss_dssp HHHH---C--TTSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCEEEEECCSCTTSTHHHH
T ss_pred HHHh---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHhhCCCEEeCCCChhhHHHHH
Confidence 4444 3 2899999993 557889999885 568999999999999999999999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++++++||++||+. +++++++++++.+++|+++||++++||||++++++++|+++|+++|+ |.+ ++.++.++.++
T Consensus 254 ~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~-h~~-~s~i~~aa~~h 330 (403)
T 2ox4_A 254 EAKKKIDIPLASGERI-YSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQA-HVA-GTGVAEAASLH 330 (403)
T ss_dssp HHHHTCCSCEEECTTC-CHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECC-CCC-SCHHHHHHHHH
T ss_pred HHHHhCCCCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEee-cCC-CCHHHHHHHHH
Confidence 9999999999999974 56999999999999999999999999999999999999999999876 544 48777666666
Q ss_pred HhhcCCC
Q 012041 428 VGLASGQ 434 (472)
Q Consensus 428 va~~~~~ 434 (472)
++...+.
T Consensus 331 laaa~~~ 337 (403)
T 2ox4_A 331 AEIAIPN 337 (403)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 6554444
No 31
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=100.00 E-value=1.5e-47 Score=396.91 Aligned_cols=320 Identities=13% Similarity=0.111 Sum_probs=235.5
Q ss_pred ceEEEEEEEEEecC----CCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhc
Q 012041 44 AKVKSVKARQIIDS----RGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPK 118 (472)
Q Consensus 44 m~I~~V~~~~v~~~----~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~ 118 (472)
|||++|+++.+-.. .++..++|+|+|| |+ +||||+..+ .+.+ +++...|++.++|.
T Consensus 1 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~----------~G~GE~~~~------~~~~---~~~~~~i~~~l~p~ 61 (412)
T 4e4u_A 1 MKIVSLETHIVAVPPPHVGGMYWIFVKLKTDDGI----------EGVGEIYSA------TFGP---KAMAPIIDDVFERH 61 (412)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSC----------EEEEEECCC------SSCH---HHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEccCCCccCCCceEEEEEEECCCC----------EEEEeecCC------CCCH---HHHHHHHHHHhHHH
Confidence 89999999988432 1356799999999 99 899998431 1222 34556677789999
Q ss_pred ccCCCCCCHHHHHHHHHHhcCCCCC-CccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCc
Q 012041 119 LVGVDIRDQAEVDAIMLEIDGTPNK-SKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGS 197 (472)
Q Consensus 119 LiG~d~~d~e~i~~~l~~~~~~~~~-~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~ 197 (472)
|+|+||.+++++|+.|++.. .+.+ +....+|++||||||||++||.+|+|||+||| |+.++++|+ |+++..+.
T Consensus 62 LiG~dp~~~e~~~~~l~~~~-~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--yas~~~~~ 135 (412)
T 4e4u_A 62 LLNRDPHHVERLFRQAYSSG-FTQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLG---GRIHERLRS--YTYLYPKN 135 (412)
T ss_dssp TTTSCTTCHHHHHHHHHHTT-TCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEE--EEECCCBC
T ss_pred hCCCChhHHHHHHHHHHHhh-hhcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeEE--EEeccCCc
Confidence 99999999999999997632 1211 12235799999999999999999999999999 987778887 54332110
Q ss_pred cCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCC---CCCcHHHHHHHHHHHHHh
Q 012041 198 HAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPN---VQDNREGLVLLTDAIEKA 274 (472)
Q Consensus 198 ~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~---~~~~~~~l~~v~~av~~~ 274 (472)
...... +..+++..+++.+...+||+++| .|.|.... +..| ..+. ++.+.+.+++||+++
T Consensus 136 -~~~~~~------~~~~e~~~~~a~~~~~~G~~~iK----lK~g~~~~--~~~g-~~~~~~~~~~d~~~v~avR~a~--- 198 (412)
T 4e4u_A 136 -AKGEYD------YDDPDLAAECAAENVKLGFTAVK----FDPAGPYT--AYSG-HQLSLEVLDRCELFCRRVREAV--- 198 (412)
T ss_dssp -TTSCBC------SSCHHHHHHHHHHHHHHTCSEEE----ECCSCCCB--TTCC-BCCCHHHHHHHHHHHHHHHHHH---
T ss_pred -cccccc------CCCHHHHHHHHHHHHHcCCCEEE----ECCCCCCc--cccc-cccchhhHHHHHHHHHHHHHHh---
Confidence 000000 01112345566666677887765 56553211 1111 1111 222334444444444
Q ss_pred CCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC
Q 012041 275 GYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD 354 (472)
Q Consensus 275 g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~ 354 (472)
| .++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|+++++
T Consensus 199 G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~ 252 (412)
T 4e4u_A 199 G--SKADLLFGT-----------------------HGQMVPSSAIRL-AKRLEKYDPLWFEEPVPPGQEEAIAQVAKHTS 252 (412)
T ss_dssp T--TSSEEEECC-----------------------CSCBCHHHHHHH-HHHHGGGCCSEEECCSCSSCHHHHHHHHHTCS
T ss_pred C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHhhhcCCcEEECCCChhhHHHHHHHHhhCC
Confidence 3 289999999 466889999987 56689999999999999999999999999999
Q ss_pred CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCC
Q 012041 355 IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQ 434 (472)
Q Consensus 355 ~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~ 434 (472)
+||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|. .++.++.+++++++...+.
T Consensus 253 iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~v~-~h~-~~s~i~~aa~~hlaaa~pn 329 (412)
T 4e4u_A 253 IPIATGER-LTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHYAQIA-PHL-YNGPVGAAASIQLATCTPN 329 (412)
T ss_dssp SCEEECTT-CCHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCEEC-CCC-CSCHHHHHHHHHHHHTCTT
T ss_pred CCEEecCc-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE-ecC-CCcHHHHHHHHHHHHhCCC
Confidence 99999997 57899999999999999999999999999999999999999999974 564 4677776666666654444
No 32
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=100.00 E-value=7.1e-48 Score=395.20 Aligned_cols=305 Identities=19% Similarity=0.230 Sum_probs=236.8
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. ++.+ +..++|+|+|| |+ +||||+.+. +.|.+++.+++...
T Consensus 3 MkI~~i~~~~~~~Pl~~p~~~a~~~~~~~~~~~V~v~td~G~----------~G~Ge~~~~-----~~~~get~~~~~~~ 67 (379)
T 3r0u_A 3 SKIIDIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGV----------KGYGVAPAT-----TAITGDTLQGMQYI 67 (379)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEEECC-----HHHHCCCHHHHHHH
T ss_pred CEEEEEEEEEEEeecCCceEccCceEEEeEEEEEEEEECCCC----------EEEEEEECC-----CCccCCCHHHHHHH
Confidence 899999988773 2332 35799999999 99 899998653 24677788888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+||.+++++|+.|++.. ....+|++|||+||||+.||.+|+|||+||| |. ++++|+ |
T Consensus 68 i~~~l~p~l~G~d~~~~~~~~~~~~~~~------~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~-r~~v~~--y 135 (379)
T 3r0u_A 68 IREIFAPVILGSDLSDYKQTLELAFKKV------MFNSAAKMAIDLAYHDLLAKEQDISVAKLLG---AK-ANSIVT--D 135 (379)
T ss_dssp HHHTTHHHHTTCBGGGHHHHHHHHHTTC------SSCHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-CCEEEB--C
T ss_pred HHHHhHHHhcCCCcccHHHHHHHHHHhc------ccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCeEEE--E
Confidence 8888999999999999999999987521 1235799999999999999999999999999 97 678887 4
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
.+++.+ +. ++.++++.+...+||+.+| .|+|. +.+.+.+.+++||++
T Consensus 136 ~t~g~~-------~~---------e~~~~~a~~~~~~Gf~~~K----lK~g~-------------~~~~d~~~v~avR~a 182 (379)
T 3r0u_A 136 VSISCG-------NV---------AETIQNIQNGVEANFTAIK----VKTGA-------------DFNRDIQLLKALDNE 182 (379)
T ss_dssp EEECCC-------CH---------HHHHHHHHHHHHTTCCEEE----EECSS-------------CHHHHHHHHHHHHHH
T ss_pred EEecCC-------CH---------HHHHHHHHHHHHcCCCEEe----eecCC-------------CHHHHHHHHHHHHHh
Confidence 333211 11 2334555555566776664 56541 112234444444443
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhh--CCeeEEeCCCCcCCHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRD--FPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~--~~l~~iEdP~~~~D~~~~~~ 348 (472)
.| +++.|++|+ |++||.++++++ .+.+++ +++.|||||++++|++++++
T Consensus 183 ---~g--~~~~L~vDa-----------------------N~~w~~~~A~~~-~~~l~~~~~~l~~iEeP~~~~d~~~~~~ 233 (379)
T 3r0u_A 183 ---FS--KNIKFRFDA-----------------------NQGWNLAQTKQF-IEEINKYSLNVEIIEQPVKYYDIKAMAE 233 (379)
T ss_dssp ---CC--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHHTSCCCEEEEECCSCTTCHHHHHH
T ss_pred ---cC--CCCeEEEeC-----------------------CCCcCHHHHHHH-HHHHhhcCCCcEEEECCCCcccHHHHHH
Confidence 33 279999999 466889999987 566899 89999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.|+.++.++.+++
T Consensus 234 l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hl 311 (379)
T 3r0u_A 234 ITKFSNIPVVADES-VFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGC-MMESPAGILATASF 311 (379)
T ss_dssp HHHHCSSCEEESTT-CSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHHH
T ss_pred HHhcCCCCEEeCCc-cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeC-CCccHHHHHHHHHH
Confidence 99999999999997 67899999999999999999999999999999999999999999997655 57888766555555
Q ss_pred hhcCCCcccCCC
Q 012041 429 GLASGQIKTGAP 440 (472)
Q Consensus 429 a~~~~~i~~g~~ 440 (472)
++. +.+..-++
T Consensus 312 aaa-p~~~~~el 322 (379)
T 3r0u_A 312 ALA-EDITVADL 322 (379)
T ss_dssp HHH-TTCCCBCC
T ss_pred HhC-CCCCeeec
Confidence 444 44443344
No 33
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=100.00 E-value=1.3e-47 Score=396.69 Aligned_cols=324 Identities=12% Similarity=0.136 Sum_probs=234.6
Q ss_pred CceEEEEEEEEEecC----CCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhh
Q 012041 43 SAKVKSVKARQIIDS----RGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGP 117 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~----~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap 117 (472)
+|||++|+++.+-.. .++..++|+|+|| |+ +||||+..+ .+. ...+...|++.++|
T Consensus 1 ~MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~----------~G~GE~~~~------~~~---~~~~~~~i~~~l~p 61 (404)
T 4e5t_A 1 SMRLSDIETFVVGNPPPRHGGRYFIFVKLVTACGI----------TGYGEIYNA------TFG---PDLVAKMAEDVFAR 61 (404)
T ss_dssp -CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSC----------EEEEEECCC------SSC---HHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEEeccCCcccCCCceEEEEEEECCCC----------EEEEeeccC------CCc---hHHHHHHHHHHHHH
Confidence 399999999988432 1356799999999 99 899998431 122 23455567778899
Q ss_pred cccCCCCCCHHHHHHHHHHhcCCCCC-CccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCC
Q 012041 118 KLVGVDIRDQAEVDAIMLEIDGTPNK-SKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGG 196 (472)
Q Consensus 118 ~LiG~d~~d~e~i~~~l~~~~~~~~~-~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg 196 (472)
.|+|+||.+++++|+.|++.. .+.+ +....+|++||||||||++||.+|+|||+||| |+.++++|+ |++++..
T Consensus 62 ~liG~dp~~~e~~~~~~~~~~-~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~ 135 (404)
T 4e5t_A 62 QFAGEDPHHIEKLWHKTYGAG-YTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLG---GKVHERLRS--YTYLYPT 135 (404)
T ss_dssp HTTTSCTTCHHHHHHHHHTTT-SCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEE--EEECCC-
T ss_pred HhcCCChhHHHHHHHHHHHhh-hhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcC---CCCcCeEEE--EEEeccc
Confidence 999999999999999997521 1211 12225799999999999999999999999999 987788887 4432110
Q ss_pred c---cCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCC---CCCcHHHHHHHHHH
Q 012041 197 S---HAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPN---VQDNREGLVLLTDA 270 (472)
Q Consensus 197 ~---~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~---~~~~~~~l~~v~~a 270 (472)
. +-+...... +...++..+++.+..++||+++| .|.|.... +..|. .+. ++.+.+.++++|++
T Consensus 136 ~~~~~p~~d~~~~----~~~~e~~~~~a~~~~~~G~~~~K----lK~g~~~~--~~~g~-~~~~~~~~~d~~~v~avR~a 204 (404)
T 4e5t_A 136 DGDVYPDPDKPNV----YNDADMAAEAAAKAVDQGFTAVK----FDPAGAYT--IYDGH-QPSLEDLERSEAFCKQIRAA 204 (404)
T ss_dssp ---------CCCT----TTCHHHHHHHHHHHHHHTCSEEE----ECCSCCCB--TTCSB-CCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccc----CCCHHHHHHHHHHHHHcCCCEEe----eCCCCCCc--ccccc-cccHHHHHHHHHHHHHHHHH
Confidence 0 000000000 01112345556666677887665 56553211 11111 111 22233444444444
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | .++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|+
T Consensus 205 ~---G--~d~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~~~~~~~~l~ 255 (404)
T 4e5t_A 205 V---G--TKADLLFGT-----------------------HGQFTVSGAKRL-ARRLEAYDPLWFEEPIPPEKPEDMAEVA 255 (404)
T ss_dssp H---G--GGSEEEECC-----------------------CSCBCHHHHHHH-HHHHGGGCCSEEECCSCTTCHHHHHHHH
T ss_pred c---C--CCCeEEEeC-----------------------CCCcCHHHHHHH-HHHHhhcCCcEEECCCCcccHHHHHHHH
Confidence 4 3 279999999 466889999987 5668999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|+++ .+|. .++.++.+++++++.
T Consensus 256 ~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~~-~~h~-~~s~i~~aa~~hlaa 332 (404)
T 4e5t_A 256 RYTSIPVATGER-LCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAECHSAQI-APHL-YCGPLVALANIQLAT 332 (404)
T ss_dssp HHCSSCEEECTT-CCHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEE-CCCC-SSCHHHHHHHHHHHH
T ss_pred hhCCCCEEeCCC-cCCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCEE-eecC-CCcHHHHHHHHHHHH
Confidence 999999999997 5789999999999999999999999999999999999999999997 4664 467777666666665
Q ss_pred cCCC
Q 012041 431 ASGQ 434 (472)
Q Consensus 431 ~~~~ 434 (472)
..+.
T Consensus 333 a~p~ 336 (404)
T 4e5t_A 333 CSPN 336 (404)
T ss_dssp TCTT
T ss_pred hCCC
Confidence 4444
No 34
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=100.00 E-value=1e-47 Score=391.23 Aligned_cols=303 Identities=17% Similarity=0.220 Sum_probs=240.9
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. ++.+ ++.++|+|+|| |+ +||||+.+. ++|.+++.+++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-----~~~~ge~~~~~~~~ 65 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGL----------VGYGEGGPG-----IFITGETLAGTLET 65 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEECCC-----TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEEeeceEEEEEEEECCCC----------EEEEeecCC-----CCcCCCCHHHHHHH
Confidence 899999998873 2222 35699999999 99 899998643 24677888888887
Q ss_pred HHHhhh---hcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeee
Q 012041 111 INDILG---PKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPV 187 (472)
Q Consensus 111 i~~~la---p~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~ 187 (472)
|+ .++ |.|+|+||.+++++|+.|. . ...+|++|||+||||+.||.+|+|||+||| | .++++|+
T Consensus 66 i~-~l~~~~p~l~G~d~~~~~~~~~~l~--~-------~~~~A~~aid~AlwDl~gk~~g~Pl~~llG---g-~~~~v~~ 131 (354)
T 3jva_A 66 IE-LFGQAIIGLNPFNIEKIHEVMDKIS--A-------FAPAAKAAIDIACYDLMGQKAQLPLYQLLG---G-YDNQVIT 131 (354)
T ss_dssp HH-HHHTTSTTCCTTCHHHHHHHHHHHC--S-------SCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---C-SCSEEEC
T ss_pred HH-HHhhcCccccCCCcccHHHHHHHHh--c-------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhh---c-cCCeeee
Confidence 87 799 9999999999999998886 1 124799999999999999999999999999 9 4567886
Q ss_pred eEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHH
Q 012041 188 PAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLL 267 (472)
Q Consensus 188 ~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v 267 (472)
.. + ++.+ ..++..+++.+...+||+++| .|+|.. + +.+.+.++++
T Consensus 132 ~~-~-~~~~----------------~~~~~~~~a~~~~~~G~~~~K----~K~g~~-----------~--~~d~~~v~av 176 (354)
T 3jva_A 132 DI-T-LGID----------------EPNVMAQKAVEKVKLGFDTLK----IKVGTG-----------I--EADIARVKAI 176 (354)
T ss_dssp CE-E-ECSC----------------CHHHHHHHHHHHHHTTCSEEE----EECCSC-----------H--HHHHHHHHHH
T ss_pred eE-E-eCCC----------------CHHHHHHHHHHHHHhCCCeEE----EEeCCC-----------H--HHHHHHHHHH
Confidence 32 2 2111 112335566666667787665 565521 1 2234555555
Q ss_pred HHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHH
Q 012041 268 TDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 268 ~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~ 347 (472)
|+++ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|+++++
T Consensus 177 R~a~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~L~~~~i~~iEqP~~~~d~~~~~ 227 (354)
T 3jva_A 177 REAV---G--FDIKLRLDA-----------------------NQAWTPKDAVKA-IQALADYQIELVEQPVKRRDLEGLK 227 (354)
T ss_dssp HHHH---C--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHTTTSCEEEEECCSCTTCHHHHH
T ss_pred HHHc---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCChhhHHHHH
Confidence 5544 3 289999999 456889999988 4568999999999999999999999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++++++||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|+++|++|+.+|+.++.+++++
T Consensus 228 ~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~h 306 (354)
T 3jva_A 228 YVTSQVNTTIMADES-CFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETTIGITAAAH 306 (354)
T ss_dssp HHHHHCSSEEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHhCCCCEEEcCC-cCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCCcccHHHHHHHHH
Confidence 999999999999997 6889999999999999999999999999999999999999999999988866599988877777
Q ss_pred HhhcCCCcccCCC
Q 012041 428 VGLASGQIKTGAP 440 (472)
Q Consensus 428 va~~~~~i~~g~~ 440 (472)
++...+++....+
T Consensus 307 laaa~~~~~~~e~ 319 (354)
T 3jva_A 307 LAAAQKNITRADL 319 (354)
T ss_dssp HHHHCTTEEEECC
T ss_pred HHhcCCCCCcccc
Confidence 7766666655444
No 35
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=100.00 E-value=1.6e-47 Score=398.07 Aligned_cols=314 Identities=17% Similarity=0.209 Sum_probs=231.5
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
.|||++|++..+ ..+++.|+|+|+|| |+ +||||+.. .++. ..+...|++.++|.|+|
T Consensus 22 ~mkIt~v~~~~~--~~~~~~v~V~v~td~Gi----------~G~GE~~~---------~g~~-~~~~~~l~~~l~p~LiG 79 (426)
T 4e4f_A 22 SMKIVSAEVFVT--CPGRNFVTLKITTDSGL----------TGLGDATL---------NGRE-LPVASYLNDHVCPQLIG 79 (426)
T ss_dssp CCBEEEEEEEEE--CSSSCEEEEEEEETTSC----------EEEEECCC---------TTCH-HHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEE--cCCCCEEEEEEEECCCC----------EEEEeccc---------CCCc-HHHHHHHHHHHHHHHcC
Confidence 499999998755 33567899999999 99 89999742 2222 23456688889999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
+||.+++++|+.|++.. .++.+.+..+|++||||||||++||.+|+|||+||| |+.++++|++. ...+.
T Consensus 80 ~dp~~ie~i~~~l~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~--~~~~~----- 148 (426)
T 4e4f_A 80 RDAHQIEDIWQYFYKGA-YWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLG---GASRTGVMVYC--HTTGH----- 148 (426)
T ss_dssp SBTTCHHHHHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEEEE--EECCS-----
T ss_pred CChhhHHHHHHHHHhhc-cccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCceeEeE--eCCCC-----
Confidence 99999999999998632 233333445799999999999999999999999999 98877888743 32211
Q ss_pred cccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCccc----C--CCCCCCCCCC----C------------C
Q 012041 202 NLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACN----V--GDEGGFAPNV----Q------------D 259 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~----~--~~~G~~~~~~----~------------~ 259 (472)
+. .+..+++.+...+||+++| +|+|..... . +..-.+.+.. + .
T Consensus 149 --~~---------~~~~~~~~~~~~~Gf~~iK----ikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (426)
T 4e4f_A 149 --SI---------DEVLDDYAKHRDQGFKAIR----VQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDF 213 (426)
T ss_dssp --SH---------HHHHHHHHHHHHTTCSEEE----ECC-------------------CCSEESSSCCEEEECHHHHHHH
T ss_pred --CH---------HHHHHHHHHHHHcCCCEEE----EeccCCccccccccccccccccccccccccccccccchhHHHHH
Confidence 11 1234555556667887765 666532100 0 0000000100 0 0
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCC
Q 012041 260 NREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFD 339 (472)
Q Consensus 260 ~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~ 339 (472)
+.+.+++||+++ | .++.|++|+ |++||.++++++ .+.++++++.|||||++
T Consensus 214 ~~e~v~avR~a~---G--~d~~L~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~ 264 (426)
T 4e4f_A 214 TPKLFEAVRDKF---G--FNEHLLHDM-----------------------HHRLTPIEAARF-GKSVEDYRLFWMEDPTP 264 (426)
T ss_dssp HHHHHHHHHHHH---T--TSSEEEEEC-----------------------TTCSCHHHHHHH-HHHTGGGCCSEEECCSC
T ss_pred HHHHHHHHHHHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCCCEEECCCC
Confidence 123455555544 3 289999999 466889999987 56689999999999999
Q ss_pred cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC-CCCC
Q 012041 340 QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHR-SGET 418 (472)
Q Consensus 340 ~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~-~~Et 418 (472)
++|++++++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++ +|. +.++
T Consensus 265 ~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v~-~h~~~~~s 342 (426)
T 4e4f_A 265 AENQACFRLIRQHTVTPIAVGEV-FNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTG-SHGPSDLS 342 (426)
T ss_dssp CSSGGGGHHHHTTCCSCEEECTT-CCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEE-ECCCTTSC
T ss_pred hHHHHHHHHHHhcCCCCEEeCCC-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe-eeCCCCcc
Confidence 99999999999999999999997 56789999999999999999999999999999999999999999975 564 4577
Q ss_pred hhhHHHHHHHhhcCCCc
Q 012041 419 EDNFIADLSVGLASGQI 435 (472)
Q Consensus 419 ~~s~~a~lAva~~~~~i 435 (472)
.++.++.++++...+++
T Consensus 343 ~i~~aa~~hlaaa~pn~ 359 (426)
T 4e4f_A 343 PICMAAALHFDLWVPNF 359 (426)
T ss_dssp HHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 77665555555544443
No 36
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=100.00 E-value=1e-47 Score=393.66 Aligned_cols=305 Identities=17% Similarity=0.192 Sum_probs=238.0
Q ss_pred ceEEEEEEEEEec--------CC----CCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQIID--------SR----GNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~~--------~~----~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+.. +. .+..++|+|+ | |+ +||||+.++.. |+|.+++.+++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~----------~G~GE~~~~~~---~~~~~e~~~~~~~~ 66 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGL----------VGVGEGGSVGG---PVWSAECAETIKII 66 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBC-SSSC----------BCCEECCCBTT---BTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEccCCCCeEccceEEeeeeEEEEEEE-ECCc----------EEEEccccCCC---CCCCCCCHHHHHHH
Confidence 8999999887731 11 2456999999 9 99 89999865422 36888888888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+||.+++++|+.|++... + ..+|++||||||||+.||.+|+|||+||| |..++++|+ |
T Consensus 67 i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----g--~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~--~ 135 (370)
T 1chr_A 67 VERYLAPHLLGTDAFNVSGALQTMARAVT----G--NASAKAAVEMALLDLKARALGVSIAELLG---GPLRSAIPI--A 135 (370)
T ss_dssp HHHHTHHHHTTSCTTCHHHHHHHHHHHCS----S--CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEB--E
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHHhc----C--cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeE--E
Confidence 98889999999999999999999986321 1 25799999999999999999999999999 987788887 3
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGS-EVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~-~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
.+++.+. . .+.++++.+... +||+++| .|+|. .+.+.+.+.++++|+
T Consensus 136 ~t~~~~~-------~---------~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~v~avR~ 183 (370)
T 1chr_A 136 WTLASGD-------T---------KRDLDSAVEMIERRRHNRFK----VKLGF------------RSPQDDLIHMEALSN 183 (370)
T ss_dssp EEECSSS-------H---------HHHHHHHHHHHHTTCCCEEE----EECSS------------SCSHHHHHHHHHHHH
T ss_pred EEecCCC-------c---------HHHHHHHHHHHHHCCCCEEE----EecCC------------CCHHHHHHHHHHHHH
Confidence 3332220 1 123344544444 4665554 56542 112223444444444
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
+ .| .++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|
T Consensus 184 ~---~g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~~~~~~~~l 234 (370)
T 1chr_A 184 S---LG--SKAYLRVDV-----------------------NQAWDEQVASVY-IPELEALGVELIEQPVGRENTQALRRL 234 (370)
T ss_dssp H---SS--TTCCEEEEC-----------------------TTCCCTTHHHHH-THHHHTTTEEEEECCSCTTCHHHHHHH
T ss_pred h---cC--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCcccHHHHHHH
Confidence 3 33 269999999 356778899987 566899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.+++++++
T Consensus 235 ~~~~~iPia~dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~aa~~hla 312 (370)
T 1chr_A 235 SDNNRVAIMADES-LSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT-MLDSTIGTSVALQLY 312 (370)
T ss_dssp HHHSCSEEEESSS-CCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECC-SCCTTHHHHHHHHHH
T ss_pred HhhCCCCEEeCCC-cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecC-CCccHHHHHHHHHHH
Confidence 9999999999997 67899999999999999999999999999999999999999999998766 578888877777766
Q ss_pred hcCCCcc
Q 012041 430 LASGQIK 436 (472)
Q Consensus 430 ~~~~~i~ 436 (472)
...+++.
T Consensus 313 aa~~~~~ 319 (370)
T 1chr_A 313 STVPSLP 319 (370)
T ss_dssp TTSSCCT
T ss_pred HhCCCCc
Confidence 6555543
No 37
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=100.00 E-value=3.1e-47 Score=391.68 Aligned_cols=302 Identities=17% Similarity=0.188 Sum_probs=237.3
Q ss_pred ceEEEEEEEEEec--------CCC-----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 44 AKVKSVKARQIID--------SRG-----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~~--------~~~-----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
|||++|+++.+.- +.+ +..++|+|+|| |+ +||||+.++. .|. ++.+++.+
T Consensus 8 mkI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~-----~~~-e~~~~~~~ 71 (385)
T 3i6e_A 8 QKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGA----------EGFGEASPWA-----VFT-GTPEASYA 71 (385)
T ss_dssp SBEEEEEEEEEECCC--------------CEEEEEEEEETTSC----------EEEEEECCCT-----TTT-CCHHHHHH
T ss_pred cEEEEEEEEEEecccCCCeeccCcEEeceeeEEEEEEEECCCC----------EEEEeeccCC-----CcC-CCHHHHHH
Confidence 8999999988842 222 34699999999 99 8999986542 233 56777888
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.|++.++|.|+|+|+.+++++|+.|++.-. -..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 72 ~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~------~~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~r~~v~~-- 140 (385)
T 3i6e_A 72 ALDRYLRPLVIGRRVGDRVAIMDEAARAVA------HCTEAKAALDSALLDLAGRISNLPVWALLG---GKCRDTIPL-- 140 (385)
T ss_dssp HHHHTTHHHHTTCBGGGHHHHHHHHHHHSS------SCHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEB--
T ss_pred HHHHHHHHHHCCCCccCHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---cccCCceEE--
Confidence 888889999999999999999999986321 125799999999999999999999999999 987778887
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
|.+++.+ +. .+.++++.+...+||+++| .|+|. .+++.+.+.++++|+
T Consensus 141 ~~t~~~~-------~~---------~~~~~~a~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~v~avR~ 188 (385)
T 3i6e_A 141 SCSIANP-------DF---------DADIALMERLRADGVGLIK----LKTGF------------RDHAFDIMRLELIAR 188 (385)
T ss_dssp EEEECCS-------SH---------HHHHHHHHHHHHHTCCEEE----EECSS------------SCHHHHHHHHHHHHH
T ss_pred EEEcCCC-------CH---------HHHHHHHHHHHHcCCCEEE----EecCC------------CCHHHHHHHHHHHHH
Confidence 4333211 11 2334556666667787665 56552 112223444444444
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
++ +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|
T Consensus 189 a~------~~~~l~vDa-----------------------n~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~d~~~~~~l 238 (385)
T 3i6e_A 189 DF------PEFRVRVDY-----------------------NQGLEIDEAVPR-VLDVAQFQPDFIEQPVRAHHFELMARL 238 (385)
T ss_dssp HC------TTSEEEEEC-----------------------TTCCCGGGHHHH-HHHHHTTCCSCEECCSCTTCHHHHHHH
T ss_pred hC------CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCcccHHHHHHH
Confidence 43 478999999 356788899987 556899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.++.++++
T Consensus 239 ~~~~~iPIa~dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~~aa~~hla 316 (385)
T 3i6e_A 239 RGLTDVPLLADES-VYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGD-MFEAGLAHLAGTHMI 316 (385)
T ss_dssp HTTCSSCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHHHH
T ss_pred HHhCCCCEEEeCC-cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCC-CCccHHHHHHHHHHH
Confidence 9999999999997 67899999999999999999999999999999999999999999997766 578988877777666
Q ss_pred hcCCCcc
Q 012041 430 LASGQIK 436 (472)
Q Consensus 430 ~~~~~i~ 436 (472)
...+++.
T Consensus 317 aa~~~~~ 323 (385)
T 3i6e_A 317 AATPEIT 323 (385)
T ss_dssp HTCTTEE
T ss_pred HhCCCCc
Confidence 6555543
No 38
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=100.00 E-value=4.2e-47 Score=391.07 Aligned_cols=300 Identities=15% Similarity=0.157 Sum_probs=225.5
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
+|||++|+++.+. .+.+ +..|+|+|+|| |+ +||||+.. .+++..++..
T Consensus 19 ~MkIt~Ie~~~~~~Pl~~p~~~s~g~~~~~~~vlV~i~td~G~----------~G~Ge~~~---------~~~~~~~~~~ 79 (388)
T 4h83_A 19 GLTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGI----------IGEAYTGD---------EHETMFDIDR 79 (388)
T ss_dssp -CBEEEEEEEEEEEEC----------CCEEEEEEEEEEETTSC----------EEEEEECC---------CCTTHHHHHH
T ss_pred CCEEEEEEEEEEEeeccCCEECCCEEEEEEEEEEEEEEECCCC----------EEEEEecC---------CcccHHHHHH
Confidence 4999999998883 1222 35699999999 99 89999742 2344566777
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCC-CCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGT-PNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~-~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
.|++.|+|.|+|+||.+++++|+.|++.... .+.+....+|++||||||||+.||.+|+|||+||| |. ++++|++
T Consensus 80 ~i~~~lap~LiG~dp~~ie~l~~~~~~~~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---g~-~~~~~~y 155 (388)
T 4h83_A 80 IIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWG---GY-RNELPMI 155 (388)
T ss_dssp HHHHTTHHHHTTSBTTCHHHHHHHHGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CS-CSEEEEE
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcC---CC-cCceEEE
Confidence 7889999999999999999999999864322 12223345799999999999999999999999999 96 4577773
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
.++ +.+. . +. .+..+++.+...+||+++| .|+|. .+.+.+.++++.+|
T Consensus 156 ~~~----~~~~-~--~~---------~~~~~~~~~~~~~G~~~~K----ikvg~------------~~~~~d~~~v~avR 203 (388)
T 4h83_A 156 AIG----GYYG-E--PL---------GSIADEMHNYQELGLAGVK----FKVGG------------LSAAEDAARITAAR 203 (388)
T ss_dssp EEE----CCTT-C--TT---------CSHHHHHHHHHHHTBSEEE----EECSS------------SCHHHHHHHHHHHH
T ss_pred eec----cccC-C--CH---------HHHHHHHHHHHHcCCceEe----ecCCC------------CCHHHHHHHHHHHH
Confidence 322 1110 0 00 1234455556666776664 55431 11222344455555
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCc-CCHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQ-DDWSSWA 347 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~-~D~~~~~ 347 (472)
+++ | +++.|++|+ |++||.++|+++ .+.+++|++.|||||+++ +|+++++
T Consensus 204 ~~~---G--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~~~iEeP~~~~~d~~~~~ 254 (388)
T 4h83_A 204 EAA---G--DDFIICIDA-----------------------NQGYKPAVAVDL-SRRIADLNIRWFEEPVEWHNDKRSMR 254 (388)
T ss_dssp HHH---C--SSSEEEEEC-----------------------TTCBCHHHHHHH-HHHTTTSCCCCEESCBCSTTHHHHHH
T ss_pred Hhc---C--CCeEEEEec-----------------------CcCCCHHHHHHH-HHHhhhcCcceeecCcccccchHHHH
Confidence 444 3 289999999 466889999988 556899999999999986 6799999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|+.| .+|. ++ +..+|++
T Consensus 255 ~l~~~~~ipIa~dE~-~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~gv~v-~~h~--~~--~~~~h~~ 328 (388)
T 4h83_A 255 DVRYQGSVPVCAGQT-EFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQM-GHHE--EP--QVSTHLL 328 (388)
T ss_dssp HHHHHSSSCEEECTT-CSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTTCEE-CCCS--CH--HHHHHHH
T ss_pred HHHhhcCCCccCCcc-ccChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHCCCEE-EecC--HH--HHHHHHH
Confidence 999999999999997 6789999999999999999999999999999999999999999985 4553 33 3456777
Q ss_pred HhhcC
Q 012041 428 VGLAS 432 (472)
Q Consensus 428 va~~~ 432 (472)
.++..
T Consensus 329 aa~~~ 333 (388)
T 4h83_A 329 ASQPH 333 (388)
T ss_dssp HHSTT
T ss_pred HHhhc
Confidence 66543
No 39
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=100.00 E-value=4.8e-47 Score=393.78 Aligned_cols=320 Identities=18% Similarity=0.210 Sum_probs=236.2
Q ss_pred ceEEEEEEEEEec--CCCCC----eEEEEEEEC-CeeeeeccCCCcccccee-eeeccCCCCccCcchHHHHHHHHHHhh
Q 012041 44 AKVKSVKARQIID--SRGNP----TVEVDLITD-DLFRSAVPSGASTGIYEA-LELRDGDKSVYGGKGVLNAVKNINDIL 115 (472)
Q Consensus 44 m~I~~V~~~~v~~--~~~~~----~v~V~I~td-G~~~~~~p~~~~~G~gEa-~~~~d~~~~~~~g~~~~~a~~~i~~~l 115 (472)
|||++|+++.+.. ..+.| +|+|+|+|| |+ +||||+ .. + +.+.+++...|++ +
T Consensus 3 MkI~~i~~~~~~~pl~~~~~~~~~~v~V~v~td~G~----------~G~Ge~~~~--------~-g~~~~~~~~~i~~-l 62 (410)
T 2gl5_A 3 LKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGL----------SGIGEVGLA--------Y-GAGAKAGVGIIRD-L 62 (410)
T ss_dssp CCEEEEEEEECCGGGTCGGGTTCCCEEEEEEETTSC----------EEEEEESCS--------S-STTHHHHHHHHHH-H
T ss_pred ceEEEEEEEEecccccccCcccccceEEEEEeCCCC----------EEEEeecCc--------C-CCChHHHHHHHHH-H
Confidence 8999999999854 11112 579999999 99 899997 42 1 2234455666776 9
Q ss_pred hhcccCCCCCCHHHHHHHHHHhcC-CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEe-e
Q 012041 116 GPKLVGVDIRDQAEVDAIMLEIDG-TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNV-I 193 (472)
Q Consensus 116 ap~LiG~d~~d~e~i~~~l~~~~~-~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~-~ 193 (472)
+|.|+|+||.+++++|+.|.+... +.++++++.+|++||||||||++||.+|+|||+||| |..++++|+ |++ +
T Consensus 63 ~p~liG~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~--y~~~i 137 (410)
T 2gl5_A 63 APLIVGEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLG---GKTNEKLRT--YASQL 137 (410)
T ss_dssp GGGTTTSCTTCHHHHHHHHHHSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---SCSCSSEEE--EEECG
T ss_pred HHHhCCCChHHHHHHHHHHHHhcccccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCccCceeE--eEecc
Confidence 999999999999999999986421 113344557899999999999999999999999999 976666665 766 5
Q ss_pred c-C-CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc------CCCc----ccCCCCCCCCC--CCCC
Q 012041 194 N-G-GSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKY------GQDA----CNVGDEGGFAP--NVQD 259 (472)
Q Consensus 194 ~-g-g~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~------G~~~----~~~~~~G~~~~--~~~~ 259 (472)
+ | +.|+++.++.+ +.++++.+...+||+.+| .|. |... .+. ..|++.+ +++.
T Consensus 138 ~~g~~~~~~~~~~~~---------~~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~~~~~~~~~-~~GG~~~~~~~~~ 203 (410)
T 2gl5_A 138 QFGWGDKNHILVTPE---------EYAEAARAALDDGYDAIK----VDPLEIDRNGDDCVFQNRNR-NYSGLLLADQLKM 203 (410)
T ss_dssp GGCCTTCCSCCCSHH---------HHHHHHHHHHHTTCSEEE----ECSSSBCTTSCBTTTSSCCG-GGGSCCCHHHHHH
T ss_pred cCCccccccccCCHH---------HHHHHHHHHHHcCCCEEE----EeccccCCcccccccccccc-cccCccchhHHHH
Confidence 5 3 44443332222 234566666667787665 342 2100 000 1233322 1222
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCC
Q 012041 260 NREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFD 339 (472)
Q Consensus 260 ~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~ 339 (472)
+.+.++.+|+++ | .++.|++|+| ++|+.+++++++ +.+++|++.|||||++
T Consensus 204 ~~e~v~avR~a~---G--~d~~l~vDan-----------------------~~~~~~~ai~~~-~~l~~~~i~~iE~P~~ 254 (410)
T 2gl5_A 204 GEARIAAMREAM---G--DDADIIVEIH-----------------------SLLGTNSAIQFA-KAIEKYRIFLYEEPIH 254 (410)
T ss_dssp HHHHHHHHHHHH---C--SSSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCEEEEECSSC
T ss_pred HHHHHHHHHHhc---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCeEECCCC
Confidence 344455555444 3 2899999993 557889999885 5589999999999999
Q ss_pred cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 012041 340 QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETE 419 (472)
Q Consensus 340 ~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~ 419 (472)
++|++++++|++++++||++||+ ++++++++++++.+++|++++|++++||||++++++++|+++|+++++ |.+ ++.
T Consensus 255 ~~~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~-h~~-~s~ 331 (410)
T 2gl5_A 255 PLNSDNMQKVSRSTTIPIATGER-SYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQV-HVC-GGP 331 (410)
T ss_dssp SSCHHHHHHHHHHCSSCEEECTT-CCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECC-CCC-SSH
T ss_pred hhhHHHHHHHHhhCCCCEEecCC-cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEee-cCC-CCH
Confidence 99999999999999999999997 567899999999999999999999999999999999999999999876 544 587
Q ss_pred hhHHHHHHHhhcCCC
Q 012041 420 DNFIADLSVGLASGQ 434 (472)
Q Consensus 420 ~s~~a~lAva~~~~~ 434 (472)
++.++.++++...+.
T Consensus 332 i~~aa~~hlaaa~~~ 346 (410)
T 2gl5_A 332 VSTVAALHMETAIPN 346 (410)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCc
Confidence 776655555544443
No 40
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=100.00 E-value=2.9e-47 Score=393.69 Aligned_cols=305 Identities=16% Similarity=0.182 Sum_probs=228.3
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGV 122 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~ 122 (472)
|||++|+++.+ ..++++|+|+|| |+ +||||+.. ++ ..+++...++ .++|.|+|+
T Consensus 2 MkIt~i~~~~~----~~~~~~V~v~td~G~----------~G~GE~~~--------~g--~~~~~~~~i~-~l~p~liG~ 56 (405)
T 3rr1_A 2 VKITRLTTYRL----PPRWMFLKVETDEGV----------TGWGEPVI--------EG--RARTVEAAVH-ELSDYLIGQ 56 (405)
T ss_dssp CCEEEEEEEEE----TTTEEEEEEEETTSC----------EEEECCCC--------TT--CHHHHHHHHH-HHGGGTTTS
T ss_pred CeEEEEEEEEE----CCCEEEEEEEECCCC----------EEEEeCCC--------CC--CHHHHHHHHH-HHHHHHCCC
Confidence 89999999888 246799999999 99 89999753 11 1234444454 499999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCc
Q 012041 123 DIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNN 202 (472)
Q Consensus 123 d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~ 202 (472)
||.+++++|+.|++.. .++++.+..+|++||||||||+.||.+|+|||+||| |+.++++|+ |.++++.
T Consensus 57 dp~~~e~~~~~l~~~~-~~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~------ 124 (405)
T 3rr1_A 57 DPSRINDLWQTMYRAG-FYRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLG---GLVRDKMRT--YSWVGGD------ 124 (405)
T ss_dssp CTTCHHHHHHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSCEEE--EEECCCS------
T ss_pred CcccHHHHHHHHHHhh-cccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---ccccCceee--eEeCCCC------
Confidence 9999999999998632 222233445799999999999999999999999999 987778887 5543211
Q ss_pred ccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEE
Q 012041 203 LAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINI 282 (472)
Q Consensus 203 l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l 282 (472)
+. ++..+++.+...+||+++| . .|... ..+.......+++++.+++..+..| +++.|
T Consensus 125 -~~---------e~~~~~a~~~~~~G~~~iK----l-~G~~~------~~~~~~~~~~~~d~e~v~avR~avG--~d~~L 181 (405)
T 3rr1_A 125 -RP---------ADVIAGMKALQAGGFDHFK----L-NGCEE------MGIIDTSRAVDAAVARVAEIRSAFG--NTVEF 181 (405)
T ss_dssp -SH---------HHHHHHHHHHHHTTCCEEE----E-ESCCS------SSCBCSHHHHHHHHHHHHHHHHTTG--GGSEE
T ss_pred -CH---------HHHHHHHHHHHHcCCCEEE----E-ecCCc------ccccccchhHHHHHHHHHHHHHHhC--CCceE
Confidence 11 2234555555566776665 3 33210 0011100112334454444333333 28999
Q ss_pred EEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCc
Q 012041 283 GMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDL 362 (472)
Q Consensus 283 ~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~ 362 (472)
++|+ |++||.++++++ .+.++++++.|||||++++|++++++|++++++||++||+
T Consensus 182 ~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~ 237 (405)
T 3rr1_A 182 GLDF-----------------------HGRVSAPMAKVL-IKELEPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGER 237 (405)
T ss_dssp EEEC-----------------------CSCBCHHHHHHH-HHHHGGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTT
T ss_pred EEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCC
Confidence 9999 356789999987 5668999999999999999999999999999999999997
Q ss_pred cccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 363 LVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 363 ~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
++++++++++++.+++|++|||++++||||++++++++|+++|+++++ |. .++.++.+++++++...+.+
T Consensus 238 -i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~-h~-~~s~i~~aa~~hlaaa~pn~ 307 (405)
T 3rr1_A 238 -MFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAP-HC-PLGPIALAACLHVDFVSWNA 307 (405)
T ss_dssp -CCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECC-BC-CSCHHHHHHHHHHHHHCTTB
T ss_pred -cCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEe-CC-CCcHHHHHHHHHHHHhCCCc
Confidence 678999999999999999999999999999999999999999999864 53 36877766666665544433
No 41
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.9e-47 Score=393.76 Aligned_cols=304 Identities=17% Similarity=0.188 Sum_probs=240.7
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. .+.+ +++++|+|+|| |+ +||||+.++.. |+|.++++.++...
T Consensus 20 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~----------~G~GE~~~~~~---~~~~~e~~~~~~~~ 86 (386)
T 1wue_A 20 MNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGN----------QGFGELVAFEQ---PDYVQETLVTERFI 86 (386)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEECCCSS---TTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEecccCCCccccceEEecCcEEEEEEEECCCC----------EEEEEeecCCC---CcccCCcHHHHHHH
Confidence 999999998773 2222 35799999999 98 89999865432 36888999888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+|+.+++.+|+.|..+.+ +.+|++|||+||||+.||.+|+|||+||| | .++++|++.
T Consensus 87 i~~~l~p~l~G~d~~~~~~l~~~l~~~~g-------~~~A~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~~~~- 154 (386)
T 1wue_A 87 IQQHLIPLLLTEAIEQPQEVSTIFEEVKG-------HWMGKAALETAIWDLYAKRQQKSLTEFFG---P-TRRKIPVGI- 154 (386)
T ss_dssp HHHTHHHHHTTSCCCSTHHHHHHGGGSCS-------CHHHHHHHHHHHHHHHHHHTTSBGGGGSS---S-CCSEEECCE-
T ss_pred HHHHHHHHHcCCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCCeeEeeE-
Confidence 98889999999999999999998865321 25899999999999999999999999999 8 466888754
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
+++.+ .+. .+.++++.+...+||+++| .|+| + +.+.+.++++|++
T Consensus 155 -~~g~~------~~~---------~~~~~~a~~~~~~G~~~~K----iKvg-------------~--~~d~~~v~avr~a 199 (386)
T 1wue_A 155 -SLGIQ------EDL---------PQLLKQVQLAVEKGYQRVK----LKIR-------------P--GYDVEPVALIRQH 199 (386)
T ss_dssp -EECCC------SCH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHHHHHHHHHH
T ss_pred -EecCC------CCH---------HHHHHHHHHHHHhhhheEE----EeeC-------------c--HHHHHHHHHHHHh
Confidence 33211 011 2234566666667777665 4533 1 1235666666555
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ +++.|++|+| +.|+.+++ ++ .+.+++|++.|||||++++|+++|++|+
T Consensus 200 ~------~~~~l~vDaN-----------------------~~~~~~~a-~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~ 248 (386)
T 1wue_A 200 F------PNLPLMVDAN-----------------------SAYTLADL-PQ-LQRLDHYQLAMIEQPFAADDFLDHAQLQ 248 (386)
T ss_dssp C------TTSCEEEECT-----------------------TCCCGGGH-HH-HHGGGGSCCSCEECCSCTTCSHHHHHHH
T ss_pred C------CCCeEEEeCC-----------------------CCCCHHHH-HH-HHHHHhCCCeEEeCCCCcccHHHHHHHH
Confidence 3 4789999993 45677788 67 5779999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|+++|++| +.|+.++.+++++++.
T Consensus 249 ~~~~ipIa~dE~-~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~~aa~~hlaa 326 (386)
T 1wue_A 249 RELKTRICLDEN-IRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLGG-MFESGVGRALNLQFAS 326 (386)
T ss_dssp TTCSSCEEECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHHHHHHHHHHT
T ss_pred HhcCCCEEeCCc-cCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEECC-CcccHHHHHHHHHHHh
Confidence 999999999997 56799999999999999999999999999999999999999999998877 5689888777777764
Q ss_pred cCCCcccCCC
Q 012041 431 ASGQIKTGAP 440 (472)
Q Consensus 431 ~~~~i~~g~~ 440 (472)
...+..++++
T Consensus 327 ~~~~~~~~~~ 336 (386)
T 1wue_A 327 QPTFSFPGDI 336 (386)
T ss_dssp STTCCSCCSC
T ss_pred CCCCCccccc
Confidence 3333333443
No 42
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=100.00 E-value=1.8e-47 Score=392.63 Aligned_cols=302 Identities=16% Similarity=0.182 Sum_probs=234.7
Q ss_pred ceEEEEEEEEEe--------cCC----CCC-eEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 44 AKVKSVKARQII--------DSR----GNP-TVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~----~~~-~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
|||++|+++.+. ++. .+. .++|+|+|| |+ +||||+.++. .|. ++.+++.+
T Consensus 6 ~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~-----~~~-e~~~~~~~ 69 (377)
T 3my9_A 6 SVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGI----------VGWGEAAPWE-----VFT-GTPEAAFS 69 (377)
T ss_dssp CBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSC----------EEEEEECCC-----------CHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeeccceEEEeeeeEEEEEEEECCCC----------EEEEecccCC-----CcC-CCHHHHHH
Confidence 999999998884 122 245 799999999 99 8999986532 132 56777777
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.|++.++|.|+|+||.+++++|+.|++... -..+|++|||+||||+.||.+|+|||+||| |..++++|+.
T Consensus 70 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~------~~~~A~said~AlwDl~gk~~g~Pl~~LLG---g~~r~~v~~~- 139 (377)
T 3my9_A 70 ALDIYLRPLILGAPIKRVRELMARMDKMLV------GHGEAKAAVEMALLDILGKATGLSVADLLG---GRVRDRIPLS- 139 (377)
T ss_dssp HHHTTTHHHHTTCBTTCHHHHHHHHHHHSC------SCHHHHHHHHHHHHHHHHHHHTCBTTGGGT---CCSCSEEEBC-
T ss_pred HHHHHHHHHhCCCCcCCHHHHHHHHHHHhc------CchhHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCeEEEE-
Confidence 888789999999999999999999986321 125799999999999999999999999999 9877788873
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
.+++.+ +. .+.++++.+...+||+++| .|+|. .+++.+.+.++++|+
T Consensus 140 -~t~~~~-------~~---------~~~~~~a~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~v~avR~ 186 (377)
T 3my9_A 140 -FSIADP-------DF---------DADLERMRAMVPAGHTVFK----MKTGV------------KPHAEELRILETMRG 186 (377)
T ss_dssp -EEECCS-------SH---------HHHHHHHHHHTTTTCCEEE----EECSS------------SCHHHHHHHHHHHHH
T ss_pred -EecCCC-------CH---------HHHHHHHHHHHHcCCCEEE----EccCC------------CcHHHHHHHHHHHHH
Confidence 332211 11 2234555555556776664 56542 112234555555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
++ | .++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|
T Consensus 187 ~~---g--~~~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l 237 (377)
T 3my9_A 187 EF---G--ERIDLRLDF-----------------------NQALTPFGAMKI-LRDVDAFRPTFIEQPVPRRHLDAMAGF 237 (377)
T ss_dssp HH---G--GGSEEEEEC-----------------------TTCCCTTTHHHH-HHHHHTTCCSCEECCSCTTCHHHHHHH
T ss_pred Hh---C--CCCeEEEeC-----------------------CCCcCHHHHHHH-HHHHhhcCCCEEECCCCccCHHHHHHH
Confidence 55 3 279999999 355777888887 566899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.++.++++
T Consensus 238 ~~~~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~es~i~~aa~~hla 315 (377)
T 3my9_A 238 AAALDTPILADES-CFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGT-LWEGGIALAAGTQLI 315 (377)
T ss_dssp HHHCSSCEEESTT-CSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCE-ECCSHHHHHHHHHHH
T ss_pred HHhCCCCEEECCc-cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCC-CCCcHHHHHHHHHHH
Confidence 9999999999997 67899999999999999999999999999999999999999999997666 578888877666666
Q ss_pred hcCCCc
Q 012041 430 LASGQI 435 (472)
Q Consensus 430 ~~~~~i 435 (472)
...+++
T Consensus 316 aa~~~~ 321 (377)
T 3my9_A 316 AATPGI 321 (377)
T ss_dssp HTCTTB
T ss_pred HhCCCC
Confidence 555544
No 43
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=100.00 E-value=9.2e-47 Score=386.88 Aligned_cols=303 Identities=17% Similarity=0.175 Sum_probs=231.1
Q ss_pred ceEEEEEEEEEecC-------CCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHh-
Q 012041 44 AKVKSVKARQIIDS-------RGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDI- 114 (472)
Q Consensus 44 m~I~~V~~~~v~~~-------~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~- 114 (472)
|||++|+++.+-.. .....++|+|+|| |+ +||||.. ++..++...|++.
T Consensus 3 MkI~~i~~~~~~~P~~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~------------~~~~~~~~~i~~~~ 60 (374)
T 3sjn_A 3 LKITDIEVLHLRVPAMDADCEWGEDAVIVKVHTDKGI----------VGVGEAD------------SSPLVVQACIEAPQ 60 (374)
T ss_dssp CBEEEEEEEEEESSCTTSCCCTTSEEEEEEEEETTSC----------EEEEEES------------SCHHHHHHHHHCCC
T ss_pred cEEEEEEEEEEeccCcCCcCcccceEEEEEEEECCCC----------EEEEcCC------------CChHHHHHHHHhhh
Confidence 89999999998422 1112389999999 99 8999931 2244556667666
Q ss_pred -------hhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeee
Q 012041 115 -------LGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPV 187 (472)
Q Consensus 115 -------lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~ 187 (472)
++|.|+|+||.+++++|+.|++.......+++..+|++||||||||+.||.+|+|||+||| |..++++|+
T Consensus 61 ~~~~~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~~v~~ 137 (374)
T 3sjn_A 61 TNFYCNGLKRLLIGENALEIERLWNKMYWGSNYMGRRGAGIHAISAIDIALWDIAGQFYGVPVHTLLG---GKYRDKIRC 137 (374)
T ss_dssp SBTTBCCHHHHHTTSBTTCHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEE
T ss_pred ccchHhHHHHHHcCCCcccHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCcCCceeE
Confidence 9999999999999999999986322111234456899999999999999999999999999 977778887
Q ss_pred eEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHH
Q 012041 188 PAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLL 267 (472)
Q Consensus 188 ~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v 267 (472)
|..+ + . .+ ..++..+++.+...+||+++| .|+|.. | .+.+.+.+.++++
T Consensus 138 --y~~~--~--~---~~--------~~e~~~~~a~~~~~~Gf~~iK----lk~g~~-------g---~~~~~d~~~v~av 186 (374)
T 3sjn_A 138 --YGTF--I--P---AD--------KPEDNVAIVQGLKDQGFSSIK----FGGGVM-------G---DDPDTDYAIVKAV 186 (374)
T ss_dssp --EEEE--C--C---CS--------SGGGGHHHHHHHHTTTCSEEE----EECTTT-------T---SCHHHHHHHHHHH
T ss_pred --Eecc--C--C---CC--------CHHHHHHHHHHHHHcCCCEEE----eccCCC-------C---CCHHHHHHHHHHH
Confidence 4211 1 0 00 012345566666666787665 565521 1 1123334555555
Q ss_pred HHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccC-HHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHH
Q 012041 268 TDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLS-AQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSW 346 (472)
Q Consensus 268 ~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s-~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~ 346 (472)
|+++ | .++.|++|+ |++|+ .++++++ .+.++++++.|||||++++|++++
T Consensus 187 R~a~---g--~~~~l~vDa-----------------------n~~~~d~~~A~~~-~~~l~~~~i~~iEqP~~~~~~~~~ 237 (374)
T 3sjn_A 187 REAA---G--PEMEVQIDL-----------------------ASKWHTCGHSAMM-AKRLEEFNLNWIEEPVLADSLISY 237 (374)
T ss_dssp HHHH---C--SSSEEEEEC-----------------------TTTTCSHHHHHHH-HHHSGGGCCSEEECSSCTTCHHHH
T ss_pred HHHh---C--CCCeEEEEC-----------------------CCCCCCHHHHHHH-HHHhhhcCceEEECCCCcccHHHH
Confidence 5554 3 289999999 46688 9999987 566899999999999999999999
Q ss_pred HHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHH
Q 012041 347 ASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADL 426 (472)
Q Consensus 347 ~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~l 426 (472)
++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++ |.+ ++.++.++++
T Consensus 238 ~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~~-~~~i~~aa~~ 314 (374)
T 3sjn_A 238 EKLSRQVSQKIAGGES-LTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIP-HGF-STGILLHASV 314 (374)
T ss_dssp HHHHHHCSSEEEECTT-CCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECC-BCC-SCHHHHHHHH
T ss_pred HHHHhhCCCCEEeCCC-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cCC-CcHHHHHHHH
Confidence 9999999999999997 577999999999999999999999999999999999999999999865 534 7887776666
Q ss_pred HHhhcCCC
Q 012041 427 SVGLASGQ 434 (472)
Q Consensus 427 Ava~~~~~ 434 (472)
+++...+.
T Consensus 315 hlaaa~~~ 322 (374)
T 3sjn_A 315 HFLAACEQ 322 (374)
T ss_dssp HHHHTCTT
T ss_pred HHHHhCCC
Confidence 66554443
No 44
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=100.00 E-value=1.5e-46 Score=388.18 Aligned_cols=311 Identities=15% Similarity=0.107 Sum_probs=245.5
Q ss_pred CceEEEEEEEEEec--------CCC----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 43 SAKVKSVKARQIID--------SRG----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 43 ~m~I~~V~~~~v~~--------~~~----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
.|||++|+++.+.. +.+ +..++|+|+|+|+ +||||+.++.. |+|.+++.+++...
T Consensus 6 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~lV~v~t~G~----------~G~GE~~~~~~---p~~~~et~~~~~~~ 72 (400)
T 3mwc_A 6 SARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIREGDL----------FGYGESAPFEE---PFYLGETLETTKVI 72 (400)
T ss_dssp CCCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEEETTE----------EEEEEECCBSS---TTSTTCBHHHHHHH
T ss_pred CcEEEEEEEEEEeccccCceEccCceEeeeeEEEEEEEECCe----------EEEEecccCCC---CccccCcHHHHHHH
Confidence 59999999988841 222 3569999999988 89999976432 46888999888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcC-----------
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSG----------- 179 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G----------- 179 (472)
|++.++|.|+|+||.+++++|+.|... .++ +.+|++|||+||||+.||.+|+|||+||| |
T Consensus 73 i~~~l~p~liG~d~~~~e~~~~~l~~~---~~g---~~~A~said~ALwDl~gk~~g~Pl~~LLG---G~~~~~~~~~~~ 143 (400)
T 3mwc_A 73 LKNHLLPMILGKEPLSIEEFNHLIKNG---IRG---NHFARCGVENAYWDLIAKKNKISLKAMIE---KKMKNLGVKQEY 143 (400)
T ss_dssp HHHTHHHHHTTCCCSSHHHHHHHHHHS---CCS---CHHHHHHHHHHHHHHHHHHTTCBHHHHHH---HHHHHTTCCGGG
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHH---hcC---CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---Cccccccccccc
Confidence 988999999999999999999999862 111 24699999999999999999999999999 7
Q ss_pred -CCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCC
Q 012041 180 -TKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQ 258 (472)
Q Consensus 180 -~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~ 258 (472)
..++++|+ |.+++-. ... .+++..+++.+...+||+++| .|+| + +
T Consensus 144 ~~~r~~v~~--~~s~g~~----~~~---------~~e~~~~~a~~~~~~G~~~iK----lKv~-------------~--~ 189 (400)
T 3mwc_A 144 LASNNYIES--GAALGIP----EDG---------RIETLIHQVEESLQEGYRRIK----IKIK-------------P--G 189 (400)
T ss_dssp GCBCSEEEB--CEEECCC----TTC---------CHHHHHHHHHHHHHHTCSCEE----EECB-------------T--T
T ss_pred ccCCCeEEe--eEEeccC----CCC---------CHHHHHHHHHHHHHcCCCEEE----EEeC-------------c--c
Confidence 66677877 4333211 000 012334556666666777665 4432 1 2
Q ss_pred CcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCC
Q 012041 259 DNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPF 338 (472)
Q Consensus 259 ~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~ 338 (472)
.+.+.+++||+++ | +++.|++|+ |++|+.++ +++ .+.++++++.|||||+
T Consensus 190 ~d~~~v~avR~a~---G--~~~~L~vDa-----------------------N~~w~~~~-~~~-~~~l~~~~i~~iEqP~ 239 (400)
T 3mwc_A 190 WDVEPLQETRRAV---G--DHFPLWTDA-----------------------NSSFELDQ-WET-FKAMDAAKCLFHEQPL 239 (400)
T ss_dssp BSHHHHHHHHHHH---C--TTSCEEEEC-----------------------TTCCCGGG-HHH-HHHHGGGCCSCEESCS
T ss_pred hHHHHHHHHHHhc---C--CCCEEEEeC-----------------------CCCCCHHH-HHH-HHHHHhcCCCEEeCCC
Confidence 3477777777776 2 279999999 35567778 777 5668999999999999
Q ss_pred CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 012041 339 DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGET 418 (472)
Q Consensus 339 ~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et 418 (472)
+++|++++++|++++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.|+
T Consensus 240 ~~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es 317 (400)
T 3mwc_A 240 HYEALLDLKELGERIETPICLDES-LISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT-MPES 317 (400)
T ss_dssp CTTCHHHHHHHHHHSSSCEEESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-SCCC
T ss_pred ChhhHHHHHHHHhhCCCCEEEeCC-cCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC-CCCC
Confidence 999999999999999999999997 57799999999999999999999999999999999999999999997766 5899
Q ss_pred hhhHHHHHHHhhcCCCcccCCCC
Q 012041 419 EDNFIADLSVGLASGQIKTGAPC 441 (472)
Q Consensus 419 ~~s~~a~lAva~~~~~i~~g~~~ 441 (472)
.++.++.++++..+.+..++++.
T Consensus 318 ~i~~aa~~hlaa~~~~~~~~d~~ 340 (400)
T 3mwc_A 318 GLGARFLISLASFRGFVFPADVA 340 (400)
T ss_dssp HHHHHHHHHHTTBTTBCSCBCCC
T ss_pred HHHHHHHHHHHcCCCCcceeccC
Confidence 98888888887644444444543
No 45
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=100.00 E-value=8.2e-47 Score=386.45 Aligned_cols=306 Identities=17% Similarity=0.226 Sum_probs=242.8
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. ++.+ +++++|+|+|| |+ +||||+.++ ++|.+++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-----~~~~~~~~~~~~~~ 65 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGA----------VGWGEAPPT-----LVITGDSMDSIESA 65 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEECCC-----TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecCeeEEEeeEEEEEEEECCCC----------EEEEEecCC-----CCcCCCCHHHHHHH
Confidence 899999998773 2322 35799999999 98 899998653 25778888888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+|+.+++.+|+.|.+... -..+|++|||+||||+.||.+|+|||+||| | .++++|++.
T Consensus 66 l~~~l~~~l~g~~~~~~~~~~~~l~~~~~------~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~~~~- 134 (366)
T 1tkk_A 66 IHHVLKPALLGKSLAGYEAILHDIQHLLT------GNMSAKAAVEMALYDGWAQMCGLPLYQMLG---G-YRDTLETDY- 134 (366)
T ss_dssp HHHTHHHHHTTCBGGGHHHHHHHHHHSSS------SCHHHHHHHHHHHHHHHHHHTTSBHHHHHT---C-CCSEEEBCE-
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHHHcCCCHHHHhC---C-CCCceeeeE-
Confidence 98889999999999999999999976211 135899999999999999999999999999 9 466788743
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
+++++ +. .+..+++.+...+||+.+| .|.|. .+.+.+.+.++++|++
T Consensus 135 -~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~d~~~v~avr~a 181 (366)
T 1tkk_A 135 -TVSVN-------SP---------EEMAADAENYLKQGFQTLK----IKVGK------------DDIATDIARIQEIRKR 181 (366)
T ss_dssp -EECSC-------CH---------HHHHHHHHHHHHHTCCEEE----EECCS------------SCHHHHHHHHHHHHHH
T ss_pred -EecCC-------CH---------HHHHHHHHHHHHcCCCeEE----EEeCC------------CCHHHHHHHHHHHHHH
Confidence 33222 11 1234556666667776665 45441 1223334555555555
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhh--CCeeEEeCCCCcCCHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRD--FPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~--~~l~~iEdP~~~~D~~~~~~ 348 (472)
+ | +++.|++|+ |++||.+++++++ +.+++ |++.|||||++++|++++++
T Consensus 182 ~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~~~i~~iEqP~~~~d~~~~~~ 232 (366)
T 1tkk_A 182 V---G--SAVKLRLDA-----------------------NQGWRPKEAVTAI-RKMEDAGLGIELVEQPVHKDDLAGLKK 232 (366)
T ss_dssp H---C--SSSEEEEEC-----------------------TTCSCHHHHHHHH-HHHHHTTCCEEEEECCSCTTCHHHHHH
T ss_pred h---C--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHhhcCCCceEEECCCCcccHHHHHH
Confidence 4 3 279999999 3567889999885 56899 99999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|+++||++++||+|++++++++|+++|+++|++| +.|+.++.++++++
T Consensus 233 l~~~~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~~a~~~l 310 (366)
T 1tkk_A 233 VTDATDTPIMADES-VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGS-MIETKLGITAAAHF 310 (366)
T ss_dssp HHHHCSSCEEECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC-SSCCHHHHHHHHHH
T ss_pred HHhhCCCCEEEcCC-CCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecC-ccccHHHHHHHHHH
Confidence 99999999999997 68899999999999999999999999999999999999999999998877 47999888777777
Q ss_pred hhcCCCcccCC
Q 012041 429 GLASGQIKTGA 439 (472)
Q Consensus 429 a~~~~~i~~g~ 439 (472)
+...+.+.+.+
T Consensus 311 aaa~~~~~~~e 321 (366)
T 1tkk_A 311 AASKRNITRFD 321 (366)
T ss_dssp HHHCTTEEEEC
T ss_pred HHcCCCCceec
Confidence 76555544433
No 46
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=100.00 E-value=8.5e-47 Score=389.54 Aligned_cols=312 Identities=17% Similarity=0.137 Sum_probs=225.8
Q ss_pred CceEEEEEEEEEecC---CCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHH------
Q 012041 43 SAKVKSVKARQIIDS---RGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNIN------ 112 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~---~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~------ 112 (472)
.|||++|+++.+... ..+++++|+|+|| |+ +||||+... .......++
T Consensus 4 ~mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~----------~G~GE~~~~------------~~~~~~~~~~~~~~~ 61 (394)
T 3mqt_A 4 GANIVSVEFIPVNVAATNWSENTVIVKVTDENGV----------YGLGEADGP------------PECMKAFSEIENEHK 61 (394)
T ss_dssp -CCEEEEEEEEEECC-----CEEEEEEEEETTSC----------EEEEEECSC------------HHHHHHHHTCCCCBT
T ss_pred CCeEeEEEEEEEecCCCCCCccEEEEEEEECCCC----------EEEEEECCc------------HHHHHHHHhcccchh
Confidence 499999999988432 2356799999999 99 899997421 111222222
Q ss_pred --HhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 113 --DILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 113 --~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
+.++|.|+|+||.+++++|+.|++.......++...+|++||||||||++||.+|+|||+||| |..++++|+ |
T Consensus 62 ~~~~l~p~liG~dp~~~e~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y 136 (394)
T 3mqt_A 62 WLNNIKEAVIGRDPLEFRANYNRMYDTTKWIGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMG---GAQKAQLTP--Y 136 (394)
T ss_dssp TBCCGGGGTTTSCTTCHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSSSBCC--E
T ss_pred hHHHHHHHhCCCChhHHHHHHHHHHHhhhhhCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCCCCeEEE--E
Confidence 249999999999999999999986422111122335799999999999999999999999999 987778876 5
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHh-hcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKE-KYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~-k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
.+++.... ...+.++. + .+..+++.+...+||+++| . |+|.. ..+.+.+.+.++++|+
T Consensus 137 ~s~~~~~~--~~~~~~~~-i----~~~~~~a~~~~~~G~~~~K----~~k~g~~----------~~~~~~d~~~v~avR~ 195 (394)
T 3mqt_A 137 FTLYPSVA--ADATLSEI-V----EAYKPLIAKAKERGAKAVK----VCIIPND----------KVSDKEIVAYLRELRE 195 (394)
T ss_dssp EECCCCCC--TTCCHHHH-H----HHHHHHHHHHHHTTCSEEE----EECCCCT----------TSCHHHHHHHHHHHHH
T ss_pred EEecCCCC--CCcchhhh-H----HHHHHHHHHHHHcCCCEEE----ecccCCC----------ccCHHHHHHHHHHHHH
Confidence 44321000 00000000 0 0122344445555676554 4 54410 0112233445555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCcc-CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVL-SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~-s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
++ | +++.|++|+ |++| +.++++++ .+.++++++.|||||++++|++++++
T Consensus 196 a~---G--~d~~l~vDa-----------------------n~~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~~~~~~~~ 246 (394)
T 3mqt_A 196 VI---G--WDMDMMVDC-----------------------LYRWTDWQKARWT-FRQLEDIDLYFIEACLQHDDLIGHQK 246 (394)
T ss_dssp HH---C--SSSEEEEEC-----------------------TTCCSCHHHHHHH-HHHTGGGCCSEEESCSCTTCHHHHHH
T ss_pred Hh---C--CCCeEEEEC-----------------------CCCCCCHHHHHHH-HHHHhhcCCeEEECCCCcccHHHHHH
Confidence 44 3 289999999 4668 89999988 56689999999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++ +|++ |+.++.++++++
T Consensus 247 l~~~~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~i~~aa~~hl 323 (394)
T 3mqt_A 247 LAAAINTRLCGAEM-STTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLM-PHNW-KTGITAAAARHF 323 (394)
T ss_dssp HHHHSSSEEEECTT-CCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEEC-CCCC-SCHHHHHHHHHH
T ss_pred HHhhCCCCEEeCCC-cCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe-ccCC-CchHHHHHHHHH
Confidence 99999999999997 67799999999999999999999999999999999999999999986 5644 888776555555
Q ss_pred hhcCCC
Q 012041 429 GLASGQ 434 (472)
Q Consensus 429 a~~~~~ 434 (472)
+...+.
T Consensus 324 aaa~p~ 329 (394)
T 3mqt_A 324 GIVCHI 329 (394)
T ss_dssp HHHCTT
T ss_pred HHhCCC
Confidence 543333
No 47
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=100.00 E-value=4.2e-47 Score=390.78 Aligned_cols=304 Identities=15% Similarity=0.164 Sum_probs=240.1
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+.+.+. .+.+ +..++|+|+|| |+ +||||+.++.. |.|.+++..++...
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v~td~G~----------~G~GE~~~~~~---p~~~~e~~~~~~~~ 67 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHIREKQAILVQLVDADGI----------EGWSECVALAE---PTYTEECTDTAWVM 67 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSC----------EEEEEECCCSS---TTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEEEeeeEEEEEEEECCCC----------EEEEecccCCC---CccccccHHHHHHH
Confidence 899999998873 2333 45699999999 99 89999865432 36888888888888
Q ss_pred HHHhhhhccc-------CCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcc
Q 012041 111 INDILGPKLV-------GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKEL 183 (472)
Q Consensus 111 i~~~lap~Li-------G~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~ 183 (472)
|++.++|.|+ |+++.+++++|+.+..+. + ..+|++||||||||+.||.+|+|||+||| |. ++
T Consensus 68 l~~~l~p~l~~~~~~~~G~~~~~~~~~~~~~~~~~-----g--~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~-r~ 136 (388)
T 3qld_A 68 LVHHLVPRFARWLRAASQDQDVDPRTVCEALRDVR-----G--NRMSVAAIEMAVWDWYAARTGQPLVGLLG---GG-RD 136 (388)
T ss_dssp HHHTHHHHHHHHHTSGGGSSCCCGGGGGGGGTTCC-----S--CHHHHHHHHHHHHHHHHHHHTCCHHHHTT---CC-CS
T ss_pred HHHHHHHHHhhhhcccCCCCccCHHHHHHHHHHcc-----C--cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CC
Confidence 9889999999 999999999887774331 1 35799999999999999999999999999 94 56
Q ss_pred eeeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHH
Q 012041 184 VMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREG 263 (472)
Q Consensus 184 ~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~ 263 (472)
++|+ |.+++.+ + ..++..+++.+...+||+++| .|+| + +.+.+.
T Consensus 137 ~v~~--~~~~~~~-------~--------~~e~~~~~~~~~~~~G~~~~K----~Kv~-------------~--~~d~~~ 180 (388)
T 3qld_A 137 RVEV--SATLGMS-------E--------SLDVLIQSVDAAVEQGFRRVK----LKIA-------------P--GRDRAA 180 (388)
T ss_dssp EEEB--EEEECCC-------S--------CHHHHHHHHHHHHHTTCSEEE----EECB-------------T--TBSHHH
T ss_pred eEEE--eEEecCC-------C--------CHHHHHHHHHHHHHhCCCeEE----EEeC-------------c--HHHHHH
Confidence 7876 4443211 0 012334555555566776665 5543 1 224667
Q ss_pred HHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCH
Q 012041 264 LVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDW 343 (472)
Q Consensus 264 l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~ 343 (472)
++++|+++ +++.|++|+ |++|+.++|++ + +.+++|++.|||||++++|+
T Consensus 181 v~avR~~~------~~~~l~vDa-----------------------N~~~~~~~A~~-~-~~l~~~~i~~iEeP~~~~d~ 229 (388)
T 3qld_A 181 IKAVRLRY------PDLAIAADA-----------------------NGSYRPEDAPV-L-RQLDAYDLQFIEQPLPEDDW 229 (388)
T ss_dssp HHHHHHHC------TTSEEEEEC-----------------------TTCCCGGGHHH-H-HHGGGGCCSCEECCSCTTCH
T ss_pred HHHHHHHC------CCCeEEEEC-----------------------CCCCChHHHHH-H-HHHhhCCCcEEECCCCcccH
Confidence 76666655 479999999 35677888874 4 56899999999999999999
Q ss_pred HHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHH
Q 012041 344 SSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFI 423 (472)
Q Consensus 344 ~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~ 423 (472)
++|++|++++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|+++|++| +.|+.++.+
T Consensus 230 ~~~~~l~~~~~ipIa~dE~-~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~a 307 (388)
T 3qld_A 230 FDLAKLQASLRTPVCLDES-VRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGG-MYETGVGRV 307 (388)
T ss_dssp HHHHHHHHHCSSCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHHHH
T ss_pred HHHHHHHHhCCCCEEeCCC-CCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecC-ccchHHHHH
Confidence 9999999999999999997 67899999999999999999999999999999999999999999998777 579999888
Q ss_pred HHHHHhhcCCCcccCCC
Q 012041 424 ADLSVGLASGQIKTGAP 440 (472)
Q Consensus 424 a~lAva~~~~~i~~g~~ 440 (472)
++++++....+..++++
T Consensus 308 a~~~laa~~~~~~~~~~ 324 (388)
T 3qld_A 308 HGLIAAALPLMRYATDL 324 (388)
T ss_dssp HHHHHHTSTTBCSCBSC
T ss_pred HHHHHHcCCCCCccccc
Confidence 88888763333334444
No 48
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=8.9e-47 Score=391.43 Aligned_cols=320 Identities=19% Similarity=0.207 Sum_probs=233.2
Q ss_pred CceEEEEEEEEEecCCCCC-----eEEEEEEEC-CeeeeeccCCCcccccee-eeeccCCCCccCcchHHHHHHHHHHhh
Q 012041 43 SAKVKSVKARQIIDSRGNP-----TVEVDLITD-DLFRSAVPSGASTGIYEA-LELRDGDKSVYGGKGVLNAVKNINDIL 115 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~-----~v~V~I~td-G~~~~~~p~~~~~G~gEa-~~~~d~~~~~~~g~~~~~a~~~i~~~l 115 (472)
.|||++|+++.+..+..+| +|+|+|+|| |+ +||||+ .. . +.+.+++...|++ +
T Consensus 3 ~MkI~~i~~~~~~~p~~~p~~~~~~v~V~v~td~G~----------~G~Ge~a~~-------~--g~~~~~~~~~i~~-l 62 (407)
T 2o56_A 3 LMKITSVDIIDVANDFASATSKWRPVVVKINTDEGI----------SGFGEVGLA-------Y--GVGASAGIGMAKD-L 62 (407)
T ss_dssp CCCEEEEEEEECCCCC-----CCCCEEEEEEETTSC----------EEEEEESCS-------S--SSCHHHHHHHHHH-H
T ss_pred CCEEEEEEEEEeccccCCCcccceeEEEEEEeCCCC----------EEEEeeccC-------C--CCchHHHHHHHHH-H
Confidence 3999999999997654444 679999999 99 899997 32 1 1224455666776 9
Q ss_pred hhcccCCCCCCHHHHHHHHHHhcC-CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEe-e
Q 012041 116 GPKLVGVDIRDQAEVDAIMLEIDG-TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNV-I 193 (472)
Q Consensus 116 ap~LiG~d~~d~e~i~~~l~~~~~-~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~-~ 193 (472)
+|.|+|+||.+++.+|+.|.+... +.++++++.+|++||||||||+.||.+|+|||+||| |..++++|+ |++ +
T Consensus 63 ~p~liG~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~--y~~~i 137 (407)
T 2o56_A 63 SAIIIGMDPMNNEAIWEKMLKKTFWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLG---GKSREKIRT--YASQL 137 (407)
T ss_dssp HHHHTTSCTTCHHHHHHHHHHSSSGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSSEEE--EEECG
T ss_pred HHHhCCCChHHHHHHHHHHHHhccccCCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCCCCeeee--eeeec
Confidence 999999999999999999986431 112334456899999999999999999999999999 976666665 765 4
Q ss_pred c-C-CccC--CCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc------CCCcccCCCCCCCCC--CCCCcH
Q 012041 194 N-G-GSHA--GNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKY------GQDACNVGDEGGFAP--NVQDNR 261 (472)
Q Consensus 194 ~-g-g~~~--~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~------G~~~~~~~~~G~~~~--~~~~~~ 261 (472)
+ | +.|+ ++..+. .+.++++.+...+||+.+| .|. |.. -....|++.+ +++.+.
T Consensus 138 ~~g~~~~~~~~~~~~~---------~~~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~--~~s~~~~~~~~~~~~~~~ 202 (407)
T 2o56_A 138 QFGWGDGSDKDMLTEP---------EQYAQAALTAVSEGYDAIK----VDTVAMDRHGNW--NQQNLNGPLTDKILRLGY 202 (407)
T ss_dssp GGCCSTTCTTCCCCSH---------HHHHHHHHHHHHTTCSEEE----ECCSSBCTTSCB--SCSCCCSSCCHHHHHHHH
T ss_pred cCCccccccccccCCH---------HHHHHHHHHHHHcCCCEEE----EcccccCCcCcc--ccCcccCCCchhHHHHHH
Confidence 4 3 2222 111112 2234566666666787665 343 210 0011222221 112223
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcC
Q 012041 262 EGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQD 341 (472)
Q Consensus 262 ~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~ 341 (472)
+.++++|+++ | .++.|++|+| ++|+.+++++++ +.+++|++.|||||++++
T Consensus 203 e~v~avR~a~---G--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iE~P~~~~ 253 (407)
T 2o56_A 203 DRMAAIRDAV---G--PDVDIIAEMH-----------------------AFTDTTSAIQFG-RMIEELGIFYYEEPVMPL 253 (407)
T ss_dssp HHHHHHHHHH---C--TTSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSCEECSSCSS
T ss_pred HHHHHHHHhc---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEeCCCChh
Confidence 4444444443 3 2899999993 557889999885 568999999999999999
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDN 421 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s 421 (472)
|++++++|++++++||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++|+ |.+. +.++
T Consensus 254 ~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~-h~~~-s~i~ 330 (407)
T 2o56_A 254 NPAQMKQVADKVNIPLAAGER-IYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQI-HVCG-GPIS 330 (407)
T ss_dssp SHHHHHHHHHHCCSCEEECTT-CCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECC-CCCS-CHHH
T ss_pred hHHHHHHHHHhCCCCEEeCCC-cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEee-cCCC-CHHH
Confidence 999999999999999999997 567999999999999999999999999999999999999999999876 5444 7777
Q ss_pred HHHHHHHhhcCCC
Q 012041 422 FIADLSVGLASGQ 434 (472)
Q Consensus 422 ~~a~lAva~~~~~ 434 (472)
.++.++++...+.
T Consensus 331 ~aa~~hlaaa~~~ 343 (407)
T 2o56_A 331 TAVALHMETAIPN 343 (407)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 6555555443433
No 49
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=100.00 E-value=9.8e-47 Score=385.34 Aligned_cols=301 Identities=17% Similarity=0.212 Sum_probs=233.0
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+. ++.+ +..++|+|+|| |+ +||||+.++ +.|.+++..++.+
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~----------~G~GE~~~~-----~~~~~e~~~~~~~ 68 (365)
T 3ik4_A 4 PTTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGT----------LGLGEAAPF-----PAVSGETQTGTSA 68 (365)
T ss_dssp TTBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSC----------EEEEEECCC-----CTTTCCCHHHHHH
T ss_pred CCEEEEEEEEEEEEecCCCeEccCeEEEeeeEEEEEEEECCCC----------EEEEecccC-----CCcCcCCHHHHHH
Confidence 4999999998884 1222 35699999999 99 899998654 2577888888877
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.+ +.++|.|+|+|+.+++++|+.|.+... ...+|++|||+||||+.||.+|+|||+||| |.. +++|+
T Consensus 69 ~l-~~l~~~l~G~d~~~~~~~~~~l~~~~~------~~~~a~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~v~~-- 135 (365)
T 3ik4_A 69 AI-ERLQSHLLGADVRGWRKLAAMLDHAEH------EAAAARCGLEMAMLDALTRHYHMPLHVFFG---GVS-KQLET-- 135 (365)
T ss_dssp HH-HHHGGGTTTCBGGGHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEEB--
T ss_pred HH-HHHHHHHcCCCccCHHHHHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cceee--
Confidence 77 469999999999999999999986321 135799999999999999999999999999 975 56776
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
|.+++.+ +. ++..+++.+...+||+++| .|+|.. +++.+.+.++++|+
T Consensus 136 ~~~~~~~-------~~---------e~~~~~a~~~~~~G~~~iK----~Kvg~~------------~~~~d~~~v~avr~ 183 (365)
T 3ik4_A 136 DMTITAG-------DE---------VHAAASAKAILARGIKSIK----VKTAGV------------DVAYDLARLRAIHQ 183 (365)
T ss_dssp CEEECCS-------CH---------HHHHHHHHHHHHTTCCCEE----EECCSS------------CHHHHHHHHHHHHH
T ss_pred eEEecCC-------CH---------HHHHHHHHHHHHcCCCEEE----EEeCCC------------CHHHHHHHHHHHHH
Confidence 3332211 11 2334555556666777665 665521 12223444444444
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHH--hhCCeeEEeCCCCcCCHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFV--RDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l--~~~~l~~iEdP~~~~D~~~~~ 347 (472)
++ +++.|++|+ |++||.++++++ .+.+ ++|++.|||||++++|+++|+
T Consensus 184 ~~------~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~~~i~~iEeP~~~~d~~~~~ 233 (365)
T 3ik4_A 184 AA------PTAPLIVDG-----------------------NCGYDVERALAF-CAACKAESIPMVLFEQPLPREDWAGMA 233 (365)
T ss_dssp HS------SSCCEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCCEEEEECCSCTTCHHHHH
T ss_pred hC------CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHhhCCCCceEEECCCCcccHHHHH
Confidence 33 578999999 466889999988 4568 889999999999999999999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++++++||++||+ ++++++++++++.+++|++|||+++ ||||++++++++|+++|+++|+++ +.|+.++.++.++
T Consensus 234 ~l~~~~~ipIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~gi~~~~~~-~~es~ig~aa~~h 310 (365)
T 3ik4_A 234 QVTAQSGFAVAADES-ARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMIGG-MVESILAMSFSAN 310 (365)
T ss_dssp HHHHHSSSCEEESTT-CSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHHHHH
T ss_pred HHHhhCCCCEEECCC-CCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHcCCeEEecC-CcccHHHHHHHHH
Confidence 999999999999997 6789999999999999999999999 999999999999999999998766 5688777655555
Q ss_pred HhhcCCCcc
Q 012041 428 VGLASGQIK 436 (472)
Q Consensus 428 va~~~~~i~ 436 (472)
++...+...
T Consensus 311 laaa~p~~~ 319 (365)
T 3ik4_A 311 LAAGNGGFD 319 (365)
T ss_dssp HHHHHCCEE
T ss_pred HHHhCCCCC
Confidence 554333333
No 50
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=100.00 E-value=9.4e-47 Score=386.00 Aligned_cols=305 Identities=19% Similarity=0.217 Sum_probs=238.2
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+.+.+. .+.+ +..++|+|+|| |+ +||||+.+++ .|.+++.+++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~----------~G~GE~~~~~-----~~~~e~~~~~~~~ 65 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGILTHANNVIVRIHTASGH----------IGYGECSPFM-----TIHGESMDTAFIV 65 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCC----------EEEEEECCCH-----HHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEEeecCCCEEccCceEeeeeEEEEEEEECCCC----------EEEeeccCCC-----CcCCCCHHHHHHH
Confidence 899999998873 2222 35699999999 99 8999986532 4667777777766
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCccee-eeeE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVM-PVPA 189 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~v-p~~~ 189 (472)
+ +.++|.|+|+||.+++++|+.|++... + ..+|++||||||||+.||.+|+|||+||| |..+ ++ |+.
T Consensus 66 ~-~~l~~~l~G~d~~~~~~~~~~l~~~~~-~-----~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~-~v~~~~- 133 (368)
T 3q45_A 66 G-QYLAKGLIGTSCLDIVSNSLLMDAIIY-G-----NSCIKSAFNIALYDLAAQHAGLPLYAFLG---GKKD-KIIQTD- 133 (368)
T ss_dssp H-HHHHHHHTTSBTTCHHHHHHHHHHHCS-C-----CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCCC-SCEEBC-
T ss_pred H-HHHHHHhcCCChhhHHHHHHHHHHHhc-C-----CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCC-eeeeeE-
Confidence 6 479999999999999999999986321 1 24799999999999999999999999999 9854 66 652
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
..++.+ .+++..+++.+...+||+++| .|+|. +.+.+.+.++++|+
T Consensus 134 -~~~~~~----------------~~e~~~~~a~~~~~~G~~~~K----~KvG~-------------~~~~d~~~v~avR~ 179 (368)
T 3q45_A 134 -YTVSID----------------EPHKMAADAVQIKKNGFEIIK----VKVGG-------------SKELDVERIRMIRE 179 (368)
T ss_dssp -EEECSC----------------CHHHHHHHHHHHHHTTCSEEE----EECCS-------------CHHHHHHHHHHHHH
T ss_pred -EEecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEecC-------------CHHHHHHHHHHHHH
Confidence 222111 112334556666666787665 56552 11223445555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
++ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|
T Consensus 180 ~~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~~~~~~~~l 230 (368)
T 3q45_A 180 AA---G--DSITLRIDA-----------------------NQGWSVETAIET-LTLLEPYNIQHCEEPVSRNLYTALPKI 230 (368)
T ss_dssp HH---C--SSSEEEEEC-----------------------TTCBCHHHHHHH-HHHHGGGCCSCEECCBCGGGGGGHHHH
T ss_pred Hh---C--CCCeEEEEC-----------------------CCCCChHHHHHH-HHHHhhcCCCEEECCCChhHHHHHHHH
Confidence 44 3 289999999 466789999988 556899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++|++| +.|+.++.++.++++
T Consensus 231 ~~~~~iPIa~dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~~aa~~hla 308 (368)
T 3q45_A 231 RQACRIPIMADES-CCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG-FLESRLGFTAAAHVA 308 (368)
T ss_dssp HHTCSSCEEESTT-CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC-SSCCHHHHHHHHHHH
T ss_pred HhhCCCCEEEcCC-cCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC-ccccHHHHHHHHHHH
Confidence 9999999999997 67899999999999999999999999999999999999999999998776 568988877777777
Q ss_pred hcCCCcccCCC
Q 012041 430 LASGQIKTGAP 440 (472)
Q Consensus 430 ~~~~~i~~g~~ 440 (472)
...+.....++
T Consensus 309 aa~p~~~~~el 319 (368)
T 3q45_A 309 LVSKTICYYDF 319 (368)
T ss_dssp TTCTTEEEECC
T ss_pred HcCCCCceecc
Confidence 65555544443
No 51
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=100.00 E-value=8.3e-47 Score=389.79 Aligned_cols=315 Identities=18% Similarity=0.150 Sum_probs=234.3
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhh-cccC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGP-KLVG 121 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap-~LiG 121 (472)
|||++|+++.+. +...++|+|+|+|| |+ +||||+.+ .| |++..++...|+ .++| .|+|
T Consensus 3 mkI~~i~~~~v~-~~~~~~v~V~v~td~G~----------~G~GE~~~-------~~-g~~~~~~~~~i~-~l~~~~l~G 62 (392)
T 2poz_A 3 LKITGVNIYLLK-SGRLHPVLVEISTDEGI----------TGAGEAGI-------AY-GVGGTAAAGMIK-DLSERFLIG 62 (392)
T ss_dssp CCEEEEEEEECC-BTTBCCEEEEEEETTSC----------CEEEEESC-------SS-SSCHHHHHHHHH-HHHHHHTTT
T ss_pred CeEEEEEEEEEe-cCCccEEEEEEEECCCC----------EEEEeecC-------Cc-CCchHHHHHHHH-HhhHhhhcC
Confidence 899999999996 54445799999999 99 89999853 13 556667777776 4999 9999
Q ss_pred CCCCCHHHHHHHHHHh-cCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCC
Q 012041 122 VDIRDQAEVDAIMLEI-DGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAG 200 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~-~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~ 200 (472)
+||.+++.+|+.|.+. ..+.++++++.+|++||||||||+.||.+|+|||+||| |..++++|+ |++ | |..
T Consensus 63 ~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~~~v~~--y~~---g-~~~ 133 (392)
T 2poz_A 63 KDPSRIEELWSTMYDHSFWAKNGGAIIFAGISAIEQALWDIKGKCLGVPVYELFG---GKIRDRVRA--YAN---G-WYG 133 (392)
T ss_dssp CCTTCHHHHHHHHHHHSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEE--EEC---S-CCT
T ss_pred CChhHHHHHHHHHHHhcccccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcC---CCccCceEE--EEe---c-ccc
Confidence 9999999999999864 22223344557899999999999999999999999999 976655554 764 2 111
Q ss_pred CcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCC------CCCCCcHHHHHHHHHHHHHh
Q 012041 201 NNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFA------PNVQDNREGLVLLTDAIEKA 274 (472)
Q Consensus 201 ~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~------~~~~~~~~~l~~v~~av~~~ 274 (472)
+..+. .+.++++.+...+||+.+| .|.|..... +.-+++. .+++.+.+.++++|+++
T Consensus 134 ~~~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g~~~~g-~~~~~~~~gg~~~~~~~~~~e~v~avr~a~--- 196 (392)
T 2poz_A 134 AADTP---------DEFARAVERPLKEGYGALK----FYPLAQRVG-SALQHVTRRSMSAEAIELAYRRVKAVRDAA--- 196 (392)
T ss_dssp TCCSH---------HHHHHHTHHHHHTTCSEEE----ECCCCEEET-TEEECCBTTBCCHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCH---------HHHHHHHHHHHHcCCCEEE----Eeccccccc-ccccccccCCcchhhHHHHHHHHHHHHHhc---
Confidence 11112 2234556666666776665 555421100 0000010 11222334444444444
Q ss_pred CCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC
Q 012041 275 GYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD 354 (472)
Q Consensus 275 g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~ 354 (472)
| .++.|++|+| ++|+.+++++++ +.+++|++.|||||++++|++++++|+++++
T Consensus 197 G--~d~~l~vD~n-----------------------~~~~~~~a~~~~-~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ 250 (392)
T 2poz_A 197 G--PEIELMVDLS-----------------------GGLTTDETIRFC-RKIGELDICFVEEPCDPFDNGALKVISEQIP 250 (392)
T ss_dssp C--TTSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCEEEEECCSCTTCHHHHHHHHHHCS
T ss_pred C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCcccHHHHHHHHhhCC
Confidence 3 2799999993 567889999885 5589999999999999999999999999999
Q ss_pred CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCC
Q 012041 355 IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASG 433 (472)
Q Consensus 355 ~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~ 433 (472)
+||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++|+ |.+. +.++.++.++++...+
T Consensus 251 ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~-h~~~-s~i~~aa~~hlaaa~~ 326 (392)
T 2poz_A 251 LPIAVGER-VYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAP-HVCG-SSLIETATLQLEANIT 326 (392)
T ss_dssp SCEEECTT-CCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECC-CCCS-SHHHHHHHHHHHHHCT
T ss_pred CCEEecCC-cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEec-CCCC-CHHHHHHHHHHHHhCC
Confidence 99999997 466999999999999999999999999999999999999999999876 5456 7776655555544333
No 52
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=100.00 E-value=9.7e-47 Score=388.74 Aligned_cols=309 Identities=17% Similarity=0.191 Sum_probs=234.7
Q ss_pred ceEEEEEEEEEecCCCC----CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhc
Q 012041 44 AKVKSVKARQIIDSRGN----PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPK 118 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~----~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~ 118 (472)
|||++|+++.+...... ..++|+|+|| |+ +||||+.++.. .|.|.++++ .+.+.++|.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~V~v~td~G~----------~G~GE~~~~~~--~p~~~~e~~-----~i~~~l~p~ 63 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVNKHVIVKIHTDEGL----------TGIGEMSDFSH--LPLYSVDLH-----DLKQGLLSI 63 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEEEEEEEEEEETTSC----------EEEEEECCCSS--SSSCCCCHH-----HHHHHHHHH
T ss_pred CEEEEEEEEEEecccCCCcccceEEEEEEECCCC----------EEEeccccccC--CCccchhHH-----HHHHHHHHH
Confidence 89999999988432112 4689999999 99 89999864310 134667655 466789999
Q ss_pred ccCCCCCCHHHHHHHHHHhcC-CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCc
Q 012041 119 LVGVDIRDQAEVDAIMLEIDG-TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGS 197 (472)
Q Consensus 119 LiG~d~~d~e~i~~~l~~~~~-~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~ 197 (472)
|+|+||.+++++|+.|++... ......-+.+|++||||||||++||.+|+|||+||| |..++++|+ |.+++...
T Consensus 64 liG~d~~~~~~~~~~l~~~~~~~~~~~~g~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~--y~t~~~~~ 138 (391)
T 3gd6_A 64 LLGQNPFDLMKINKELTDNFPETMYYYEKGSFIRNGIDNALHDLCAKYLDISVSDFLG---GRVKEKIKV--CYPIFRHR 138 (391)
T ss_dssp HTTCCTTCHHHHHHHHHHHSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEB--CEEECCCS
T ss_pred hCCCCccCHHHHHHHHHHHhhhcccccCcchHHHHHHHHHHHHHHhcccCCcHHHHhC---CCcCCeEEe--eEEecccc
Confidence 999999999999999986321 111111235799999999999999999999999999 987778887 43332110
Q ss_pred cCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCC
Q 012041 198 HAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYT 277 (472)
Q Consensus 198 ~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~ 277 (472)
.. . +. ++.++++.+...+||+++| .|+|. +.+.+.+.++++|+++ |
T Consensus 139 ~~-~--~~---------e~~~~~a~~~~~~G~~~~K----iKvG~-------------~~~~d~~~v~avR~a~---g-- 184 (391)
T 3gd6_A 139 FS-E--EV---------ESNLDVVRQKLEQGFDVFR----LYVGK-------------NLDADEEFLSRVKEEF---G-- 184 (391)
T ss_dssp ST-T--HH---------HHHHHHHHHHHHTTCCEEE----EECSS-------------CHHHHHHHHHHHHHHH---G--
T ss_pred cC-C--CH---------HHHHHHHHHHHHcCCCEEE----EeeCC-------------CHHHHHHHHHHHHHHc---C--
Confidence 00 0 01 2334555555666776664 56541 1233445555555554 3
Q ss_pred CCcEEE-EecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCe--eEEeCCCCcCCHHHHHHHHhhcC
Q 012041 278 GKINIG-MDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPI--VSIEDPFDQDDWSSWASLQSSVD 354 (472)
Q Consensus 278 g~i~l~-vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l--~~iEdP~~~~D~~~~~~L~~~~~ 354 (472)
.++.|+ +|+ |++|+.++++++ .+.++++++ .|||||++++|++++++|+++++
T Consensus 185 ~~~~l~~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~ 240 (391)
T 3gd6_A 185 SRVRIKSYDF-----------------------SHLLNWKDAHRA-IKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTD 240 (391)
T ss_dssp GGCEEEEEEC-----------------------TTCSCHHHHHHH-HHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCS
T ss_pred CCCcEEEecC-----------------------CCCcCHHHHHHH-HHHHHhcCCCcceecCCCChhhHHHHHHHHHHcC
Confidence 279999 999 466889999987 566899999 99999999999999999999999
Q ss_pred CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCC
Q 012041 355 IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQ 434 (472)
Q Consensus 355 ~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~ 434 (472)
+|| ||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.++.++++...+.
T Consensus 241 iPI--dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hlaaa~~~ 316 (391)
T 3gd6_A 241 YPI--SEH-VWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT-TQELSVGTAAMAHLGCSLTN 316 (391)
T ss_dssp SCE--EEE-CCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHHHHHHHHHHTTCSS
T ss_pred CCc--CCC-CCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecC-CCccHHHHHHHHHHHHhCCC
Confidence 999 886 67899999999999999999999999999999999999999999998766 57898887777766655554
Q ss_pred cc
Q 012041 435 IK 436 (472)
Q Consensus 435 i~ 436 (472)
+.
T Consensus 317 ~~ 318 (391)
T 3gd6_A 317 IN 318 (391)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 53
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=100.00 E-value=1.7e-46 Score=385.86 Aligned_cols=302 Identities=14% Similarity=0.186 Sum_probs=220.9
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
.|||++|++... ++.++|+|+|| |+ +||||+.+ |.. +.....|.+.++|.|+|
T Consensus 22 ~mkIt~v~~~~~-----~~~~~V~v~Td~G~----------~G~GE~~~--------~~~---~~~~~~i~~~l~p~LiG 75 (388)
T 3tcs_A 22 SMKLKAIETFTN-----DAVGFVRVTTQDGA----------QGWGQVST--------YHA---DITCTVLHRQVAPWMLG 75 (388)
T ss_dssp -CBEEEEEEEEC-----SSCEEEEEEETTSC----------EEEEECCS--------SSH---HHHHHHHHHHTHHHHTT
T ss_pred ccEEEEEEEEEe-----CCeEEEEEEECCCC----------EEEEeccC--------Ccc---HHHHHHHHHHHHHHhCC
Confidence 399999997542 35699999999 99 89999742 332 23445677889999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
+||.+++++|+.|++.. ....+....+|++||||||||+.||.+|+|||+||| |.. +++|+ |++..+.
T Consensus 76 ~d~~~~e~l~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---g~~-~~v~~--y~s~~~~----- 143 (388)
T 3tcs_A 76 QDITDLDDLLDIVTERE-HKFPGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLG---GTP-GLIRA--YASSMKR----- 143 (388)
T ss_dssp SBCTTHHHHHHHHHHHT-TTCCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-EEEEE--EEECCCS-----
T ss_pred CCcccHHHHHHHHHHhh-hccCCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhC---CCC-CceEE--EEecCcC-----
Confidence 99999999999998532 122222234699999999999999999999999999 975 56665 6542111
Q ss_pred cccccceeeccCCcccHHHHHHH-HHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCc
Q 012041 202 NLAMQEFMILPVGATSFAEALRM-GSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKI 280 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~-~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i 280 (472)
..+. .+.++++.+. ..+||+++| .|+|... +.+ .....+.+.+.++++|+++ | +++
T Consensus 144 ~~~~---------~~~~~~~~~~~~~~Gf~~~K----~KvG~~~---~~d--~~~~~~~~~~~v~avReav---G--~d~ 200 (388)
T 3tcs_A 144 DITP---------RDEAERLKRLRDTQGFTAFK----VRAGAEV---GRN--RDEWPGRTEEIIPTMRREL---G--DDV 200 (388)
T ss_dssp SSCH---------HHHHHHHHHHHHHHCCCEEE----EECSCTT---CTT--CCSSTTHHHHHHHHHHHHH---C--SSS
T ss_pred CCCh---------HHHHHHHHHHHHhcCCCEEE----EccCCCc---ccc--cccchhHHHHHHHHHHHHh---C--CCC
Confidence 0111 1223333333 245776665 6665321 000 0000112244555555555 3 289
Q ss_pred EEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeC
Q 012041 281 NIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGD 360 (472)
Q Consensus 281 ~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~d 360 (472)
.|++|+ |++||.++|+++ .+.++++++.|||||++++|++++++|++++++||++|
T Consensus 201 ~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~d 256 (388)
T 3tcs_A 201 DLLIDA-----------------------NSCYTPDRAIEV-GHMLQDHGFCHFEEPCPYWELAQTKQVTDALDIDVTGG 256 (388)
T ss_dssp EEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCCEEECCSCTTCHHHHHHHHHHCSSCEEEC
T ss_pred eEEEeC-----------------------CCCcCHHHHHHH-HHHHhhcCCeEEECCCCccCHHHHHHHHHhcCCCEEcC
Confidence 999999 466889999988 56689999999999999999999999999999999999
Q ss_pred CccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcC
Q 012041 361 DLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLAS 432 (472)
Q Consensus 361 E~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~ 432 (472)
|+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++ +|.+.++ .+.++.++++...
T Consensus 257 E~-~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A~~~gv~~~-~h~~~~~-~~~~a~~hl~aa~ 325 (388)
T 3tcs_A 257 EQ-DCDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPVT-PHCANWS-LVTLFTMHLLRAI 325 (388)
T ss_dssp TT-CCCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCCBC-CCCCSTT-THHHHHHHHHTTC
T ss_pred Cc-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE-ecCCCcH-HHHHHHHHHHHhC
Confidence 97 67899999999999999999999999999999999999999999985 5644443 4434444444433
No 54
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.5e-46 Score=385.15 Aligned_cols=306 Identities=17% Similarity=0.220 Sum_probs=241.6
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNI 111 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i 111 (472)
|||++|+++.+. .+.+ +++++|+|+|+|+ +||||+.++.+ ++|.+++..++...|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t~G~----------~G~GE~~~~~~---~~~~~e~~~~~~~~i 67 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKAGGL----------VGIGEGGSVGG---PTWGSESAETIKVII 67 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTE----------EEEEEECCSTT---TTTSSCCHHHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecceEEEeceeEEEEEEECCE----------EEEEEeccCCC---CcccCCCHHHHHHHH
Confidence 899999998773 1221 3568999999888 89999865421 368888888888889
Q ss_pred HHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEE
Q 012041 112 NDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFN 191 (472)
Q Consensus 112 ~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 191 (472)
++.++|.|+|+||.+++.+|+.|.+... ...+|++|||+||||+.||.+|+|||+||| |..++++|++ .
T Consensus 68 ~~~l~~~l~G~d~~~~~~~~~~l~~~~~------~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~~~--~ 136 (370)
T 1nu5_A 68 DNYLAPLLVGKDASNLSQARVLMDRAVT------GNLSAKAAIDIALHDLKARALNLSIADLIG---GTMRTSIPIA--W 136 (370)
T ss_dssp HHTHHHHHTTSBTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CCSCSEEEBC--E
T ss_pred HHhhHHHHcCCCcccHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCcCCceEee--E
Confidence 8899999999999999999999986431 135799999999999999999999999999 9877788875 3
Q ss_pred eecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 192 VINGGSHAGNNLAMQEFMILPVGATSFAEALRMGS-EVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 192 ~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~-~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
+++++ +. ...++++.+... +||+.+| .|.|. .+++.+.+.++++|++
T Consensus 137 ~~~~~-------~~---------e~~~~~a~~~~~~~Gf~~iK----ik~g~------------~~~~~~~e~v~avr~a 184 (370)
T 1nu5_A 137 TLASG-------DT---------ARDIDSALEMIETRRHNRFK----VKLGA------------RTPAQDLEHIRSIVKA 184 (370)
T ss_dssp EECSS-------CH---------HHHHHHHHHHHHTTSCSEEE----EECSS------------SCHHHHHHHHHHHHHH
T ss_pred EecCC-------CH---------HHHHHHHHHHHHhCCccEEE----EecCC------------CChHHHHHHHHHHHHh
Confidence 33222 11 123345555555 5676554 45441 1122234555555555
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|+
T Consensus 185 ~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~~~~~~~~l~ 235 (370)
T 1nu5_A 185 V---G--DRASVRVDV-----------------------NQGWDEQTASIW-IPRLEEAGVELVEQPVPRANFGALRRLT 235 (370)
T ss_dssp H---G--GGCEEEEEC-----------------------TTCCCHHHHHHH-HHHHHHHTCCEEECCSCTTCHHHHHHHH
T ss_pred c---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCcceEeCCCCcccHHHHHHHH
Confidence 4 3 278999999 356788999988 5568999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ ++++++++++++.+++|+++||++++||+|++++++++|+++|+++|++| +.|++++.++.++++.
T Consensus 236 ~~~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~aa~~hlaa 313 (370)
T 1nu5_A 236 EQNGVAILADES-LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT-MLDSTVGTAAALHVYA 313 (370)
T ss_dssp HHCSSEEEESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHHHHHHHT
T ss_pred HhCCCCEEeCCC-CCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC-CcchHHHHHHHHHHHh
Confidence 999999999997 68899999999999999999999999999999999999999999998776 5799888777777766
Q ss_pred cCCCcc
Q 012041 431 ASGQIK 436 (472)
Q Consensus 431 ~~~~i~ 436 (472)
..+.+.
T Consensus 314 a~~~~~ 319 (370)
T 1nu5_A 314 TLPSLP 319 (370)
T ss_dssp TSSCCT
T ss_pred cCCCCC
Confidence 555444
No 55
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=100.00 E-value=2.8e-46 Score=384.83 Aligned_cols=300 Identities=15% Similarity=0.140 Sum_probs=232.0
Q ss_pred ceEEEEEEEEEecC---------C----CCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 44 AKVKSVKARQIIDS---------R----GNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~~~---------~----~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
|||++|+++.+... . .+..++|+|+|| |+ +||||+.++. |+|++++..++..
T Consensus 23 MkI~~i~~~~~~~pl~~~p~~~s~g~~~~~~~~~V~i~td~G~----------~G~GE~~~~~----~~~~~~~~~~~~~ 88 (391)
T 4e8g_A 23 MKIAEIHVYAHDLPVKDGPYTIASSTVWSLQTTLVKIVADSGL----------AGWGETCPVG----PTYAPSHALGARA 88 (391)
T ss_dssp CCEEEEEEEEEEC---------------CCEEEEEEEEETTSC----------EEEEEECCSS----TTTSSCCHHHHHH
T ss_pred CEEEEEEEEEEeeeCCCCCcccccceeeeeeEEEEEEEECCCC----------EEEecCcCCC----CccCCccHHHHHH
Confidence 99999999888422 1 135699999999 99 8999986541 3577666777777
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.|++ ++|.|+|+||.+++.+|+.|.+.. . + ..+|++||||||||+.||.+|+|||+||| |..++++|+
T Consensus 89 ~l~~-l~p~l~G~d~~~~~~~~~~l~~~~---~-g--~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~-- 156 (391)
T 4e8g_A 89 ALAE-MAPGLIGANPLQPLVLRRRMDGLL---C-G--HNYAKAAIDIAAYDLMGKHYGVRVADLLG---GVAAERVPS-- 156 (391)
T ss_dssp HHHH-HGGGGTTCCTTCHHHHHHHHHTTC---S-S--CHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSEEEC--
T ss_pred HHHH-HHHHHCCCCcCCHHHHHHHHHHHh---c-C--cHHHHHHHHHHHHHHHHHHcCChHHHhcC---CCCCCcEEE--
Confidence 7765 999999999999999999997531 1 1 24799999999999999999999999999 987778887
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
|.+++.+ +. ++..+++.+...+||+++| .|+|. .+. .++++.++.
T Consensus 157 y~s~~~~-------~~---------e~~~~~a~~~~~~G~~~~K----lKvg~------------~~~---~~d~~~v~a 201 (391)
T 4e8g_A 157 YYATGIG-------QP---------DEIARIAAEKVAEGFPRLQ----IKIGG------------RPV---EIDIETVRK 201 (391)
T ss_dssp CEEECSC-------CH---------HHHHHHHHHHHHTTCSEEE----EECCS------------SCH---HHHHHHHHH
T ss_pred eEEcCCC-------CH---------HHHHHHHHHHHHcCCcEEE----EcCCC------------CCH---HHHHHHHHH
Confidence 4333211 11 2334555555666776665 56552 111 334444443
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
+.+.+|- +++.|++|+ |++|+.++|+++ .+.+++|++ |||||+ +|++++++|
T Consensus 202 vR~a~gg-~~~~L~vDa-----------------------N~~w~~~~A~~~-~~~L~~~~i-~iEeP~--~~~~~~~~l 253 (391)
T 4e8g_A 202 VWERIRG-TGTRLAVDG-----------------------NRSLPSRDALRL-SRECPEIPF-VLEQPC--NTLEEIAAI 253 (391)
T ss_dssp HHHHHTT-TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHCTTSCE-EEESCS--SSHHHHHHH
T ss_pred HHHHhCC-CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHhhcCe-EEecCC--ccHHHHHHH
Confidence 3334430 279999999 466889999987 556899999 999996 599999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.++.++++
T Consensus 254 ~~~~~iPIa~dE~-~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hla 331 (391)
T 4e8g_A 254 RGRVQHGIYLDES-GEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDD-AWGGDIIAAACTHIG 331 (391)
T ss_dssp GGGCCSCEEESTT-CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEEC-SSCSHHHHHHHHHHH
T ss_pred HhhCCCCEEeCCC-CCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCC-cCCCHHHHHHHHHHH
Confidence 9999999999997 57899999999999999999999999999999999999999999998877 568888766655555
Q ss_pred hcCCC
Q 012041 430 LASGQ 434 (472)
Q Consensus 430 ~~~~~ 434 (472)
...+.
T Consensus 332 aa~p~ 336 (391)
T 4e8g_A 332 ATVQP 336 (391)
T ss_dssp TTSCG
T ss_pred HhCCC
Confidence 54444
No 56
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=100.00 E-value=1.6e-46 Score=389.10 Aligned_cols=321 Identities=16% Similarity=0.201 Sum_probs=223.7
Q ss_pred CceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccC
Q 012041 43 SAKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG 121 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG 121 (472)
.|||++|++..+ + .+++.++|+|+|| |+ +||||+. +++ +++...|.+.++|.|+|
T Consensus 3 ~mkIt~v~~~~~-~-~~~~~~~V~v~td~G~----------~G~GE~~---------~~~---~~~~~~i~~~l~p~liG 58 (410)
T 3dip_A 3 LPRITALRTIRL-P-ERPKLIWVEVETEDGL----------TGLGETF---------RGA---QAVEAVLHEQTAPAIIG 58 (410)
T ss_dssp CCBEEEEEEEEE-T-TEEEEEEEEEEETTSC----------EEEEEEE---------SCH---HHHHHHHHHTHHHHHTT
T ss_pred CCeEEEEEEEEE-C-CCCCEEEEEEEECCCC----------EEEEeCC---------CCh---HHHHHHHHHHHHHHhcC
Confidence 399999999776 3 2456799999999 99 8999931 222 34556677789999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEe-ecCCccCC
Q 012041 122 VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNV-INGGSHAG 200 (472)
Q Consensus 122 ~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~-~~gg~~~~ 200 (472)
+||.+++++|+.|++....++++....+|++||||||||++||.+|+|||+||| |+.++++|++.+.. ++|..+..
T Consensus 59 ~dp~~~e~~~~~~~~~~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~yas~~~~~g~~~~~ 135 (410)
T 3dip_A 59 RAAENITSISSELLNPYVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALG---GAARDRVPVYATCAGYDFNTSLG 135 (410)
T ss_dssp SBTTCHHHHHHHHTCCSSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEEEEEECTTTC-----
T ss_pred CCcchHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCcCCceeEEEeccccccccccc
Confidence 999999999999975211122223345799999999999999999999999999 98778888743211 11100000
Q ss_pred Cc------ccccceeeccC--CcccHHHHHHHHHHHHHHHHH-HH---HhhcCCCcccCCCCCCCCC--CCCCcHHHHHH
Q 012041 201 NN------LAMQEFMILPV--GATSFAEALRMGSEVYHILKG-II---KEKYGQDACNVGDEGGFAP--NVQDNREGLVL 266 (472)
Q Consensus 201 ~~------l~~~e~~~~p~--~~~~~~~a~~~~~~~~~~lk~-~l---k~k~G~~~~~~~~~G~~~~--~~~~~~~~l~~ 266 (472)
.. .+.+..+--|. .....+.+.+..++||+++|. .+ +.|.| .... +++.+.+.+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~~~~~~~~K~G----------~~~~~~~~~~d~e~v~a 205 (410)
T 3dip_A 136 GRRSIGSAELSTGPYDDQVAFMRDAGVLAESLVAEGYAAMKIWPFDDFASITP----------HHISLTDLKDGLEPFRK 205 (410)
T ss_dssp -----------------------CHHHHHHHHHHTTCSEEEECTTHHHHTTCT----------TCCCHHHHHHHHHHHHH
T ss_pred ccccccccccccccccchhhhhhhHHHHHHHHHHcCCCEEEECCccCcccccc----------CcCCHHHHHHHHHHHHH
Confidence 00 00000000000 001112233344556766651 00 00332 1100 11223444555
Q ss_pred HHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCC-CCcCCHHH
Q 012041 267 LTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDP-FDQDDWSS 345 (472)
Q Consensus 267 v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP-~~~~D~~~ 345 (472)
||+++ | .++.|++|+ |++||.++++++ .+.++++++.||||| ++++|+++
T Consensus 206 vR~a~---g--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~~~~~~ 256 (410)
T 3dip_A 206 IRAAV---G--QRIEIMCEL-----------------------HSLWGTHAAARI-CNALADYGVLWVEDPIAKMDNIPA 256 (410)
T ss_dssp HHHHH---T--TSSEEEEEC-----------------------TTCBCHHHHHHH-HHHGGGGTCSEEECCBSCTTCHHH
T ss_pred HHHHc---C--CCceEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCCcccHHH
Confidence 55544 3 279999999 466889999987 566899999999999 89999999
Q ss_pred HHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHH
Q 012041 346 WASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIAD 425 (472)
Q Consensus 346 ~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~ 425 (472)
+++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++ |.+ +.++.++.
T Consensus 257 ~~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~~--s~i~~aa~ 332 (410)
T 3dip_A 257 VADLRRQTRAPICGGEN-LAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAP-HXT--GPVALMAG 332 (410)
T ss_dssp HHHHHHHHCCCEEECTT-CCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEE-CSS--CHHHHHHH
T ss_pred HHHHHhhCCCCEEecCC-cCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEee-eCc--cHHHHHHH
Confidence 99999999999999997 678999999999999999999999999999999999999999999865 544 66665555
Q ss_pred HHHhhcCC
Q 012041 426 LSVGLASG 433 (472)
Q Consensus 426 lAva~~~~ 433 (472)
++++...+
T Consensus 333 ~hlaaa~p 340 (410)
T 3dip_A 333 LHLALHAP 340 (410)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 55554333
No 57
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=100.00 E-value=9.8e-47 Score=388.20 Aligned_cols=297 Identities=17% Similarity=0.222 Sum_probs=234.3
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+. ++.+ +..++|+|+|| |+ +||||+.+++ .|.+++..++..
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~----------~G~GE~~~~~-----~~~~e~~~~~~~ 68 (389)
T 3s5s_A 4 PTLIRRVSIEALDIPLHEPFGIAGGAQERAANLLVTVELADGT----------LGFGEAAPLP-----AFNGETQDGSRA 68 (389)
T ss_dssp TTBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEECCCH-----HHHSCCHHHHHH
T ss_pred CCEEEEEEEEEEEEecCCceeccCceEEeeeEEEEEEEECCCC----------EEEEeccCCC-----CcCccCHHHHHH
Confidence 4899999998873 2332 35699999999 99 8999986542 466777777777
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.++ .++|.|+|+||.+++++|+.|.+... . ...+|++|||+||||+.||.+|+|||+||| |.. +++|+.
T Consensus 69 ~l~-~l~~~l~G~d~~~~~~~~~~l~~~~~-~----~~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~v~~~- 137 (389)
T 3s5s_A 69 AAV-SLREAVVGSDARAWRAVARALREASG-G----GAGAARCAIETAILDALTKRAGMPLWAFFG---GSG-TALTTD- 137 (389)
T ss_dssp HHH-HTHHHHTTSBGGGHHHHHHHHHHHHT-T----CCHHHHHHHHHHHHHHHHHTTTCBHHHHTT---CSC-SEEECC-
T ss_pred HHH-HHHHHhcCCCccCHHHHHHHHHHhhc-c----ChHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-CceEEE-
Confidence 774 69999999999999999999986321 1 123799999999999999999999999999 976 567763
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
.+++.+ .+++..+++.+...+||+++| .|+|.. +++.+.+.++++|+
T Consensus 138 -~t~~~~----------------~~e~~~~~a~~~~~~G~~~iK----lKvg~~------------~~~~d~~~v~avR~ 184 (389)
T 3s5s_A 138 -ITITTG----------------SPERAEEAARRAAAMGFRALK----VKVGGR------------LAASDPARIEAIHA 184 (389)
T ss_dssp -EEECSS----------------CSHHHHHHHHHHHHHTCCEEE----EECCGG------------GTTTHHHHHHHHHH
T ss_pred -eeecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEecCC------------ChHHHHHHHHHHHH
Confidence 222211 112345566666667887665 665521 12344566666555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHH--hhCCeeEEeCCCCcCCHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFV--RDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l--~~~~l~~iEdP~~~~D~~~~~ 347 (472)
++ |++.|++|+ |++||.++|++++ +.+ ++|++.|||||++++|+++|+
T Consensus 185 ~~------~~~~L~vDa-----------------------N~~w~~~~A~~~~-~~L~~~~~~i~~iEeP~~~~d~~~~~ 234 (389)
T 3s5s_A 185 AA------PGASLILDG-----------------------NGGLTAGEALALV-AHARRLGADVALLEQPVPRDDWDGMK 234 (389)
T ss_dssp HC------TTCEEEEEC-----------------------TTCSCHHHHHHHH-HHHHHTTCEEEEEECCSCTTCHHHHH
T ss_pred hC------CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHhhCCCCeEEEECCCCcccHHHHH
Confidence 54 578999999 4678899999884 568 889999999999999999999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++++++||++||+ ++++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.|+.++.++.++
T Consensus 235 ~l~~~~~iPIa~dEs-~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~~gi~~~~~~-~~es~ig~aa~~h 311 (389)
T 3s5s_A 235 EVTRRAGVDVAADES-AASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAAGLGLMIGG-MVESVLAMTASAC 311 (389)
T ss_dssp HHHHHSSSCEEESTT-CSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHHTTCEEEECC-SSCCHHHHHHHHH
T ss_pred HHHhhCCCCEEECCC-CCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEecC-CcccHHHHHHHHH
Confidence 999999999999997 6789999999999999999999999 999999999999999999998766 5688776655555
Q ss_pred Hhhc
Q 012041 428 VGLA 431 (472)
Q Consensus 428 va~~ 431 (472)
++..
T Consensus 312 laaa 315 (389)
T 3s5s_A 312 FAAG 315 (389)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 5543
No 58
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=100.00 E-value=3.2e-47 Score=394.06 Aligned_cols=306 Identities=19% Similarity=0.208 Sum_probs=226.8
Q ss_pred hhcCCCceEEEEEEEEEe------------------------cCC----CCCeEEEEEEEC-CeeeeeccCCCcccccee
Q 012041 38 STASSSAKVKSVKARQII------------------------DSR----GNPTVEVDLITD-DLFRSAVPSGASTGIYEA 88 (472)
Q Consensus 38 ~~~~~~m~I~~V~~~~v~------------------------~~~----~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa 88 (472)
-|| ++|||++|+++.+- +++ .+.+++|+|+|| |+ +||||+
T Consensus 18 ~~~-~~m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~lV~v~td~G~----------~G~GE~ 86 (412)
T 3stp_A 18 LYF-QSMKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSFRFHQWLTCEVETEDGT----------IGIGNA 86 (412)
T ss_dssp ------CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTTCCCEEEEEEEEETTSC----------EEEEEE
T ss_pred eee-eccEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEEEeccEEEEEEEECCCC----------EEEEec
Confidence 345 56999999998772 111 134699999999 99 899997
Q ss_pred eeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCC
Q 012041 89 LELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGV 168 (472)
Q Consensus 89 ~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~ 168 (472)
.. .+ ..+...|++.++|.|+|+||.+++++|+.|++........++..+|++||||||||+.||.+|+
T Consensus 87 ~~---------~~---~~~~~~i~~~l~p~LiG~dp~~~e~l~~~~~~~~~~~g~~g~~~~A~saiD~ALwDl~gK~~g~ 154 (412)
T 3stp_A 87 AL---------AP---SVVKKVIDDWYAPLVIGEDPFDYAYIWEKMYRRSHAWGRKGIGMTAISAIDIAIWDLMGKLVGK 154 (412)
T ss_dssp CS---------SH---HHHHHHHHHTTHHHHTTSCGGGHHHHHHHHHHHTHHHHSSTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cC---------CH---HHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhhhcCC
Confidence 42 11 2455667788999999999999999999998632110012234679999999999999999999
Q ss_pred chHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCC
Q 012041 169 PLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVG 248 (472)
Q Consensus 169 Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~ 248 (472)
|||+||| |..++++|+ |++.. + . . +. ++..+++.+...+||+.+| .|+|..+.
T Consensus 155 Pv~~LLG---G~~r~~v~~--y~s~~-~--~-~--~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~gp~--- 207 (412)
T 3stp_A 155 PVFKLLG---GRTKDRIPV--YYSKL-Y--A-G--SI---------EAMQKEAEEAMKGGYKAFK----SRFGYGPK--- 207 (412)
T ss_dssp BHHHHHT---CCSSSSEEE--EEECC-C--S-C--CH---------HHHHHHHHHHHTTTCSEEE----EECCCCGG---
T ss_pred CHHHhcC---CCCCceEEE--EEEec-C--C-C--CH---------HHHHHHHHHHHHcCCCEEE----EecccCcc---
Confidence 9999999 987778887 54310 1 0 0 11 2334455555556776654 56553110
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhh
Q 012041 249 DEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRD 328 (472)
Q Consensus 249 ~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~ 328 (472)
+|+ .+++.+.+.++++|+++ | .++.|++|+ |++|+.++++++ .+.+++
T Consensus 208 -dg~--~~~~~die~v~avReav---G--~d~~L~vDa-----------------------N~~~~~~~Ai~~-~~~Le~ 255 (412)
T 3stp_A 208 -DGM--PGMRENLKRVEAVREVI---G--YDNDLMLEC-----------------------YMGWNLDYAKRM-LPKLAP 255 (412)
T ss_dssp -GHH--HHHHHHHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGG
T ss_pred -ccc--chHHHHHHHHHHHHHHc---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHh
Confidence 011 01122344555555544 3 289999999 466889999988 566899
Q ss_pred CCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCc
Q 012041 329 FPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWG 408 (472)
Q Consensus 329 ~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~ 408 (472)
+++.|||||++++|++++++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++
T Consensus 256 ~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~li~~~a~D~v~ik~~~~GGit~a~kia~~A~a~gi~ 334 (412)
T 3stp_A 256 YEPRWLEEPVIADDVAGYAELNAMNIVPISGGEH-EFSVIGCAELINRKAVSVLQYDTNRVGGITAAQKINAIAEAAQIP 334 (412)
T ss_dssp GCCSEEECCSCTTCHHHHHHHHHTCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEECCCCcccHHHHHHHHhCCCCCEEeCCC-CCCHHHHHHHHHcCCCCEEecChhhcCCHHHHHHHHHHHHHcCCE
Confidence 9999999999999999999999999999999997 678999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCChhhHHHHHHHhhc
Q 012041 409 VMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 409 ~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
+++++ +.++++||++|..
T Consensus 335 v~~h~-----~~aa~~hlaaA~~ 352 (412)
T 3stp_A 335 VIPHA-----GQMHNYHLTMANT 352 (412)
T ss_dssp BCCSS-----CSHHHHHHHHTCT
T ss_pred EEecc-----HHHHHHHHHHhCC
Confidence 86544 3567788886654
No 59
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=100.00 E-value=6.5e-47 Score=390.28 Aligned_cols=311 Identities=17% Similarity=0.135 Sum_probs=225.8
Q ss_pred ceEEEEEEEEEecC---CCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHH-------
Q 012041 44 AKVKSVKARQIIDS---RGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNIN------- 112 (472)
Q Consensus 44 m~I~~V~~~~v~~~---~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~------- 112 (472)
|||++|+++.+... ..+++++|+|+|| |+ +||||+... .......++
T Consensus 10 mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~----------~G~GE~~~~------------~~~~~~~~~~~~~~~~ 67 (394)
T 3mkc_A 10 APIKSIEFIPVNYQASNWSQNTVVVKVTDENGV----------YGLGEADGS------------PDAILAYANIETEHKW 67 (394)
T ss_dssp CCEEEEEEEEEEEC----CEEEEEEEEEETTSC----------EEEEEECSC------------HHHHHHHHTCCCCBTT
T ss_pred CeEEEEEEEEEecCCCCCCccEEEEEEEECCCC----------eEEEEecCc------------HHHHHHHHhcccchhh
Confidence 99999999988422 2356799999999 99 899997421 111222222
Q ss_pred -HhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEE
Q 012041 113 -DILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFN 191 (472)
Q Consensus 113 -~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 191 (472)
+.++|.|+|+||.+++++|+.|++.......++...+|++||||||||++||.+|+|||+||| |..++++|+ |.
T Consensus 68 ~~~l~p~liG~dp~~~e~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~ 142 (394)
T 3mkc_A 68 LTNITEKAIGRLPIEINAIWDAMYDATQWQGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLG---GTNKDKVHP--YL 142 (394)
T ss_dssp BCCTTTTTTTSCTTCHHHHHHHHHHHTHHHHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEECC--EE
T ss_pred HHHHHHHhCCCChhHHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeEE--EE
Confidence 248999999999999999999986311000112345799999999999999999999999999 987778876 54
Q ss_pred eecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHh-hcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 192 VINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKE-KYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 192 ~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~-k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
+++.... ...+.++. + .+..+++.+...+||+++| . |+|.. ..+.+.+.+.++++|++
T Consensus 143 s~~~~~~--~~~~~~~~-~----~~~~~~a~~~~~~G~~~~K----~~k~g~~----------~~~~~~d~e~v~avR~a 201 (394)
T 3mkc_A 143 TLYPAIP--VDASLDVA-I----KGYAPLLEKAKAHNIRAVK----VCVPIKA----------DWSTKEVAYYLRELRGI 201 (394)
T ss_dssp ECCCSCC---CCCHHHH-H----HHHHHHHHHHHHTTCSEEE----EECCTTC----------CCCHHHHHHHHHHHHHH
T ss_pred ecCCcCC--CCcchhhh-H----HHHHHHHHHHHHcCCCEEE----eCccCCC----------ccCHHHHHHHHHHHHHH
Confidence 4321000 00000000 0 0122344445556676654 4 54410 01122334455555554
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCcc-CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVL-SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~-s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
+ | .++.|++|+ |++| +.++++++ .+.++++++.|||||++++|++++++|
T Consensus 202 ~---G--~d~~l~vDa-----------------------N~~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~d~~~~~~l 252 (394)
T 3mkc_A 202 L---G--HDTDMMVDY-----------------------LYRFTDWYEVARL-LNSIEDLELYFAEATLQHDDLSGHAKL 252 (394)
T ss_dssp H---C--SSSEEEEEC-----------------------TTCCCCHHHHHHH-HHHTGGGCCSEEESCSCTTCHHHHHHH
T ss_pred h---C--CCCeEEEeC-----------------------CCCCCCHHHHHHH-HHHhhhcCCeEEECCCCchhHHHHHHH
Confidence 4 3 289999999 4668 89999988 566899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++ +|++ |+.++.+++++++
T Consensus 253 ~~~~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~i~~aa~~hla 329 (394)
T 3mkc_A 253 VENTRSRICGAEM-STTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVM-PHNW-KTGITSAAAIHYQ 329 (394)
T ss_dssp HHHCSSCBEECTT-CCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCC-SCHHHHHHHHHHH
T ss_pred HhhCCCCEEeCCC-CCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe-ecCC-CcHHHHHHHHHHH
Confidence 9999999999997 57799999999999999999999999999999999999999999986 5644 8887766555555
Q ss_pred hcCCC
Q 012041 430 LASGQ 434 (472)
Q Consensus 430 ~~~~~ 434 (472)
...+.
T Consensus 330 aa~p~ 334 (394)
T 3mkc_A 330 FAVGN 334 (394)
T ss_dssp HHTCC
T ss_pred HhCCC
Confidence 44443
No 60
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=100.00 E-value=3e-47 Score=388.14 Aligned_cols=306 Identities=18% Similarity=0.186 Sum_probs=238.7
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. ++.+ +..++|+|+|| |+ +||||+.+.+ .|.+++.+++.+.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~-----~~~~e~~~~~~~~ 65 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSIEEIDNLIVEIRTADGL----------LGLGAASPER-----HVTGETLEACHAA 65 (356)
T ss_dssp CBEEEEEEEEEEEEBC----------CEEEEEEEEEEETTSC----------EEEEEECCCH-----HHHCCCHHHHHHH
T ss_pred CEEEEEEEEEEEecccCCEEecCeEEEeeeEEEEEEEECCCC----------EEEecccCCC-----CcCcCCHHHHHHH
Confidence 899999998873 1222 34699999999 99 8999986532 3667778888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+||.+++++|+.|++... ...+|++|||+||||+.||.+|+|||+||| |. ++++|+ |
T Consensus 66 l~~~l~~~l~G~~~~~~~~~~~~l~~~~~------~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~-~~~v~~--~ 133 (356)
T 3ro6_B 66 LDHDRLGWLMGRDIRTLPRLCRELAERLP------AAPAARAALDMALHDLVAQCLGLPLVEILG---RA-HDSLPT--S 133 (356)
T ss_dssp HCGGGCTTTTTCBGGGHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHHHHHHTSBHHHHTC---CC-CSCEEB--C
T ss_pred HHHHhHHHhcCCCccCHHHHHHHHHHhhc------cchhHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCceee--e
Confidence 88889999999999999999999986311 125799999999999999999999999999 87 456776 3
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
.+++.+ +. ++..+++.+...+||+++| .|+|. +.+.+.+.++++|++
T Consensus 134 ~~~~~~-------~~---------~~~~~~a~~~~~~G~~~~K----~K~G~-------------~~~~d~~~v~avR~~ 180 (356)
T 3ro6_B 134 VTIGIK-------PV---------EETLAEAREHLALGFRVLK----VKLCG-------------DEEQDFERLRRLHET 180 (356)
T ss_dssp EEECSC-------CH---------HHHHHHHHHHHHTTCCEEE----EECCS-------------CHHHHHHHHHHHHHH
T ss_pred EEEcCC-------CH---------HHHHHHHHHHHHcCCCEEE----EEeCC-------------CHHHHHHHHHHHHHH
Confidence 333211 01 2334555555666776664 56541 122334455555554
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|+
T Consensus 181 ~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~ 231 (356)
T 3ro6_B 181 L---A--GRAVVRVDP-----------------------NQSYDRDGLLRL-DRLVQELGIEFIEQPFPAGRTDWLRALP 231 (356)
T ss_dssp H---T--TSSEEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCCCEECCSCTTCHHHHHTSC
T ss_pred h---C--CCCEEEEeC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCCCcHHHHHHHH
Confidence 4 3 289999999 466889999987 5668999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcC-CCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKK-SCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~-a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
+++++||++||+ ++++++++++++.+ ++|++|||++++||||++++++++|+++|++++++| +.|+.++.++.++++
T Consensus 232 ~~~~iPIa~dE~-~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~es~i~~aa~~hla 309 (356)
T 3ro6_B 232 KAIRRRIAADES-LLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGC-MDESRISIAAALHAA 309 (356)
T ss_dssp HHHHHTEEESTT-CCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECC-CSCCHHHHHHHHHHH
T ss_pred hcCCCCEEeCCc-CCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHHHHHHHHHHH
Confidence 999999999997 67899999999999 999999999999999999999999999999998766 578888776666666
Q ss_pred hcCCCcccCCC
Q 012041 430 LASGQIKTGAP 440 (472)
Q Consensus 430 ~~~~~i~~g~~ 440 (472)
...+......+
T Consensus 310 aa~p~~~~~e~ 320 (356)
T 3ro6_B 310 LACPATRYLDL 320 (356)
T ss_dssp HTCTTEEEECC
T ss_pred hcCCCCCeEec
Confidence 55555544443
No 61
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=100.00 E-value=2e-46 Score=383.50 Aligned_cols=296 Identities=19% Similarity=0.207 Sum_probs=235.7
Q ss_pred ceEEEEEEEEEec--------CCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQIID--------SRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~~--------~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+.. +.+ +..++|+|+|| |+ +||||+.+. |+|.+++.+++.+.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-----~~~~~e~~~~~~~~ 65 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGI----------VGVAEAPPR-----PFTYGETQTGIVAV 65 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSC----------EEEEEECCC-----TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEEeeeeEEEEEEEECCCC----------EEEEeccCC-----CCccCCCHHHHHHH
Confidence 8999999988841 222 35699999999 99 899998542 35778888888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+||.+++++|+.|.+.. ...+|++|||+||||+.||.+|+|||+||| | .++++|+ |
T Consensus 66 i~~~l~~~l~G~d~~~~~~~~~~l~~~~-------~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g-~~~~v~~--~ 132 (367)
T 3dg3_A 66 IEQYFAPALIGLTLTEREVAHTRMARTV-------GNPTAKAAIDMAMWDALGQSLRLSVSEMLG---G-YTDRMRV--S 132 (367)
T ss_dssp HHHTHHHHHTTCBTTCHHHHHHHHTTSC-------SCHHHHHHHHHHHHHHHHHHHTCBHHHHHT---C-CCSEEEE--E
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHhcc-------CchHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCCeEEE--E
Confidence 8889999999999999999999987531 135799999999999999999999999999 9 5677877 4
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
.+++.+ + +++.++++.+...+ ||+++| .|+|.. + .+.+.+.+++||+
T Consensus 133 ~~~~~~-------~---------~~~~~~~a~~~~~~~G~~~~K----~K~g~~-----------~-~~~d~~~v~avR~ 180 (367)
T 3dg3_A 133 HMLGFD-------D---------PVKMVAEAERIRETYGINTFK----VKVGRR-----------P-VQLDTAVVRALRE 180 (367)
T ss_dssp EEEESS-------C---------HHHHHHHHHHHHHHHCCCEEE----EECCCS-----------S-THHHHHHHHHHHH
T ss_pred EEecCC-------C---------HHHHHHHHHHHHHhcCccEEE----EeeCCC-----------h-hhhHHHHHHHHHH
Confidence 333211 0 12345566666666 787665 665521 1 0123555555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
++ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|
T Consensus 181 a~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l 231 (367)
T 3dg3_A 181 RF---G--DAIELYVDG-----------------------NRGWSAAESLRA-MREMADLDLLFAEELCPADDVLSRRRL 231 (367)
T ss_dssp HH---G--GGSEEEEEC-----------------------TTCSCHHHHHHH-HHHTTTSCCSCEESCSCTTSHHHHHHH
T ss_pred Hh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHHhCCCEEECCCCcccHHHHHHH
Confidence 55 3 279999999 466889999987 566899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|++|||++++ |||++++++++|+++|++++++| +.|+.++.++.++++
T Consensus 232 ~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hla 308 (367)
T 3dg3_A 232 VGQLDMPFIADES-VPTPADVTREVLGGSATAISIKTART-GFTGSTRVHHLAEGLGLDMVMGN-QIDGQIGTACTVSFG 308 (367)
T ss_dssp HHHCSSCEEECTT-CSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHHHHHHH
T ss_pred HHhCCCCEEecCC-cCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHHHHHHHHHcCCeEEECC-cCCcHHHHHHHHHHH
Confidence 9999999999997 67899999999999999999999999 99999999999999999998776 578887766655555
Q ss_pred hc
Q 012041 430 LA 431 (472)
Q Consensus 430 ~~ 431 (472)
..
T Consensus 309 aa 310 (367)
T 3dg3_A 309 TA 310 (367)
T ss_dssp TT
T ss_pred Hh
Confidence 43
No 62
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=100.00 E-value=3.3e-47 Score=392.05 Aligned_cols=307 Identities=15% Similarity=0.166 Sum_probs=231.7
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. ++.+ +..++|+|+|| |+ +||||+.++ |+|.+++.+++...
T Consensus 27 mkI~~i~~~~~~~Pl~~p~~~a~g~~~~~~~~~V~v~td~G~----------~G~GE~~~~-----~~~~~e~~~~~~~~ 91 (393)
T 3u9i_A 27 TTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGT----------RGYGEAAPF-----PAFNGETQDMAHAA 91 (393)
T ss_dssp TBEEEEEEEEEEEEBCC----------EEEEEEEEEEETTSC----------EEEEEECCC-----HHHHSCCHHHHHHH
T ss_pred cEEEEEEEEEEEEecCCceEccCceEEeeeEEEEEEEECCCC----------EEEEEeeCC-----CCcCcCCHHHHHHH
Confidence 999999998884 1222 35689999999 99 899998654 24677878877777
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
++ .++|.|+|+||.+++++|+.|.+.. . ...+|++|||+||||+.||.+|+|||+||| |.. +++|+.
T Consensus 92 l~-~l~p~l~G~d~~~~~~~~~~l~~~~--~----~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~v~~~-- 158 (393)
T 3u9i_A 92 IL-AARSLVEGADVREWRRIALALPALP--G----MTGSARCAIETAILDALTRRARLPLWAFFG---GAA-TSLETD-- 158 (393)
T ss_dssp HH-HTHHHHTTSBGGGHHHHHHHGGGST--T----CCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEECC--
T ss_pred HH-HHHHHhcCCCcCCHHHHHHHHHHhc--C----ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-CceEEE--
Confidence 74 6999999999999999999887521 1 135799999999999999999999999999 976 567763
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
..++.+ .+++..+++.+...+||+++| .|+|... .+........++++.++.+
T Consensus 159 ~t~~~~----------------~~e~~~~~a~~~~~~Gf~~iK----lKvg~~~-------~~~~~~~~~~~di~~v~av 211 (393)
T 3u9i_A 159 VTITTG----------------SVTAAARAAQAIVARGVTTIK----IKIGAGD-------PDATTIRTMEHDLARIVAI 211 (393)
T ss_dssp EEEC-------------------CHHHHHHHHHHHTTTCCEEE----EECC--------------CHHHHHHHHHHHHHH
T ss_pred EEecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEeCCCc-------ccccccccHHHHHHHHHHH
Confidence 222211 112345556666667787665 6665310 0000000023344444333
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHH--hhCCeeEEeCCCCcCCHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFV--RDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l--~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
.+.. |++.|++|+ |++||.++|+++ .+.+ ++|++.|||||++++|+++|++
T Consensus 212 R~a~---~d~~L~vDa-----------------------N~~w~~~~A~~~-~~~L~~~~~~i~~iEeP~~~~d~~~~~~ 264 (393)
T 3u9i_A 212 RDVA---PTARLILDG-----------------------NCGYTAPDALRL-LDMLGVHGIVPALFEQPVAKDDEEGLRR 264 (393)
T ss_dssp HHHS---TTSEEEEEC-----------------------CSCCCHHHHHHH-HHTTTTTTCCCSEEECCSCTTCTTHHHH
T ss_pred HHHC---CCCeEEEEc-----------------------cCCCCHHHHHHH-HHHHhhCCCCeEEEECCCCCCcHHHHHH
Confidence 3333 578999999 467889999988 5668 8899999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.|+.++.++++++
T Consensus 265 l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~-~~es~ig~aa~~hl 341 (393)
T 3u9i_A 265 LTATRRVPVAADES-VASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMIGG-MVESLLAMTVSACF 341 (393)
T ss_dssp HHHTCSSCEEESTT-CCSHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHHHHHH
T ss_pred HHhhCCCcEEeCCc-CCCHHHHHHHHHcCCCCEEEecccc-cCHHHHHHHHHHHHHcCCeEEecC-CcccHHHHHHHHHH
Confidence 99999999999997 6789999999999999999999999 999999999999999999997765 56888776555555
Q ss_pred hhcCCCc
Q 012041 429 GLASGQI 435 (472)
Q Consensus 429 a~~~~~i 435 (472)
+...+.+
T Consensus 342 aaa~p~~ 348 (393)
T 3u9i_A 342 AAGQGGF 348 (393)
T ss_dssp HHHHCCE
T ss_pred HhcCCCC
Confidence 5443333
No 63
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=100.00 E-value=1.2e-46 Score=385.81 Aligned_cols=303 Identities=19% Similarity=0.165 Sum_probs=225.0
Q ss_pred ceEEEEEEEEEec---------CCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 44 AKVKSVKARQIID---------SRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~~---------~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
|||++|+++.+.. +.+ +..++|+|+|| |+ +||||+.+.. ..+ +.+++..
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~~~~~~v~V~v~td~G~----------~G~GE~~~~~----~~~---~~~~~~~ 63 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGI----------EGYGFTGTHA----HLP---SDRLITS 63 (372)
T ss_dssp CBEEEEEEEEEEEECC------------EEEEEEEEEEETTSC----------EEEEEEEECC----CHH---HHHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCCCccccCceeEEEEEEEECCCC----------EEEEeccCcc----ccC---cHHHHHH
Confidence 8999999988731 111 24599999999 99 8999985421 011 1234556
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcC-CCCC-CccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeee
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDG-TPNK-SKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPV 187 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~-~~~~-~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~ 187 (472)
.|++.++|.|+|+||.+++++|+.|++... .+++ +++..+|++||||||||+.||.+|+|||+||| |..++++|+
T Consensus 64 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~g~~g~~~~A~said~AlwDl~gk~~g~Pv~~llG---g~~~~~v~~ 140 (372)
T 3tj4_A 64 CISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLG---GARTAGVEA 140 (372)
T ss_dssp HHHHTTHHHHTTSBTTCHHHHHHHHHTCHHHHTTCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSCEEE
T ss_pred HHHHHHHHHhCCCChhhHHHHHHHHHHhhHhhcCCcccHHHHHHHHHHHHHHHHhccccCCcHHHHcC---CCCCCCeEE
Confidence 677789999999999999999999975210 0111 13446799999999999999999999999999 987666776
Q ss_pred eEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHH
Q 012041 188 PAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVL 266 (472)
Q Consensus 188 ~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~ 266 (472)
|++++ +... .+. ++..+++.+...+ ||+++| .|+|. ++. .++++.
T Consensus 141 --y~s~~-~~~~---~~~---------~~~~~~a~~~~~~~G~~~~K----~Kvg~------------~~~---~~d~~~ 186 (372)
T 3tj4_A 141 --YNTDI-GWLS---FTL---------EDLLAGSARAVEEDGFTRLK----IKVGH------------DDP---NIDIAR 186 (372)
T ss_dssp --EECTT-CCTT---SCH---------HHHHHHHHHHHHTTCCCEEE----EECCC------------SSH---HHHHHH
T ss_pred --EEecC-CccC---CCH---------HHHHHHHHHHHHccCCCEEE----EcCCC------------CCH---HHHHHH
Confidence 65422 2100 011 2334556566666 776664 56542 112 334444
Q ss_pred HHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHH
Q 012041 267 LTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSW 346 (472)
Q Consensus 267 v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~ 346 (472)
++...+..| .++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++
T Consensus 187 v~avR~~~g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~~~~ 240 (372)
T 3tj4_A 187 LTAVRERVD--SAVRIAIDG-----------------------NGKWDLPTCQRF-CAAAKDLDIYWFEEPLWYDDVTSH 240 (372)
T ss_dssp HHHHHHHSC--TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHTTTSCEEEEESCSCTTCHHHH
T ss_pred HHHHHHHcC--CCCcEEeeC-----------------------CCCCCHHHHHHH-HHHHhhcCCCEEECCCCchhHHHH
Confidence 443333333 289999999 466789999988 456899999999999999999999
Q ss_pred HHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC-CCCChhhHHHH
Q 012041 347 ASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHR-SGETEDNFIAD 425 (472)
Q Consensus 347 ~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~-~~Et~~s~~a~ 425 (472)
++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++++. +.| ..+|
T Consensus 241 ~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~g~~~~----~~~~ 315 (372)
T 3tj4_A 241 ARLARNTSIPIALGEQ-LYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQ----VHVH 315 (372)
T ss_dssp HHHHHHCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCCTTTTT----THHH
T ss_pred HHHHhhcCCCEEeCCC-ccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCchHHH----HHHH
Confidence 9999999999999997 678999999999999999999999999999999999999999999864331 233 3567
Q ss_pred HHHhhc
Q 012041 426 LSVGLA 431 (472)
Q Consensus 426 lAva~~ 431 (472)
++.++.
T Consensus 316 l~aa~~ 321 (372)
T 3tj4_A 316 LSYWHP 321 (372)
T ss_dssp HHHHCT
T ss_pred HhhhCC
Confidence 777653
No 64
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=5e-47 Score=391.36 Aligned_cols=304 Identities=18% Similarity=0.194 Sum_probs=239.2
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. ++.+ +++++|+|+|| |+ +||||+.++.. |+|.++++.++...
T Consensus 20 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~----------~G~GE~~~~~~---~~~~~e~~~~~~~~ 86 (393)
T 1wuf_A 20 MYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGI----------HGYGELEAFPL---PDYTEETLSSAILI 86 (393)
T ss_dssp EECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSC----------EEEEEECCCSS---TTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEecceeEecCcEEEEEEEECCCC----------EEEEEeecCCC---CcccCCCHHHHHHH
Confidence 999999998773 2322 35799999999 98 89999865432 36888888888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+|+.+++.+|+.|..+.+ +.+|++||||||||+.||.+|+|||+||| | .++++|++.
T Consensus 87 i~~~l~p~l~G~d~~~~~~l~~~l~~~~g-------~~~a~~aid~AlwDl~gk~~g~Pl~~lLG---g-~~~~v~~~~- 154 (393)
T 1wuf_A 87 IKEQLLPLLAQRKIRKPEEIQELFSWIQG-------NEMAKAAVELAVWDAFAKMEKRSLAKMIG---A-TKESIKVGV- 154 (393)
T ss_dssp HHHTTHHHHHHCEESSTTHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---C-CCSEEEBCE-
T ss_pred HHHHHHHHHcCCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCCcceeeE-
Confidence 98889999999999999999998864321 35799999999999999999999999999 9 466788754
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
+++.+ . +. ++..+++.+...+||+++| .|+| + +.+.+.++++|++
T Consensus 155 -~~g~~----~--~~---------e~~~~~a~~~~~~G~~~~K----iKvg-------------~--~~d~~~v~avr~a 199 (393)
T 1wuf_A 155 -SIGLQ----Q--NV---------ETLLQLVNQYVDQGYERVK----LKIA-------------P--NKDIQFVEAVRKS 199 (393)
T ss_dssp -EECCC----S--CH---------HHHHHHHHHHHHHTCCEEE----EECB-------------T--TBSHHHHHHHHTT
T ss_pred -EeCCC----C--CH---------HHHHHHHHHHHHHhhHhhe----eccC-------------h--HHHHHHHHHHHHH
Confidence 33211 0 11 2234566666667787665 4432 1 2235555555443
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ +++.|++|+| +.|+.+++ ++ .+.+++|++.|||||++++|+++|++|+
T Consensus 200 ~------~~~~l~vDaN-----------------------~~~~~~~a-~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~ 248 (393)
T 1wuf_A 200 F------PKLSLMADAN-----------------------SAYNREDF-LL-LKELDQYDLEMIEQPFGTKDFVDHAWLQ 248 (393)
T ss_dssp C------TTSEEEEECT-----------------------TCCCGGGH-HH-HHTTGGGTCSEEECCSCSSCSHHHHHHH
T ss_pred c------CCCEEEEECC-----------------------CCCCHHHH-HH-HHHHHhCCCeEEECCCCCcCHHHHHHHH
Confidence 3 4799999993 45677788 77 4678999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++|+++ +.|+.++.+++++++.
T Consensus 249 ~~~~ipIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hlaa 326 (393)
T 1wuf_A 249 KQLKTRICLDEN-IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCGG-MLEAGVGRAHNIALAA 326 (393)
T ss_dssp TTCSSEEEECTT-CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHHHHHHHHHHT
T ss_pred HhCCCCEEECCC-cCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEecC-CcccHHHHHHHHHHHh
Confidence 999999999997 67899999999999999999999999999999999999999999998777 5799888777777764
Q ss_pred cCCCcccCCC
Q 012041 431 ASGQIKTGAP 440 (472)
Q Consensus 431 ~~~~i~~g~~ 440 (472)
...+..++++
T Consensus 327 ~~~~~~~~~l 336 (393)
T 1wuf_A 327 RNEFVFPGDI 336 (393)
T ss_dssp SSSCCSCBSC
T ss_pred CCCCCccccc
Confidence 3333333333
No 65
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=100.00 E-value=2e-46 Score=387.44 Aligned_cols=325 Identities=13% Similarity=0.113 Sum_probs=221.8
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGV 122 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~ 122 (472)
|||++|+++.+ . ..+..++|+|+|| |+ +||||+. +.++++ ...+.+.++|.|+|+
T Consensus 1 MkIt~ie~~~~-~-~~~~~~~V~v~td~G~----------~G~GE~~---------~~~~~~---~~~i~~~l~p~liG~ 56 (400)
T 4dxk_A 1 MKITKLETVRV-A-ERTNLLWVLVHTDEGI----------TGLGETF---------FGAETV---ETYVHEYIAPRVIGR 56 (400)
T ss_dssp CCEEEEEEEEE-T-TSTTEEEEEEEETTSC----------CEEEEEE---------SCHHHH---HHHHHHTHHHHHTTS
T ss_pred CeEEEEEEEEE-C-CCCCEEEEEEEECCCC----------EEEEcCC---------CCccHH---HHHHHHHHHHHhCCC
Confidence 89999999877 3 3456799999999 99 8999942 333333 334556799999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEE-eecCCccCCC
Q 012041 123 DIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFN-VINGGSHAGN 201 (472)
Q Consensus 123 d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~-~~~gg~~~~~ 201 (472)
||.+++++|+.|..+.+. +++++..+|++||||||||++||.+|+|||+||| |+.++++|++.+. .+.|..+...
T Consensus 57 dp~~~~~~~~~~~~~~~~-~~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~yas~~~~~~~~~~~~ 132 (400)
T 4dxk_A 57 DPLQIDLLAQDLVGYLGF-RSSGAEVRGNSAFDIALWDIFGKATNQPIAQLLG---GFSRREIRTYNTCAGTEYIKKATG 132 (400)
T ss_dssp CTTCHHHHHHHHCCSSSC-SSCSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSCEEEEBC------------
T ss_pred CcchHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCccCceeEEEecccccccccccc
Confidence 999999999999211111 1223345799999999999999999999999999 9877888874311 1111000000
Q ss_pred --------cccccceeeccCCccc-HHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCC--CCCCcHHHHHHHHHH
Q 012041 202 --------NLAMQEFMILPVGATS-FAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAP--NVQDNREGLVLLTDA 270 (472)
Q Consensus 202 --------~l~~~e~~~~p~~~~~-~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~--~~~~~~~~l~~v~~a 270 (472)
.....+.+. +..... .+.+.+...+||+++| .|.|.... .+..+++.. +++.+.+.++++|++
T Consensus 133 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~a~~~~~~G~~~~K----ik~g~~~~-~~~~~g~~~~~~~~~d~~~v~avR~a 206 (400)
T 4dxk_A 133 QQTANYGLSGGKDYDDL-NGFLHRADELAHSLLEDGITAMK----IWPFDAAA-EKTRGQYISMPDLKSALEPFEKIRKA 206 (400)
T ss_dssp -----------------------CHHHHHHHHHHTTCCEEE----ECTTHHHH-HHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhc-ccccccHHHHHHHHHHhCCCEEE----EcCCCccc-cccccCcCCHHHHHHHHHHHHHHHHH
Confidence 000000000 000001 1223344455676664 45331000 000011111 122234445555554
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | .++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++|+
T Consensus 207 ~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~~~~~~~~l~ 257 (400)
T 4dxk_A 207 V---G--DKMDIMVEF-----------------------HSMWQLLPAMQI-AKALTPYQTFWHEDPIKMDSLSSLTRYA 257 (400)
T ss_dssp H---G--GGSEEEEEC-----------------------TTCBCHHHHHHH-HHHTGGGCCSEEECCBCTTSGGGHHHHH
T ss_pred c---C--CCceEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCCCEEEcCCCcccHHHHHHHH
Confidence 4 3 279999999 466889999987 5668999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|.+. +.++.+++++++.
T Consensus 258 ~~~~iPIa~dE~-~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~-~h~~~-s~i~~aa~~hlaa 334 (400)
T 4dxk_A 258 AVSPAPISASET-LGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVA-PHXCT-GPVVLCASTHLSL 334 (400)
T ss_dssp HHCSSCEEECTT-CCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEE-EC-CC-CHHHHHHHHHHHH
T ss_pred HhCCCCEEecCC-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE-ecCCC-ChHHHHHHHHHHH
Confidence 999999999997 67899999999999999999999999999999999999999999986 56444 6666555555554
Q ss_pred cCCC
Q 012041 431 ASGQ 434 (472)
Q Consensus 431 ~~~~ 434 (472)
..+.
T Consensus 335 a~p~ 338 (400)
T 4dxk_A 335 NAPN 338 (400)
T ss_dssp HCTT
T ss_pred hCCC
Confidence 4433
No 66
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=100.00 E-value=1.5e-46 Score=384.96 Aligned_cols=306 Identities=20% Similarity=0.245 Sum_probs=242.3
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. .+.+ +++++|+|+|| |+ +||||+.++ ++|.+++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~----------~G~GE~~~~-----~~~~~~~~~~~~~~ 65 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGI----------IGYGEGVAD-----DHVTGESWESTFHT 65 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEECCC-----HHHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceeEEeeeEEEEEEEECCCC----------EEEEEecCC-----CCcCCCCHHHHHHH
Confidence 899999988773 2222 35799999999 98 899998653 24667788888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+|+.+++.+|+.|.+... .+.+|++|||+||||+.||.+|+|||+||| |..++++|++
T Consensus 66 i~~~l~~~l~g~d~~~~~~~~~~l~~~~~------~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~~~-- 134 (369)
T 2p8b_A 66 LKHTLTPALIGQNPMNIEKIHDMMDNTIY------GVPTAKAAIDIACFDIMGKKLNQPVYQLIG---GRYHEEFPVT-- 134 (369)
T ss_dssp HHHTHHHHHTTCCTTCHHHHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCCCSCEECC--
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHhc------CChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCceeee--
Confidence 98889999999999999999999986432 135899999999999999999999999999 9766678874
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
.+++++ +. .+..+++.+...+||+.+| .|.|. +.+.+.+.++++|++
T Consensus 135 ~~i~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~-------------~~~~~~e~v~avr~a 181 (369)
T 2p8b_A 135 HVLSIA-------DP---------ENMAEEAASMIQKGYQSFK----MKVGT-------------NVKEDVKRIEAVRER 181 (369)
T ss_dssp EEECSC-------CH---------HHHHHHHHHHHHTTCCEEE----EECCS-------------CHHHHHHHHHHHHHH
T ss_pred EEecCC-------Ch---------HHHHHHHHHHHHcCcCEEE----EEeCC-------------CHHHHHHHHHHHHHH
Confidence 333322 11 1234555555556676554 45431 122234555555555
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHH-HHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLG-DLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai-~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
+ | +++.|++|+| ++|+.++++ ++ .+.++++++.|||||++++|++++++|
T Consensus 182 ~---g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l 232 (369)
T 2p8b_A 182 V---G--NDIAIRVDVN-----------------------QGWKNSANTLTA-LRSLGHLNIDWIEQPVIADDIDAMAHI 232 (369)
T ss_dssp H---C--TTSEEEEECT-----------------------TTTBSHHHHHHH-HHTSTTSCCSCEECCBCTTCHHHHHHH
T ss_pred h---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHHhCCCcEEECCCCcccHHHHHHH
Confidence 4 3 2799999993 456778998 88 456899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|+++||++++||+|++++++++|+++|+++|++| +.|+.++.+++++++
T Consensus 233 ~~~~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~~a~~~la 310 (369)
T 2p8b_A 233 RSKTDLPLMIDEG-LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGS-MVESSVASSAGFHVA 310 (369)
T ss_dssp HHTCCSCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-SSCCHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCC-CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecC-CCccHHHHHHHHHHH
Confidence 9999999999997 68899999999999999999999999999999999999999999998877 579999888888887
Q ss_pred hcCCCcccCC
Q 012041 430 LASGQIKTGA 439 (472)
Q Consensus 430 ~~~~~i~~g~ 439 (472)
...+......
T Consensus 311 a~~~~~~~~e 320 (369)
T 2p8b_A 311 FSKKIITSVE 320 (369)
T ss_dssp TTCTTEEEEC
T ss_pred HcCCCCceec
Confidence 6655544333
No 67
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=100.00 E-value=4.6e-46 Score=382.96 Aligned_cols=303 Identities=20% Similarity=0.248 Sum_probs=233.9
Q ss_pred ceEEEEEEEEEec---------CCC-----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQIID---------SRG-----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~~---------~~~-----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+.+.+.. +.+ +..++|+|+|| |+ +||||+.++. ++|++++.+++.
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~~s~g~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~----~~~~~e~~~~~~ 68 (386)
T 3fv9_G 3 LKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGL----------TGWGESTPFG----STYIAAHAGGTR 68 (386)
T ss_dssp CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSC----------EEEEEECCST----TSSSSCCHHHHH
T ss_pred CEEEEEEEEEEEeecCCCceEecCceEEeeeeEEEEEEEECCCC----------EEEEecccCC----CccCcccHHHHH
Confidence 8999999988731 112 24689999999 99 8999986542 257777777777
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
+.|+ .++|.|+|+||.+++++|+.|++... + ..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 69 ~~l~-~l~~~l~G~d~~~~~~~~~~l~~~~~----g--~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~~~~v~~- 137 (386)
T 3fv9_G 69 AALE-LLAPAILGMDPRQHDRIWDRMRDTLK----G--HRDARAALDIACWDIAAQAAGLPLCDMTG---GRVAGPVPV- 137 (386)
T ss_dssp HHHH-HHHHHHTTSCTTCHHHHHHHHHHHCS----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSSCBCE-
T ss_pred HHHH-HHHHHhCCCCcCCHHHHHHHHHHHhc----C--cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceee-
Confidence 7775 59999999999999999999986321 1 25799999999999999999999999999 987778887
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|.+++.+ +. ++..+++.+...+||+++| .|+|... . . .+..++++.++
T Consensus 138 -y~s~~~~-------~~---------e~~~~~a~~~~~~G~~~~K----~Kvg~~~-------~-~---~~~~~d~~~v~ 185 (386)
T 3fv9_G 138 -ISSIGGD-------TP---------EAMRAKVARHRAQGFKGHS----IKIGASE-------A-E---GGPALDAERIT 185 (386)
T ss_dssp -EEEECSC-------CH---------HHHHHHHHHHHHTTCCEEE----EECCCCT-------T-T---THHHHHHHHHH
T ss_pred -eEecCCC-------CH---------HHHHHHHHHHHHCCCCEEE----EeccCCC-------C-C---CCHHHHHHHHH
Confidence 4443211 11 2234455555566777665 6655210 0 0 11234455544
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHH-hhCCeeEEeCCCCcCCHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFV-RDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l-~~~~l~~iEdP~~~~D~~~~~ 347 (472)
...+.+| .++.|++|+ |++||.++++++ .+.+ +++++ |||||++ |+++++
T Consensus 186 avR~a~G--~~~~L~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~i-~iEeP~~--~~~~~~ 236 (386)
T 3fv9_G 186 ACLADRQ--PGEWYLADA-----------------------NNGLTVEHALRM-LSLLPPGLDI-VLEAPCA--SWAETK 236 (386)
T ss_dssp HHTTTCC--TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHSCSSCCC-EEECCCS--SHHHHH
T ss_pred HHHHHcC--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHhhccCCc-EEecCCC--CHHHHH
Confidence 4333333 289999999 466889999987 4567 78999 9999999 899999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++.+++++
T Consensus 237 ~l~~~~~iPIa~dE~-~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~~aa~~h 314 (386)
T 3fv9_G 237 SLRARCALPLLLDEL-IQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQD-TVGSQISFAAILH 314 (386)
T ss_dssp HHHTTCCSCEEESTT-CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEEC-SSCCHHHHHHHHH
T ss_pred HHHhhCCCCEEeCCC-cCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeCC-CCCCHHHHHHHHH
Confidence 999999999999997 67899999999999999999999999999999999999999999999888 4688877666666
Q ss_pred HhhcCCC
Q 012041 428 VGLASGQ 434 (472)
Q Consensus 428 va~~~~~ 434 (472)
++...++
T Consensus 315 laaa~~~ 321 (386)
T 3fv9_G 315 LAQSTPR 321 (386)
T ss_dssp HHHTSCT
T ss_pred HHHhCCC
Confidence 6654444
No 68
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=100.00 E-value=1.4e-45 Score=381.24 Aligned_cols=301 Identities=19% Similarity=0.230 Sum_probs=236.8
Q ss_pred ceEEEEEEEEEecC--------CC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQIIDS--------RG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~~~--------~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+... .+ +++++|+|+|| |+ +||||+.++++ +|++++..++...
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~~----~~~~~~~~~~~~~ 68 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGL----------VGIADAGDTSS----WYRGETQDSITSM 68 (397)
T ss_dssp CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSC----------EEEEECCCCCT----TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEeccceEeeCceEEEEEEECCCC----------EEEEEEecccC----ccCCCCHHHHHHH
Confidence 89999999888321 11 45799999999 98 89999976543 4778888888888
Q ss_pred HHHhhhh-cccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 111 INDILGP-KLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 111 i~~~lap-~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
|++.++| .|+|+||.+++.+|+.|.... .+ ..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 69 i~~~l~~~~l~G~d~~~~~~l~~~l~~~~----~~--~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~~~~vp~-- 137 (397)
T 2qde_A 69 ICDFFAPKVLLGEDPTKIEKIVGRMDILT----RD--NNQAKATVDFALHDLVGKRFGVPVYQLLG---GKTIERIPL-- 137 (397)
T ss_dssp HHHTHHHHTTTTCCTTCHHHHHHHHHHHC----SS--CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSSEEB--
T ss_pred HHHhhhhHhhcCCChHhHHHHHHHhhhhh----cc--chhHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCCCcce--
Confidence 9888999 999999999999999984321 11 46899999999999999999999999999 976667776
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
|.+++.+ +. +...+++.+...+||+.+| .|.|. +++.+.+.++++|+
T Consensus 138 ~~~~g~~-------~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~-------------~~~~~~e~v~avR~ 184 (397)
T 2qde_A 138 GLVLGAG-------EP---------EAVAEEALAVLREGFHFVK----LKAGG-------------PLKADIAMVAEVRR 184 (397)
T ss_dssp CEECCCS-------CH---------HHHHHHHHHHHHHTCSCEE----EECCS-------------CHHHHHHHHHHHHH
T ss_pred EEECCCC-------CH---------HHHHHHHHHHHHhhhhhee----ecccC-------------CHHHHHHHHHHHHH
Confidence 4443211 11 1234556666666776665 45431 12223455555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|
T Consensus 185 a~---g--~d~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~~~~~~~~l 235 (397)
T 2qde_A 185 AV---G--DDVDLFIDI-----------------------NGAWTYDQALTT-IRALEKYNLSKIEQPLPAWDLDGMARL 235 (397)
T ss_dssp HH---C--TTSCEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSCEECCSCTTCHHHHHHH
T ss_pred hh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhCCCCEEECCCChhhHHHHHHH
Confidence 54 3 279999999 356788999988 557899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++|+++ +.|+.++.++.++++
T Consensus 236 ~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~ig~aa~~hla 313 (397)
T 2qde_A 236 RGKVATPIYADES-AQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGC-MVGSGLEASPAAHLL 313 (397)
T ss_dssp HTTCSSCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC-CSCCHHHHHHHHHHH
T ss_pred HhhCCCCEEEeCC-cCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEec-CcccHHHHHHHHHHH
Confidence 9999999999997 56799999999999999999999999999999999999999999987665 468887765555555
Q ss_pred hcCC
Q 012041 430 LASG 433 (472)
Q Consensus 430 ~~~~ 433 (472)
...+
T Consensus 314 a~~~ 317 (397)
T 2qde_A 314 AAND 317 (397)
T ss_dssp HHCT
T ss_pred HhCC
Confidence 4333
No 69
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=100.00 E-value=1.7e-45 Score=379.76 Aligned_cols=304 Identities=12% Similarity=0.134 Sum_probs=228.7
Q ss_pred ceEEEEEEEEEec-------CCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhh
Q 012041 44 AKVKSVKARQIID-------SRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDIL 115 (472)
Q Consensus 44 m~I~~V~~~~v~~-------~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~l 115 (472)
|||++|+++.+.. +.++++++|+|+|| |+ +||||+.+++ +.+ +++...|++ +
T Consensus 11 MkI~~i~~~~~~p~~~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~------~~~---~~~~~~i~~-l 70 (391)
T 2qgy_A 11 GKLSRLKIWITDNHLSDDQWSNTKKFIIIKITTEDGI----------EGWGEAFSIN------FRE---KGIAIIIKE-L 70 (391)
T ss_dssp CCEEEEEEEEECCCBCGGGCSBCCCCEEEEEEETTCC----------EEEEEECCCT------TTH---HHHHHHHHH-H
T ss_pred CEEEEEEEEEecCccccccccCCCcEEEEEEEECCCC----------EEEecccCCC------CCh---HHHHHHHHH-H
Confidence 9999999999952 22457899999999 99 8999986431 223 334455766 9
Q ss_pred hhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecC
Q 012041 116 GPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVING 195 (472)
Q Consensus 116 ap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 195 (472)
+|.|+|+||.+++.+|+.|.++...++++++ .+|++|||+||||+.||.+|+|||+||| |..++++|+ |+ +|
T Consensus 71 ~p~l~G~d~~~~~~i~~~l~~~~~~~~g~~~-~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~~~~vp~--~~--~g 142 (391)
T 2qgy_A 71 FREISNIPNLSIKSFYNKISLLSDGHRGLDF-SSATSAIEIALWDISGKLKNLPLNSLLT---KSPKPNVPI--YA--TC 142 (391)
T ss_dssp HHHHTTCTTCCHHHHHHHHHHHHTTCCCHHH-HHHHHHHHHHHHHHHHHHHTSBHHHHHC---SSCCSEEEE--EE--EC
T ss_pred HHHhcCCChhHHHHHHHHHHhhhhhccCchH-HHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCcCCCcce--EE--ec
Confidence 9999999999999999999763322222223 6899999999999999999999999999 976666665 65 22
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhC
Q 012041 196 GSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAG 275 (472)
Q Consensus 196 g~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g 275 (472)
+.+.. .+. .+..+++.+...+||+.+| .|.| ..+ .+.+.+.++++|+++ |
T Consensus 143 ~~~~~--~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g-----------~~~-~~~~~e~v~avR~a~---G 192 (391)
T 2qgy_A 143 WSDLK--KDT---------NDYLRQIEKFYGKKYGGIK----IYPM-----------LDS-LSISIQFVEKVREIV---G 192 (391)
T ss_dssp CCSSC--CCH---------HHHHHHHHHHHHTTCSCEE----ECCC-----------CSS-HHHHHHHHHHHHHHH---C
T ss_pred ccCCC--CCH---------HHHHHHHHHHHHcCCCEEE----EccC-----------CCh-HHHHHHHHHHHHHHh---C
Confidence 22100 111 2234555555556666554 3433 110 122344455555444 3
Q ss_pred CCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCC
Q 012041 276 YTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDI 355 (472)
Q Consensus 276 ~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~ 355 (472)
+++.|++|+ |++|+.+++++++ +.++++++.|||||++++|++++++|++++++
T Consensus 193 --~d~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~i 246 (391)
T 2qgy_A 193 --DELPLMLDL-----------------------AVPEDLDQTKSFL-KEVSSFNPYWIEEPVDGENISLLTEIKNTFNM 246 (391)
T ss_dssp --SSSCEEEEC-----------------------CCCSCHHHHHHHH-HHHGGGCCSEEECSSCTTCHHHHHHHHHHCSS
T ss_pred --CCCEEEEEc-----------------------CCCCCHHHHHHHH-HHHHhcCCCeEeCCCChhhHHHHHHHHhhCCC
Confidence 279999999 3567899999884 55899999999999999999999999999999
Q ss_pred eEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC-hhhHHHHHHHhhcCCC
Q 012041 356 QLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGET-EDNFIADLSVGLASGQ 434 (472)
Q Consensus 356 pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et-~~s~~a~lAva~~~~~ 434 (472)
||++||+ ++++++++++++.+++|+++||++++||+|++++++++|+++|+++|+++ + |+ .++.++.++++...+.
T Consensus 247 PIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~-~-~~~~i~~aa~~hlaaa~~~ 323 (391)
T 2qgy_A 247 KVVTGEK-QSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHC-W-NSMSVSASAMLHVCSSIPN 323 (391)
T ss_dssp CEEECTT-CCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBC-C-SCTTHHHHHHHHHHHHCTT
T ss_pred CEEEcCC-cCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccC-C-CCcHHHHHHHHHHHHhCCC
Confidence 9999997 56799999999999999999999999999999999999999999987665 4 66 7776555555544443
No 70
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=100.00 E-value=2.1e-45 Score=380.77 Aligned_cols=321 Identities=17% Similarity=0.119 Sum_probs=227.9
Q ss_pred ceEEEEEEEEEecCCCCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCC
Q 012041 44 AKVKSVKARQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGV 122 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~ 122 (472)
|||++|+++.+ +..+++.++|+|+|| |+ +||||+.. .|+.+++. ..+ +.++|.|+|+
T Consensus 3 MkI~~i~~~~~-~~~~~~~~~V~v~td~G~----------~G~GE~~~-------~~~~~~~~---~~i-~~l~p~liG~ 60 (409)
T 3go2_A 3 LKVVSVDTLCC-DAGWRNYHFVKLTTDEGI----------VGWSEFDE-------GFGSPGVT---AVI-EQLGKRLVGA 60 (409)
T ss_dssp CBEEEEEEEEE-ECSSSEEEEEEEEETTCC----------EEEEEECS-------TTTCTTHH---HHH-HHHHHHHTTS
T ss_pred CEEEEEEEEEE-CCCCccEEEEEEEECCCC----------EEEEeecC-------CCCcHHHH---HHH-HHHHHHhcCC
Confidence 99999999877 444567899999999 99 89999753 24444443 334 5699999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCc
Q 012041 123 DIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNN 202 (472)
Q Consensus 123 d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~ 202 (472)
||.+++++|+.|++... ++.+.+..+|++||||||||++||.+|+|||+||| |+.++++|+ |.+..++... +.
T Consensus 61 d~~~~e~~~~~~~~~~~-~~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~s~~~~~~i-~~ 133 (409)
T 3go2_A 61 SVMEHERFFAEAYCLTR-PATGGVVSEGIGAIENALLDAKAKTLNVPCYELLG---GKLRDRVPV--YWSHCPTWRI-NH 133 (409)
T ss_dssp BTTCHHHHHHHHHHHHG-GGCSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSEEEE--EECSTTHHHH-HC
T ss_pred ChhhHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeEEE--EEeecCcccc-cc
Confidence 99999999999986322 11223345799999999999999999999999999 987788887 4332111000 00
Q ss_pred ccc-cceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcc------cCCCCCCCCCCCCC-------cHHHHHHHH
Q 012041 203 LAM-QEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDAC------NVGDEGGFAPNVQD-------NREGLVLLT 268 (472)
Q Consensus 203 l~~-~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~------~~~~~G~~~~~~~~-------~~~~l~~v~ 268 (472)
.+. .+. ....++..+++.+..++||+++| +|++.... +.|..+.+.++.+. +.+.+++||
T Consensus 134 ~~~~~~~--~~~~e~~~~~a~~~~~~Gf~~iK----lKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR 207 (409)
T 3go2_A 134 PKFFGPP--VTDLDGVKRTAEEARERQFRAIK----TNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALR 207 (409)
T ss_dssp TTTSSSC--CCSHHHHHHHHHHHHHTTCCEEE----ECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccC--CCCHHHHHHHHHHHHHcCCCEEE----EcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHH
Confidence 000 000 00112234455555566787665 55411000 00100001122111 123444444
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
+++ | .++.|++|+ |++||.++++++ .+.++++++.|||||+ +|++++++
T Consensus 208 ~av---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iE~P~--~d~~~~~~ 256 (409)
T 3go2_A 208 DGA---G--PDVEILLDL-----------------------NFNAKPEGYLKI-LRELADFDLFWVEIDS--YSPQGLAY 256 (409)
T ss_dssp HHH---C--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHTTTSCCSEEECCC--SCHHHHHH
T ss_pred HHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCCeEEEeCc--CCHHHHHH
Confidence 444 3 289999999 466889999988 5668999999999997 49999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||+++ ||||++++++++|+++|+++++ | +.|+.++.++++++
T Consensus 257 l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~-h-~~~s~i~~aa~~hl 332 (409)
T 3go2_A 257 VRNHSPHPISSCET-LFGIREFKPFFDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAP-H-NFYGHLCTMINANF 332 (409)
T ss_dssp HHHTCSSCEEECTT-CCHHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEE-C-CCSCHHHHHHHHHH
T ss_pred HHhhCCCCEEeCCC-cCCHHHHHHHHHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEee-c-CCCcHHHHHHHHHH
Confidence 99999999999997 5679999999999999999999999 9999999999999999999975 7 47888776655555
Q ss_pred hhcCCC
Q 012041 429 GLASGQ 434 (472)
Q Consensus 429 a~~~~~ 434 (472)
+...+.
T Consensus 333 aaa~p~ 338 (409)
T 3go2_A 333 AAAVPN 338 (409)
T ss_dssp HHHCSS
T ss_pred HHcCCC
Confidence 543433
No 71
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=100.00 E-value=8.8e-46 Score=380.36 Aligned_cols=295 Identities=18% Similarity=0.226 Sum_probs=225.2
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+. ++.+ ++.++|+|+|| |+ +||||+.++ .. +...+..
T Consensus 26 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~----------~G~GE~~~~--------~~-~~~~~~~ 86 (383)
T 3toy_A 26 TAAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGV----------TGHSYLFAY--------TR-LALKPLV 86 (383)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEESSSC----------EEEEEEECS--------SG-GGHHHHH
T ss_pred CCEEEEEEEEEEeccCCCcccCccccccceeEEEEEEEECCCC----------EEEEEeeCC--------CC-chHHHHH
Confidence 3999999998873 2222 35699999999 99 899998542 11 2234556
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.+.+.++|.|+|+|+.+++ +|+.|.+.......+++..+|++|||+||||+.||.+|+|||+||| |.. +++|+
T Consensus 87 ~i~~~l~p~l~G~d~~~~e-~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~v~~-- 159 (383)
T 3toy_A 87 HLVEDIGRELAGKALVPVD-LMKAMDAKFRLLGWQGLVGMAVSGLDMAFWDALGQLAGKPVVELLG---GSA-RPIPA-- 159 (383)
T ss_dssp HHHHHHHHHTTTCBCCHHH-HHHHHHHHTTTTCCSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-CCEEE--
T ss_pred HHHHHHHHHhCCCCCCcHH-HHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-CceEE--
Confidence 6778899999999999999 9999986322111122335799999999999999999999999999 875 56766
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|+++ |.. + +++.++++.+...+ ||+++| .|+|. .+.+.+.+.++++|
T Consensus 160 y~s~--g~~-----~---------~e~~~~~a~~~~~~~G~~~~K----lKvG~------------~~~~~d~~~v~avR 207 (383)
T 3toy_A 160 YDSY--GVL-----D---------ARDDERTLRTACDEHGFRAIK----SKGGH------------GDLATDEAMIKGLR 207 (383)
T ss_dssp EEEC--SSC-----C---------HHHHHHHHHHHHHTSCCCEEE----EECCS------------SCHHHHHHHHHHHH
T ss_pred eEec--CCC-----C---------HHHHHHHHHHHHHccCCcEEE----EecCC------------CCHHHHHHHHHHHH
Confidence 6542 210 1 12345566666666 777665 56552 12233445555555
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
+++ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++++
T Consensus 208 ~a~---G--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~ 258 (383)
T 3toy_A 208 ALL---G--PDIALMLDF-----------------------NQSLDPAEATRR-IARLADYDLTWIEEPVPQENLSGHAA 258 (383)
T ss_dssp HHH---C--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSCTTCHHHHHH
T ss_pred HHh---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEEECCCCcchHHHHHH
Confidence 554 3 289999999 466889999988 55689999999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++ |.+. .+.+|++.
T Consensus 259 l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~-h~~~----~a~lhl~a 332 (383)
T 3toy_A 259 VRERSEIPIQAGEN-WWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSS-HILP----EASAHVLP 332 (383)
T ss_dssp HHHHCSSCEEECTT-CCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBCC-CSCH----HHHHHHGG
T ss_pred HHhhcCCCEEeCCC-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEee-cCHH----HHHHHHHH
Confidence 99999999999997 678999999999999999999999999999999999999999999864 4332 34566665
Q ss_pred hh
Q 012041 429 GL 430 (472)
Q Consensus 429 a~ 430 (472)
++
T Consensus 333 a~ 334 (383)
T 3toy_A 333 VT 334 (383)
T ss_dssp GC
T ss_pred hC
Confidence 54
No 72
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=100.00 E-value=8.7e-46 Score=380.03 Aligned_cols=298 Identities=16% Similarity=0.144 Sum_probs=230.3
Q ss_pred ceEEEEEEEEEe--------cCCC------CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG------NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~------~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+++.+. .+.+ +..++|+|+|| |+ +||||+.++. +.|.+++.+++.
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~----~~~~~~~~~~~~ 68 (378)
T 3eez_A 3 LKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGI----------TGWGEGTPWG----HTYVPAHGPGIR 68 (378)
T ss_dssp CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCC----------CEEEEECCSC----SSSSSCCHHHHH
T ss_pred cEEEEEEEEEEeccCCCceeecCCcceeeeeeEEEEEEEECCCC----------EEEecccCCC----CccCCCcHHHHH
Confidence 899999998884 1223 24699999999 99 8999986542 257777777777
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
+.|+ .++|.|+|+||.+++++|+.|++... + ..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 69 ~~l~-~l~p~l~G~d~~~~~~~~~~l~~~~~----g--~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~~r~~v~~- 137 (378)
T 3eez_A 69 AGIE-TMAPFVLGLDPRRLLDVERAMDIALP----G--HLYAKSPIDMACWDIAGQAAGLPIADLMG---GGSRTPRPI- 137 (378)
T ss_dssp HHHH-HHHHHHTTSCTTCHHHHHHHHHHHSS----S--CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCCCSCEEB-
T ss_pred HHHH-HHHHHhcCCCcCCHHHHHHHHHHHhc----C--cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCCeEEE-
Confidence 7775 59999999999999999999986311 1 24799999999999999999999999999 987778887
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|.+++++ +. ++..+++.+...+||+.+| .|+|. + ..++++.++
T Consensus 138 -~~~~~~~-------~~---------e~~~~~a~~~~~~G~~~iK----iK~G~-------------~---~~~d~~~v~ 180 (378)
T 3eez_A 138 -ASSVGAK-------SV---------EETRAVIDRYRQRGYVAHS----VKIGG-------------D---VERDIARIR 180 (378)
T ss_dssp -BCCBCSC-------CH---------HHHHHHHHHHHHTTCCEEE----EECCS-------------C---HHHHHHHHH
T ss_pred -EEEecCC-------CH---------HHHHHHHHHHHhCCCCEEE----eccCC-------------C---HHHHHHHHH
Confidence 4332211 11 1233444455556676554 55541 1 234455444
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
...+.+| +++.|++|+ |++|+.++++++ .+.++++++ |||||++ |++++++
T Consensus 181 avR~a~g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i-~iEqP~~--~~~~~~~ 231 (378)
T 3eez_A 181 DVEDIRE--PGEIVLYDV-----------------------NRGWTRQQALRV-MRATEDLHV-MFEQPGE--TLDDIAA 231 (378)
T ss_dssp HHTTSCC--TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHTGGGTC-CEECCSS--SHHHHHH
T ss_pred HHHHHcC--CCceEEEEC-----------------------CCCCCHHHHHHH-HHHhccCCe-EEecCCC--CHHHHHH
Confidence 3333332 289999999 466889999987 566899999 9999998 9999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||++++||+|++++++++|+++|++++++| +.|+.++.++.+++
T Consensus 232 l~~~~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~-~~es~i~~aa~~hl 309 (378)
T 3eez_A 232 IRPLHSAPVSVDEC-LVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMA-TGGSVLADAEALHL 309 (378)
T ss_dssp TGGGCCCCEEECTT-CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEEC-SSCSHHHHHHHHHH
T ss_pred HHhhCCCCEEECCC-CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCC-CCCCHHHHHHHHHH
Confidence 99999999999997 67899999999999999999999999999999999999999999999888 46888776666665
Q ss_pred hhcCCC
Q 012041 429 GLASGQ 434 (472)
Q Consensus 429 a~~~~~ 434 (472)
+...+.
T Consensus 310 aaa~~~ 315 (378)
T 3eez_A 310 AATIPD 315 (378)
T ss_dssp HHTSCG
T ss_pred HHhCCC
Confidence 554444
No 73
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=100.00 E-value=3.8e-46 Score=384.52 Aligned_cols=304 Identities=17% Similarity=0.168 Sum_probs=229.3
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
-|||++|+++.+. ++.+ +..++|+|+|| |+ +||||+.. +++ +..
T Consensus 23 mMkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~----------~G~GE~~~----------g~~---~~~ 79 (398)
T 4dye_A 23 MMKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGV----------EGWGETMW----------GAP---VAA 79 (398)
T ss_dssp CCCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEEEC----------SHH---HHH
T ss_pred CceEEEEEEEEEeecccccccccccccccceEEEEEEEECCCC----------EEEEeecC----------chH---HHH
Confidence 4999999998883 2322 34699999999 99 89999842 222 334
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.| +.++|.|+|+||.+++.+|+.|.+... . .+..+.+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 80 ~i-~~l~p~liG~d~~~~~~~~~~l~~~~~-~-~g~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~-- 151 (398)
T 4dye_A 80 IV-RRMAPDLIGTSPFALEAFHRKQHMVPF-F-YGYLGYAAIAAVDVACWDAMGKATGQSVTDLLG---GAVRDEVPI-- 151 (398)
T ss_dssp HH-HHHHHHHTTCCTTCHHHHHHHTTTHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEB--
T ss_pred HH-HHHHHHHcCCCccCHHHHHHHHHhhhh-h-hccccHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCcCCeEEE--
Confidence 45 679999999999999999998853110 0 011245899999999999999999999999999 987778887
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|.++.. ...++..... .+++..+++.+...+ ||+++| .|+|. +.+.+.+.++++|
T Consensus 152 y~s~~~-~~~~g~~~~~------~~e~~~~~a~~~~~~~G~~~~K----~KvG~-------------~~~~d~~~v~avR 207 (398)
T 4dye_A 152 TALITR-ADAPGATPAD------LPKAMAEHAVRVVEEGGFDAVK----LKGTT-------------DCAGDVAILRAVR 207 (398)
T ss_dssp EEEECG-GGSTTCCTTT------HHHHHHHHHHHHHHHHCCSEEE----EECCS-------------CHHHHHHHHHHHH
T ss_pred EEEEec-cccCCcccCC------CHHHHHHHHHHHHHhcCCCEEE----EecCC-------------CHHHHHHHHHHHH
Confidence 444311 0000000000 012334556666666 787665 56541 1122344444444
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
+++ +++.|++|+ |++||.++|+++ .+.++++++.|||||++ |++++++
T Consensus 208 ~~~------~~~~l~vDa-----------------------N~~w~~~~A~~~-~~~l~~~~i~~iEqP~~--d~~~~~~ 255 (398)
T 4dye_A 208 EAL------PGVNLRVDP-----------------------NAAWSVPDSVRA-GIALEELDLEYLEDPCV--GIEGMAQ 255 (398)
T ss_dssp HHC------TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSS--HHHHHHH
T ss_pred HhC------CCCeEEeeC-----------------------CCCCCHHHHHHH-HHHHhhcCCCEEcCCCC--CHHHHHH
Confidence 443 478999999 466889999987 56689999999999999 9999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++++ ++|++++.++++++
T Consensus 256 l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~~e~~i~~aa~l~l 333 (398)
T 4dye_A 256 VKAKVRIPLCTNMC-VVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNLHS-GGELGIATAAHLAV 333 (398)
T ss_dssp HHHHCCSCEEESSS-CCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SCCCHHHHHHHHHH
T ss_pred HHhhCCCCEEeCCc-CCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEEcC-CcchHHHHHHHHHH
Confidence 99999999999997 67889999999999999999999999999999999999999999987655 78998888888888
Q ss_pred hhcCCCc
Q 012041 429 GLASGQI 435 (472)
Q Consensus 429 a~~~~~i 435 (472)
+...+.+
T Consensus 334 aaa~p~~ 340 (398)
T 4dye_A 334 VSSTPVL 340 (398)
T ss_dssp HHTCTTC
T ss_pred HhcCCcc
Confidence 7655443
No 74
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=100.00 E-value=1.8e-45 Score=379.12 Aligned_cols=297 Identities=16% Similarity=0.196 Sum_probs=224.9
Q ss_pred ceEEEEEEEEEecC-----C---------CCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQIIDS-----R---------GNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~~~-----~---------~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+++.+-.. . .++.++|+|+|| |+ +||||+.. +.+..+ +..
T Consensus 3 MkI~~i~~~~~~~pl~~~~p~~~a~~~~~~~~~~~V~v~td~G~----------~G~GE~~~------~~~~~~---~~~ 63 (389)
T 3ozy_A 3 LKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGV----------TGVGSPSG------PYDLAV---LKR 63 (389)
T ss_dssp CCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSC----------CEEECCCS------SSCHHH---HHH
T ss_pred CEEEEEEEEEEeccCcCCCcccccccccccceEEEEEEEECCCC----------EEEEecCC------CCCchH---HHH
Confidence 89999999888421 1 135699999999 99 89999851 122233 333
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHh---cCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcce-
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEI---DGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELV- 184 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~---~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~- 184 (472)
..++ .++|.|+|+||.+++++|+.|++. .+.++ +....+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 64 ~~i~-~l~p~l~G~d~~~~~~~~~~l~~~~~~~~~g~-~~~~~~A~said~AlwDl~gK~~g~Pl~~LLG---g~~r~~~ 138 (389)
T 3ozy_A 64 AIED-VIGPQLIGEDPANINYLWHKVFHGEVSRNLGH-RSVGIAAMSGVDIALWDLKGRAMNQPIYQLLG---GKFHTRG 138 (389)
T ss_dssp HHHH-TTHHHHTTSCTTCHHHHHHHHHHHTHHHHHCS-BSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SCSSTTC
T ss_pred HHHH-HHHHHHcCCCcchHHHHHHHHHhhhhhhccCC-chHHHHHHHHHHHHHHHHhHhHcCCCHHHHhC---CcccCCc
Confidence 4454 599999999999999999999763 21111 22345799999999999999999999999999 986777
Q ss_pred eeeeEEEeecC-CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHH
Q 012041 185 MPVPAFNVING-GSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREG 263 (472)
Q Consensus 185 vp~~~~~~~~g-g~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~ 263 (472)
+|+ |+++.| .. +. ++..+++.+...+||+++| .|+|. +.+.+.+.
T Consensus 139 v~~--y~~~~~~~~------~~---------e~~~~~a~~~~~~G~~~iK----iKvG~-------------~~~~d~~~ 184 (389)
T 3ozy_A 139 VRA--YASSIYWDL------TP---------DQAADELAGWVEQGFTAAK----LKVGR-------------APRKDAAN 184 (389)
T ss_dssp EEE--EEEEECSSC------CH---------HHHHHHHHHHHHTTCSEEE----EECCS-------------CHHHHHHH
T ss_pred eee--EEecCCCCC------CH---------HHHHHHHHHHHHCCCCEEe----eccCC-------------CHHHHHHH
Confidence 887 544311 10 11 1234445555556776664 56541 12334455
Q ss_pred HHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCH
Q 012041 264 LVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDW 343 (472)
Q Consensus 264 l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~ 343 (472)
++++|+++ | .++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 185 v~avR~a~---g--~d~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~ 235 (389)
T 3ozy_A 185 LRAMRQRV---G--ADVEILVDA-----------------------NQSLGRHDALAM-LRILDEAGCYWFEEPLSIDDI 235 (389)
T ss_dssp HHHHHHHH---C--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCSEEESCSCTTCH
T ss_pred HHHHHHHc---C--CCceEEEEC-----------------------CCCcCHHHHHHH-HHHHHhcCCCEEECCCCcccH
Confidence 55555554 3 289999999 466889999987 566899999999999999999
Q ss_pred HHHHHHH-hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 012041 344 SSWASLQ-SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNF 422 (472)
Q Consensus 344 ~~~~~L~-~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~ 422 (472)
+++++|+ +++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++ .| +.++.++.
T Consensus 236 ~~~~~l~~~~~~iPIa~dE~-i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~-~h-~~~~~i~~ 312 (389)
T 3ozy_A 236 EGHRILRAQGTPVRIATGEN-LYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWN-PH-TFNDIITV 312 (389)
T ss_dssp HHHHHHHTTCCSSEEEECTT-CCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEEC-CC-CTTSHHHH
T ss_pred HHHHHHHhcCCCCCEEeCCC-CCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE-ec-CCCcHHHH
Confidence 9999999 999999999997 57799999999999999999999999999999999999999999986 56 34787765
Q ss_pred HHHHHHhh
Q 012041 423 IADLSVGL 430 (472)
Q Consensus 423 ~a~lAva~ 430 (472)
++.++++.
T Consensus 313 aa~~hlaa 320 (389)
T 3ozy_A 313 AANLHLVA 320 (389)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55444443
No 75
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=100.00 E-value=9.3e-46 Score=381.29 Aligned_cols=296 Identities=18% Similarity=0.213 Sum_probs=225.6
Q ss_pred ceEEEEEEEEEec--------CCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCcc-CcchHHHHHH
Q 012041 44 AKVKSVKARQIID--------SRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVY-GGKGVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~~--------~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~-~g~~~~~a~~ 109 (472)
|||++|+++.+.. +.+ ++.++|+|+|| |+ +||||+.+. ++ .+.+..+ .
T Consensus 10 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~------~~~~~~~~~~--~ 71 (392)
T 3ddm_A 10 ITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGA----------VGWGEVWCN------FPACGAEHRA--R 71 (392)
T ss_dssp BCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSC----------EEEEECCCC------SSTTHHHHHH--H
T ss_pred CEEEEEEEEEEeccCCCcccCcCceeecceEEEEEEEECCCC----------EEEEEeccC------CCCCchHHHH--H
Confidence 9999999988741 211 35699999999 99 899998421 11 1222222 2
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHh----cCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCccee
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEI----DGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVM 185 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~----~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~v 185 (472)
.|++.++|.|+|+||.+++++|+.|++. .......+...+|++||||||||+.||.+|+|||+||| |.. +++
T Consensus 72 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~v 147 (392)
T 3ddm_A 72 LVETVLAPLLTARAFADPAQAFAHLEARTAVLAIQTGEPGPLAQAIAGLDIALCDLAARRAGQPLWAWLG---GSG-DRI 147 (392)
T ss_dssp HHHHTHHHHHTTSCBSSHHHHHHHHHHTTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-CEE
T ss_pred HHHHHHHHHhCCCCcCCHHHHHHHHHhhhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCC-Cce
Confidence 4577899999999999999999999863 10000111235799999999999999999999999999 976 677
Q ss_pred eeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHH
Q 012041 186 PVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLV 265 (472)
Q Consensus 186 p~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~ 265 (472)
|+ |++ |. . | ++..+++.+...+||+.+| .|+|. +.+.+.+.++
T Consensus 148 ~~--y~~---g~------~-------~--e~~~~~a~~~~~~G~~~iK----lK~g~-------------~~~~d~~~v~ 190 (392)
T 3ddm_A 148 GV--YAS---GI------N-------P--ENPEDVVARKAAEGYRAFK----LKVGF-------------DDARDVRNAL 190 (392)
T ss_dssp EE--EEE---EE------C-------S--SSHHHHHHHHHHHTCCCEE----EECSS-------------CHHHHHHHHH
T ss_pred eE--Eee---cC------C-------H--HHHHHHHHHHHHcCCCEEE----EecCC-------------CHHHHHHHHH
Confidence 77 554 21 1 1 2334556666667787665 56541 1233445555
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCC-HH
Q 012041 266 LLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDD-WS 344 (472)
Q Consensus 266 ~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D-~~ 344 (472)
++|+++ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++| ++
T Consensus 191 avR~a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~d~~~ 241 (392)
T 3ddm_A 191 HVRELL---G--AATPLMADA-----------------------NQGWDLPRARQM-AQRLGPAQLDWLEEPLRADRPAA 241 (392)
T ss_dssp HHHHHH---C--SSSCEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSEEECCSCTTSCHH
T ss_pred HHHHhc---C--CCceEEEeC-----------------------CCCCCHHHHHHH-HHHHHHhCCCEEECCCCccchHH
Confidence 555554 3 279999999 466889999987 56689999999999999999 99
Q ss_pred HHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHH
Q 012041 345 SWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIA 424 (472)
Q Consensus 345 ~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a 424 (472)
++++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++ ++|+ .|+.++.++
T Consensus 242 ~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~-~~h~-~~~~i~~aa 318 (392)
T 3ddm_A 242 EWAELAQAAPMPLAGGEN-IAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRY-CPHY-LGAGIGLQA 318 (392)
T ss_dssp HHHHHHHHCSSCEEECTT-CCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEE-CCEE-CSCHHHHHH
T ss_pred HHHHHHHhcCCCEEeCCC-CCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEE-EecC-CchHHHHHH
Confidence 999999999999999997 6789999999999999999999999999999999999999999998 4774 588777655
Q ss_pred HHHHhh
Q 012041 425 DLSVGL 430 (472)
Q Consensus 425 ~lAva~ 430 (472)
.++++.
T Consensus 319 ~~hl~a 324 (392)
T 3ddm_A 319 SAHLLA 324 (392)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 76
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=100.00 E-value=4e-45 Score=374.62 Aligned_cols=298 Identities=19% Similarity=0.235 Sum_probs=232.2
Q ss_pred ceEEEEEEEEEec---C------CC-----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQIID---S------RG-----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~~---~------~~-----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+++.+.. . .+ +++++|+|+|| |+ +||||+.++ . +.|.+++..++.
T Consensus 4 MkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-~---~~~~~~~~~~~~ 69 (371)
T 2ps2_A 4 LKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGI----------EGWGESTPF-G---SNYIASHPRGVR 69 (371)
T ss_dssp CCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSC----------EEEEEECCS-T---TTSSSCCHHHHH
T ss_pred CEEEEEEEEEEecccCCCCeeecccceeccCceEEEEEEECCCC----------EEEEEEecC-C---cccCCCCHHHHH
Confidence 8999999988841 1 11 24589999999 98 899998654 1 357788888888
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
..|++ ++|.|+|+|+.+++.+|+.|.+... .+.+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 70 ~~i~~-l~~~l~g~d~~~~~~~~~~l~~~~~------~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~vp~- 138 (371)
T 2ps2_A 70 AGIAT-MAPSLIGLDPRRVDRINDAMDDALL------GHEDAKTAIDVACWDIFGKSVGLPVCELLG---GRTNTRLPL- 138 (371)
T ss_dssp HHHHH-HHHHHTTSCTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSSCEEB-
T ss_pred HHHHH-HHHHHCCCCcccHHHHHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCceEE-
Confidence 88876 9999999999999999999976321 135899999999999999999999999999 976666776
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|.+++++ +. .+..+++.+...+||+.+| .|.|. + ....++.++
T Consensus 139 -~~~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~-------------~---~~~~~e~v~ 181 (371)
T 2ps2_A 139 -ISSIYVG-------EP---------EDMRARVAKYRAKGYKGQS----VKISG-------------E---PVTDAKRIT 181 (371)
T ss_dssp -EEEECSC-------CH---------HHHHHHHHHHHTTTCCEEE----EECCS-------------C---HHHHHHHHH
T ss_pred -EEEeCCC-------CH---------HHHHHHHHHHHHhChheEE----eecCC-------------C---HHHHHHHHH
Confidence 6555432 11 1234455555555666554 44331 1 233444443
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHH-hhCCeeEEeCCCCcCCHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFV-RDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l-~~~~l~~iEdP~~~~D~~~~~ 347 (472)
...+..| .++.|++|+ |++|+.+++++++ +.+ +++++ |||||++ |+++++
T Consensus 182 avr~a~g--~~~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~~i-~iE~P~~--~~~~~~ 232 (371)
T 2ps2_A 182 AALANQQ--PDEFFIVDA-----------------------NGKLSVETALRLL-RLLPHGLDF-ALEAPCA--TWRECI 232 (371)
T ss_dssp HHTTTCC--TTCEEEEEC-----------------------TTBCCHHHHHHHH-HHSCTTCCC-EEECCBS--SHHHHH
T ss_pred HHHHhcC--CCCEEEEEC-----------------------CCCcCHHHHHHHH-HHHHhhcCC-cCcCCcC--CHHHHH
Confidence 3322233 279999999 3567889999885 557 99999 9999998 999999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++++++||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|+++|++|+ .|+.++.+++++
T Consensus 233 ~l~~~~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~aa~~h 310 (371)
T 2ps2_A 233 SLRRKTDIPIIYDEL-ATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQET-CGSDIAFAAIVH 310 (371)
T ss_dssp HHHTTCCSCEEESTT-CCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECS-SCCHHHHHHHHH
T ss_pred HHHhhCCCCEEeCCC-cCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCC-CcCHHHHHHHHH
Confidence 999999999999997 688999999999999999999999999999999999999999999998885 489887766666
Q ss_pred HhhcCCC
Q 012041 428 VGLASGQ 434 (472)
Q Consensus 428 va~~~~~ 434 (472)
++...+.
T Consensus 311 laa~~~~ 317 (371)
T 2ps2_A 311 LAQTIPE 317 (371)
T ss_dssp HHTTSCT
T ss_pred HHHhCCC
Confidence 6654443
No 77
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=100.00 E-value=1.4e-45 Score=374.34 Aligned_cols=296 Identities=15% Similarity=0.182 Sum_probs=232.6
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. .+.+ +++++|+|+|| |+ +||||+.++ ++|.++++.++...
T Consensus 2 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-----~~~~~e~~~~~~~~ 66 (345)
T 2zad_A 2 SRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGV----------KGYGEASPS-----FRVNGERVEALLAI 66 (345)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEECCC-----HHHHCCCHHHHHHT
T ss_pred CEEEEEEEEEEEeeccCCEEecCeeEeeceEEEEEEEECCCC----------EEEEEecCC-----CCcCCCCHHHHHHH
Confidence 799999988873 2222 45799999999 99 899998653 24667788888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
+++ ++|.|+|+|+.+++.+|+.| +. . ..+.+|++|||+||||+.||.+|+|||+||| | .++++|++.
T Consensus 67 i~~-l~~~l~g~d~~~~~~~~~~l-~~---~---~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~~~~- 133 (345)
T 2zad_A 67 ENA-VREMITGIDVRNYARIFEIT-DR---L---FGFPSLKAAVQFATLDALSQELGTQVCYLLG---G-KRDEIETDK- 133 (345)
T ss_dssp HHH-HHHHHTTCBGGGHHHHHHHH-TT---C---TTSHHHHHHHHHHHHHHHHHHHTSCHHHHTT---C-CCSEEEBCE-
T ss_pred HHH-HHHHhCCCChhhHHHHHHHH-HH---h---ccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCCceeeeE-
Confidence 887 99999999999999999988 31 1 1246899999999999999999999999999 9 467888743
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
+++++ +. .+..+++.+...+||+.+| .|.|. +..++++.+ ++
T Consensus 134 -~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~----------------~~~~d~~~v-~a 175 (345)
T 2zad_A 134 -TVGID-------TV---------ENRVKEAKKIFEEGFRVIK----IKVGE----------------NLKEDIEAV-EE 175 (345)
T ss_dssp -EECSC-------CH---------HHHHHHHHHHHHTTCSEEE----EECCS----------------CHHHHHHHH-HH
T ss_pred -EecCC-------CH---------HHHHHHHHHHHHcCcCEEE----EeecC----------------CHHHHHHHH-HH
Confidence 33322 11 1234555556666776665 45431 124455555 33
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCee--EEeCCCCcCCHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIV--SIEDPFDQDDWSSWAS 348 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~--~iEdP~~~~D~~~~~~ 348 (472)
+|++| +++.|++|+ |++|+.+++++++ +.+++|++. |||||++++|++++++
T Consensus 176 vr~~g--~~~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~i~~~~iE~P~~~~~~~~~~~ 229 (345)
T 2zad_A 176 IAKVT--RGAKYIVDA-----------------------NMGYTQKEAVEFA-RAVYQKGIDIAVYEQPVRREDIEGLKF 229 (345)
T ss_dssp HHHHS--TTCEEEEEC-----------------------TTCSCHHHHHHHH-HHHHHTTCCCSEEECCSCTTCHHHHHH
T ss_pred HHhhC--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHHhcCCCeeeeeCCCCcccHHHHHH
Confidence 44444 489999999 3567889999885 568999999 9999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|+++||+++ ||||++++++++|+++|+++|++| +.|+.++.++.+++
T Consensus 230 l~~~~~ipia~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~aa~~hl 306 (345)
T 2zad_A 230 VRFHSPFPVAADES-ARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGC-MGESSLGINQSVHF 306 (345)
T ss_dssp HHHHSSSCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECC-SSCCHHHHHHHHHH
T ss_pred HHHhCCCCEEEeCC-cCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEec-CcccHHHHHHHHHH
Confidence 99999999999997 5789999999999999999999999 999999999999999999998877 47898776555555
Q ss_pred hhcCCC
Q 012041 429 GLASGQ 434 (472)
Q Consensus 429 a~~~~~ 434 (472)
+...+.
T Consensus 307 aa~~~~ 312 (345)
T 2zad_A 307 ALGTGA 312 (345)
T ss_dssp HHHHCC
T ss_pred HHcCCC
Confidence 443333
No 78
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=100.00 E-value=2.2e-45 Score=383.01 Aligned_cols=306 Identities=16% Similarity=0.178 Sum_probs=223.5
Q ss_pred ceEEEEEEEEEec-------CCC-----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQIID-------SRG-----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~~-------~~~-----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.|.. +.+ ...++|+|+|| |+ +||||+ |+++ .+...
T Consensus 28 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~G~----------~G~GE~----------~g~~---~~~~~ 84 (445)
T 3vdg_A 28 IRITGARVTPVAFADPPLLNTVGVHQPYALRAVIQLDTDAGL----------TGLGET----------YADT---VHLER 84 (445)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSC----------EEEEEE----------CCCH---HHHHH
T ss_pred CEEEEEEEEEEecCCccccccccccccceeEEEEEEEECCCC----------eEEEeC----------CChH---HHHHH
Confidence 9999999998842 111 23489999999 99 899996 2232 33444
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhc-CCC---CCCc--------cchhHHHHHHHHHHHHHHhhcCCchHHHhhhhc
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEID-GTP---NKSK--------IGANAILGVSLSVCRAGAGAKGVPLYKHIQELS 178 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~-~~~---~~~~--------~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~ 178 (472)
| +.++|.|+|+||.+++++|+.|++.. ... ..+. +...|++|||+||||+.||.+|+|||+|||
T Consensus 85 i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG--- 160 (445)
T 3vdg_A 85 L-QAAAHAIVGRSVFSTNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQVTGRPVSDLLG--- 160 (445)
T ss_dssp H-HHHHHHHTTCBTTCHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---
T ss_pred H-HHHHHHhCCCChhhHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 5 46999999999999999999998742 211 0111 234799999999999999999999999999
Q ss_pred CCCcceeeeeEEEeecCCccCCC-cccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCCC
Q 012041 179 GTKELVMPVPAFNVINGGSHAGN-NLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAPN 256 (472)
Q Consensus 179 G~~~~~vp~~~~~~~~gg~~~~~-~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~~ 256 (472)
|..++++|+..|.......+.+. ...... +..+++.++++.+...+ ||+++| .|.|. .+
T Consensus 161 G~~r~~v~~~a~~~~~~~~~~g~~~~~~~~---~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~------------~~ 221 (445)
T 3vdg_A 161 GAVRDAVPFSAYLFYKWAAHPGAEPDGWGA---ALDPDGIVAQARRMIDEYGFSAIK----LKGGV------------FA 221 (445)
T ss_dssp CCSSSEEEBCEEEECBCSSSTTSCCCSSCC---BCSHHHHHHHHHHHHHHHCCSSEE----EECSS------------SC
T ss_pred CCCCCeEEEeeeecccccccCCcccccccc---CCCHHHHHHHHHHHHHhcCCCEEE----ECCCC------------CC
Confidence 98778899855432110000000 000000 01112345555555553 777665 56542 11
Q ss_pred CCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeC
Q 012041 257 VQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIED 336 (472)
Q Consensus 257 ~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEd 336 (472)
.+.+.++++++|+++ +++.|++|+ |+.||.++|+++ .+.+++| +.||||
T Consensus 222 ~~~Di~~v~avRea~------~d~~L~vDa-----------------------N~~w~~~~Ai~~-~~~L~~~-l~~iEe 270 (445)
T 3vdg_A 222 PEEEMAAVEALRAAF------PDHPLRLDP-----------------------NAAWTPQTSVKV-AAGLEGV-LEYLED 270 (445)
T ss_dssp HHHHHHHHHHHHHHC------TTSCEEEEC-----------------------TTCSCHHHHHHH-HHHTTTT-CSEEEC
T ss_pred HHHHHHHHHHHHHhC------CCCcEEEEC-----------------------CCCCCHHHHHHH-HHHHhhH-HHeeeC
Confidence 122344444444433 478999999 467899999988 5568999 999999
Q ss_pred CCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 012041 337 PFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSG 416 (472)
Q Consensus 337 P~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~ 416 (472)
|++ |+++|++|++++++||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|.+.
T Consensus 271 P~~--~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~a~div~~d~~~~GGitea~kia~lA~~~gv~v~-~h~~~ 346 (445)
T 3vdg_A 271 PTP--GLDGMAEVAAQAPMPLATNMC-VVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICDTFGLGLS-MHSNS 346 (445)
T ss_dssp CSS--SHHHHHHHHHHCSSCEEESSS-CCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-ECCCS
T ss_pred CCC--CHHHHHHHHhcCCCCEEcCCc-CCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHHHHHHHHHHcCCEEE-EeCCc
Confidence 995 899999999999999999997 67889999999999999999999999999999999999999999975 66677
Q ss_pred CChhhHHHHHHHhh
Q 012041 417 ETEDNFIADLSVGL 430 (472)
Q Consensus 417 Et~~s~~a~lAva~ 430 (472)
|+.++.++.++++.
T Consensus 347 e~~i~~aa~~hlaa 360 (445)
T 3vdg_A 347 HLGISLAAMVHLAA 360 (445)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH
Confidence 88887665555543
No 79
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=100.00 E-value=3.6e-45 Score=381.30 Aligned_cols=310 Identities=16% Similarity=0.202 Sum_probs=224.5
Q ss_pred CceEEEEEEEEEec-------CCC--C---CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQIID-------SRG--N---PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~~-------~~~--~---~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.|.- +.+ . ..++|+|+|| |+ +||||+. +++ .+..
T Consensus 22 ~mkI~~i~~~~v~~P~~~~~~~~g~~~~~~~~~~V~v~td~G~----------~G~GE~~----------g~~---~v~~ 78 (441)
T 3vc5_A 22 SMLIREVRVTPVAFRDPPLLNAAGVHQPWALRTIVEVVTDEGI----------TGLGETY----------GDL---AHLE 78 (441)
T ss_dssp -CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTCC----------EEEEEEE----------CCH---HHHH
T ss_pred CcEEEEEEEEEEecCCcccccccCccccceeEEEEEEEECCCC----------EEEEeCC----------ChH---HHHH
Confidence 49999999998842 111 2 2489999999 99 8999973 222 3344
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhc-CCC---CCC--c------cchhHHHHHHHHHHHHHHhhcCCchHHHhhhh
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEID-GTP---NKS--K------IGANAILGVSLSVCRAGAGAKGVPLYKHIQEL 177 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~-~~~---~~~--~------~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~ 177 (472)
.| +.++|.|+|+||.+++++|+.|++.. ... ..+ + +...|++|||+||||+.||.+|+|||+|||
T Consensus 79 ~i-~~l~p~LiG~d~~~~e~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG-- 155 (441)
T 3vc5_A 79 QV-RAAAARLPGLDVYALHRIYRRVADVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLG-- 155 (441)
T ss_dssp HH-HHHHHTCTTSBTTCHHHHHHHHHHHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT--
T ss_pred HH-HHHHHHhCCCChhHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 45 46999999999999999999998732 111 001 1 223699999999999999999999999999
Q ss_pred cCCCcceeeeeEEEeecCCccCCC-cccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCC
Q 012041 178 SGTKELVMPVPAFNVINGGSHAGN-NLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAP 255 (472)
Q Consensus 178 ~G~~~~~vp~~~~~~~~gg~~~~~-~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~ 255 (472)
|..++++|+..|.......+.+. ...... +..+++.++++.+...+ ||+++| .|.|. .
T Consensus 156 -G~~rd~v~~~a~~~~~~~~~~g~~~~~~~~---~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~------------~ 215 (441)
T 3vc5_A 156 -GKVRDAVPYSAYLFYKWAGHPGKPEDRFGP---ALDPDGIVAQARLLIGEYGFRSIK----LKGGV------------F 215 (441)
T ss_dssp -CCSSSEEEBCEEEECBCSBCTTSCBCTTCC---BCSHHHHHHHHHHHHHHHCCSSEE----EECSS------------S
T ss_pred -CCCCCeEEEEEeeccccccCCCcccccccc---CCCHHHHHHHHHHHHHhcCCCEEE----EccCC------------C
Confidence 98788899855532110000000 000000 01112345555555543 777665 56542 1
Q ss_pred CCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEe
Q 012041 256 NVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIE 335 (472)
Q Consensus 256 ~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iE 335 (472)
+.+.+.++++++|+++ +++.|++|+ |+.||.++|+++ .+.+++| +.|||
T Consensus 216 ~~~~Di~rv~avRea~------pd~~L~vDa-----------------------N~~w~~~~Ai~~-~~~L~~~-l~~iE 264 (441)
T 3vc5_A 216 PPEQEAEAIQALRDAF------PGLPLRLDP-----------------------NAAWTVETSIRV-GRALDGV-LEYLE 264 (441)
T ss_dssp CHHHHHHHHHHHHHHS------TTCCEEEEC-----------------------TTCSCHHHHHHH-HHHTTTT-CSEEE
T ss_pred CHHHHHHHHHHHHHhC------CCCcEeccC-----------------------CCCCCHHHHHHH-HHHHHHH-HHHhh
Confidence 1122344444444443 478999999 467899999988 5568999 99999
Q ss_pred CCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 012041 336 DPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRS 415 (472)
Q Consensus 336 dP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~ 415 (472)
||++ |+++|++|++++++||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|.+
T Consensus 265 eP~~--~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia~lA~~~gv~v~-~h~~ 340 (441)
T 3vc5_A 265 DPTP--GIDGMARVAAEVPMPLATNMC-VVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCATFGIELS-MHSN 340 (441)
T ss_dssp CCSS--SHHHHHHHHTTSSSCEEESSS-CCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEE-ECCC
T ss_pred ccCC--CHHHHHHHHhcCCCCEEeCCC-CCCHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHHHHHHHcCCEEE-ecCC
Confidence 9995 899999999999999999997 67889999999999999999999999999999999999999999975 5657
Q ss_pred CCChhhHHHHHHHhhcCC
Q 012041 416 GETEDNFIADLSVGLASG 433 (472)
Q Consensus 416 ~Et~~s~~a~lAva~~~~ 433 (472)
.|+.++.++.++++...+
T Consensus 341 ~e~~i~~aa~~hlaaa~p 358 (441)
T 3vc5_A 341 SHLGISLAAMTHLAAATP 358 (441)
T ss_dssp SCCHHHHHHHHHHHHTCT
T ss_pred cccHHHHHHHHHHHHhCC
Confidence 788887666555544333
No 80
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=100.00 E-value=5.2e-45 Score=379.95 Aligned_cols=299 Identities=16% Similarity=0.224 Sum_probs=232.2
Q ss_pred ceEEEEEEEEEe--------cCCCC------CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQII--------DSRGN------PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~~------~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+++.+. ++.+. ++++|+|+|| |+ +||||+.+ +++.+++.
T Consensus 39 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~v~V~v~td~G~----------~G~GE~~~----------g~~~~~~~ 98 (428)
T 3bjs_A 39 MKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGI----------TGYGEAHP----------GRSPGAIT 98 (428)
T ss_dssp CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSC----------EEEEEECC----------TTCHHHHH
T ss_pred CEEeEEEEEEEecccCCcccccccccccccccEEEEEEEECCCC----------EEEEEecC----------CCCHHHHH
Confidence 999999999882 34443 6799999999 98 89999842 34466777
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCC-CccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNK-SKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPV 187 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~-~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~ 187 (472)
..|++.++|.|+|+||.+++.+|+.|.+....+.+ .++..+|++||||||||+.||.+|+|||+||| |. ++++|+
T Consensus 99 ~~i~~~l~p~liG~d~~~~~~i~~~l~~~~~~~~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~-~~~vp~ 174 (428)
T 3bjs_A 99 SLIHNTIAPMLIGMKATDCVGAWQRVHRMQLSSHGLGAGAALAISGIDMALWDIRGKAANMPLYELLG---GS-KRRIPA 174 (428)
T ss_dssp HHHHHTTTTTTTTSBTTCHHHHHHHHHHHTTTTTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CC-CCCEEE
T ss_pred HHHHHHHHHHhCCCCccCHHHHHHHHHHhhhhccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC-CCceee
Confidence 77888899999999999999999999652110111 12346899999999999999999999999999 97 556665
Q ss_pred eEEEeecCCccCCCcccccceeeccCC-cccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHH
Q 012041 188 PAFNVINGGSHAGNNLAMQEFMILPVG-ATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVL 266 (472)
Q Consensus 188 ~~~~~~~gg~~~~~~l~~~e~~~~p~~-~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~ 266 (472)
|++ |..+. ..+ +..++++.+...+||+.+| .|.|. +++.+.+.+++
T Consensus 175 --~~s--g~~~~------------~~~~e~~~~~a~~~~~~Gf~~vK----ik~g~-------------~~~~d~e~v~a 221 (428)
T 3bjs_A 175 --YAG--GIALG------------YQPKESLAEEAQEYIARGYKALK----LRIGD-------------AARVDIERVRH 221 (428)
T ss_dssp --EEE--SSCSC------------SCCHHHHHHHHHHHHHHTCSEEE----EECCS-------------CHHHHHHHHHH
T ss_pred --eee--ccccC------------CChHHHHHHHHHHHHHCCCCEEE----ECCCC-------------CHHHHHHHHHH
Confidence 654 22111 111 2234566666667776665 45441 12223455555
Q ss_pred HHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHH
Q 012041 267 LTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSW 346 (472)
Q Consensus 267 v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~ 346 (472)
||+++ | .++.|++|+ |++||.+++++++ +.+++|++.|||||++++|++++
T Consensus 222 vR~av---G--~d~~l~vDa-----------------------n~~~~~~eai~~~-~~L~~~~i~~iEqP~~~~d~~~~ 272 (428)
T 3bjs_A 222 VRKVL---G--DEVDILTDA-----------------------NTAYTMADARRVL-PVLAEIQAGWLEEPFACNDFASY 272 (428)
T ss_dssp HHHHH---C--TTSEEEEEC-----------------------TTCCCHHHHHHHH-HHHHHTTCSCEECCSCTTCHHHH
T ss_pred HHHhc---C--CCCEEEEEC-----------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCccCHHHH
Confidence 55554 3 279999999 3567889999885 56899999999999999999999
Q ss_pred HHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHH--
Q 012041 347 ASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFI-- 423 (472)
Q Consensus 347 ~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~-- 423 (472)
++|+++++ +||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++| .| +.|++++.+
T Consensus 273 ~~l~~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~~gi~~~-~~-~~es~i~~~a~ 349 (428)
T 3bjs_A 273 REVAKITPLVPIAAGEN-HYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAYRIPIN-AH-SSATGLNHAAT 349 (428)
T ss_dssp HHHTTTCSSSCEEECTT-CCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCCBC-CB-CCSSHHHHHHH
T ss_pred HHHHHhCCCCcEEcCCC-cCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEE-ec-CCCcHHHHHHH
Confidence 99999999 99999997 56799999999999999999999999999999999999999999986 45 689988765
Q ss_pred HHHHHhhc
Q 012041 424 ADLSVGLA 431 (472)
Q Consensus 424 a~lAva~~ 431 (472)
+||++++.
T Consensus 350 ~hlaaa~~ 357 (428)
T 3bjs_A 350 IHFLAATE 357 (428)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 56655554
No 81
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=100.00 E-value=1.8e-45 Score=378.82 Aligned_cols=298 Identities=16% Similarity=0.150 Sum_probs=225.1
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+. ++.+ ++.++|+|+|| |+ +||||+.++ .. +...+..
T Consensus 27 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~----------~G~GE~~~~--------~~-~~~~~~~ 87 (390)
T 3ugv_A 27 TLTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIETEEGV----------PGRAYLEPY--------VP-KAMKYLV 87 (390)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------CEEEEECCS--------CG-GGHHHHH
T ss_pred CCEEEEEEEEEEEecCCCCccCcccccccceEEEEEEEECCCC----------EEEEEeecC--------CC-chHHHHH
Confidence 3999999998873 2333 35699999999 99 899998542 22 1234555
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.+.+.++|.|+|+|+.++ ++|+.|.+.......+++..+|++|||+||||+.||.+|+|||+||| |.. +++|+
T Consensus 88 ~~~~~l~p~liG~d~~~~-~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~v~~-- 160 (390)
T 3ugv_A 88 PALHDMSDMLAGQPLAPA-EIYDKTRKSLHFVGYAGLSMIAASGVDMAVWDALARAANMPLCTLLG---GTP-GSVKA-- 160 (390)
T ss_dssp HHHHHHHHHHTTSBCCHH-HHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCC-CEEEE--
T ss_pred HHHHHHHHHHCCCCcchH-HHHHHHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCC-CceEE--
Confidence 677789999999999999 99999976321111122335799999999999999999999999999 875 56765
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH---HHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSE---VYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVL 266 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~---~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~ 266 (472)
|+++++ +.. ..+++..+++.+...+ ||+++| .|+|. .+.+.+.+.+++
T Consensus 161 y~s~g~-~~~------------~~~e~~~~~a~~~~~~~~~G~~~iK----lKvG~------------~~~~~d~~~v~a 211 (390)
T 3ugv_A 161 YNSNGL-WLK------------SPAEVAAEAVELKAEGQGTGFKGLK----LRMGR------------DDPAVDIETAEA 211 (390)
T ss_dssp EECSCC-CSS------------CHHHHHHHHHHHHHTTCTTCCSEEE----EECCC------------SSHHHHHHHHHH
T ss_pred EEeccc-ccC------------CCHHHHHHHHHHHHHhhhCCCcEEE----EecCC------------CCHHHHHHHHHH
Confidence 655422 100 0112334556566666 776664 56552 122334455555
Q ss_pred HHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHH
Q 012041 267 LTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSW 346 (472)
Q Consensus 267 v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~ 346 (472)
+|+++ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++++
T Consensus 212 vR~a~---G--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~~~~ 262 (390)
T 3ugv_A 212 VWDAV---G--RDTALMVDF-----------------------NQGLDMAEAMHR-TRQIDDLGLEWIEEPVVYDNFDGY 262 (390)
T ss_dssp HHHHH---C--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHTTSCCSEEECCSCTTCHHHH
T ss_pred HHHHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEEECCCCcccHHHH
Confidence 55554 3 289999999 466889999988 556899999999999999999999
Q ss_pred HHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHH
Q 012041 347 ASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADL 426 (472)
Q Consensus 347 ~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~l 426 (472)
++|++++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +. ...+|+
T Consensus 263 ~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~-~~----~a~lhl 336 (390)
T 3ugv_A 263 AQLRHDLKTPLMIGEN-FYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHL-YP----EVGAHV 336 (390)
T ss_dssp HHHHHHCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBS-CH----HHHHHH
T ss_pred HHHHHhcCCCEEeCCC-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecC-HH----HHHHHH
Confidence 9999999999999997 67899999999999999999999999999999999999999999986544 32 345666
Q ss_pred HHhh
Q 012041 427 SVGL 430 (472)
Q Consensus 427 Ava~ 430 (472)
+.++
T Consensus 337 ~aa~ 340 (390)
T 3ugv_A 337 MRVT 340 (390)
T ss_dssp HTTC
T ss_pred HHhC
Confidence 6554
No 82
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=100.00 E-value=1.8e-45 Score=380.33 Aligned_cols=299 Identities=16% Similarity=0.233 Sum_probs=227.1
Q ss_pred ceEEEEEEEEEec--------CC----------CCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchH
Q 012041 44 AKVKSVKARQIID--------SR----------GNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGV 104 (472)
Q Consensus 44 m~I~~V~~~~v~~--------~~----------~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~ 104 (472)
|||++|+++.+.. +. .+++|+|+|+|| |+ +||||+.. . .+.++
T Consensus 26 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~----------~G~GE~~~-~-----~~~~~-- 87 (398)
T 2pp0_A 26 DRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGF----------EGVGFSYS-K-----RAGGQ-- 87 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSC----------EEEEEEEE-S-----STTHH--
T ss_pred CeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCC----------EEEEEecC-c-----cchHH--
Confidence 9999999988831 10 145799999999 99 89999832 1 13332
Q ss_pred HHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcce
Q 012041 105 LNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELV 184 (472)
Q Consensus 105 ~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~ 184 (472)
.+...+ +.++|.|+|+||.+++.+|+.|.+.....+.++++.+|++||||||||+.||.+|+|||+||| |. +++
T Consensus 88 -~~~~~~-~~l~p~l~G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~-~~~ 161 (398)
T 2pp0_A 88 -GIYAHA-KEIADNLLGEDPNDIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLG---AH-RDS 161 (398)
T ss_dssp -HHHHHH-HHHGGGGTTSCTTCHHHHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHC---CS-CSE
T ss_pred -HHHHHH-HHHHHHHcCCCchhHHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCC
Confidence 222334 469999999999999999999987543222234556899999999999999999999999999 87 455
Q ss_pred eeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHH
Q 012041 185 MPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGL 264 (472)
Q Consensus 185 vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l 264 (472)
+| +|+++ |+.+. .+. .+..+++.+...+||+.+| .|.|. ++++.+.+.+
T Consensus 162 vp--~y~~~-g~~~~---~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~~~d~e~v 210 (398)
T 2pp0_A 162 VQ--CYNTS-GGFLH---TPL---------DQVLKNVVISRENGIGGIK----LKVGQ------------PNCAEDIRRL 210 (398)
T ss_dssp EE--EEECT-TSCTT---SCH---------HHHHHHHHHHHHTTCSCEE----EECCC------------SCHHHHHHHH
T ss_pred ee--EEEec-CCcCC---CCH---------HHHHHHHHHHHHhCCCeEE----EecCC------------CCHHHHHHHH
Confidence 65 47654 22210 112 2234566666666776665 45441 1223345556
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHH
Q 012041 265 VLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWS 344 (472)
Q Consensus 265 ~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~ 344 (472)
+.||+++ | +++.|++|+ |++|+.+++++++ +.+++|++.|||||++++|++
T Consensus 211 ~avR~av---G--~d~~l~vDa-----------------------n~~~~~~~ai~~~-~~l~~~~i~~iEqP~~~~d~~ 261 (398)
T 2pp0_A 211 TAVREAL---G--DEFPLMVDA-----------------------NQQWDRETAIRMG-RKMEQFNLIWIEEPLDAYDIE 261 (398)
T ss_dssp HHHHHHH---C--SSSCEEEEC-----------------------TTCSCHHHHHHHH-HHHGGGTCSCEECCSCTTCHH
T ss_pred HHHHHHc---C--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHHHcCCceeeCCCChhhHH
Confidence 6666555 3 279999999 3567889999885 558999999999999999999
Q ss_pred HHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHH
Q 012041 345 SWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIA 424 (472)
Q Consensus 345 ~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a 424 (472)
++++|++++++||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++| +|.++| ..+
T Consensus 262 ~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~-~h~~~~----~~~ 335 (398)
T 2pp0_A 262 GHAQLAAALDTPIATGEM-LTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLA-PHFAME----VHL 335 (398)
T ss_dssp HHHHHHHHCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCSCHH----HHH
T ss_pred HHHHHHhhCCCCEEecCC-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEe-ecCccH----HHH
Confidence 999999999999999997 56899999999999999999999999999999999999999999985 675544 367
Q ss_pred HHHHhhcC
Q 012041 425 DLSVGLAS 432 (472)
Q Consensus 425 ~lAva~~~ 432 (472)
||++++..
T Consensus 336 ~laaa~~~ 343 (398)
T 2pp0_A 336 HLSAAYPL 343 (398)
T ss_dssp HHHHTCSS
T ss_pred HHHhcCCC
Confidence 88887643
No 83
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=100.00 E-value=9.3e-45 Score=373.15 Aligned_cols=297 Identities=14% Similarity=0.173 Sum_probs=230.4
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+. .+.+ +++++|+|+|| |+ +||||+. +++ .++..
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~----------g~~--~~~~~ 60 (382)
T 2gdq_A 3 LVKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGI----------DGWGECV----------DWL--PALHV 60 (382)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEEC----------SCH--HHHHH
T ss_pred CCEEEEEEEEEEecccCcccccccceeccCcEEEEEEEECCCC----------EEEEeec----------Cch--HHHHH
Confidence 3999999998873 2222 45799999999 98 8999974 111 14566
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.|++.++|.|+|+||.+++.+|+.|.+. ..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 61 ~i~~~l~~~l~G~d~~~~~~~~~~l~~~---------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~vp~-- 126 (382)
T 2gdq_A 61 GFTKRIIPFLLGKQAGSRLSLVRTIQKW---------HQRAASAVSMALTEIAAKAADCSVCELWG---GRYREEIPV-- 126 (382)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHHHH---------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCSCSEEEE--
T ss_pred HHHHHHHHHhcCCCcccHHHHHHHHHHH---------HhHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCceeE--
Confidence 6777899999999999999999999753 15799999999999999999999999999 976667776
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
|++++++ + +..+++ +...+++.+...+||+.+| .|.|. .+++.+.+.++++|+
T Consensus 127 ~~~~g~~-~-~~~~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~~~d~e~v~avR~ 179 (382)
T 2gdq_A 127 YASFQSY-S-DSPQWI---------SRSVSNVEAQLKKGFEQIK----VKIGG------------TSFKEDVRHINALQH 179 (382)
T ss_dssp EEECCCB-C-SSTTHH---------HHHHHHHHHHHTTTCCEEE----EECSS------------SCHHHHHHHHHHHHH
T ss_pred EEEeccc-C-CCcccH---------HHHHHHHHHHHHcCCCEEE----EcCCC------------CCHHHHHHHHHHHHH
Confidence 5443211 1 010111 1223455555555676554 45431 122333455555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhC-CeeEEeCCCCcCCHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDF-PIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~-~l~~iEdP~~~~D~~~~~~ 348 (472)
++ | +++.|++|+ |++||.+++++++ +.++++ ++.|||||++++|++++++
T Consensus 180 a~---G--~d~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~~i~~iEqP~~~~d~~~~~~ 230 (382)
T 2gdq_A 180 TA---G--SSITMILDA-----------------------NQSYDAAAAFKWE-RYFSEWTNIGWLEEPLPFDQPQDYAM 230 (382)
T ss_dssp HH---C--TTSEEEEEC-----------------------TTCCCHHHHHTTH-HHHTTCSCEEEEECCSCSSCHHHHHH
T ss_pred hh---C--CCCEEEEEC-----------------------CCCCCHHHHHHHH-HHHhhccCCeEEECCCCcccHHHHHH
Confidence 55 3 279999999 3567889999884 568999 9999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++| .| +.|++++.++++++
T Consensus 231 l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~-~~-~~es~i~~~a~l~l 307 (382)
T 2gdq_A 231 LRSRLSVPVAGGEN-MKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRAS-AH-AYDGSLSRLYALFA 307 (382)
T ss_dssp HHTTCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEEC-CC-CSSCSHHHHHHHHH
T ss_pred HHhhCCCCEEecCC-cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEe-ec-CCCcHHHHHHHHHH
Confidence 99999999999997 57799999999999999999999999999999999999999999985 55 68999888888877
Q ss_pred hhcCCC
Q 012041 429 GLASGQ 434 (472)
Q Consensus 429 a~~~~~ 434 (472)
+...+.
T Consensus 308 aa~~~~ 313 (382)
T 2gdq_A 308 QACLPP 313 (382)
T ss_dssp HHTSCC
T ss_pred HHhCch
Confidence 765554
No 84
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=100.00 E-value=7.5e-45 Score=373.06 Aligned_cols=299 Identities=17% Similarity=0.170 Sum_probs=234.1
Q ss_pred ceEEEEEEEEEec--------CCC----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHH
Q 012041 44 AKVKSVKARQIID--------SRG----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNI 111 (472)
Q Consensus 44 m~I~~V~~~~v~~--------~~~----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i 111 (472)
|||++|+++.+.. +.+ +++++|+|+|||+ +||||+.+.+. ++|.+++++++...+
T Consensus 8 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~tdG~----------~G~GE~~~~~~---~~~~~e~~~~~~~~i 74 (375)
T 1r0m_A 8 FKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHGEGV----------QGVAEGTMEAR---PMYREETIAGALDLL 74 (375)
T ss_dssp EECCEEEEEEEEEEBC----------CEEEEEEEEEEETTE----------EEEEECCCBSS---SSSSSCBHHHHHHHH
T ss_pred cEEEEEEEEEEeeecCCCeEecceEEeeccEEEEEEEECCe----------EEEEEEecCCC---CcccCCCHHHHHHHH
Confidence 9999999988731 222 3579999999988 89999865422 368889988888889
Q ss_pred HHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEE
Q 012041 112 NDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFN 191 (472)
Q Consensus 112 ~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 191 (472)
++.++|.|+|+|+.+++.+|+.|..+. + +.+|++|||+||||+.||..|+|||+||| |.. ..+|++ |+
T Consensus 75 ~~~l~~~l~g~d~~~~~~l~~~~~~~~-----g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~-~~~~~~-~~ 142 (375)
T 1r0m_A 75 RGTFLPAILGQTFANPEAVSDALGSYR-----G--NRMARAMVEMAAWDLWARTLGVPLGTLLG---GHK-EQVEVG-VS 142 (375)
T ss_dssp HHTHHHHHTTCEESSHHHHHHTTTTSC-----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHHT---CCC-SEEEBC-EE
T ss_pred HHHHHHHHcCCCcCCHHHHHHHHHHcc-----C--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cceeee-EE
Confidence 889999999999999999887664321 1 35799999999999999999999999999 974 457764 44
Q ss_pred eecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 012041 192 VINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAI 271 (472)
Q Consensus 192 ~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av 271 (472)
+ |.+. +. .+..+++.+...+||+.+| .|.| + +.+.+.++++|+++
T Consensus 143 ~---g~~~----~~---------~~~~~~a~~~~~~G~~~iK----ik~~-------------~--~~d~~~v~avr~a~ 187 (375)
T 1r0m_A 143 L---GIQA----DE---------QATVDLVRRHVEQGYRRIK----LKIK-------------P--GWDVQPVRATREAF 187 (375)
T ss_dssp E---CCCS----SH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHHHHHHHHHHC
T ss_pred e---cCCC----CH---------HHHHHHHHHHHHhcccEEE----EecC-------------h--HHHHHHHHHHHHHc
Confidence 2 2110 11 1234555555566676554 3421 1 22456666666554
Q ss_pred HHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHh
Q 012041 272 EKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQS 351 (472)
Q Consensus 272 ~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~ 351 (472)
+++.|++|+| ++|+.++ +++ .+.+++|++.|||||++++|+++|++|++
T Consensus 188 ------~~~~l~vDan-----------------------~~~~~~~-~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~~ 236 (375)
T 1r0m_A 188 ------PDIRLTVDAN-----------------------SAYTLAD-AGR-LRQLDEYDLTYIEQPLAWDDLVDHAELAR 236 (375)
T ss_dssp ------TTSCEEEECT-----------------------TCCCGGG-HHH-HHTTGGGCCSCEECCSCTTCSHHHHHHHH
T ss_pred ------CCCeEEEeCC-----------------------CCCCHHH-HHH-HHHHHhCCCcEEECCCCcccHHHHHHHHH
Confidence 4788999993 4567778 877 45689999999999999999999999999
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+ .|+.++.++.++++ .
T Consensus 237 ~~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~aa~~hla-a 313 (375)
T 1r0m_A 237 RIRTPLCLDES-VASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGM-LESGIGRAHNIHLS-T 313 (375)
T ss_dssp HCSSCEEESTT-CCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC-CCCHHHHHHHHHHT-T
T ss_pred hCCCCEEecCc-cCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCc-cccHHHHHHHHHHH-c
Confidence 99999999997 688999999999999999999999999999999999999999999999995 58888876666666 4
Q ss_pred CCCcc
Q 012041 432 SGQIK 436 (472)
Q Consensus 432 ~~~i~ 436 (472)
.+...
T Consensus 314 ~~~~~ 318 (375)
T 1r0m_A 314 LSNFR 318 (375)
T ss_dssp STTBC
T ss_pred CCCCC
Confidence 44433
No 85
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.9e-44 Score=371.04 Aligned_cols=305 Identities=19% Similarity=0.210 Sum_probs=229.5
Q ss_pred ceEEEEEEEEEec-----------C-CC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHH
Q 012041 44 AKVKSVKARQIID-----------S-RG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLN 106 (472)
Q Consensus 44 m~I~~V~~~~v~~-----------~-~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~ 106 (472)
|||++|+++.+.. + .+ +++++|+|+|| |+ +||||+. +++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~-----------~~~~-- 57 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQ----------EGHSFTA-----------PEIV-- 57 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSC----------EEEEEEC-----------GGGG--
T ss_pred CeEeEEEEEEEecCCCCcccccccccccccccceEEEEEEEECCCC----------EEEEEec-----------CchH--
Confidence 8999999987731 1 11 34689999999 99 8999974 1111
Q ss_pred HHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceee
Q 012041 107 AVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMP 186 (472)
Q Consensus 107 a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp 186 (472)
+...|++.++|.|+|+||.+++.+|+.|.+... +.++++..+|++||||||||+.||.+|+|||+||| |. ++++|
T Consensus 58 ~~~~i~~~l~~~l~g~d~~~~~~~~~~l~~~~~-~~g~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~-~~~vp 132 (382)
T 1rvk_A 58 RPHVIEKFVKKVLIGEDHRDRERLWQDLAHWQR-GSAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIG---GY-RDKVL 132 (382)
T ss_dssp CHHHHHHTHHHHHTTSBTTCHHHHHHHHHHHHT-TTTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHC---CS-CSEEE
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhh-cccchHHHHHHHHHHHHHHHHhHhHhCCCHHHHhC---CC-CCcce
Confidence 445577789999999999999999999964211 11133457899999999999999999999999999 97 56777
Q ss_pred eeEEEeec-CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHH
Q 012041 187 VPAFNVIN-GGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLV 265 (472)
Q Consensus 187 ~~~~~~~~-gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~ 265 (472)
+ |+.+. |+.|.+... ...+..+++.+...+||+.+| .|.|... +++.++++.+.+.++
T Consensus 133 ~--~~~~~~g~~~~~~~~---------~~e~~~~~a~~~~~~Gf~~iK----ik~g~~~------~~~~~~~~~~~e~v~ 191 (382)
T 1rvk_A 133 A--YGSIMCGDELEGGLA---------TPEDYGRFAETLVKRGYKGIK----LHTWMPP------VSWAPDVKMDLKACA 191 (382)
T ss_dssp E--EEEECCCCCCTTTTS---------SHHHHHHHHHHHHHHTCSEEE----EECCCTT------STTCCCHHHHHHHHH
T ss_pred e--cEEeccCccccccCC---------CHHHHHHHHHHHHHCCCCEEE----EcCCcCc------cccccchHHHHHHHH
Confidence 6 54333 332321111 112345566666667787665 5655311 111223333344455
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHH
Q 012041 266 LLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSS 345 (472)
Q Consensus 266 ~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~ 345 (472)
++|+++ | .++.|++|+ |++||.++++++ .+.++++++.|||||++++|+++
T Consensus 192 avr~a~---g--~d~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iE~P~~~~~~~~ 242 (382)
T 1rvk_A 192 AVREAV---G--PDIRLMIDA-----------------------FHWYSRTDALAL-GRGLEKLGFDWIEEPMDEQSLSS 242 (382)
T ss_dssp HHHHHH---C--TTSEEEEEC-----------------------CTTCCHHHHHHH-HHHHHTTTCSEEECCSCTTCHHH
T ss_pred HHHHHh---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEeCCCChhhHHH
Confidence 555544 3 289999999 356788999988 46789999999999999999999
Q ss_pred HHHHHhhcCCeEEeCCccccC-HHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHH
Q 012041 346 WASLQSSVDIQLVGDDLLVTN-PKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIA 424 (472)
Q Consensus 346 ~~~L~~~~~~pI~~dE~~~~~-~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a 424 (472)
+++|++++++||++||+ +.+ +++++++++.+++|+++||++++||||++++++++|+++|+++|+ | +.|+. ++
T Consensus 243 ~~~l~~~~~iPIa~dE~-~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~-~-~~~~~---~~ 316 (382)
T 1rvk_A 243 YKWLSDNLDIPVVGPES-AAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEV-H-GNTAM---NL 316 (382)
T ss_dssp HHHHHHHCSSCEEECSS-CSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE-C-CCSHH---HH
T ss_pred HHHHHhhCCCCEEEeCC-ccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEee-c-CCCCH---HH
Confidence 99999999999999997 566 999999999999999999999999999999999999999999865 4 56765 78
Q ss_pred HHHHhhcC
Q 012041 425 DLSVGLAS 432 (472)
Q Consensus 425 ~lAva~~~ 432 (472)
|+++++..
T Consensus 317 ~laaa~~~ 324 (382)
T 1rvk_A 317 HVVAATKN 324 (382)
T ss_dssp HHHHHCSS
T ss_pred HHHHhCCc
Confidence 99888754
No 86
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=100.00 E-value=1.5e-44 Score=371.18 Aligned_cols=298 Identities=17% Similarity=0.210 Sum_probs=230.3
Q ss_pred ceEEEEEEEEEe--------cCCCC------CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQII--------DSRGN------PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~~------~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+++.+. .+.+. ++++|+|+|| |+ +||||+.++ . ++|.++++.++.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-~---~~~~~~~~~~~~ 68 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGV----------TGWGEGCPW-G---HSYLPAHGPGLR 68 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSC----------EEEEEECCS-T---TTSSSCCHHHHH
T ss_pred CEEEEEEEEEEeccccCceecccCcccccccceEEEEEEECCCC----------EEEEEEecC-C---CCcCCCCHHHHH
Confidence 899999998772 23332 4699999999 98 899998754 1 368888888888
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
..|+ .++|.|+|+||.+++.+|+.|.... .+ ..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 69 ~~l~-~l~~~l~g~d~~~~~~~~~~l~~~~----~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~~- 137 (378)
T 2qdd_A 69 AGIA-TLAPHLLGLDPRSLDHVNRVMDLQL----PG--HSYVKSPIDMACWDILGQVAGLPLWQLLG---GEAATPVPI- 137 (378)
T ss_dssp HHHH-HHHHHHTTCCTTCHHHHHHHHHHHS----CS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSSCCCEEB-
T ss_pred HHHH-HHHHHHCCCCccCHHHHHHHHHHhh----cc--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCCCce-
Confidence 8888 8999999999999999999995421 11 46899999999999999999999999999 976667776
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|.+++.+ +. +...+++.+...+||+.+| .|.|. +++ ...++.++
T Consensus 138 -~~~~~~~-------~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~---~~~~e~v~ 181 (378)
T 2qdd_A 138 -NSSISTG-------TP---------DQMLGLIAEAAAQGYRTHS----AKIGG------------SDP---AQDIARIE 181 (378)
T ss_dssp -EEEECSC-------CH---------HHHHHHHHHHHHHTCCEEE----EECCS------------SCH---HHHHHHHH
T ss_pred -EEEecCC-------CH---------HHHHHHHHHHHHHhhhhee----ecCCC------------CCh---HHHHHHHH
Confidence 5444211 11 1234555556666776654 45441 112 33344443
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
...+..| .++.|++|+ |++||.+++++++ +.++ |++ |||||++ |++++++
T Consensus 182 avr~a~g--~~~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~-~~i-~iEqP~~--d~~~~~~ 231 (378)
T 2qdd_A 182 AISAGLP--DGHRVTFDV-----------------------NRAWTPAIAVEVL-NSVR-ARD-WIEQPCQ--TLDQCAH 231 (378)
T ss_dssp HHHHSCC--TTCEEEEEC-----------------------TTCCCHHHHHHHH-TSCC-CCC-EEECCSS--SHHHHHH
T ss_pred HHHHHhC--CCCEEEEeC-----------------------CCCCCHHHHHHHH-HHhC-CCc-EEEcCCC--CHHHHHH
Confidence 3333333 279999999 3567889999885 5578 999 9999998 9999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|+++|+++ +.|+.++.++.+++
T Consensus 232 l~~~~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~-~~es~i~~aa~~hl 309 (378)
T 2qdd_A 232 VARRVANPIMLDEC-LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED-VGGTALADTAALHL 309 (378)
T ss_dssp HHTTCCSCEEECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHHHHHH
T ss_pred HHHhCCCCEEECCC-cCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC-CCCcHHHHHHHHHH
Confidence 99999999999997 56799999999999999999999999999999999999999999987665 57998876655555
Q ss_pred hhcCCC
Q 012041 429 GLASGQ 434 (472)
Q Consensus 429 a~~~~~ 434 (472)
+...+.
T Consensus 310 aaa~~~ 315 (378)
T 2qdd_A 310 AASTPE 315 (378)
T ss_dssp HHTSCT
T ss_pred HHcCCC
Confidence 544443
No 87
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=100.00 E-value=7.8e-45 Score=372.18 Aligned_cols=299 Identities=18% Similarity=0.227 Sum_probs=235.3
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNI 111 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i 111 (472)
|||++|+++.+. .+.+ +++++|+|+|||+ +||||+.+++. |+|.+++++++...+
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~tdG~----------~G~GE~~~~~~---~~~~~e~~~~~~~~i 67 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFGEGL----------EGLGEGVMERL---PLYREETVAGARYLL 67 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTE----------EEEEECCCBSS---CSSSSCBHHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEEeeCcEEEEEEEECCe----------EEEEEeccCCC---CcccCCCHHHHHHHH
Confidence 899999988773 1222 4579999999988 89999865432 368889988888889
Q ss_pred HHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEE
Q 012041 112 NDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFN 191 (472)
Q Consensus 112 ~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 191 (472)
++.++|.|+|+|+.+++.+|+.|..+. + +.+|++|||+||||+.||.+|+|||+||| |.. ..+|++ |+
T Consensus 68 ~~~l~~~l~G~d~~~~~~l~~~~~~~~-----g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~-~~~~~~-~~ 135 (369)
T 2zc8_A 68 EEVFLPRVLGRDLPNPEALREALAPFR-----G--NPMAKAVLEMAFFDLWAKALGRPLWQVLG---GVR-QAVEVG-VS 135 (369)
T ss_dssp HHTHHHHHTTCBCSSHHHHHHHHTTSC-----S--CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCC-SEEEBC-EE
T ss_pred HHHHHHHHcCCCcCCHHHHHHHHHHhc-----C--ChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cceece-EE
Confidence 888999999999999999998875321 1 35799999999999999999999999999 974 456764 44
Q ss_pred eecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 012041 192 VINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAI 271 (472)
Q Consensus 192 ~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av 271 (472)
+ |.+. +. .+.++++.+...+||+.+| .|.| + +.+.+.++++|+++
T Consensus 136 ~---g~~~----~~---------~~~~~~a~~~~~~G~~~iK----ik~~-------------~--~~d~~~v~avr~a~ 180 (369)
T 2zc8_A 136 L---GIQP----SV---------EDTLRVVERHLEEGYRRIK----LKIK-------------P--GWDYEVLKAVREAF 180 (369)
T ss_dssp E---CCCS----SH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHHHHHHHHHHC
T ss_pred e---cCCC----CH---------HHHHHHHHHHHHhhhheee----eecC-------------h--hHHHHHHHHHHHHc
Confidence 2 2110 11 1234555555566676554 3421 1 22456666666554
Q ss_pred HHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHh
Q 012041 272 EKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQS 351 (472)
Q Consensus 272 ~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~ 351 (472)
+++.|++|+| ++|+.++ +++ .+.+++|++.|||||++++|+++|++|++
T Consensus 181 ------~~~~l~vDan-----------------------~~~~~~~-~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~~ 229 (369)
T 2zc8_A 181 ------PEATLTADAN-----------------------SAYSLAN-LAQ-LKRLDELRLDYIEQPLAYDDLLDHAKLQR 229 (369)
T ss_dssp ------TTSCEEEECT-----------------------TCCCGGG-HHH-HHGGGGGCCSCEECCSCTTCSHHHHHHHH
T ss_pred ------CCCeEEEecC-----------------------CCCCHHH-HHH-HHHHHhCCCcEEECCCCcccHHHHHHHHh
Confidence 4788999993 4567778 877 56689999999999999999999999999
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
++++||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+ .|+.++.++.++++ .
T Consensus 230 ~~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~aa~~hla-a 306 (369)
T 2zc8_A 230 ELSTPICLDES-LTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGM-LEAGVGRAHNLHLA-T 306 (369)
T ss_dssp HCSSCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCC-CCCHHHHHHHHHHT-T
T ss_pred hCCCCEEEcCc-cCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCc-cccHHHHHHHHHHH-c
Confidence 99999999997 688999999999999999999999999999999999999999999999995 58888876666666 4
Q ss_pred CCCcc
Q 012041 432 SGQIK 436 (472)
Q Consensus 432 ~~~i~ 436 (472)
.+...
T Consensus 307 ~~~~~ 311 (369)
T 2zc8_A 307 LPGFT 311 (369)
T ss_dssp STTBC
T ss_pred CCCCC
Confidence 44433
No 88
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=1.4e-44 Score=370.64 Aligned_cols=290 Identities=13% Similarity=0.124 Sum_probs=223.2
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
.|||++|+++.+. .+.+ +++++|+|+|||+ +||||+.+ + .++...
T Consensus 5 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~tdG~----------~G~Ge~~~----------~---~~~~~~ 61 (372)
T 3cyj_A 5 GPRVERLEVSAYTVPTDYPESDGTLQWDSTTMILVEAHGGGR----------KGLGYTYG----------D---VSVGRF 61 (372)
T ss_dssp -CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTE----------EEEEEEES----------C---THHHHH
T ss_pred CCEEeEEEEEEEeccCCCcccCcccccccccEEEEEEEeCCc----------EEEEeccC----------c---HHHHHH
Confidence 4999999988773 1222 3568999999888 89999742 1 244556
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHh-cCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEI-DGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~-~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
+++.++|.|+|+|+.+++.+|+.|.+. ..+.+ ++++.+|++|||+||||+.||.+|+|||+||| |. ++++|+
T Consensus 62 i~~~l~~~l~g~d~~~~~~i~~~l~~~~~~~~~-~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~-~~~vp~-- 134 (372)
T 3cyj_A 62 VESKLAGVAEGSDALSPPAVWARMQAAIRNAGR-PGVGAMAVSAVDIALWDLKARLLGLPLADALP---RF-HAEVPV-- 134 (372)
T ss_dssp HHHHTHHHHTTSBTTCHHHHHHHHHHHTTTTCS-SBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSC---CC-CSSEEE--
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHhhhHcCCcHHHHhC---CC-CCCceE--
Confidence 777899999999999999999999763 33322 34456899999999999999999999999999 86 456666
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
|+++ |.+. .+. .+.++++.+...+||+++| .|+|. +++.+.+.++++|+
T Consensus 135 ~~~~--g~~~---~~~---------~~~~~~a~~~~~~G~~~~K----iKvG~-------------~~~~d~~~v~avr~ 183 (372)
T 3cyj_A 135 YGSG--GFTS---YPL---------RRLQEQLGGWAAAGIPRVK----MKVGR-------------EPEKDPERVRAARE 183 (372)
T ss_dssp EEEC--CCTT---SCH---------HHHHHHHHHHHHTTCCEEE----EECCS-------------SGGGHHHHHHHHHH
T ss_pred EEEc--CCCC---CCH---------HHHHHHHHHHHHcCCCEEE----EcCCC-------------CHHHHHHHHHHHHH
Confidence 5542 2211 111 2345666666677787665 55441 22344566666666
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhC-CeeEEeCCCCcCCHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDF-PIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~-~l~~iEdP~~~~D~~~~~~ 348 (472)
++ | +++.|++|+ |+.||.+++++++. .+++| ++.|||||++++|+++|++
T Consensus 184 a~---g--~~~~l~vDa-----------------------N~~~~~~~a~~~~~-~l~~~~~i~~iEqP~~~~d~~~~~~ 234 (372)
T 3cyj_A 184 AI---G--ESVELMVDA-----------------------NGAYTRKQALYWAG-AFAREAGISYLEEPVSSEDREGLRL 234 (372)
T ss_dssp HH---C--TTSEEEEEC-----------------------TTCSCHHHHHHHHH-HHHHHHCCCEEECSSCTTCHHHHHH
T ss_pred Hh---C--CCCeEEEEC-----------------------CCCCCHHHHHHHHH-HHHhhcCCcEEECCCCcccHHHHHH
Confidence 65 3 289999999 35678899998855 58999 9999999999999999999
Q ss_pred HHhhcC--CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHH
Q 012041 349 LQSSVD--IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADL 426 (472)
Q Consensus 349 L~~~~~--~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~l 426 (472)
|+++++ +||++||+ +.+.++++++ .+++|++|||++++||||++++++++|+++|+++|++++ .+..+|+
T Consensus 235 l~~~~~~~ipIa~dE~-~~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~-----~~a~lhl 306 (372)
T 3cyj_A 235 LRDRGPGGVAIAAGEY-EWTLPQLHDL--AGCVDILQADVTRCGGITGLLRVDGICRGHQIPFSAHCA-----PAVSAHA 306 (372)
T ss_dssp HHHHSCTTCEEEECTT-CCSHHHHHHH--HTTCSEEEECTTTTTHHHHHTTHHHHHHHHTCCEEECSC-----HHHHHHH
T ss_pred HHHhCCCCCCEECCCC-ccCHHHHHHH--hCCCCEEecCchhhCCHHHHHHHHHHHHHcCCeecccch-----HHHHHHH
Confidence 999998 79999997 5678999998 899999999999999999999999999999999987664 3345565
Q ss_pred HHhh
Q 012041 427 SVGL 430 (472)
Q Consensus 427 Ava~ 430 (472)
+.++
T Consensus 307 aaa~ 310 (372)
T 3cyj_A 307 CCAV 310 (372)
T ss_dssp GGGC
T ss_pred HHhC
Confidence 5554
No 89
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=100.00 E-value=4.9e-44 Score=366.50 Aligned_cols=296 Identities=17% Similarity=0.172 Sum_probs=224.0
Q ss_pred ceEEEEEEEEEe--------cCCC-----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG-----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~-----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
|||++|+++.+. ++.+ +++++|+|+|| |+ +||||+.+.. ++.+++.+
T Consensus 2 ~kI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~V~v~td~G~----------~G~Ge~~~~g---------~~~~~~~~ 62 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGA----------TGLGYTYTVN---------HGGAAVAT 62 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSC----------EEEEEEEEES---------SSHHHHHH
T ss_pred CceEEEEEEEEeccCCCCCccccccccCcceEEEEEEEECCCC----------EEEEeecCCC---------CchHHHHH
Confidence 699999998773 2333 23699999999 99 8999986431 12345666
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHh-cCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEI-DGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~-~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
.|++.++|.|+|+||.+++.+|+.|.+. .... .+++..+|++||||||||+.||.+|+|||+||| |. ++++|+
T Consensus 63 ~i~~~l~~~l~G~d~~~~~~~~~~l~~~~~~~~-~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~v~~- 136 (371)
T 2ovl_A 63 MVDKDLRGCLLGADAEQIEKIWQSMWWRLHYAG-RGGHATSAISAVDIALWDLKGIRARTPLWKLFG---GY-DPVVPV- 136 (371)
T ss_dssp HHHHTTHHHHTTSCTTCHHHHHHHHHHHTCTTC-SSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-CSEEEE-
T ss_pred HHHHHHHHHhcCCCcccHHHHHHHHHHHhhhcC-CchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCeeE-
Confidence 6778899999999999999999999763 2222 233456899999999999999999999999999 87 456665
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|++ ++.+. .+. .+..+++.+...+||+.+| .|.|. .+++.+.+.++++|
T Consensus 137 -y~~--~~~~~---~~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~~~e~v~avr 185 (371)
T 2ovl_A 137 -YAG--GIDLE---LPV---------ADLKTQADRFLAGGFRAIK----MKVGR------------PDLKEDVDRVSALR 185 (371)
T ss_dssp -EEE--CCBTT---SCH---------HHHHHHHHHHHHTTCSCEE----EECCC------------SSHHHHHHHHHHHH
T ss_pred -EEe--CCCcC---CCH---------HHHHHHHHHHHHcCCCEEE----ECCCC------------CCHHHHHHHHHHHH
Confidence 654 23210 111 1234455555556676554 45441 12222345555555
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||++++|++++++
T Consensus 186 ~a~---G--~d~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~ 236 (371)
T 2ovl_A 186 EHL---G--DSFPLMVDA-----------------------NMKWTVDGAIRAA-RALAPFDLHWIEEPTIPDDLVGNAR 236 (371)
T ss_dssp HHH---C--TTSCEEEEC-----------------------TTCSCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHH
T ss_pred HHh---C--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCcccHHHHHH
Confidence 554 3 279999999 3567889999884 5689999999999999999999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|+++||++++||+|++++++++|+++|+++|+++ +.| ..+|++.
T Consensus 237 l~~~~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~-~~~----a~~hlaa 310 (371)
T 2ovl_A 237 IVRESGHTIAGGEN-LHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHG-VHD----LTVHALA 310 (371)
T ss_dssp HHHHHCSCEEECTT-CCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECS-CHH----HHHHHHT
T ss_pred HHhhCCCCEEeCCC-CCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcccc-HHH----HHHHHHh
Confidence 99999999999997 57799999999999999999999999999999999999999999987654 322 4566665
Q ss_pred hh
Q 012041 429 GL 430 (472)
Q Consensus 429 a~ 430 (472)
++
T Consensus 311 a~ 312 (371)
T 2ovl_A 311 SV 312 (371)
T ss_dssp SC
T ss_pred hC
Confidence 54
No 90
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=100.00 E-value=2.2e-44 Score=368.70 Aligned_cols=299 Identities=16% Similarity=0.178 Sum_probs=235.2
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. .+.+ +++++|+|+|| | + ||||+.++.. |+|.+++++++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G-~----------G~GE~~~~~~---~~~~~e~~~~~~~~ 66 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-E----------GWGECVTMAG---PLYSSEYNDGAEHV 66 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-E----------EEEECCCBSS---SSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEEecccEEEEEEEeCCC-E----------EEEEecCCCC---CccccCcHHHHHHH
Confidence 899999988773 1222 45799999998 6 3 8999865422 36888998888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
|++.++|.|+|+|+.+++++|+.|..+. + +.+|++|||+||||+.||.+|+|||+||| |.. ..+|++ |
T Consensus 67 i~~~l~~~l~g~d~~~~~~l~~~~~~~~-----g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~-~~~~~~-~ 134 (368)
T 1sjd_A 67 LRHYLIPALLAAEDITAAKVTPLLAKFK-----G--HRMAKGALEMAVLDAELRAHERSFAAELG---SVR-DSVPCG-V 134 (368)
T ss_dssp HHHTHHHHHHHSSSCCHHHHHHHHTTSC-----S--CHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CCC-SEEEBE-E
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHhc-----C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-CCccce-E
Confidence 9989999999999999999998875321 1 35799999999999999999999999999 974 467764 4
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
++ |.+. +. .+..+++.+...+||+.+| .|.| + +.+.+.++.+|++
T Consensus 135 ~~---g~~~----~~---------~~~~~~a~~~~~~Gf~~vK----ik~~-------------~--~~~~e~v~avr~~ 179 (368)
T 1sjd_A 135 SV---GIMD----TI---------PQLLDVVGGYLDEGYVRIK----LKIE-------------P--GWDVEPVRAVRER 179 (368)
T ss_dssp EE---CCCS----CH---------HHHHHHHHHHHHHTCSEEE----EECB-------------T--TBSHHHHHHHHHH
T ss_pred Ee---eCCC----CH---------HHHHHHHHHHHHhCccEEE----EecC-------------c--hhHHHHHHHHHHh
Confidence 43 2110 11 1234556666666776654 3421 1 2346777777776
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ | .++.|++|+| ++||.++ +++ .+.+++|++.|||||++++|++++++|+
T Consensus 180 ~---g--~~~~l~vDan-----------------------~~~~~~~-~~~-~~~l~~~~i~~iE~P~~~~~~~~~~~l~ 229 (368)
T 1sjd_A 180 F---G--DDVLLQVDAN-----------------------TAYTLGD-APQ-LARLDPFGLLLIEQPLEEEDVLGHAELA 229 (368)
T ss_dssp H---C--TTSEEEEECT-----------------------TCCCGGG-HHH-HHTTGGGCCSEEECCSCTTCHHHHHHHH
T ss_pred c---C--CCceEEEecc-----------------------CCCCHHH-HHH-HHHHHhcCCCeEeCCCChhhHHHHHHHH
Confidence 6 3 2799999993 4567788 887 5568999999999999999999999999
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++|++|+ .|+.++.++.++++
T Consensus 230 ~~~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~aa~~hla- 306 (368)
T 1sjd_A 230 RRIQTPICLDES-IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGM-IETGLGRAANVALA- 306 (368)
T ss_dssp TTCSSCEEESTT-CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC-CCCHHHHHHHHHHH-
T ss_pred HhCCCCEEECCC-cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCc-cccHHHHHHHHHHH-
Confidence 999999999997 688999999999999999999999999999999999999999999999995 68888776666665
Q ss_pred cCCCcc
Q 012041 431 ASGQIK 436 (472)
Q Consensus 431 ~~~~i~ 436 (472)
..+...
T Consensus 307 a~~~~~ 312 (368)
T 1sjd_A 307 SLPNFT 312 (368)
T ss_dssp TSTTBC
T ss_pred cCCCCC
Confidence 344433
No 91
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=100.00 E-value=3.2e-44 Score=368.31 Aligned_cols=295 Identities=16% Similarity=0.134 Sum_probs=224.3
Q ss_pred CceEEEEEEEEEe----c-----CCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 43 SAKVKSVKARQII----D-----SRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 43 ~m~I~~V~~~~v~----~-----~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
+|||++|+++.+. . +.+ +..++|+|+|| |+ +||||+.++. +.|..+....+.
T Consensus 9 sMKI~~I~~~~~~lPl~~~p~~~a~g~~~~~~~~lV~v~td~G~----------~G~GE~~~~~----~~~~~~~~~~~~ 74 (376)
T 4h2h_A 9 SLKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGT----------IGWGETCPVG----PTYAEAHAGGAL 74 (376)
T ss_dssp CCBEEEEEEEEEEEEBTTCCBCCTTCCBSEEEEEEEEEEETTSC----------EEEEEECCSS----SSSSSCCHHHHH
T ss_pred CeEEeEEEEEEEecccCCCCeEecCEEEEEEEEEEEEEEECCCC----------EEEEeecCCC----CCcchhhHHHHH
Confidence 5999999999873 1 112 35699999999 99 8999986542 346555555555
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
.. .+.++|.|+|+|+.+++..+.....+.+ ..+|++|||+||||+.||.+|+|||+||| |+.++++|+
T Consensus 75 ~~-~~~l~~~l~g~d~~~~~~~~~~~~~~~~-------~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~v~~- 142 (376)
T 4h2h_A 75 AA-LEVLASGLAGAEALPLPLHTRMDSLLCG-------HNYAKSALDIAVHDLWGKRLGVPVHELLG---GALTDSVSS- 142 (376)
T ss_dssp HH-HHHHHHTTTTCBSSHHHHHHHHHHHCSC-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEC-
T ss_pred HH-HHHHHHHhcCCccCcHHHHHHHHHhhcc-------cHHHHHHHHHhhhHHHHHhcCCCceecCC---CCcCCceeE-
Confidence 44 4679999999999988755443332211 24799999999999999999999999999 988888887
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|.+++.. + ..+..+++.+...+||+++| .|+|.. + .+++++.++
T Consensus 143 -y~s~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----iKvg~~------------~---~~~di~~v~ 186 (376)
T 4h2h_A 143 -YYSLGVM-------E---------PDEAARQALEKQREGYSRLQ----VKLGAR------------P---IEIDIEAIR 186 (376)
T ss_dssp -EEEECSC-------C---------HHHHHHHHHHHHHHTCSEEE----EECCSS------------C---HHHHHHHHH
T ss_pred -eeecccC-------C---------HHHHHHHHHHHHhcCceEEE----EecCCC------------C---HHHHHHHHH
Confidence 4443211 1 12345667777777887665 665521 1 233445444
Q ss_pred HHHHHhCCCC-CcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHH
Q 012041 269 DAIEKAGYTG-KINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWA 347 (472)
Q Consensus 269 ~av~~~g~~g-~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~ 347 (472)
+..+++. | ++.|++|+ |++||.++|+++ .+.++++++ |||||++ ++++++
T Consensus 187 ~vr~a~~--g~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~-~iEeP~~--~~~~~~ 237 (376)
T 4h2h_A 187 KVWEAVR--GTGIALAADG-----------------------NRGWTTRDALRF-SRECPDIPF-VMEQPCN--SFEDLE 237 (376)
T ss_dssp HHHHHHT--TSCCEEEEEC-----------------------TTCCCHHHHHHH-HHHCTTSCE-EEESCSS--SHHHHH
T ss_pred HHHhhcc--CCeeEEEEee-----------------------ccCCCHHHHHHH-HHHHhhccc-cccCCcc--hhhhHh
Confidence 4444431 3 79999999 466889999988 456788987 9999995 688999
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
+|++.+++||++||+ +.+++++.++++.+++|++|||++++||+|++++++++|+++|++++++| +.++.++.++.++
T Consensus 238 ~l~~~~~~pia~dE~-~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~a~~~gi~~~~~~-~~~~~i~~aa~~h 315 (376)
T 4h2h_A 238 AIRPLCHHALYMDED-GTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDD-AWGGDIVSAACTH 315 (376)
T ss_dssp HHGGGCCSCEEESTT-CCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBC-SSCSHHHHHHHHH
T ss_pred hhhhcccCccccCcc-cCCHHHHHHHHHhhccCccccccceeCCcHHHHHHHHHHHHcCCCEEeCC-CCccHHHHHHHHH
Confidence 999999999999997 67899999999999999999999999999999999999999999987655 5677776655555
Q ss_pred Hhh
Q 012041 428 VGL 430 (472)
Q Consensus 428 va~ 430 (472)
++.
T Consensus 316 laa 318 (376)
T 4h2h_A 316 IAS 318 (376)
T ss_dssp HHT
T ss_pred HHH
Confidence 544
No 92
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=377.64 Aligned_cols=301 Identities=18% Similarity=0.185 Sum_probs=220.8
Q ss_pred CceEEEEEEEEEecC----------C----CCCeEEEEEEEC---CeeeeeccCCCccccceeeeeccCCCCccCcchHH
Q 012041 43 SAKVKSVKARQIIDS----------R----GNPTVEVDLITD---DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVL 105 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~----------~----~~~~v~V~I~td---G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~ 105 (472)
.|||++|+++.+.-. . ....++|+|+|| |+ +||||+... +.+.+
T Consensus 4 ~mkI~~i~~~~v~~p~~~~~~~s~~~~~~~~~~~~~V~i~Td~~dG~----------~G~Ge~~~~---------g~~~~ 64 (441)
T 4a35_A 4 RGRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGI----------KGCGITFTL---------GKGTE 64 (441)
T ss_dssp CCBEEEEEEEEEECCGGGTTCCCCSSCSSCCCEEEEEEEEESSCSCC----------CEEEEEEEC---------STTHH
T ss_pred CCEEEEEEEEEEEecCCCCCCCccceeccCcceEEEEEEEECCCCCC----------EEEEeeeCC---------CCChH
Confidence 489999999998521 1 123699999998 77 899998542 22234
Q ss_pred HHHHHHHHhhhhcccCCCCCCHHHHHHHHHH-hcCC----CCC--CccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhc
Q 012041 106 NAVKNINDILGPKLVGVDIRDQAEVDAIMLE-IDGT----PNK--SKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELS 178 (472)
Q Consensus 106 ~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~-~~~~----~~~--~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~ 178 (472)
.+...+ +.++|.|+|+||.+++++|+.+++ +... +.+ +++...|+||||+||||++||.+|+|||+|||
T Consensus 65 ~~~~~i-~~l~~~liG~d~~~i~~~~~~~~~~l~~~~~~~~~g~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG--- 140 (441)
T 4a35_A 65 VVVCAV-NALAHHVLNKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLV--- 140 (441)
T ss_dssp HHHHHH-HHHGGGTTTCBHHHHHTTHHHHHHHHHSCTTGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHH---
T ss_pred HHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHHHhhccceeecCCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 445555 569999999999999765555543 2211 111 12335799999999999999999999999999
Q ss_pred CCCcceee---------------------------------------eeEEEeecCCccCCCcccccceeeccCCcccHH
Q 012041 179 GTKELVMP---------------------------------------VPAFNVINGGSHAGNNLAMQEFMILPVGATSFA 219 (472)
Q Consensus 179 G~~~~~vp---------------------------------------~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~ 219 (472)
|..+++++ +|.|++.. |+.. .+. ++..+
T Consensus 141 G~~r~~i~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~p~y~~~~-g~~~---~~~---------e~~~~ 207 (441)
T 4a35_A 141 DMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSC-AWLG---YSD---------DTLKQ 207 (441)
T ss_dssp HSCHHHHHTTCCCTTTTTTCCHHHHHHHHHHTTTTHHHHHHHHHHHCEEEEECTT-CCTT---CCH---------HHHHH
T ss_pred CCCcccceecccccccccccchhhhhhhhhhcccccchhhhhhcccCcceEEecc-ccCC---CCH---------HHHHH
Confidence 97655443 45576521 2110 011 23345
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCccee
Q 012041 220 EALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYD 299 (472)
Q Consensus 220 ~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~ 299 (472)
++.+...+||+++| .|+|. +.+.+.++++++|+++ | +++.|++|+
T Consensus 208 ~a~~~~~~Gf~~~K----lKvG~-------------~~~~d~~~v~avR~a~---G--~~~~l~vDa------------- 252 (441)
T 4a35_A 208 LCAQALKDGWTRFK----VKVGA-------------DLQDDMRRCQIIRDMI---G--PEKTLMMDA------------- 252 (441)
T ss_dssp HHHHHHHTTCCEEE----EECSS-------------CHHHHHHHHHHHHHHH---C--TTSEEEEEC-------------
T ss_pred HHHHHHHCCCCEEE----EcCCC-------------CHHHHHHHHHHHHHHh---C--CCCeEEEEC-------------
Confidence 55556666777665 56541 1233345555555554 3 289999999
Q ss_pred ecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhh---cCCeEEeCCccccCHHHHHHHHHc
Q 012041 300 LNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSS---VDIQLVGDDLLVTNPKRIAEAIQK 376 (472)
Q Consensus 300 ~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~---~~~pI~~dE~~~~~~~~~~~~i~~ 376 (472)
|++||.++|+++ .+.+++|++.|||||++++|+++|++|+++ +++||++||+ +.++++++++++.
T Consensus 253 ----------N~~~~~~~A~~~-~~~L~~~~~~~iEeP~~~~d~~~~~~l~~~l~~~~iPIa~gE~-~~~~~~~~~~l~~ 320 (441)
T 4a35_A 253 ----------NQRWDVPEAVEW-MSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQ-CHNRVIFKQLLQA 320 (441)
T ss_dssp ----------TTCCCHHHHHHH-HHHHGGGCCSEEECCSCTTCHHHHHHHHHHHGGGTCEEEECTT-CCSHHHHHHHHHT
T ss_pred ----------CCCCCHHHHHHH-HHhhcccCccEEeCCCCcccHHHHHHHHHhccCCCCCEEeCCc-cccHHHHHHHHHc
Confidence 466889999988 556899999999999999999999999997 7899999997 5789999999999
Q ss_pred CCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH-HHHHHH
Q 012041 377 KSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNF-IADLSV 428 (472)
Q Consensus 377 ~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~-~a~lAv 428 (472)
+++|++|||++++||||++++++++|+++|+++ .+|.+ ..+.+. ++|+++
T Consensus 321 ~a~div~~d~~~~GGit~~~kia~lA~~~gv~v-~~H~~-~ig~aa~~~hl~~ 371 (441)
T 4a35_A 321 KALQFLQIDSCRLGSVNENLSVLLMAKKFEIPV-CPHAG-GVGLCELVQHLII 371 (441)
T ss_dssp TCCSEECCCTTTSSHHHHHHHHHHHHHHTTCCB-CCCCC-TTTHHHHHHHHHH
T ss_pred CCCCEEEECccccCCHHHHHHHHHHHHHcCCEE-EEeCC-hHHHHHHHHHHhh
Confidence 999999999999999999999999999999997 57843 233332 346653
No 93
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=100.00 E-value=2.1e-44 Score=370.81 Aligned_cols=273 Identities=17% Similarity=0.168 Sum_probs=205.9
Q ss_pred CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcC
Q 012041 61 PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDG 139 (472)
Q Consensus 61 ~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~ 139 (472)
.+|+|+|+|| |+ +||||+. .+ ..+...+++.++|.|+|+||.+++++|+.|++...
T Consensus 59 ~~v~V~v~td~G~----------~G~Ge~~----------~g---~~~~~~i~~~l~p~LiG~dp~~ie~i~~~m~~~~~ 115 (404)
T 3ekg_A 59 GTLVVEIEASDGN----------VGFAVTT----------GG---EPAAYIVEKHLARFLEGARVTDIERIWDQMYNSTL 115 (404)
T ss_dssp CEEEEEEEETTSC----------EEEEEEE----------CH---HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHG
T ss_pred cEEEEEEEECCCC----------EEEEeCC----------Cc---HHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhh
Confidence 4599999999 99 8999863 12 23445677889999999999999999999986321
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHH
Q 012041 140 TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFA 219 (472)
Q Consensus 140 ~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~ 219 (472)
....+++..+|++||||||||++||.+|+|||+||| |..++++|+ |++ |. . .+
T Consensus 116 ~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~--g~-------~-------------~~ 168 (404)
T 3ekg_A 116 YYGRKGLVINTISGVDLALWDLLGKVRREPVHQLLG---GAVRDELQF--YAT--GA-------R-------------PD 168 (404)
T ss_dssp GGCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSEEEE--EEE--SS-------C-------------HH
T ss_pred hcCCCcchHHHHHHHHHHHHHHHHHHhCCCHHHHcC---CCCCCeeEE--ecC--CC-------C-------------HH
Confidence 111122335799999999999999999999999999 987778877 543 11 0 11
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCccee
Q 012041 220 EALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYD 299 (472)
Q Consensus 220 ~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~ 299 (472)
.+ ..+||+++| +|+|.... .|. .+++.+.++++++|+++ | +++.|++|+
T Consensus 169 ~~---~~~Gf~~~K----~Kv~~g~~----~g~--~~~~~di~~v~avRea~---G--~~~~L~vDa------------- 217 (404)
T 3ekg_A 169 LA---QKMGFIGGK----MPLHHGPS----EGE--EGLKKNLEELATMRERV---G--PDFWLMFDC------------- 217 (404)
T ss_dssp HH---HHTTCSEEE----EECCCCGG----GHH--HHHHHHHHHHHHHHHHH---C--SSSEEEEEC-------------
T ss_pred HH---HHcCCCEEE----EecCCCCc----ccc--ccHHHHHHHHHHHHHHh---C--CCCeEEecC-------------
Confidence 12 234576554 55431100 000 01122344555555554 3 289999999
Q ss_pred ecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCe--EEeCCccccCHHHHHHHHHcC
Q 012041 300 LNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQ--LVGDDLLVTNPKRIAEAIQKK 377 (472)
Q Consensus 300 ~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~p--I~~dE~~~~~~~~~~~~i~~~ 377 (472)
|+.||.++|+++ .+.+++|++.|||||++++|+++|++|++++++| |++||+ ..++++++++++.+
T Consensus 218 ----------N~~w~~~~A~~~-~~~Le~~~l~~iEeP~~~~d~~~~a~l~~~~~~pi~Ia~gE~-~~~~~~~~~li~~~ 285 (404)
T 3ekg_A 218 ----------WMSLDLNYATRL-ARGAREYGLKWIEEALPPDDYWGYAELRRNAPTGMMVTTGEH-EATRWGFRMLLEMG 285 (404)
T ss_dssp ----------TTCCCHHHHHHH-HHHHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTT-CCHHHHHHHHHHTT
T ss_pred ----------CCCCCHHHHHHH-HHHHhhcCCcEEecCCCcccHHHHHHHHHhcCCCeEEEecCc-cCCHHHHHHHHHcC
Confidence 467889999988 5568999999999999999999999999999855 999997 56789999999999
Q ss_pred CCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 378 SCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 378 a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
++|++|||++++||||++++++++|+++|++++ .|.++ ..++|+++++.
T Consensus 286 a~dii~~d~~~~GGitea~kia~lA~a~gv~v~-~h~~~----~a~~hl~aa~p 334 (404)
T 3ekg_A 286 CCDIIQPDVGWCGGVTELLKISALADAHNALVV-PHGSS----VYSYHFVATRQ 334 (404)
T ss_dssp CCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCCT----HHHHHHHTTCT
T ss_pred CCCeEecChhhcCCccHHHHHHHHHHHcCCEEE-ecCcH----HHHHHHHHhCC
Confidence 999999999999999999999999999999985 55332 25667776653
No 94
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=100.00 E-value=1.6e-44 Score=376.56 Aligned_cols=308 Identities=14% Similarity=0.152 Sum_probs=223.1
Q ss_pred CceEEEEEEEEEec-------CCC--C---CeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 43 SAKVKSVKARQIID-------SRG--N---PTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 43 ~m~I~~V~~~~v~~-------~~~--~---~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
.|||++|+++.|.. +.+ . ..++|+|+||++ +||||+. +++ .+...
T Consensus 26 ~mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~~----------~G~GE~~----------g~~---~~~~~ 82 (445)
T 3va8_A 26 RSIIKEIVITPVAFHDMPLLNSVGVHEPFALRSIIEIITEDS----------YGLGESY----------GDS---AHLDR 82 (445)
T ss_dssp HTBCCEEEEEEEEEECCCBEETTEECCSEEEEEEEEEECSSC----------EEEEEEE----------CCH---HHHHH
T ss_pred CCEEEEEEEEEEecCCcccccccCcccCceeEEEEEEEECCC----------EEEEecC----------CcH---HHHHH
Confidence 39999999998842 111 1 238999999843 8999973 232 33444
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhc-CCCC---CCc--------cchhHHHHHHHHHHHHHHhhcCCchHHHhhhhc
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEID-GTPN---KSK--------IGANAILGVSLSVCRAGAGAKGVPLYKHIQELS 178 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~-~~~~---~~~--------~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~ 178 (472)
| +.++|.|+|+||.+++++|+.|++.. ...+ .+. +...|++||||||||+.||.+|+|||+|||
T Consensus 83 i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~~~~~~G~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG--- 158 (445)
T 3va8_A 83 L-QKAADKIKGLSVYSTNVIYQRCVESLRNDTNTGGDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLG--- 158 (445)
T ss_dssp H-HHHHHHHTTSBTTCHHHHHHHHHHHTTTCCC--CCSSTTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---
T ss_pred H-HHHHHHHCCCChhHHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 5 46999999999999999999998732 2110 111 334799999999999999999999999999
Q ss_pred CCCcceeeeeEEEeecCCccCCC-cccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCcccCCCCCCCCCC
Q 012041 179 GTKELVMPVPAFNVINGGSHAGN-NLAMQEFMILPVGATSFAEALRMGSE-VYHILKGIIKEKYGQDACNVGDEGGFAPN 256 (472)
Q Consensus 179 G~~~~~vp~~~~~~~~gg~~~~~-~l~~~e~~~~p~~~~~~~~a~~~~~~-~~~~lk~~lk~k~G~~~~~~~~~G~~~~~ 256 (472)
|..++++|+..|.......+.+. ....- .+..+++.++++.+...+ ||+++| .|.|. .+
T Consensus 159 G~~r~~v~~~a~~~y~~~~~~g~~~~~~~---~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~------------~~ 219 (445)
T 3va8_A 159 GRVRDSVQYSAYLFYKWGGHPGDEDDEYG---PALDPEGVVKQAKKIIDEYGFKAIK----LKGGV------------FP 219 (445)
T ss_dssp CCSSSEEEBCEEEECBCSSSTTSCCCTTC---CBCSHHHHHHHHHHHHHHHCCSCEE----EECSS------------SC
T ss_pred CCCCCeEEEeeeecccccccccccccccc---cCCCHHHHHHHHHHHHHhcCCCEEE----EccCC------------CC
Confidence 98788899855432110000000 00000 001112345555555554 777665 56542 11
Q ss_pred CCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeC
Q 012041 257 VQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIED 336 (472)
Q Consensus 257 ~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEd 336 (472)
.+.+.++++++|+++ +++.|++|+ |++||.++|+++ .+.+++| +.||||
T Consensus 220 ~~~Di~~v~avRea~------~~~~L~vDa-----------------------N~~w~~~~Ai~~-~~~L~~~-l~~iEe 268 (445)
T 3va8_A 220 PADEVAAIKALHKAF------PGVPLRLDP-----------------------NAAWTVETSKWV-AKELEGI-VEYLED 268 (445)
T ss_dssp HHHHHHHHHHHHHHS------TTCCEEEEC-----------------------TTCBCHHHHHHH-HHHTTTT-CSEEES
T ss_pred HHHHHHHHHHHHHhC------CCCcEeeeC-----------------------CCCCCHHHHHHH-HHHHhhh-cCeEee
Confidence 122344444444443 478999999 467889999988 5568999 999999
Q ss_pred CCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 012041 337 PFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSG 416 (472)
Q Consensus 337 P~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~ 416 (472)
|++ |+++|++|++++++||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|.+.
T Consensus 269 P~~--d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~div~~d~~~~GGitea~kia~lA~~~gv~v~-~h~~~ 344 (445)
T 3va8_A 269 PAG--EIEGMAAVAKEASMPLATNMA-VVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICATWGLRLS-MHSNS 344 (445)
T ss_dssp CBS--HHHHHHHHHTTCSSCEEESSS-CCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-ECCCS
T ss_pred cCc--CHHHHHHHHHcCCCCEEeCCc-cCCHHHHHHHHHcCCCCEEEecchhcCCHHHHHHHHHHHHHcCCEEE-EeCCc
Confidence 985 899999999999999999997 67889999999999999999999999999999999999999999975 56678
Q ss_pred CChhhHHHHHHHhhc
Q 012041 417 ETEDNFIADLSVGLA 431 (472)
Q Consensus 417 Et~~s~~a~lAva~~ 431 (472)
|+.++.++.++++..
T Consensus 345 e~~I~~aa~~hlaaa 359 (445)
T 3va8_A 345 HLGISLAAMTHLASA 359 (445)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHh
Confidence 888877665555543
No 95
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=100.00 E-value=1.2e-44 Score=376.15 Aligned_cols=273 Identities=16% Similarity=0.162 Sum_probs=206.3
Q ss_pred CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcC
Q 012041 61 PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDG 139 (472)
Q Consensus 61 ~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~ 139 (472)
.+|+|+|+|| |+ +||||+.. + ..++..|.+.++|.|+|+||.+++++|+.|++...
T Consensus 65 ~~vlV~V~tddGi----------~G~Ge~~~----------~---~~~~~~i~~~lap~LiG~dp~~ie~i~~~m~~~~~ 121 (455)
T 3fxg_A 65 GSFLVEIEATDGT----------VGFATGFG----------G---PPACWLVHQHFERFLIGADPRNTNLLFEQMYRASM 121 (455)
T ss_dssp CEEEEEEEETTSC----------EEEEEEEC----------H---HHHHHHHHHTTHHHHTTCCTTCHHHHHHHHHHHTT
T ss_pred eEEEEEEEECCCC----------EEEEeCcC----------C---HHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHhhh
Confidence 3599999999 99 89998631 2 23445677889999999999999999999986422
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHH
Q 012041 140 TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFA 219 (472)
Q Consensus 140 ~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~ 219 (472)
.....+...+|++||||||||+.||.+|+|||+||| |+.++++|+ |++ |. . .+
T Consensus 122 ~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~rd~vp~--y~~--g~-------~-------------~~ 174 (455)
T 3fxg_A 122 FYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIG---GATKERLDF--YCT--GP-------E-------------PT 174 (455)
T ss_dssp TTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSEEEE--EEE--SS-------C-------------HH
T ss_pred hccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CccCCeeEE--eec--CC-------C-------------HH
Confidence 111122334699999999999999999999999999 987788887 542 11 0 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCccee
Q 012041 220 EALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYD 299 (472)
Q Consensus 220 ~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~ 299 (472)
.+ ..+||+++| +|+|... .+|. .+++.+.++++++|+++ | +++.|++|+
T Consensus 175 ~~---~~~Gf~~~K----lKv~~~~----~~G~--~~~~~di~rv~avRea~---G--~d~~L~vDa------------- 223 (455)
T 3fxg_A 175 AA---KAMGFWGGK----VPLPFCP----DDGH--EGLRKNVEFLRKHREAV---G--PDFPIMVDC------------- 223 (455)
T ss_dssp HH---HHHTCSCEE----EECCCCG----GGHH--HHHHHHHHHHHHHHHHH---C--SSSCEEEEC-------------
T ss_pred HH---HHcCCCEEE----EcCCCCc----cccc--ccHHHHHHHHHHHHHHh---C--CCCeEEEeC-------------
Confidence 12 235676664 5543210 0010 01122344444444444 3 289999999
Q ss_pred ecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCC
Q 012041 300 LNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKS 378 (472)
Q Consensus 300 ~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a 378 (472)
|+.|+.++|+++ .+.+++|++.|||||++++|+++|++|++++. +||++||+ +.++++++++++.++
T Consensus 224 ----------N~~wt~~~Ai~~-~~~Le~~~l~~iEEPl~~dd~~~la~L~~~~~~iPIA~gEs-~~s~~d~~~li~~~a 291 (455)
T 3fxg_A 224 ----------YMSLNVSYTIEL-VKACLDLNINWWEECLSPDDTDGFALIKRAHPTVKFTTGEH-EYSRYGFRKLVEGRN 291 (455)
T ss_dssp ----------TTCCCHHHHHHH-HHHTGGGCCSEEECCSCGGGGGGHHHHHHHCTTSEEEECTT-CCHHHHHHHHHTTCC
T ss_pred ----------CCCCCHHHHHHH-HHhcccCCcceecCCCCcchHHHHHHHHHhCCCCeEECCCc-cCCHHHHHHHHHcCC
Confidence 466889999988 56689999999999999999999999999985 99999997 567899999999999
Q ss_pred CCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 379 CNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 379 ~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
+|++|+|+++|||||++++++++|+++|++++ +|.++ ..++||++++.
T Consensus 292 vDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~-~H~~~----~aslHlaaa~p 339 (455)
T 3fxg_A 292 LDIIQPDVMWLGGLTELLKVAALAAAYDVPVV-PHASG----PYSYHFQISQP 339 (455)
T ss_dssp CSEECCCTTTSSCHHHHHHHHHHHHTTTCCBC-CCSCT----HHHHHHHTTCT
T ss_pred CCEEEECccccCCHHHHHHHHHHHHHcCCEEE-ecchH----HHHHHHHHhCC
Confidence 99999999999999999999999999999985 56432 34567666653
No 96
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=100.00 E-value=6.9e-44 Score=367.45 Aligned_cols=282 Identities=13% Similarity=0.122 Sum_probs=217.3
Q ss_pred eEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcCC
Q 012041 62 TVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGT 140 (472)
Q Consensus 62 ~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~ 140 (472)
+++|+|+|| |+ +||||+.++ .+++ ++...|++.++|.|+|+|+.+++.+|+.|.+. ++
T Consensus 52 ~~~V~v~td~G~----------~G~GE~~~~--------~~~~--~~~~~i~~~l~~~l~G~d~~~~~~i~~~l~~~-~~ 110 (388)
T 2nql_A 52 SVLVRMTTEAGT----------VGWGETYGI--------VAPG--AVAALINDLLAGFVIGRDASDPSAVYDDLYDM-MR 110 (388)
T ss_dssp EEEEEEEETTCC----------EEEEEEECS--------SCHH--HHHHHHHHTHHHHHTTCCSSSHHHHHHHHHHH-HG
T ss_pred EEEEEEEECCCC----------EEEEEecCC--------CCcH--HHHHHHHHHHHHHhcCCCcccHHHHHHHHHhh-cc
Confidence 689999999 99 899998642 2222 45666777899999999999999999999541 11
Q ss_pred CCC--CccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccH
Q 012041 141 PNK--SKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSF 218 (472)
Q Consensus 141 ~~~--~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~ 218 (472)
.+. .++..+|++|||+||||+.||.+|+|||+||| |. ++++|+ |+++ |.+. +. .+..
T Consensus 111 ~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~-~~~vp~--~~~~--g~~~----~~---------e~~~ 169 (388)
T 2nql_A 111 VRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLG---GG-VDSFPA--YVSG--LPER----TL---------KARG 169 (388)
T ss_dssp GGTCSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-CSEEEE--EEEC--CCCS----SH---------HHHH
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCceEe--eEEe--CCCC----CH---------HHHH
Confidence 111 22346899999999999999999999999999 97 567776 5543 2110 11 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcce
Q 012041 219 AEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNY 298 (472)
Q Consensus 219 ~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y 298 (472)
+++.+...+||+.+| .|.|. .+.+. .+.++.+|+++ | .++.|++|+
T Consensus 170 ~~a~~~~~~Gf~~vK----ik~g~------------~~~~~-~e~v~avr~a~---g--~d~~l~vDa------------ 215 (388)
T 2nql_A 170 ELAKYWQDRGFNAFK----FATPV------------ADDGP-AAEIANLRQVL---G--PQAKIAADM------------ 215 (388)
T ss_dssp HHHHHHHHTTCCEEE----EEGGG------------CTTCH-HHHHHHHHHHH---C--TTSEEEEEC------------
T ss_pred HHHHHHHHhCCCEEE----EeCCC------------CChHH-HHHHHHHHHHh---C--CCCEEEEEC------------
Confidence 455555556676554 44431 12233 45555555554 3 279999999
Q ss_pred eecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCC
Q 012041 299 DLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKS 378 (472)
Q Consensus 299 ~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a 378 (472)
|++|+.+++++++ +.++++++.|||||++++|++++++|++++++||++||+ ++++++++++++.++
T Consensus 216 -----------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~-~~~~~~~~~~i~~~~ 282 (388)
T 2nql_A 216 -----------HWNQTPERALELI-AEMQPFDPWFAEAPVWTEDIAGLEKVSKNTDVPIAVGEE-WRTHWDMRARIERCR 282 (388)
T ss_dssp -----------CSCSCHHHHHHHH-HHHGGGCCSCEECCSCTTCHHHHHHHHTSCCSCEEECTT-CCSHHHHHHHHTTSC
T ss_pred -----------CCCCCHHHHHHHH-HHHhhcCCCEEECCCChhhHHHHHHHHhhCCCCEEEeCC-cCCHHHHHHHHHcCC
Confidence 3567889999885 568999999999999999999999999999999999997 568999999999999
Q ss_pred CCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCC
Q 012041 379 CNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQ 434 (472)
Q Consensus 379 ~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~ 434 (472)
+|+++||+++ ||+|++++++++|+++|+++|+ |.+.|+.++.+++++++...+.
T Consensus 283 ~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~-h~~~es~i~~aa~~hlaa~~~~ 336 (388)
T 2nql_A 283 IAIVQPEMGH-KGITNFIRIGALAAEHGIDVIP-HATVGAGIFLAASLQASSTLSM 336 (388)
T ss_dssp CSEECCCHHH-HCHHHHHHHHHHHHHHTCEECC-CCCSSCSHHHHHHHHHHTTCTT
T ss_pred CCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEe-ecCCCcHHHHHHHHHHHHhCCc
Confidence 9999999999 9999999999999999999865 6578998887666666654443
No 97
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=100.00 E-value=1e-44 Score=372.14 Aligned_cols=296 Identities=17% Similarity=0.134 Sum_probs=227.3
Q ss_pred CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCC------------CC
Q 012041 60 NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDI------------RD 126 (472)
Q Consensus 60 ~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~------------~d 126 (472)
+++++|+| |+ |+ +||||+.+++ .|.++++.++...++ .+.|.|+|+|| .+
T Consensus 30 ~~~v~V~v-td~G~----------~G~GE~~~~~-----~~~~e~~~~~~~~l~-~~~~~l~g~d~~~~~~~~~~~~~~~ 92 (377)
T 2pge_A 30 KPTWFVRL-DIDGH----------GGQGEVSLIP-----GLSLDPEEQIGRELD-LLARRLRAEEPIRLRQFLAERGGAD 92 (377)
T ss_dssp ECEEEEEE-EETTE----------EEEEEEECCT-----TTCSSCHHHHHHHHH-HHHHHHHHSCCHHHHHHHHHTSSCT
T ss_pred cceEEEEE-EcCCC----------EEEEEeccCC-----CCCcCCHHHHHHHHH-HHHHHHhCCCccchhhhhhcccccc
Confidence 56899999 88 99 8999997652 477788888888787 68999999988 44
Q ss_pred HHHHHHHHHHhcCC-----CCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCC
Q 012041 127 QAEVDAIMLEIDGT-----PNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGN 201 (472)
Q Consensus 127 ~e~i~~~l~~~~~~-----~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~ 201 (472)
++.+|+.|.+++++ ........+|++|||+||||+.||.+|+|||+||| |. ++++|++. +++++
T Consensus 93 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~~llG---g~-~~~vp~~~--~i~~~----- 161 (377)
T 2pge_A 93 FSDYRSVLTDIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFASDFT---RG-EKRIPVNG--LIWMG----- 161 (377)
T ss_dssp TSCHHHHHHHHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCSTTT---TT-SCCEEBCE--EECCC-----
T ss_pred HHHHHHhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CC-CCeEEEeE--EecCC-----
Confidence 56777777543211 11122456899999999999999999999999999 87 45777744 44322
Q ss_pred cccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcE
Q 012041 202 NLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIN 281 (472)
Q Consensus 202 ~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~ 281 (472)
+. + ..++++.+...+||+++| .|+|. .+.+++++.++++.+.+|+ +++.
T Consensus 162 --~~-e--------~~~~~a~~~~~~G~~~~K----~Kvg~---------------~~~~~d~~~v~avr~~~g~-~~~~ 210 (377)
T 2pge_A 162 --EA-A--------FMQEQIEAKLAEGYGCLK----LKIGA---------------IDFDKECALLAGIRESFSP-QQLE 210 (377)
T ss_dssp --CH-H--------HHHHHHHHHHHTTCSEEE----EEC------------------CHHHHHHHHHHHHHHSCT-TTCE
T ss_pred --CH-H--------HHHHHHHHHHHHhhhhhe----eecCC---------------CChHHHHHHHHHHHHHcCC-CCce
Confidence 11 1 234566666667787665 55441 1135566666666655542 2799
Q ss_pred EEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCC
Q 012041 282 IGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDD 361 (472)
Q Consensus 282 l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE 361 (472)
|++|+| +.||.+++++++ +.+++|++.|||||++++|+++|++|++++++||++||
T Consensus 211 l~vDaN-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE 266 (377)
T 2pge_A 211 IRVDAN-----------------------GAFSPANAPQRL-KRLSQFHLHSIEQPIRQHQWSEMAALCANSPLAIALDE 266 (377)
T ss_dssp EEEECT-----------------------TBBCTTTHHHHH-HHHHTTCCSEEECCBCSSCHHHHHHHHHHCSSCEEESG
T ss_pred EEEECC-----------------------CCCCHHHHHHHH-HHHhcCCCcEEEccCCcccHHHHHHHHhhCCCcEEECC
Confidence 999993 456778899885 67899999999999999999999999999999999999
Q ss_pred ccccCHHH--HHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCC
Q 012041 362 LLVTNPKR--IAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGA 439 (472)
Q Consensus 362 ~~~~~~~~--~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~ 439 (472)
+..+ ..+ ++++++.+++|++|||++++||||++++++++|+++|+++|++|+ .|++++.++.++++...+...+.+
T Consensus 267 ~~~~-~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~~a~~hlaa~~~~~~~~~ 344 (377)
T 2pge_A 267 ELIG-LGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIELARERGIGFWITSA-LESNLGLAAIAQWTALYQPTMPQG 344 (377)
T ss_dssp GGTT-CCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEBCC-SCCHHHHHHHHHHHHTTCCSSCBB
T ss_pred ccCC-cchHHHHHHHHhCCCCEEEECchhcCCHHHHHHHHHHHHHCCCeEEecCC-cccHHHHHHHHHHHHCCCCCcccc
Confidence 8554 466 889999999999999999999999999999999999999988885 799988877777777666654444
Q ss_pred C
Q 012041 440 P 440 (472)
Q Consensus 440 ~ 440 (472)
+
T Consensus 345 l 345 (377)
T 2pge_A 345 L 345 (377)
T ss_dssp C
T ss_pred C
Confidence 3
No 98
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=100.00 E-value=1.7e-43 Score=363.46 Aligned_cols=298 Identities=15% Similarity=0.119 Sum_probs=231.4
Q ss_pred ceEEEEEEEEEec---------CCC-----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQIID---------SRG-----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~~---------~~~-----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+++.+.. +.+ +++++|+|+|| |+ +||||+.++. ++|.+++..++.
T Consensus 3 mkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~----~~~~~~~~~~~~ 68 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGL----------QGCGEFTPCG----ENYMIAHSEGVD 68 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSC----------EEEEEEBCSS----TTSSSCCTTHHH
T ss_pred CEEEEEEEEEEeeecCCCCcEecCceeecccceEEEEEEECCCC----------EEEEEeecCC----CCcCCCCHHHHH
Confidence 8999999988731 112 24699999999 98 8999986541 357777777777
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
..|+ .++|.|+|+||.+++.+|+.|.... .+ ..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 69 ~~i~-~l~~~l~g~d~~~~~~~~~~l~~~~----~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~~- 137 (379)
T 2rdx_A 69 AFAR-LAAPQLLGQDPRQVARMERLMDHLV----QG--HGYAKAPFDAAFWDILGQATGQPVWMLLG---GKLCDGAPM- 137 (379)
T ss_dssp HHHH-HHHHHHTTSCTTCHHHHHHHHHHHS----SS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SCCCSSEEB-
T ss_pred HHHH-HHHHHHcCCChhhHHHHHHHHHHHh----cc--cHHHHHHHHHHHHHHhHHHhCCCHHHHcC---CCCCCceeE-
Confidence 7787 7999999999999999999995321 11 46899999999999999999999999999 976677777
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|.+++.+ +. .+..+++.+...+||+.+| .|.|. + ....++.++
T Consensus 138 -~~~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~-------------~---~~~~~e~v~ 180 (379)
T 2rdx_A 138 -YRVAPQR-------SE---------AETRAELARHRAAGYRQFQ----IKVGA-------------D---WQSDIDRIR 180 (379)
T ss_dssp -CEECCCS-------CS---------HHHHHHHHHHHHTTCCEEE----EECCS-------------C---HHHHHHHHH
T ss_pred -EEEecCC-------CH---------HHHHHHHHHHHHcCCCEEE----EeccC-------------C---HHHHHHHHH
Confidence 4433111 11 2234555555556666554 44331 1 133344443
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
...+..| +++.|++|+ |++||.++++++ .+.++++++ |||||++ |++++++
T Consensus 181 avr~a~g--~d~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i-~iE~P~~--~~~~~~~ 231 (379)
T 2rdx_A 181 ACLPLLE--PGEKAMADA-----------------------NQGWRVDNAIRL-ARATRDLDY-ILEQPCR--SYEECQQ 231 (379)
T ss_dssp HHGGGSC--TTCEEEEEC-----------------------TTCSCHHHHHHH-HHHTTTSCC-EEECCSS--SHHHHHH
T ss_pred HHHHhcC--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhCCe-EEeCCcC--CHHHHHH
Confidence 3333333 289999999 356788999988 456899999 9999998 9999999
Q ss_pred HHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHH
Q 012041 349 LQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSV 428 (472)
Q Consensus 349 L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAv 428 (472)
|++++++||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|+++|+++ +.|++++.++++++
T Consensus 232 l~~~~~iPI~~de~-i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~~a~~~l 309 (379)
T 2rdx_A 232 VRRVADQPMKLDEC-VTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED-SWGGEIASAAVAHF 309 (379)
T ss_dssp HHTTCCSCEEECTT-CCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC-SBCSHHHHHHHHHH
T ss_pred HHhhCCCCEEEeCC-cCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee-ccCcHHHHHHHHHH
Confidence 99999999999997 68899999999999999999999999999999999999999999998765 57999888777777
Q ss_pred hhcCCC
Q 012041 429 GLASGQ 434 (472)
Q Consensus 429 a~~~~~ 434 (472)
+...+.
T Consensus 310 aaa~~~ 315 (379)
T 2rdx_A 310 AASTPE 315 (379)
T ss_dssp HHTSCT
T ss_pred HHcCCC
Confidence 665444
No 99
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=100.00 E-value=4.3e-44 Score=369.53 Aligned_cols=300 Identities=17% Similarity=0.225 Sum_probs=224.5
Q ss_pred CceEEEEEEEEEe--------cCC----------CCCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcch
Q 012041 43 SAKVKSVKARQII--------DSR----------GNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKG 103 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~----------~~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~ 103 (472)
.|||++|+++.+. .+. .+++++|+|+|| |+ +||||+.. . .+.++
T Consensus 12 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~----------~G~GE~~~-~-----~~~~~- 74 (393)
T 2og9_A 12 SDRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGH----------QGLGFSYS-K-----RAGGP- 74 (393)
T ss_dssp CCCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSC----------EEEEEEEE-E-----STTHH-
T ss_pred CCeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCC----------EEEEEecC-c-----ccchH-
Confidence 3999999998883 121 135799999999 99 89999832 1 12332
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcc
Q 012041 104 VLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKEL 183 (472)
Q Consensus 104 ~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~ 183 (472)
.....++ .++|.|+|+||.+++.+|+.|.+.......+++..+|++|||+||||+.||.+|+|||+||| |. ++
T Consensus 75 --~~~~~i~-~l~~~l~G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llG---g~-~~ 147 (393)
T 2og9_A 75 --GQFAHAR-EIAPALIGEDPSDIAKLWDKLCWAGASAGRSGLSTQAIGAFDVALWDLKAKRAGLSLAKLLG---SY-RD 147 (393)
T ss_dssp --HHHHHHH-HHGGGGTTSCTTCHHHHHHHHHHTTGGGCSSSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHC---CS-CS
T ss_pred --HHHHHHH-HHHHHHcCCChhhHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CC
Confidence 3333344 59999999999999999999986432111223456899999999999999999999999999 87 45
Q ss_pred eeeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHH
Q 012041 184 VMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREG 263 (472)
Q Consensus 184 ~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~ 263 (472)
++|+ |++++ +.+. .+. .+..+++.+...+||+.+| .|.|. .+++.+.+.
T Consensus 148 ~vp~--y~~~g-~~~~---~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~~~~~e~ 196 (393)
T 2og9_A 148 SVRC--YNTSG-GFLH---TPI---------DQLMVNASASIERGIGGIK----LKVGQ------------PDGALDIAR 196 (393)
T ss_dssp EEEE--EBCTT-CCTT---SCH---------HHHHHHHHHHHHTTCCCEE----EECCC------------SCHHHHHHH
T ss_pred ceEE--EEECC-CcCC---CCH---------HHHHHHHHHHHHcCCCEEE----EecCC------------CCHHHHHHH
Confidence 6664 65532 2110 111 1234555555556676554 45431 112233455
Q ss_pred HHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCH
Q 012041 264 LVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDW 343 (472)
Q Consensus 264 l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~ 343 (472)
+++||+++ | .++.|++|+ |++||.+++++++ +.++++++.|||||++++|+
T Consensus 197 v~avR~av---g--~d~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~i~~iE~P~~~~~~ 247 (393)
T 2og9_A 197 VTAVRKHL---G--DAVPLMVDA-----------------------NQQWDRPTAQRMC-RIFEPFNLVWIEEPLDAYDH 247 (393)
T ss_dssp HHHHHHHH---C--TTSCEEEEC-----------------------TTCCCHHHHHHHH-HHHGGGCCSCEECCSCTTCH
T ss_pred HHHHHHHc---C--CCCEEEEEC-----------------------CCCCCHHHHHHHH-HHHHhhCCCEEECCCCcccH
Confidence 55555555 3 279999999 3567889999885 55899999999999999999
Q ss_pred HHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHH
Q 012041 344 SSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFI 423 (472)
Q Consensus 344 ~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~ 423 (472)
+++++|++++++||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++| +|.+.+ ..
T Consensus 248 ~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~-~h~~~~----~~ 321 (393)
T 2og9_A 248 EGHAALALQFDTPIATGEM-LTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLA-PHFAME----LH 321 (393)
T ss_dssp HHHHHHHHHCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCSCHH----HH
T ss_pred HHHHHHHHhCCCCEEeCCC-cCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEe-ccCccH----HH
Confidence 9999999999999999997 67899999999999999999999999999999999999999999986 564443 46
Q ss_pred HHHHHhhcC
Q 012041 424 ADLSVGLAS 432 (472)
Q Consensus 424 a~lAva~~~ 432 (472)
+||++++..
T Consensus 322 ~~laaa~~~ 330 (393)
T 2og9_A 322 VHLAAAYPR 330 (393)
T ss_dssp HHHHHTSSS
T ss_pred HHHHhhCCC
Confidence 788877643
No 100
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=100.00 E-value=6.3e-44 Score=364.15 Aligned_cols=296 Identities=16% Similarity=0.203 Sum_probs=224.6
Q ss_pred CceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.+. ++.+ +++++|+|+|| |+ +||||+.+ +.+++. ++..
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~----------~G~Ge~~~--------~~~~~~-~~~~ 63 (359)
T 1mdl_A 3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGV----------VGHSYLFA--------YTPVAL-KSLK 63 (359)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEEEC--------SSGGGH-HHHH
T ss_pred CCEEEEEEEEEEEcCCCCCccccccccccccEEEEEEEeCCCC----------EEEEEeec--------CCCchH-HHHH
Confidence 4999999998773 2332 34699999999 99 89999864 224444 6667
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeE
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPA 189 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~ 189 (472)
.|++.++|.|+|+||.+++.+ +.|.+........++..+|++|||+||||+.||.+|+|||+||| |. ++++|+
T Consensus 64 ~i~~~l~~~l~g~d~~~~~~~-~~l~~~~~~~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llG---g~-~~~vp~-- 136 (359)
T 1mdl_A 64 QLLDDMAAMIVNEPLAPVSLE-AMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLG---AN-ARPVQA-- 136 (359)
T ss_dssp HHHHHHHHHHTTSBSCHHHHH-HHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CC-CCCEEE--
T ss_pred HHHHHHHHHHCCCCccchHHH-HHHHHHHHhhccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhC---CC-CCCeee--
Confidence 788789999999999999999 88865321111112346899999999999999999999999999 87 456776
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHH
Q 012041 190 FNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTD 269 (472)
Q Consensus 190 ~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~ 269 (472)
|+++ |. .+.+ +..+++.+...+||+.+| .|.|. .+++.+.+.++.+|+
T Consensus 137 ~~~~--g~-----~~~~---------~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~~~e~v~avr~ 184 (359)
T 1mdl_A 137 YDSH--SL-----DGVK---------LATERAVTAAELGFRAVK----TRIGY------------PALDQDLAVVRSIRQ 184 (359)
T ss_dssp EEEC--CS-----CHHH---------HHHHHHHHHHHTTCSEEE----EECCC------------SSHHHHHHHHHHHHH
T ss_pred eeec--CC-----CCHH---------HHHHHHHHHHHcCCCEEE----EecCC------------CCHHHHHHHHHHHHH
Confidence 5442 21 0111 223455555556676554 45431 112223455555555
Q ss_pred HHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 270 AIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 270 av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
++ | .++.|++|+ |++|+.+++++++ +.++++++.|||||++++|++++++|
T Consensus 185 a~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~i~~iE~P~~~~~~~~~~~l 235 (359)
T 1mdl_A 185 AV---G--DDFGIMVDY-----------------------NQSLDVPAAIKRS-QALQQEGVTWIEEPTLQHDYEGHQRI 235 (359)
T ss_dssp HH---C--SSSEEEEEC-----------------------TTCSCHHHHHHHH-HHHHHHTCSCEECCSCTTCHHHHHHH
T ss_pred Hh---C--CCCEEEEEC-----------------------CCCCCHHHHHHHH-HHHHHhCCCeEECCCChhhHHHHHHH
Confidence 54 3 279999999 3567889999884 55899999999999999999999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHh
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVG 429 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva 429 (472)
++++++||++||+ ++++++++++++.+++|+++||++++||+|++++++++|+++|+++|+++ + ++ +++|++++
T Consensus 236 ~~~~~iPI~~de~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~-~-~~---a~~~laaa 309 (359)
T 1mdl_A 236 QSKLNVPVQMGEN-WLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHL-F-QE---ISAHLLAA 309 (359)
T ss_dssp HHTCSSCEEECTT-CCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS-C-HH---HHHHHHHT
T ss_pred HHhCCCCEEeCCC-CCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeecc-H-HH---HHHHHHHh
Confidence 9999999999997 57799999999999999999999999999999999999999999987654 3 22 66777776
Q ss_pred hc
Q 012041 430 LA 431 (472)
Q Consensus 430 ~~ 431 (472)
+.
T Consensus 310 ~~ 311 (359)
T 1mdl_A 310 TP 311 (359)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 101
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=100.00 E-value=7.1e-44 Score=372.66 Aligned_cols=312 Identities=12% Similarity=0.092 Sum_probs=222.8
Q ss_pred CceEEEEEEEEEec--CCC-------C---CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQIID--SRG-------N---PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~~--~~~-------~---~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.|.. +.. . ..++|+|+|| |+ +||||+. .++ .+.+
T Consensus 4 ~~~It~v~~~~v~~~d~~~~~~~g~~~~~~~~~iV~v~td~Gi----------~G~GE~~----------~~~---~v~~ 60 (450)
T 3mzn_A 4 FPKITKMNVVPVAGEDGFLLNLSGGHEPWFIRCVLVLEDESGN----------RGVGEIP----------SSE---GILN 60 (450)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSC----------EEEEEEE----------CCH---HHHH
T ss_pred CCEEEEEEEEEecccCccccccccCCCCcceEEEEEEEECCCC----------EEEEeCC----------CcH---HHHH
Confidence 48999999999952 211 1 2479999999 99 8999973 122 3344
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHh-cCC--CCCC------ccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcC-
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEI-DGT--PNKS------KIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSG- 179 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~-~~~--~~~~------~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G- 179 (472)
.|+ .++|.|+|+||.+++++|+.|++. ... ...+ ++..+|++|||+||||++||.+|+|||+||| |
T Consensus 61 ~i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~g~~G~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---~~ 136 (450)
T 3mzn_A 61 GLE-KCRSLVEGARVNEVKQVLSRARGLLAQGGPEERGRQTFDLRVAVHVITAIESALFDLFGQALGMPVADLLG---QY 136 (450)
T ss_dssp HHH-HTHHHHTTCBGGGHHHHHHHHHHHHGGGCCCCCCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTCBGGGGST---TT
T ss_pred HHH-HHHHHhCCCChhhHHHHHHHHHHHhhcccCCCcccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC
Confidence 464 489999999999999999999863 111 1111 1336899999999999999999999999999 7
Q ss_pred -CCcceeeeeEEEeecCCccCCCcccccce------e------eccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCcc
Q 012041 180 -TKELVMPVPAFNVINGGSHAGNNLAMQEF------M------ILPVGATSFAEALRMGS-EVYHILKGIIKEKYGQDAC 245 (472)
Q Consensus 180 -~~~~~vp~~~~~~~~gg~~~~~~l~~~e~------~------~~p~~~~~~~~a~~~~~-~~~~~lk~~lk~k~G~~~~ 245 (472)
+.++++|++.+....|... ...+.+... . -...+++.++++.+... +||+++| .|+|.
T Consensus 137 G~~r~~v~~y~~~~~~gd~~-~t~~~~~s~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~--- 208 (450)
T 3mzn_A 137 GRQRDEVEALGYLFLLGDPD-KTDLPYPRVADPVDAWDEVRYREAMTPEAVANLARAAYDRYGFKDFK----LKGGV--- 208 (450)
T ss_dssp CCCCSEEEBCEEEECBCCGG-GSSSCCCCCSSCCSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEE----EECSS---
T ss_pred CCcCceEEeeeeeccccccc-cccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEE----ECCCC---
Confidence 3567888854432111100 000000000 0 00011233445555454 4776654 56542
Q ss_pred cCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHH
Q 012041 246 NVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEF 325 (472)
Q Consensus 246 ~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~ 325 (472)
.+ ..++++.++. +|+++ +++.|++|+ |+.||.++|+++ .+.
T Consensus 209 ---------~~---~~~Di~~v~a-vRea~--pd~~L~vDa-----------------------N~~w~~~~A~~~-~~~ 249 (450)
T 3mzn_A 209 ---------LR---GEEEADCIRA-LHEAF--PEARLALDP-----------------------NGAWKLDEAVRV-LEP 249 (450)
T ss_dssp ---------SC---HHHHHHHHHH-HHHHC--TTSEEEEEC-----------------------TTCBCHHHHHHH-HGG
T ss_pred ---------CC---HHHHHHHHHH-HHHhC--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHH
Confidence 11 1334444433 33332 589999999 466889999987 566
Q ss_pred HhhCCeeEEeCCCCcCC----HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHH
Q 012041 326 VRDFPIVSIEDPFDQDD----WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALD 401 (472)
Q Consensus 326 l~~~~l~~iEdP~~~~D----~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~ 401 (472)
++++ +.|||||++++| ++++++|++++++||++||+ +++.++++++++.+++|++|+|+ ++||||++++++++
T Consensus 250 L~~~-i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~kia~l 326 (450)
T 3mzn_A 250 IKHL-LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMI-ATDYKQLQYAVQLNSVDIPLADC-HFWTMQGAVAVGEL 326 (450)
T ss_dssp GGGG-CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSS-SSSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHHHHHHH
T ss_pred hhhc-cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCc-cCCHHHHHHHHHcCCCCEEEecC-ccCCHHHHHHHHHH
Confidence 8999 999999999999 79999999999999999996 68889999999999999999999 79999999999999
Q ss_pred HHHcCCcEEecCCCCCChhhHHHHHHHhhcC
Q 012041 402 SKSAGWGVMVSHRSGETEDNFIADLSVGLAS 432 (472)
Q Consensus 402 A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~ 432 (472)
|+++|+++ .+|.+.|+.++.++.++++...
T Consensus 327 A~a~gv~~-~~h~~~~~~I~~aA~~hlaaa~ 356 (450)
T 3mzn_A 327 CNEWGMTW-GSHSNNHFDISLAMMTHVAAAC 356 (450)
T ss_dssp HHHTTCCC-BCCCCSCCHHHHHHHHHHHHTC
T ss_pred HHHcCCEE-EecCCcccHHHHHHHHHHHHhC
Confidence 99999996 5777778877765544444433
No 102
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=100.00 E-value=7.5e-44 Score=373.85 Aligned_cols=310 Identities=16% Similarity=0.101 Sum_probs=221.0
Q ss_pred CceEEEEEEEEEecC--CC-------C---CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQIIDS--RG-------N---PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~~~--~~-------~---~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|||++|+++.|..+ .. . ..++|+|+|| |+ +||||+. .++ .+..
T Consensus 7 ~~~It~i~~~~v~~~d~~~~~~~g~h~p~~~~~~V~i~td~Gi----------~G~GE~~----------~~~---~v~~ 63 (470)
T 3p0w_A 7 TPRVTEMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGR----------TGVGEVP----------GGE---GIRQ 63 (470)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSC----------EEEEEEE----------CCH---HHHH
T ss_pred CCeEEEEEEEEecCCCcccccccccCCCcceEEEEEEEECCCC----------EEEEeCC----------ChH---HHHH
Confidence 399999999999522 11 2 2589999999 99 8999963 122 3344
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHHhcC-CCCCC-------------cc---c--------hhHHHHHHHHHHHHHHh
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLEIDG-TPNKS-------------KI---G--------ANAILGVSLSVCRAGAG 164 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~~~~-~~~~~-------------~~---g--------~~A~sAvd~ALwD~~ak 164 (472)
.|++ ++|.|+|+||.+++.+|+.|++... ..+++ .. | .+|++|||+||||++||
T Consensus 64 ~i~~-l~p~LiG~d~~~ie~i~~~~~~~~~~~~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~ALWDl~gK 142 (470)
T 3p0w_A 64 ALER-VIPLVVGQSIGRTNGVLSSIRRALAGGGNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALLDLLGQ 142 (470)
T ss_dssp HHHH-TGGGTTTCBGGGHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhCCCChhhHHHHHHHHHHHHhhcCCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 5654 8999999999999999999987321 11111 00 1 27999999999999999
Q ss_pred hcCCchHHHhhhhcC-CCcceeeeeEEEeecCCccCCCcccccce------e------eccCCcccHHHHHHHHH-HHHH
Q 012041 165 AKGVPLYKHIQELSG-TKELVMPVPAFNVINGGSHAGNNLAMQEF------M------ILPVGATSFAEALRMGS-EVYH 230 (472)
Q Consensus 165 ~~g~Pl~~lLG~~~G-~~~~~vp~~~~~~~~gg~~~~~~l~~~e~------~------~~p~~~~~~~~a~~~~~-~~~~ 230 (472)
.+|+|||+||| | +.++++|++.+....|... ...+.+... . -...+++.++++.+... +||+
T Consensus 143 ~~g~Pv~~LLG---gG~~r~~v~~y~~~~~~gd~~-~t~~~~~~~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~ 218 (470)
T 3p0w_A 143 FLEVPVAELLG---AGQQRDSAPMLAYLFYVGDRR-KTDLPYLEGANGADDWLRLRHEAAMTPAAIARLAEAATERYGFA 218 (470)
T ss_dssp HHTSBGGGTST---TSCCCSEEEBCEEECCBCCGG-GSCSCCCCCCTTCCHHHHHTTSCBCSHHHHHHHHHHHHHHHCCS
T ss_pred HcCCcHHHHhC---CCCCCCeEEEeeeeccccccc-cccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999 6 5677888854322111100 000000000 0 00011233455555555 4776
Q ss_pred HHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCC
Q 012041 231 ILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGA 310 (472)
Q Consensus 231 ~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n 310 (472)
++| .|+|. .+ ..++++.++. +|++. +++.|++|+ |
T Consensus 219 ~~K----lKvG~------------~~---~~~Di~rv~a-vRea~--pd~~L~vDa-----------------------N 253 (470)
T 3p0w_A 219 DFK----LKGGV------------MP---GAEEMEAIAA-IKARF--PHARVTLDP-----------------------N 253 (470)
T ss_dssp EEE----EECSS------------SC---HHHHHHHHHH-HHHHC--TTSEEEEEC-----------------------T
T ss_pred EEE----EeCCC------------CC---HHHHHHHHHH-HHHhC--CCCeEEeeC-----------------------C
Confidence 665 56542 11 1334444433 33332 589999999 4
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEeCCCCcCC----HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDD----WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D----~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
+.||.++|+++ .+.++++ +.|||||++++| ++++++|++++++||++||+ +++.++++++++.+++|++|+|+
T Consensus 254 ~~w~~~~Ai~~-~~~Le~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~a~div~~d~ 330 (470)
T 3p0w_A 254 GAWSLNEAIAL-CKGQGHL-VAYAEDPCGPEAGYSGREVMAEFKRATGIPTATNMI-ATDWRQMGHAVQLHAVDIPLADP 330 (470)
T ss_dssp TBBCHHHHHHH-HTTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSS-SCSHHHHHHHHHTTCCSEEBCCH
T ss_pred CCCCHHHHHHH-HHhcccc-ceeecCCCChhhccchHHHHHHHHhcCCCCEEeCCc-cCCHHHHHHHHHcCCCCEEEecC
Confidence 66889999987 5668999 999999999999 79999999999999999996 67889999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 387 NQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 387 ~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
++||||++++++++|+++|+++ .+|.+.|+.++.++.++++.
T Consensus 331 -~~GGit~a~kia~lA~a~gv~~-~~h~~~e~~I~~aA~~hlaa 372 (470)
T 3p0w_A 331 -HFWTMQGSVRVAQLCDEWGLTW-GSHSNNHFDVSLAMFTHVAA 372 (470)
T ss_dssp -HHHCHHHHHHHHHHHHHHTCCC-BCCCCSCCHHHHHHHHHHHH
T ss_pred -ccCCHHHHHHHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHH
Confidence 8999999999999999999996 57777788776554444443
No 103
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=100.00 E-value=1.2e-43 Score=371.48 Aligned_cols=310 Identities=17% Similarity=0.123 Sum_probs=219.3
Q ss_pred CceEEEEEEEEEe--cCCC-------C---CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 43 SAKVKSVKARQII--DSRG-------N---PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 43 ~m~I~~V~~~~v~--~~~~-------~---~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
.|+|++|+++.|. |+.. . ..++|+|+|| |+ +||||+. .++ .+.+
T Consensus 8 ~~~It~v~v~~v~~~d~~~~~~~g~h~~~~~~~iV~v~td~Gi----------~G~GE~~----------~~~---~v~~ 64 (455)
T 3pfr_A 8 VPVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGH----------TGVGEAP----------GGA---TIEN 64 (455)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSC----------EEEEEEE----------CSH---HHHH
T ss_pred CCEEEEEEEEEeccCCccccccccCCCCcceEEEEEEEECCCC----------EEEEeCC----------CcH---HHHH
Confidence 3999999999995 2211 1 2479999999 99 8999973 122 2334
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHHHHH--hcCCCCCCccc-------hhHHHHHHHHHHHHHHhhcCCchHHHhhhhcC-
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAIMLE--IDGTPNKSKIG-------ANAILGVSLSVCRAGAGAKGVPLYKHIQELSG- 179 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~l~~--~~~~~~~~~~g-------~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G- 179 (472)
.|+ .++|.|+|+||.+++++|+.|++ .-.....++.| .+|++|||+||||++||.+|+|||+||| |
T Consensus 65 ~i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~~~g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLG---gG 140 (455)
T 3pfr_A 65 ALT-EAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLG---PG 140 (455)
T ss_dssp HHH-HHGGGTTTCBGGGHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGST---TS
T ss_pred HHH-HHHHHhcCCChhHHHHHHHHHHhhccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC
Confidence 454 58999999999999999999985 21100001111 5799999999999999999999999999 6
Q ss_pred CCcceeeeeEEEeecCCccCCCccccc-ce------e-----eccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCccc
Q 012041 180 TKELVMPVPAFNVINGGSHAGNNLAMQ-EF------M-----ILPVGATSFAEALRMGS-EVYHILKGIIKEKYGQDACN 246 (472)
Q Consensus 180 ~~~~~vp~~~~~~~~gg~~~~~~l~~~-e~------~-----~~p~~~~~~~~a~~~~~-~~~~~lk~~lk~k~G~~~~~ 246 (472)
+.++++|++.+....|... ...+... .. + ....+++.++++.+... +||+++| .|+|.
T Consensus 141 ~~r~~v~~y~~~~~~gd~~-~~~~~~~~s~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~---- 211 (455)
T 3pfr_A 141 KQRDEVTVLGYLFYVGDDK-ITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFK----LKGGV---- 211 (455)
T ss_dssp CCCSEEEBCEEECCBCCGG-GSCSCCCCCCCSSCTHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCEE----EECSS----
T ss_pred CcCCeEEEeeeeccccccc-cccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEE----EcCCC----
Confidence 5677888854432111100 0000000 00 0 00011233444544444 4776654 56541
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHH
Q 012041 247 VGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFV 326 (472)
Q Consensus 247 ~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l 326 (472)
.+ ..++++.++. +|++. +++.|++|+ |+.||.++|+++ .+.+
T Consensus 212 --------~~---~~~Di~~v~a-vRea~--pd~~L~vDa-----------------------N~~w~~~~A~~~-~~~L 253 (455)
T 3pfr_A 212 --------FE---GSKEIDTVIE-LKKHF--PDARITLDP-----------------------NGCWSLDEAIQL-CKGL 253 (455)
T ss_dssp --------SC---HHHHHHHHHH-HHHHC--TTCCEEEEC-----------------------TTBSCHHHHHHH-HTTC
T ss_pred --------CC---HHHHHHHHHH-HHHhC--CCCeEeecC-----------------------CCCCCHHHHHHH-HHhh
Confidence 11 1334444433 33332 589999999 467889999987 5668
Q ss_pred hhCCeeEEeCCCCcCC----HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHH
Q 012041 327 RDFPIVSIEDPFDQDD----WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDS 402 (472)
Q Consensus 327 ~~~~l~~iEdP~~~~D----~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A 402 (472)
+++ +.|||||++++| +++|++|++++++||++||+ +++.++++++++.+++|++|+|+ ++||||++++++++|
T Consensus 254 ~~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~kia~lA 330 (455)
T 3pfr_A 254 NDV-LTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMI-ATNWREMCHAIMLQSVDIPLADP-HFWTLTGASRVAQLC 330 (455)
T ss_dssp TTT-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSS-CCSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHHHHHHHH
T ss_pred ccc-ceeeecCCChhhccchHHHHHHHHhcCCCCEEeCCC-cCCHHHHHHHHHcCCCCEEEecC-CcCCHHHHHHHHHHH
Confidence 999 999999999999 79999999999999999996 68889999999999999999999 799999999999999
Q ss_pred HHcCCcEEecCCCCCChhhHH--HHHHHhh
Q 012041 403 KSAGWGVMVSHRSGETEDNFI--ADLSVGL 430 (472)
Q Consensus 403 ~a~g~~~~v~~~~~Et~~s~~--a~lAva~ 430 (472)
+++|+++ .+|.+.|+.++.+ +||++++
T Consensus 331 ~a~gv~~-~~h~~~~~~i~~aa~~hlaaa~ 359 (455)
T 3pfr_A 331 NEWGLTW-GCHSNNHFDISLAMFSHVGAAA 359 (455)
T ss_dssp HHTTCCC-BCCCCSCCHHHHHHHHHHHHHC
T ss_pred HHcCCEE-EecCCcccHHHHHHHHHHHHhC
Confidence 9999996 5777778877654 5555554
No 104
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-43 Score=364.97 Aligned_cols=297 Identities=18% Similarity=0.201 Sum_probs=224.3
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcc-hHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGK-GVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~-~~~~a~~ 109 (472)
|||++|+++.+. .+.+ +++++|+|+|| |+ +||||+. +++ +. +..
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~Ge~~----------~~~~~~--~~~ 61 (384)
T 2pgw_A 4 VKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGT----------VGIGECT----------VAPDQT--GTA 61 (384)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSC----------EEEEEEE----------CTTCHH--HHH
T ss_pred CEEEEEEEEEEecccCccceeccceeeeceEEEEEEEECCCC----------EEEEccC----------CCchHH--HHH
Confidence 899999998772 2322 35799999999 99 8999984 122 22 556
Q ss_pred HHHHhhhhcccCCCCCCHHHHHHH-HHHhcCCCCCCc---c-chhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcce
Q 012041 110 NINDILGPKLVGVDIRDQAEVDAI-MLEIDGTPNKSK---I-GANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELV 184 (472)
Q Consensus 110 ~i~~~lap~LiG~d~~d~e~i~~~-l~~~~~~~~~~~---~-g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~ 184 (472)
.|++.++|.|+|+||.+++.+|+. |++- +.+.+. . ..+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 62 ~i~~~l~~~l~g~d~~~~~~~~~~~l~~~--~~~~g~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~ 136 (384)
T 2pgw_A 62 AILYRLAKHLVGHSPHDVAPLIARIFHQE--YLGHGANIMRAANQIFSGIDMAMWDLQGKLAGLPVHQLLG---GAHRKA 136 (384)
T ss_dssp HHHHHHHGGGTTSCGGGHHHHHHHHHHHH--TGGGTCCCHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCSSSE
T ss_pred HHHHHHHHHHCCCChhHHHHHHHHHHHHH--hhhcccccccccHHHHHHHHHHHHHHHHhHcCCCHHHHcC---CCCCCc
Confidence 677789999999999999999998 8531 111111 1 35899999999999999999999999999 976667
Q ss_pred eeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHH
Q 012041 185 MPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGL 264 (472)
Q Consensus 185 vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l 264 (472)
+|+ |.+++++ +.+ +..+++.+...+||+.+| .|+| + + ....+
T Consensus 137 v~~--~~~~~~~-------~~e---------~~~~~a~~~~~~Gf~~iK----ik~g----------~---~---~~~~~ 178 (384)
T 2pgw_A 137 VGY--FYFLQGE-------TAE---------ELARDAAVGHAQGERVFY----LKVG----------R---G---EKLDL 178 (384)
T ss_dssp EEB--CEECCCS-------SHH---------HHHHHHHHHHHTTCCEEE----EECC----------S---C---HHHHH
T ss_pred eEE--EEECCCC-------CHH---------HHHHHHHHHHHcCCCEEE----ECcC----------C---C---HHHHH
Confidence 776 4443221 111 224455555555665554 4433 1 1 12334
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHH
Q 012041 265 VLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWS 344 (472)
Q Consensus 265 ~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~ 344 (472)
+.++...+.. |++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++
T Consensus 179 e~v~avr~a~---gd~~l~vD~-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~~~~ 231 (384)
T 2pgw_A 179 EITAAVRGEI---GDARLRLDA-----------------------NEGWSVHDAINM-CRKLEKYDIEFIEQPTVSWSIP 231 (384)
T ss_dssp HHHHHHHTTS---TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSEEECCSCTTCHH
T ss_pred HHHHHHHHHc---CCcEEEEec-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEeCCCChhhHH
Confidence 4433332223 478899999 356788999988 5678999999999999999999
Q ss_pred HHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHH
Q 012041 345 SWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIA 424 (472)
Q Consensus 345 ~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a 424 (472)
++++|++++++||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|+++++++ +.|+.++.++
T Consensus 232 ~~~~l~~~~~iPI~~de~-i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~aa 309 (384)
T 2pgw_A 232 AMAHVREKVGIPIVADQA-AFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS-SFTTGITTCA 309 (384)
T ss_dssp HHHHHHHHCSSCEEESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC-CSCCHHHHHH
T ss_pred HHHHHHhhCCCCEEEeCC-cCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc-CcCCHHHHHH
Confidence 999999999999999997 67899999999999999999999999999999999999999999987655 5799887655
Q ss_pred HHHHhhcCCC
Q 012041 425 DLSVGLASGQ 434 (472)
Q Consensus 425 ~lAva~~~~~ 434 (472)
.++++...+.
T Consensus 310 ~~hlaaa~~~ 319 (384)
T 2pgw_A 310 EHHIGLAIPN 319 (384)
T ss_dssp HHHHHHHCSS
T ss_pred HHHHHHhCCC
Confidence 5555443333
No 105
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=100.00 E-value=2.6e-43 Score=370.16 Aligned_cols=317 Identities=15% Similarity=0.130 Sum_probs=217.5
Q ss_pred hhhcCC-C-ceEEEEEEEEEe--cC-----C--CCCe---EEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCc
Q 012041 37 ASTASS-S-AKVKSVKARQII--DS-----R--GNPT---VEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGG 101 (472)
Q Consensus 37 ~~~~~~-~-m~I~~V~~~~v~--~~-----~--~~~~---v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g 101 (472)
--||++ + ++|+++++.+|. |+ . ..|+ .+|+|+|| |+ +||||+ |++
T Consensus 17 ~~~~~~~~~p~i~~~~v~pva~~d~~l~~~~g~h~p~f~RtiV~v~Td~Gi----------~G~GE~----------~g~ 76 (464)
T 4g8t_A 17 NLYFQSMSTPIITEMQVIPVAGHDSMLLNLSGAHSPYFTRNIVILKDNSGN----------TGVGEV----------PGG 76 (464)
T ss_dssp -------CCCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSC----------EEEEEE----------ECC
T ss_pred ceeeeccCCCEEeEEEEEEecCCCcccccCCcccCCccceEEEEEEECCCC----------EEEEeC----------CCc
Confidence 356666 3 899999999993 33 2 2332 47999999 99 899996 333
Q ss_pred chHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcC-CCCC--------CccchhHHHHHHHHHHHHHHhhcCCchHH
Q 012041 102 KGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDG-TPNK--------SKIGANAILGVSLSVCRAGAGAKGVPLYK 172 (472)
Q Consensus 102 ~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~-~~~~--------~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~ 172 (472)
+.+ .+.|+ .++|.|+|+||.+++.+|+.|++... .... .....+|+||||+||||++||.+|+|||+
T Consensus 77 ~~~---~~~le-~~~p~liG~dp~~ie~i~~~l~~~~~~~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~ 152 (464)
T 4g8t_A 77 EKI---RQTLE-DAKPLVIGKTLGEYKNVMNTVRQTFNDHDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVTVAS 152 (464)
T ss_dssp HHH---HHHHH-HHGGGTTTCBGGGHHHHHHHHHHHTTTSCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSBTGG
T ss_pred HHH---HHHHH-HHHHHHcCCCHHHHHHHHHHHHHHhhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 333 33454 58999999999999999999986321 1111 11234699999999999999999999999
Q ss_pred HhhhhcCCCcceeeeeEEEeecCCccCCCcccc--------------cceeeccCCcccHHHHHHHHH-HHHHHHHHHHH
Q 012041 173 HIQELSGTKELVMPVPAFNVINGGSHAGNNLAM--------------QEFMILPVGATSFAEALRMGS-EVYHILKGIIK 237 (472)
Q Consensus 173 lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~--------------~e~~~~p~~~~~~~~a~~~~~-~~~~~lk~~lk 237 (472)
|||. |+.|+++|++.+....+.... ..+.. .+... .+.+.++++.+... .||+++|
T Consensus 153 LLGg--G~~Rd~V~~y~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Gf~~~K---- 223 (464)
T 4g8t_A 153 LLGD--GQQRDAVEMLGYLFFIGDRKK-TTLAYQNQENDPCDWYRVRHEEAM--TPESVVRLAEAAYEKYGFNDFK---- 223 (464)
T ss_dssp GSTT--SCCCSEEEBCEEECCBCCGGG-SCSCCCCCTTCSSHHHHHTTSCBC--SHHHHHHHHHHHHHHHCCSCEE----
T ss_pred HhCC--CCCCceEEEEEEeeccCcccc-cchhhhcccccccchhhhcccccC--CHHHHHHHHHHHHHHcCCCeEE----
Confidence 9982 367888998665433221100 00000 00000 00111222222211 2444333
Q ss_pred hhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHH
Q 012041 238 EKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQS 317 (472)
Q Consensus 238 ~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~e 317 (472)
.|+|. . +..+.++.++...+.. |++.|++|+ |+.||.++
T Consensus 224 lKvG~------------~---~~~~di~~v~avrea~---pd~~L~vDa-----------------------N~~wt~~~ 262 (464)
T 4g8t_A 224 LKGGV------------L---DGFEEAEAVTALAKRF---PDARITLDP-----------------------NGAWSLDE 262 (464)
T ss_dssp EECSS------------S---CHHHHHHHHHHHHHHS---TTCCEEEEC-----------------------TTCBCHHH
T ss_pred EeCCC------------C---CHHHHHHHHHHHHhhC---CCceEEEEC-----------------------CCccCHHH
Confidence 45431 1 1234455544333333 588999999 46688999
Q ss_pred HHHHHHHHHhhCCeeEEeCCCCcCCH----HHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHH
Q 012041 318 LGDLYKEFVRDFPIVSIEDPFDQDDW----SSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVT 393 (472)
Q Consensus 318 ai~~~~~~l~~~~l~~iEdP~~~~D~----~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGit 393 (472)
|+++ .+.++++ +.|||||++++|. +.+++|++++++||++||+ ++++++++++++.+++|++|+| +++||||
T Consensus 263 Ai~~-~~~le~~-l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~-~~~~~~~~~~i~~~avdi~~~d-~~~GGit 338 (464)
T 4g8t_A 263 AVKI-GKQLKGV-LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMI-ATDWRQMGHTISLQSVDIPLAD-PHFWTMQ 338 (464)
T ss_dssp HHHH-HHHTTTT-CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSS-SCSHHHHHHHHHHTCCSEEBCC-HHHHCHH
T ss_pred HHHH-HHHhhhc-cceeecCcCcccccchHHHHHhhhccCCCCcccccc-ccchhhHHHHHHhhCCCEEecc-ccccchH
Confidence 9987 5668888 9999999999885 7889999999999999997 6789999999999999999999 5899999
Q ss_pred HHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcC
Q 012041 394 ESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLAS 432 (472)
Q Consensus 394 ea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~ 432 (472)
++++|+++|+++|++++ .|.+.++.++.++.++++...
T Consensus 339 ~~~kia~lA~~~gi~v~-~h~~~~~~I~laA~~hlaaa~ 376 (464)
T 4g8t_A 339 GSIRVAQMCHEWGLTWG-SHSNNHFDISLAMFTHVAAAA 376 (464)
T ss_dssp HHHHHHHHHHHHTCCCB-CCCCSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCEEE-EcCCcccHHHHHHHHHHHHhC
Confidence 99999999999999975 565678887766655555433
No 106
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=100.00 E-value=5.5e-43 Score=362.41 Aligned_cols=272 Identities=15% Similarity=0.136 Sum_probs=207.8
Q ss_pred CeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcC
Q 012041 61 PTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDG 139 (472)
Q Consensus 61 ~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~ 139 (472)
.+|+|+|+|| |+ +||||+.. + +.++..+++.|+|.|+|+||.+++.+|+.|.+...
T Consensus 70 ~~v~V~v~td~G~----------~G~GE~~~----------g---~~~~~~v~~~l~p~LiG~d~~~~~~i~~~m~~~~~ 126 (415)
T 2p3z_A 70 GTLIVEVEAENRQ----------TGFAVSTA----------G---EMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATM 126 (415)
T ss_dssp CEEEEEEEETTSC----------EEEEEEEC----------H---HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHT
T ss_pred eEEEEEEEECCCC----------EEEEEecC----------C---HHHHHHHHHHHHHHHCCCChhhHHHHHHHHHHhhh
Confidence 3689999999 99 89999731 2 23344567889999999999999999999986432
Q ss_pred -CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccH
Q 012041 140 -TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSF 218 (472)
Q Consensus 140 -~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~ 218 (472)
..+.++++.+|++|||+||||+.||.+|+|||+||| |..++++|+ |++ |+ + .
T Consensus 127 ~~~g~~~~~~~A~said~ALwDl~ak~~g~Pl~~lLG---G~~~~~vp~--y~~--g~-------~-------------~ 179 (415)
T 2p3z_A 127 YYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLG---GAVRDEIQF--YAT--GA-------R-------------P 179 (415)
T ss_dssp TTSTTSSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSSSEEEE--EEE--SS-------C-------------H
T ss_pred cccCCCcchHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCceee--eec--CC-------C-------------H
Confidence 212334566899999999999999999999999999 976667775 543 22 0 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcce
Q 012041 219 AEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNY 298 (472)
Q Consensus 219 ~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y 298 (472)
+++. .+||+++| .|+| .++++++. +++.+.+.++++|+++ | .++.|++|+
T Consensus 180 ~~~~---~~G~~~~K----iK~g-----~g~~~G~~-~~~~d~~~v~avrea~---G--~~~~L~vDa------------ 229 (415)
T 2p3z_A 180 DLAK---EMGFIGGK----MPTH-----WGPHDGDA-GIRKDAAMVADMREKC---G--PDFWLMLDC------------ 229 (415)
T ss_dssp HHHH---HHTCSEEE----EECC-----CCGGGHHH-HHHHHHHHHHHHHHHH---C--SSSEEEEEC------------
T ss_pred HHHH---HhCcceEE----Eecc-----cCcccccc-cHHHHHHHHHHHHHHh---C--CCCEEEEEC------------
Confidence 1222 24576665 4543 12222221 1222344555555544 3 289999999
Q ss_pred eecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC--CeEEeCCccccCHHHHHHHHHc
Q 012041 299 DLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD--IQLVGDDLLVTNPKRIAEAIQK 376 (472)
Q Consensus 299 ~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~--~pI~~dE~~~~~~~~~~~~i~~ 376 (472)
|+.|+.++|++++. .+++|++.|||||++++|+++|++|+++++ +||++||++ .++++++++++.
T Consensus 230 -----------N~~~~~~~Ai~~~~-~l~~~~i~~iEqPl~~~d~~~~~~l~~~~~~~ipIa~dE~~-~~~~~~~~~i~~ 296 (415)
T 2p3z_A 230 -----------WMSQDVNYATKLAH-ACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHH-GTLQSFRTLAET 296 (415)
T ss_dssp -----------TTCCCHHHHHHHHH-HHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTC-CSHHHHHHHHHT
T ss_pred -----------CCCCCHHHHHHHHH-HHhhcCCceEeCCCCcchHHHHHHHHHhcCCCCcEEcCCCC-CCHHHHHHHHHc
Confidence 35678899999865 489999999999999999999999999998 999999974 679999999999
Q ss_pred CCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhc
Q 012041 377 KSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLA 431 (472)
Q Consensus 377 ~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~ 431 (472)
+ +|++|||++++||||++++++++|+++|+++|+ |.+ ....+|++.++.
T Consensus 297 ~-~d~i~ik~~~~GGitea~~ia~lA~~~gi~v~~-h~~----~~a~~hlaaa~p 345 (415)
T 2p3z_A 297 G-IDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVP-HGS----SVYSHHAVITFT 345 (415)
T ss_dssp T-CSEECCCHHHHTCHHHHHHHHHHHHHTTCCBCC-CCC----HHHHHHHHTTCT
T ss_pred C-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cCh----HHHHHHHHHhCC
Confidence 9 999999999999999999999999999999865 643 234567776654
No 107
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=100.00 E-value=3.2e-43 Score=355.76 Aligned_cols=274 Identities=19% Similarity=0.227 Sum_probs=208.2
Q ss_pred CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCC-CCCCHHHHHHHHHHh
Q 012041 60 NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGV-DIRDQAEVDAIMLEI 137 (472)
Q Consensus 60 ~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~-d~~d~e~i~~~l~~~ 137 (472)
+..++|+| || |+ +||||+.+++ |.+++.+++.+.+++ +. |+|+ ||.+++++|+.|++.
T Consensus 26 ~~~~~V~v-td~G~----------~G~GE~~~~~------~~ge~~~~~~~~l~~-~~--l~g~~d~~~~e~~~~~l~~~ 85 (338)
T 3ijl_A 26 TPDVQVEI-EYEGV----------TGYGEASMPP------YLGETVESVMNFLKK-VN--LEQFSDPFQLEDILSYVDSL 85 (338)
T ss_dssp ECEEEEEE-EETTE----------EEEEEEECCG------GGSCCHHHHHHHHTT-CC--CTTCCCTTCHHHHHHHHHHT
T ss_pred eeEEEEEE-EeCCc----------EEEEeeeCCC------CCCCCHHHHHHHHHH-HH--hcCCCCccCHHHHHHHHHHh
Confidence 46799999 78 99 8999997532 455667666655543 22 8999 999999999999863
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCccc
Q 012041 138 DGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATS 217 (472)
Q Consensus 138 ~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~ 217 (472)
. ....+|++||||||||+.||.+|+|||+||| |. ++++|+..|++ +. . ..++.
T Consensus 86 ~------~~~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~-~~~v~~~~~~~---~~------~--------~~e~~ 138 (338)
T 3ijl_A 86 S------PKDTAAKAAVDIALHDLVGKLLGAPWYKIWG---LN-KEKTPSTTFTI---GI------D--------TPDVV 138 (338)
T ss_dssp C------SCCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-GGGCCBBCCBC---CC------C--------CHHHH
T ss_pred c------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCcceEEEEE---eC------C--------CHHHH
Confidence 1 1246899999999999999999999999999 98 56777533321 10 0 00122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcc
Q 012041 218 FAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGN 297 (472)
Q Consensus 218 ~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~ 297 (472)
.+++.+.. ++|+++| .|+|. +.+.+.++++|+++ ++.|++|+
T Consensus 139 ~~~a~~~~-~g~~~~K----~Kvg~---------------~~d~~~v~avR~~~-------~~~l~vDa----------- 180 (338)
T 3ijl_A 139 RAKTKECA-GLFNILK----VKLGR---------------DNDKEMIETIRSVT-------DLPIAVDA----------- 180 (338)
T ss_dssp HHHHHHHH-TTCSSEE----EECSS---------------SCHHHHHHHHHTTC-------CCCEEEEC-----------
T ss_pred HHHHHHHH-hcccEEE----EecCc---------------HHHHHHHHHHHhhc-------CCcEEEEC-----------
Confidence 33333322 2465543 56441 12455555554432 46899999
Q ss_pred eeecCCCCCCCCCCccC-HHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHc
Q 012041 298 YDLNFKKQPNDGAHVLS-AQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQK 376 (472)
Q Consensus 298 y~~~~~~~~~~~n~~~s-~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~ 376 (472)
|++|| .++|+++ .+.+++|++.|||||++++|+++|++|++++++||++||+ +.+++++++++
T Consensus 181 ------------N~~~t~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~-~~~~~~~~~~~-- 244 (338)
T 3ijl_A 181 ------------NQGWKDRQYALDM-IHWLKEKGIVMIEQPMPKEQLDDIAWVTQQSPLPVFADES-LQRLGDVAALK-- 244 (338)
T ss_dssp ------------TTCCCCHHHHHHH-HHHHHHTTEEEEECCSCTTCHHHHHHHHHTCSSCEEESTT-CCSGGGTGGGB--
T ss_pred ------------cCCCCCHHHHHHH-HHHHhhCCCCEEECCCCCCcHHHHHHHHhcCCCCEEECCC-CCCHHHHHHHH--
Confidence 46784 8999988 4568999999999999999999999999999999999997 56679998885
Q ss_pred CCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 377 KSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 377 ~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
+++|++|||++++||||++++++++|+++|+++++++ +.|+.++.++.++++...++.
T Consensus 245 ~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~~la~~~~~~ 302 (338)
T 3ijl_A 245 GAFTGINIKLMKCTGMREAWKMVTLAHALGMRVMVGC-MTETSCAISAASQFSPAVDFA 302 (338)
T ss_dssp TTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHTTGGGCSEE
T ss_pred hhCCEEEecccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHHHHHHHHHHhccCCcc
Confidence 7999999999999999999999999999999997755 678988877777777655554
No 108
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.1e-42 Score=360.09 Aligned_cols=306 Identities=11% Similarity=0.138 Sum_probs=224.3
Q ss_pred ceEEEEEEEEEecCCC-------CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHH--HHHHHHHHh
Q 012041 44 AKVKSVKARQIIDSRG-------NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVL--NAVKNINDI 114 (472)
Q Consensus 44 m~I~~V~~~~v~~~~~-------~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~--~a~~~i~~~ 114 (472)
|||++|+++.+..... +++++|+|+|||+ +||||+.+++ |++++.. ++...|++.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~V~v~tdG~----------~G~GE~~~~~------~~~~~~~~~~~~~~i~~~ 66 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGSQDALLVRVAAGGH----------IGWGECEAAP------LPSIAAFVCPKSHGVCRP 66 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGGGEEEEEEEEETTE----------EEEEEECSCH------HHHHHHHHCCCSBTTBCC
T ss_pred CEEEEEEEEEEeccCCCccccccceEEEEEEEeCCc----------EEEEeeeccc------CCcccchhHHHHHHHHHH
Confidence 8999999998853211 4589999999988 8999985421 2233321 334456667
Q ss_pred hhhcccCCCCCCHH-HHHHHHHHhcCCCCCCccchh--HHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEE
Q 012041 115 LGPKLVGVDIRDQA-EVDAIMLEIDGTPNKSKIGAN--AILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFN 191 (472)
Q Consensus 115 lap~LiG~d~~d~e-~i~~~l~~~~~~~~~~~~g~~--A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 191 (472)
++|.|+|+ +.+++ .+++.+...... +..+..+ |++||||||||+.||.+|+|||+||| |..++++|+ |+
T Consensus 67 l~~~l~G~-~~~~~~~l~~~~~~~~~~--g~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~vp~--~~ 138 (401)
T 2hzg_A 67 VSDSVLGQ-RLDGPDDIARIAALVGYN--SMDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLG---YSASHGKRP--YA 138 (401)
T ss_dssp GGGGTTTC-BCSSHHHHHHHHHHHHHH--TTTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSCCCCBEE--EE
T ss_pred HHHHhCCC-CCCHHHHHHHHHHhhccC--CccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCCceEe--eE
Confidence 99999999 99886 333322211000 0012357 99999999999999999999999999 976667877 44
Q ss_pred eecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCC-CCcHHHHHHHHHH
Q 012041 192 VINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNV-QDNREGLVLLTDA 270 (472)
Q Consensus 192 ~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~-~~~~~~l~~v~~a 270 (472)
++.++ + +.+ +..+++.+...+||+.+| .|. ..+ |+ ++ +.+.+.++++|++
T Consensus 139 ~~~~~----~--~~~---------~~~~~a~~~~~~Gf~~iK----ik~----spv---G~---~~~~~~~e~v~avr~a 189 (401)
T 2hzg_A 139 SLLFG----D--TPQ---------ETLERARAARRDGFAAVK----FGW----GPI---GR---GTVAADADQIMAAREG 189 (401)
T ss_dssp EEECC----S--SHH---------HHHHHHHHHHHTTCSEEE----EES----TTT---TS---SCHHHHHHHHHHHHHH
T ss_pred EcCCC----C--CHH---------HHHHHHHHHHHhCCCeEE----EcC----CCC---CC---CHHHHHHHHHHHHHHH
Confidence 33322 0 121 234555555566676654 341 001 11 22 2234555555555
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCcc--CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVL--SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWAS 348 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~--s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~ 348 (472)
+ | .++.|++|+ |++| |.+++++++ +.+++|++.|||||++++|++++++
T Consensus 190 ~---G--~d~~l~vDa-----------------------n~~~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~ 240 (401)
T 2hzg_A 190 L---G--PDGDLMVDV-----------------------GQIFGEDVEAAAARL-PTLDAAGVLWLEEPFDAGALAAHAA 240 (401)
T ss_dssp H---C--SSSEEEEEC-----------------------TTTTTTCHHHHHTTH-HHHHHTTCSEEECCSCTTCHHHHHH
T ss_pred h---C--CCCeEEEEC-----------------------CCCCCCCHHHHHHHH-HHHHhcCCCEEECCCCccCHHHHHH
Confidence 5 3 279999999 3567 889999885 5589999999999999999999999
Q ss_pred HHh-hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 012041 349 LQS-SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLS 427 (472)
Q Consensus 349 L~~-~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lA 427 (472)
|++ ++++||++||+ ++++++++++++.+++|+++||++++||+|++++++++|+++|+++| +| +.|++++.++.++
T Consensus 241 l~~~~~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~-~h-~~es~i~~~a~~h 317 (401)
T 2hzg_A 241 LAGRGARVRIAGGEA-AHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYV-NH-TFTSHLALSASLQ 317 (401)
T ss_dssp HHTTCCSSEEEECTT-CSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-EC-CCSCHHHHHHHHG
T ss_pred HHhhCCCCCEEecCC-cCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEe-cC-CCCcHHHHHHHHH
Confidence 999 89999999997 56799999999999999999999999999999999999999999976 67 7899988776666
Q ss_pred HhhcCCC
Q 012041 428 VGLASGQ 434 (472)
Q Consensus 428 va~~~~~ 434 (472)
++...+.
T Consensus 318 laaa~~~ 324 (401)
T 2hzg_A 318 PFAGLEA 324 (401)
T ss_dssp GGTTCTT
T ss_pred HHHhCCC
Confidence 6654444
No 109
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=100.00 E-value=2.9e-42 Score=355.81 Aligned_cols=303 Identities=16% Similarity=0.178 Sum_probs=221.8
Q ss_pred ceEEEEEEEEEec------CC----CCCeEEEEEEEC----CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHH
Q 012041 44 AKVKSVKARQIID------SR----GNPTVEVDLITD----DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVK 109 (472)
Q Consensus 44 m~I~~V~~~~v~~------~~----~~~~v~V~I~td----G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~ 109 (472)
|||++|+...+-. +. .+++++|+|+|| |+ +||||+.+ .+.++++ ..
T Consensus 6 mkI~~i~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~~~~G~----------~G~GE~~~-------~~~~~~~---~~ 65 (392)
T 1tzz_A 6 VRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGK----------RVVGYGFN-------SNGRYGQ---GG 65 (392)
T ss_dssp CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSS----------EEEEEEEC-------CTTSCCC---HH
T ss_pred cEEeEEEEEEecCCCcccccccccCcceEEEEEEEECCCCCCC----------EEEEEecC-------CCchHHH---HH
Confidence 8999999555421 11 245799999886 77 89999853 1233333 34
Q ss_pred HHHHhhhhcccCCCC----------CCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcC
Q 012041 110 NINDILGPKLVGVDI----------RDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSG 179 (472)
Q Consensus 110 ~i~~~lap~LiG~d~----------~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G 179 (472)
.+++.++|.|+|+|+ .+++.+|+.|.+.....++ .+..+|++|||+||||+.||.+|+|||+|||..++
T Consensus 66 ~i~~~l~~~l~G~d~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG~~~~ 144 (392)
T 1tzz_A 66 LIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGH-GERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERHG 144 (392)
T ss_dssp HHHHTHHHHHHTSCGGGSBCTTSSSBCHHHHHHHHTTTCCSCCC-SHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCchhhhcccccccCHHHHHHHHHHhccccCc-cHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCccC
Confidence 466789999999999 9999999999764332222 24568999999999999999999999999996554
Q ss_pred C-CcceeeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCC
Q 012041 180 T-KELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQ 258 (472)
Q Consensus 180 ~-~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~ 258 (472)
. .++++|+ |++ +++.+.+ .+. ++..+++.+...+||+.+| .|.|. .+++
T Consensus 145 g~~~~~v~~--y~~-~~~~~~~--~~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~ 194 (392)
T 1tzz_A 145 VKANPRVFV--YAA-GGYYYPG--KGL---------SMLRGEMRGYLDRGYNVVK----MKIGG------------APIE 194 (392)
T ss_dssp SCCCCEEEE--EEE-CCCC------CH---------HHHHHHHHHHHTTTCSEEE----EECSS------------SCHH
T ss_pred CCcCCCeeE--EEe-CCcccCC--CCH---------HHHHHHHHHHHHcCCCEEE----EcCCC------------CCHH
Confidence 3 4455555 765 2222111 011 1234445555555665554 44431 1122
Q ss_pred CcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCC
Q 012041 259 DNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPF 338 (472)
Q Consensus 259 ~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~ 338 (472)
.+.+.++.+|+++ | +++.|++|+ |++||.+++++++ +.+++|++.|||||+
T Consensus 195 ~~~e~v~avr~a~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~ 245 (392)
T 1tzz_A 195 EDRMRIEAVLEEI---G--KDAQLAVDA-----------------------NGRFNLETGIAYA-KMLRDYPLFWYEEVG 245 (392)
T ss_dssp HHHHHHHHHHHHH---T--TTCEEEEEC-----------------------TTCCCHHHHHHHH-HHHTTSCCSEEECCS
T ss_pred HHHHHHHHHHHhc---C--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHHHcCCCeecCCC
Confidence 2345555555554 3 279999999 3567889999884 558999999999999
Q ss_pred CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcC----CCCEEEeccCCcccHHHHHHHHHHHHHcCCc---EEe
Q 012041 339 DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKK----SCNGLLLKVNQIGTVTESIQAALDSKSAGWG---VMV 411 (472)
Q Consensus 339 ~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~----a~d~i~ik~~k~GGitea~~ia~~A~a~g~~---~~v 411 (472)
+++|++++++|++++++||++||+ ++++++++++++.+ ++|++++|++++||||++++++++|+++|++ +|+
T Consensus 246 ~~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 324 (392)
T 1tzz_A 246 DPLDYALQAALAEFYPGPMATGEN-LFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIP 324 (392)
T ss_dssp CTTCHHHHHHHTTTCCSCEEECTT-CCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCC
T ss_pred ChhhHHHHHHHHhhCCCCEEECCC-CCCHHHHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHHHHHHCCCCCceEee
Confidence 999999999999999999999997 68899999999999 9999999999999999999999999999999 875
Q ss_pred cCCCCCChhhHHHHHHHhhcC
Q 012041 412 SHRSGETEDNFIADLSVGLAS 432 (472)
Q Consensus 412 ~~~~~Et~~s~~a~lAva~~~ 432 (472)
++ .+. ..+|++.++..
T Consensus 325 ~~----~~~-~~~hl~aa~~~ 340 (392)
T 1tzz_A 325 HG----GHQ-MSLNIAAGLGL 340 (392)
T ss_dssp SC----CBH-HHHHHHHHHTC
T ss_pred cH----HHH-HHHHHHHhCCC
Confidence 52 111 24777777654
No 110
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=1.1e-41 Score=350.75 Aligned_cols=294 Identities=14% Similarity=0.152 Sum_probs=210.1
Q ss_pred ceEEEEEEEEEe--------cC--CC-----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQII--------DS--RG-----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~--~~-----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+.+.+- ++ .| +..++|+|+|||+ +||||+.. + .
T Consensus 12 mkI~~i~~~~v~~pl~~~f~~s~~~g~~~~~~~~~~V~i~tdG~----------~G~GE~~~--------~-~------- 65 (392)
T 3v5c_A 12 WKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITIDGQ----------TGYGSSIH--------M-T------- 65 (392)
T ss_dssp CBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEETTE----------EEEEECCS--------C-C-------
T ss_pred cEEEEEEEEEEeeecCcccccccccCccCCCceeEEEEEEEcCC----------EEEEeecC--------c-H-------
Confidence 999999999883 22 33 2468999999998 89999753 1 0
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcce---e
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELV---M 185 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~---v 185 (472)
+.++|.|+|+||.++. . ..+.+..+|++|||+||||++||.+|+|||+||| |+.+++ +
T Consensus 66 ----~~l~~~liG~d~~~~~---------~---~~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~~~~v 126 (392)
T 3v5c_A 66 ----PEWAEDVIGRRLLDLF---------D---DRGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GAHLETGASL 126 (392)
T ss_dssp ----HHHHHTTTTCBGGGGB---------C---TTSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHS---CCCSCCCCCE
T ss_pred ----HHHHHHhCCCCHHHHH---------h---hccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCcccccc
Confidence 2478999999997631 1 1123456899999999999999999999999999 987766 2
Q ss_pred eeeEEEeecCCccCCCcccccceeecc-CCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCC---CCCCcH
Q 012041 186 PVPAFNVINGGSHAGNNLAMQEFMILP-VGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAP---NVQDNR 261 (472)
Q Consensus 186 p~~~~~~~~gg~~~~~~l~~~e~~~~p-~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~---~~~~~~ 261 (472)
++|+|++..+.. . +...+ -| ..++..+++.+...+||+++| .|+|. .+.|.+ +++.+.
T Consensus 127 ~v~~y~~~~~~~-~---~~~~~---~~~~~e~~~~~a~~~~~~Gf~~~K----lKvg~-------~~~~~~~~~~~~~d~ 188 (392)
T 3v5c_A 127 VVPCYDTSLYFD-D---LHLAD---ERAAVALMQEEAMQGYAKGQRHFK----IKVGR-------GGRHMPLWEGTKRDI 188 (392)
T ss_dssp EEEEEEEEECBT-T---TTCCC---HHHHHHHHHHHHHHHHHTTCCCEE----EECCT-------TTTTSCHHHHHHHHH
T ss_pred eEEEEEeecccc-c---ccccc---cccCHHHHHHHHHHHHHCCCCEEE----ECCCC-------CCccccccccHHHHH
Confidence 344565422110 0 00000 00 001224455555566776665 56552 111211 112233
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcC
Q 012041 262 EGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQD 341 (472)
Q Consensus 262 ~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~ 341 (472)
++++++|+++ | +++.|++|+ |+.||.++|+++ .+.+++|++.|||||++ +
T Consensus 189 ~~v~avR~a~---g--~~~~l~vDa-----------------------N~~w~~~~A~~~-~~~L~~~~l~~iEeP~~-~ 238 (392)
T 3v5c_A 189 AIVRGISEVA---G--PAGKIMIDA-----------------------NNAYNLNLTKEV-LAALSDVNLYWLEAAFH-E 238 (392)
T ss_dssp HHHHHHHHHH---C--TTCCEEEEC-----------------------TTCCCHHHHHHH-HHHTTTSCCCEEECSSS-C
T ss_pred HHHHHHHHHc---C--CCCcEEeeC-----------------------CCCcCHHHHHHH-HHhcccCCCeEEeCCCC-c
Confidence 4444444443 4 389999999 467889999988 55689999999999998 7
Q ss_pred CHHHHHHHHhh-----cCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 012041 342 DWSSWASLQSS-----VDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSG 416 (472)
Q Consensus 342 D~~~~~~L~~~-----~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~ 416 (472)
|+++|++|+++ +++||++||+. + .++++++++.+++|++|+|+++ ||||++++++++|+++|++++ .|.+
T Consensus 239 d~~~~~~l~~~~~~~~~~ipIa~gE~~-~-~~~~~~li~~~a~dii~~d~~~-GGitea~kia~~A~~~gv~~~-~h~~- 313 (392)
T 3v5c_A 239 DEALYEDLKEWLGQRGQNVLIADGEGL-A-SPHLIEWATRGRVDVLQYDIIW-PGFTHWMELGEKLDAHGLRSA-PHCY- 313 (392)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEECCSS-C-CTTHHHHHHTTSCCEECCBTTT-BCHHHHHHHHHHHHHTTCEEC-CBCC-
T ss_pred CHHHHHHHHHhhccCCCCCcEECCCcc-c-HHHHHHHHHcCCCcEEEeCCCC-CCHHHHHHHHHHHHHcCCeEE-ecCC-
Confidence 99999999986 67999999974 5 6899999999999999999999 999999999999999999986 5533
Q ss_pred CChhhHHHHHHHhhcCCCc
Q 012041 417 ETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 417 Et~~s~~a~lAva~~~~~i 435 (472)
++.++.+++++++...+.+
T Consensus 314 ~s~i~~aa~~hlaaa~p~~ 332 (392)
T 3v5c_A 314 GNAYGIYASGHLSAAVRNF 332 (392)
T ss_dssp SCTHHHHHHHHHGGGCTTB
T ss_pred CcHHHHHHHHHHHHhCCCC
Confidence 7777776666666544443
No 111
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=100.00 E-value=3.5e-41 Score=352.69 Aligned_cols=299 Identities=19% Similarity=0.209 Sum_probs=217.6
Q ss_pred ceEEEEEEEEEecC--------------CCCCeEEEEEEEC---CeeeeeccCCCccccceeeeeccCCCCccCcchHHH
Q 012041 44 AKVKSVKARQIIDS--------------RGNPTVEVDLITD---DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLN 106 (472)
Q Consensus 44 m~I~~V~~~~v~~~--------------~~~~~v~V~I~td---G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~ 106 (472)
|||++|+++.+.-. ....+++|+|+|| |+ +||||+.+. +.+.+.
T Consensus 2 mkI~~i~~~~~~~p~~~p~~~~~~~~~~~~~~~~~V~v~td~~~G~----------~G~Ge~~~~---------g~~~~~ 62 (441)
T 2hxt_A 2 RTIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDL----------AGYGLVFTI---------GRGNDV 62 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTC----------EEEEEEEEC---------STTHHH
T ss_pred CcEEEEEEEEEEecCCCCcCcccccccCCCcceEEEEEEECCCCCC----------EEEEeecCC---------CCCcHH
Confidence 79999999988421 0124699999997 67 899998542 112334
Q ss_pred HHHHHHHhhhhcccCCCCCCHHH----HHHHHHHhcCC-CCC--CccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcC
Q 012041 107 AVKNINDILGPKLVGVDIRDQAE----VDAIMLEIDGT-PNK--SKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSG 179 (472)
Q Consensus 107 a~~~i~~~lap~LiG~d~~d~e~----i~~~l~~~~~~-~~~--~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G 179 (472)
+...++ .++|.|+|+|+.+++. +|+.|...+.. +.+ .++..+|++|||+||||++||.+|+|||+||| |
T Consensus 63 v~~~i~-~l~~~liG~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG---G 138 (441)
T 2hxt_A 63 QTAAVA-ALAEHVVGLSVDKVIADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIA---E 138 (441)
T ss_dssp HHHHHH-TTHHHHTTCBHHHHHHCHHHHHHHHHTCHHHHHTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHH---T
T ss_pred HHHHHH-HHHHHHcCCChHHHHhhHHHHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc---C
Confidence 444554 7999999999998865 67666531110 011 11225799999999999999999999999999 8
Q ss_pred CCccee---------------------------------------eeeEEEeecCCccCCCcccccceeeccCCcccHHH
Q 012041 180 TKELVM---------------------------------------PVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAE 220 (472)
Q Consensus 180 ~~~~~v---------------------------------------p~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~ 220 (472)
..++++ ++|.|++..|+. + .+. .+..++
T Consensus 139 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~--~--~~~---------e~~~~~ 205 (441)
T 2hxt_A 139 LTPEQLVDTIDFRYLSDALTRDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWL--G--YSD---------EKLVRL 205 (441)
T ss_dssp SCHHHHHHHCCCTTCTTTCCHHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECT--T--SCH---------HHHHHH
T ss_pred CCcccccccccccccccccchhhhhhhhhcccccchhhhhhcccCCcceeEeccccc--C--CCH---------HHHHHH
Confidence 653221 556687643321 0 111 233456
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceee
Q 012041 221 ALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDL 300 (472)
Q Consensus 221 a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~ 300 (472)
+.+...+||+.+| .|.|. +++.+.+.+++||+++ | +++.|++|+
T Consensus 206 a~~~~~~Gf~~vK----ik~g~-------------~~~~d~e~v~avR~a~---G--~d~~l~vDa-------------- 249 (441)
T 2hxt_A 206 AKEAVADGFRTIK----LKVGA-------------NVQDDIRRCRLARAAI---G--PDIAMAVDA-------------- 249 (441)
T ss_dssp HHHHHHTTCSEEE----EECCS-------------CHHHHHHHHHHHHHHH---C--SSSEEEEEC--------------
T ss_pred HHHHHHcCCCEEE----EccCC-------------CHHHHHHHHHHHHHhc---C--CCCeEEEEC--------------
Confidence 6666666776665 45431 1223345555555555 3 279999999
Q ss_pred cCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCC
Q 012041 301 NFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSC 379 (472)
Q Consensus 301 ~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~ 379 (472)
|++|+.++++++ .+.++++++.|||||++++|++++++|++++ ++||++||+ ++++++++++++.+++
T Consensus 250 ---------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~ 318 (441)
T 2hxt_A 250 ---------NQRWDVGPAIDW-MRQLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEH-TQNRVVFKQLLQAGAV 318 (441)
T ss_dssp ---------TTCCCHHHHHHH-HHTTGGGCCSCEECCSCTTCHHHHHHHHHHHTTSCEEECTT-CCSHHHHHHHHHHTCC
T ss_pred ---------CCCCCHHHHHHH-HHHHHhcCCCeeeCCCCHHHHHHHHHHHhhCCCCCEEEeCC-cCCHHHHHHHHHcCCC
Confidence 356788999988 4568999999999999999999999999998 599999997 7889999999999999
Q ss_pred CEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH-HHHHH
Q 012041 380 NGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNF-IADLS 427 (472)
Q Consensus 380 d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~-~a~lA 427 (472)
|+++||++++||||++++++++|+++|+++ ++|.+ ..+.+. ..|++
T Consensus 319 d~v~ik~~~~GGite~~~ia~~A~~~g~~~-~~h~~-~~~~~~~~~~~a 365 (441)
T 2hxt_A 319 DLIQIDAARVGGVNENLAILLLAAKFGVRV-FPHAG-GVGLCELVQHLA 365 (441)
T ss_dssp SEECCCTTTSSHHHHHHHHHHHHHHTTCEE-CCCCC-STTHHHHHHHHH
T ss_pred CEEEeCcceeCCHHHHHHHHHHHHHcCCeE-EEecC-hHHHHHHHHHHH
Confidence 999999999999999999999999999997 47743 333332 33554
No 112
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=9.9e-42 Score=351.68 Aligned_cols=294 Identities=15% Similarity=0.167 Sum_probs=216.3
Q ss_pred ceEEEEEEEEEe--------cC--CC-----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHH
Q 012041 44 AKVKSVKARQII--------DS--RG-----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAV 108 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~--~~-----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~ 108 (472)
|||++|+++.+. .+ .+ +++++|+|+|||+ +||||+. |
T Consensus 12 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~V~v~tdG~----------~G~GE~~-----------g------- 63 (392)
T 3p3b_A 12 WKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITIDGQ----------TGYGSSI-----------H------- 63 (392)
T ss_dssp CBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEETTE----------EEEEECC-----------S-------
T ss_pred CeEEEEEEEEEeccCCCcccccccccccCCCCcEEEEEEEECCC----------EEEEecc-----------c-------
Confidence 999999998773 12 11 4679999999988 8999962 1
Q ss_pred HHHHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcC----CC-cc
Q 012041 109 KNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSG----TK-EL 183 (472)
Q Consensus 109 ~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G----~~-~~ 183 (472)
.|+ .++|.|+|+|+.+++.+| +++..+|++|||+||||+.||.+|+|||+||| | .. ++
T Consensus 64 -~i~-~l~p~l~G~d~~~~~~~~------------~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~~~~~ 126 (392)
T 3p3b_A 64 -MTP-EWAEDVIGRRLLDLFDDR------------GRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GAHLETGASL 126 (392)
T ss_dssp -CCH-HHHHTTTTCBGGGGBCTT------------SCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC-----------CE
T ss_pred -HHH-HHHHHhcCCCHHHHHHHH------------hHHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc---CccccccccC
Confidence 255 688999999999887765 12456899999999999999999999999999 8 64 56
Q ss_pred eeeeeEEEe--ecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcH
Q 012041 184 VMPVPAFNV--INGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNR 261 (472)
Q Consensus 184 ~vp~~~~~~--~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~ 261 (472)
++|+ |++ ..+..+..+.+++.+ +..+++.+...+||+.+| .|.|. .+++.++..+..
T Consensus 127 ~vp~--~~s~~~~~~~~~~~~~~~~e--------~~~~~a~~~~~~Gf~~vK----ik~g~-------~~~~~~~~~~~~ 185 (392)
T 3p3b_A 127 VVPC--YDTSLYFDDLHLADERAAVA--------LMQEEAMQGYAKGQRHFK----IKVGR-------GGRHMPLWEGTK 185 (392)
T ss_dssp EEEE--EEEEECBTTTTCCSHHHHHH--------HHHHHHHHHHHTTCCCEE----EECCH-------HHHTSCHHHHHH
T ss_pred Ccce--eEeecccCCCCcccccchHH--------HHHHHHHHHHHhCCCEEE----ECcCc-------CcccCCccccHH
Confidence 7777 442 111111000111111 223455555556676554 44431 112221111123
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcC
Q 012041 262 EGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQD 341 (472)
Q Consensus 262 ~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~ 341 (472)
..++.++++.+.+| +++.|++|+ |++||.+++++++ +.+++|++.|||||++ +
T Consensus 186 ~~~e~v~avR~~~g--~d~~l~vDa-----------------------n~~~~~~~ai~~~-~~l~~~~i~~iE~P~~-~ 238 (392)
T 3p3b_A 186 RDIAIVRGISEVAG--PAGKIMIDA-----------------------NNAYNLNLTKEVL-AALSDVNLYWLEEAFH-E 238 (392)
T ss_dssp HHHHHHHHHHHHHC--TTCCEEEEC-----------------------TTCCCHHHHHHHH-HHTTTSCEEEEECSSS-C
T ss_pred HHHHHHHHHHHHhC--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHHhcCCCEEecCCc-c
Confidence 34555554444454 279999999 3567889999885 5589999999999999 9
Q ss_pred CHHHHHHHHhh-----cCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 012041 342 DWSSWASLQSS-----VDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSG 416 (472)
Q Consensus 342 D~~~~~~L~~~-----~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~ 416 (472)
|++++++|+++ +++||++|| . +++++++++++.+++|+++||++++ |||++++++++|+++|+++|+ | +.
T Consensus 239 d~~~~~~l~~~l~~~g~~iPIa~dE-~-~~~~~~~~~i~~~~~d~v~ik~~~~-Git~~~~i~~~A~~~gi~~~~-h-~~ 313 (392)
T 3p3b_A 239 DEALYEDLKEWLGQRGQNVLIADGE-G-LASPHLIEWATRGRVDVLQYDIIWP-GFTHWMELGEKLDAHGLRSAP-H-CY 313 (392)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEECC-S-SCCTTHHHHHHTTSCCEECCBTTTB-CHHHHHHHHHHHHHTTCEECC-B-CC
T ss_pred cHHHHHHHHHhhccCCCCccEEecC-C-CCHHHHHHHHHcCCCCEEEeCcccc-CHHHHHHHHHHHHHcCCEEEe-c-CC
Confidence 99999999999 899999999 4 6789999999999999999999999 999999999999999999865 7 78
Q ss_pred CChhhHHHHHHHhhcCCCc
Q 012041 417 ETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 417 Et~~s~~a~lAva~~~~~i 435 (472)
|+.++.+++++++...+.+
T Consensus 314 es~i~~~a~l~laa~~~~~ 332 (392)
T 3p3b_A 314 GNAYGIYASGHLSAAVRNF 332 (392)
T ss_dssp SCTHHHHHHHHHGGGCTTB
T ss_pred CCHHHHHHHHHHHHhCCCC
Confidence 9999988888888766543
No 113
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=100.00 E-value=3e-40 Score=340.37 Aligned_cols=291 Identities=13% Similarity=0.116 Sum_probs=211.2
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. ++.+ +++++|+|+|| |+ +||||+.+.. .++|.. +++...
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td~G~----------~G~GE~~~~g---~~~~~~---~~~~~~ 66 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGE----------VGLGFIQTLF---NPLPDQ---QEIESV 66 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEEEESS---SCCCCH---HHHHHH
T ss_pred CEEEEEEEEEEEeccCCceecccceecccceEEEEEEECCCC----------EEEEEeccCC---CccccH---HHHHHH
Confidence 899999988873 2322 35699999999 99 8999986521 123333 355666
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCC--CCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeee
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGT--PNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVP 188 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~--~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~ 188 (472)
|++.++|.|+|+|+.++ +..++.. ...+.+..+|++||||||||+.||.+|+|||+||| |. ++++|+
T Consensus 67 i~~~l~p~l~G~d~~~~------~~~~~~~~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLG---g~-~~~vp~- 135 (389)
T 2oz8_A 67 FEHEVWPSLKGNRAIAL------VHRVNRPRGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLG---SR-RNRVKA- 135 (389)
T ss_dssp HHHHTHHHHTTSCHHHH------TTCCCCCC------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTT---CS-CSEEEE-
T ss_pred HHHHHHHHHcCCCHHHH------HHHHhccCCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CC-CCceEE-
Confidence 78889999999998665 2222111 10111246799999999999999999999999999 86 356655
Q ss_pred EEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHH
Q 012041 189 AFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLT 268 (472)
Q Consensus 189 ~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~ 268 (472)
|++. +.+. .+. .+..+++.+...+||+.+| .|.|. .++ ...++.++
T Consensus 136 -y~~~--~~~~---~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~---~~~~e~v~ 181 (389)
T 2oz8_A 136 -YASG--LDFH---LDD---------DAFVSLFSHAASIGYSAFK----IKVGH------------RDF---DRDLRRLE 181 (389)
T ss_dssp -EEEC--CBTT---CCH---------HHHHHHHHHHHHTTCCEEE----EECCC------------SSH---HHHHHHHH
T ss_pred -EEeC--CCcC---CCH---------HHHHHHHHHHHHhCCCEEE----EccCC------------CCH---HHHHHHHH
Confidence 6542 2210 111 2234555555566776654 45441 111 23344443
Q ss_pred HHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhh--CCeeEEeCCCCcCCHHHH
Q 012041 269 DAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRD--FPIVSIEDPFDQDDWSSW 346 (472)
Q Consensus 269 ~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~--~~l~~iEdP~~~~D~~~~ 346 (472)
...+..| +++.|++|+ |++||.+++++++ +.+++ +++.|||||++++|++++
T Consensus 182 avR~a~G--~~~~l~vDa-----------------------n~~~~~~~a~~~~-~~l~~~g~~i~~iEqP~~~~~~~~~ 235 (389)
T 2oz8_A 182 LLKTCVP--AGSKVMIDP-----------------------NEAWTSKEALTKL-VAIREAGHDLLWVEDPILRHDHDGL 235 (389)
T ss_dssp HHHTTSC--TTCEEEEEC-----------------------TTCBCHHHHHHHH-HHHHHTTCCCSEEESCBCTTCHHHH
T ss_pred HHHHhhC--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHHHhcCCCceEEeCCCCCcCHHHH
Confidence 3332333 279999999 3567889999885 55899 999999999999999999
Q ss_pred HHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHH
Q 012041 347 ASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIAD 425 (472)
Q Consensus 347 ~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~ 425 (472)
++|++++ ++||++||+ + ++++++++++.+++|+++|| ||||++++++++|+++|+++|++|.+.| +++|
T Consensus 236 ~~l~~~~~~iPIa~dE~-~-~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~gi~~~~~~~~~e----a~lh 305 (389)
T 2oz8_A 236 RTLRHAVTWTQINSGEY-L-DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIGNTFLE----AGVH 305 (389)
T ss_dssp HHHHHHCCSSEEEECTT-C-CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEECCCGGG----TTHH
T ss_pred HHHHhhCCCCCEEeCCC-C-CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcCCeEeecccHHH----HHHH
Confidence 9999999 899999997 5 89999999999999999999 9999999999999999999988743433 5577
Q ss_pred HHHhhc
Q 012041 426 LSVGLA 431 (472)
Q Consensus 426 lAva~~ 431 (472)
++.++.
T Consensus 306 laaa~~ 311 (389)
T 2oz8_A 306 MAVALP 311 (389)
T ss_dssp HHHHST
T ss_pred HHhcCC
Confidence 777654
No 114
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=100.00 E-value=1e-40 Score=338.22 Aligned_cols=276 Identities=12% Similarity=0.062 Sum_probs=213.5
Q ss_pred ceEEEEEEEEEe--------cCCC----CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHH
Q 012041 44 AKVKSVKARQII--------DSRG----NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKN 110 (472)
Q Consensus 44 m~I~~V~~~~v~--------~~~~----~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~ 110 (472)
|||++|+++.+. .+.+ +..++|+|+|| |+ +||||+.++.. |+|++++.+++...
T Consensus 2 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~~---~~~~~e~~~~~~~~ 68 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGN----------AYFGECNAFQT---DWYDHETIASVKHV 68 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCC----------EEEEECCCBSS---TTSCSCBHHHHHHH
T ss_pred cEEEEEEEEEEeecccCCeecccEEEEeeeEEEEEEEECCCC----------EEEEEecCCCC---CcCCCCCHHHHHHH
Confidence 999999988773 2222 34689999999 99 89999976532 46888888888888
Q ss_pred HHHhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEE
Q 012041 111 INDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAF 190 (472)
Q Consensus 111 i~~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~ 190 (472)
+++.+ |.|+|+||.+++.+|+.|.+.. + ..+|++|||+||||+.||..|+ ++|+ |
T Consensus 69 l~~~~-~~l~G~d~~~~~~l~~~l~~~~-----g--~~~a~said~ALwDl~gk~~g~---------------~v~~--~ 123 (342)
T 2okt_A 69 IEQWF-EDNRNKSFETYEAALKLVDSLE-----N--TPAARATIVMALYQMFHVLPSF---------------SVAY--G 123 (342)
T ss_dssp HHHHH-HHHTTCCBCSHHHHHHTTGGGT-----T--CHHHHHHHHHHHHHTTCCCCCE---------------EEEC--E
T ss_pred HHHHH-HHHcCCCcCCHHHHHHHHHHhh-----c--ChHHHHHHHHHHHHHhhhhhCc---------------eEee--e
Confidence 88767 9999999999999998886531 1 3579999999999999999886 3555 4
Q ss_pred EeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHH
Q 012041 191 NVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDA 270 (472)
Q Consensus 191 ~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~a 270 (472)
.+++|. +. ++..+...+||+++| .|+| .+ +.++++++|++
T Consensus 124 ~~~~g~-------~~-------------e~~~~~~~~G~~~~K----iKvg---------------~~-d~~~v~avr~~ 163 (342)
T 2okt_A 124 ATASGL-------SN-------------KQLESLKATKPTRIK----LKWT---------------PQ-IMHQIRVLREL 163 (342)
T ss_dssp EEESSC-------CH-------------HHHHHHHHHCCSEEE----EECC---------------TT-HHHHHHHHTTS
T ss_pred EEEecC-------CH-------------HHHHHHHHcCCcEEE----EEeC---------------HH-HHHHHHHHHHh
Confidence 443111 00 111233345676554 4532 13 35555555443
Q ss_pred HHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHH
Q 012041 271 IEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQ 350 (472)
Q Consensus 271 v~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~ 350 (472)
+ +++.|++|+ |++||.++| ++ .+.+++|++.|||||++++|+++|++
T Consensus 164 ~------~~~~l~vDa-----------------------N~~~~~~~A-~~-~~~l~~~~i~~iEqP~~~~d~~~~~~-- 210 (342)
T 2okt_A 164 D------FHFQLVIDA-----------------------NESLDRQDF-TQ-LQLLAREQVLYIEEPFKDISMLDEVA-- 210 (342)
T ss_dssp S------SCCEEEEEC-----------------------TTCCCGGGH-HH-HHHHGGGCEEEEECCCSSGGGGGGSC--
T ss_pred C------CCCeEEEEC-----------------------CCCCCHHHH-HH-HHHHhhCCCcEEECCCCCccHHHHHH--
Confidence 3 479999999 356788899 77 55689999999999999999999998
Q ss_pred hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhh
Q 012041 351 SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGL 430 (472)
Q Consensus 351 ~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~ 430 (472)
+++++||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.|+.++.++.++++.
T Consensus 211 ~~~~ipIa~dEs-~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~hlaa 288 (342)
T 2okt_A 211 DGTIPPIALDEK-ATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGG-MYEYGLSRYFTAMLAR 288 (342)
T ss_dssp TTSSCCEEESTT-CCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBC-SSCCHHHHHHHHHHHT
T ss_pred hcCCCCEEecCC-CCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcC-CcccHHHHHHHHHHHH
Confidence 677899999997 67899999999999999999999999999999999999999999998766 5688887766666665
Q ss_pred cC
Q 012041 431 AS 432 (472)
Q Consensus 431 ~~ 432 (472)
..
T Consensus 289 ~~ 290 (342)
T 2okt_A 289 KG 290 (342)
T ss_dssp TS
T ss_pred hc
Confidence 44
No 115
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.6e-39 Score=325.46 Aligned_cols=265 Identities=17% Similarity=0.203 Sum_probs=198.5
Q ss_pred CeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhccc-CCCCCCHHHHHHHHHHhcC
Q 012041 61 PTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV-GVDIRDQAEVDAIMLEIDG 139 (472)
Q Consensus 61 ~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~Li-G~d~~d~e~i~~~l~~~~~ 139 (472)
+.++|+|+.+|+ +||||+.+++ +| +++..++...++ .+.|.|+ |++ ++.+++.+ .
T Consensus 31 ~~~~V~v~d~G~----------~G~GE~~~~~-----~~-g~~~~~~~~~i~-~~~~~l~~~~~---~~~~~~~~----~ 86 (324)
T 1jpd_X 31 RVVVVELEEEGI----------KGTGECTPYP-----RY-GESDASVMAQIM-SVVPQLEKGLT---REELQKIL----P 86 (324)
T ss_dssp EEEEEEEEETTE----------EEEEEECCCG-----GG-TCCHHHHHHHHH-TTHHHHHTTCC---HHHHHHHS----C
T ss_pred eEEEEEEEeCCc----------eEEEEeeCCC-----Cc-CCCHHHHHHHHH-HHHHHHhcCCC---HHHHHHhC----c
Confidence 468999983399 8999986532 23 455555556565 5778874 554 55554432 1
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHH
Q 012041 140 TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFA 219 (472)
Q Consensus 140 ~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~ 219 (472)
..+|++|||+||||+.||..|+|||+||| |..+ +.|++.|++ +++ +. ++.++
T Consensus 87 -------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~-~~~~~~~~~-~~~-------~~---------e~~~~ 138 (324)
T 1jpd_X 87 -------AGAARNALDCALWDLAARRQQQSLADLIG---ITLP-ETVITAQTV-VIG-------TP---------DQMAN 138 (324)
T ss_dssp -------SSHHHHHHHHHHHHHHHHTTTCCHHHHHT---CCCC-SEEEBCEEE-CSC-------CH---------HHHHH
T ss_pred -------cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCC-CCcceeEEe-eCC-------CH---------HHHHH
Confidence 24799999999999999999999999999 8653 456666764 211 11 12345
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCccee
Q 012041 220 EALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYD 299 (472)
Q Consensus 220 ~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~ 299 (472)
++.+...+||+++| .|+|. +.+.+.++++|+++ +++.|++|+|
T Consensus 139 ~a~~~~~~G~~~~K----iKvg~---------------~~d~~~v~avr~~~------~~~~l~vDaN------------ 181 (324)
T 1jpd_X 139 SASTLWQAGAKLLK----VKLDN---------------HLISERMVAIRTAV------PDATLIVDAN------------ 181 (324)
T ss_dssp HHHHHHHTTCSEEE----EECCS---------------SCHHHHHHHHHHHC------TTSEEEEECT------------
T ss_pred HHHHHHHcCCCEEE----EEeCC---------------chHHHHHHHHHHhC------CCCEEEEECc------------
Confidence 66666667787665 55441 12355555555443 4899999993
Q ss_pred ecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCC
Q 012041 300 LNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSC 379 (472)
Q Consensus 300 ~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~ 379 (472)
+.|+.++++++ .+.+++|++.|||||++++|+++|++++ +++||++||+ ++++++++++++. +
T Consensus 182 -----------~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~--~~ipIa~dE~-~~~~~~~~~~~~~--~ 244 (324)
T 1jpd_X 182 -----------ESWRAEGLAAR-CQLLADLGVAMLEQPLPAQDDAALENFI--HPLPICADES-CHTRSNLKALKGR--Y 244 (324)
T ss_dssp -----------TCCCSTTHHHH-HHHHHHTTCCEEECCSCTTSCGGGGSSC--CSSCEEESTT-CSSGGGHHHHBTT--B
T ss_pred -----------CCCCHHHHHHH-HHHHHhCCCCEEECCCCCCCHHHHHhcc--CCCCEEEcCC-CCCHHHHHHHHhh--C
Confidence 45677788887 4568999999999999999999999885 6799999997 5788999999754 8
Q ss_pred CEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcC
Q 012041 380 NGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLAS 432 (472)
Q Consensus 380 d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~ 432 (472)
|++|||++++||+|++++++++|+++|+++|++| +.|+.++.++.++++...
T Consensus 245 ~~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~aa~~~la~~~ 296 (324)
T 1jpd_X 245 EMVNIKLDKTGGLTEALALATEARAQGFSLMLGC-MLCTSRAISAALPLVPQV 296 (324)
T ss_dssp SEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHGGGGGGC
T ss_pred CEEEEcchhhCcHHHHHHHHHHHHHcCCcEEEeC-cchHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999998776 578888877777776544
No 116
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-35 Score=299.28 Aligned_cols=268 Identities=16% Similarity=0.196 Sum_probs=192.4
Q ss_pred CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhcC
Q 012041 60 NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDG 139 (472)
Q Consensus 60 ~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~~ 139 (472)
+.+|+|+|+.+|+ +||||+.+++ .| +++.+++.+.++....+.+.|.+. +.+ ....+
T Consensus 30 ~~~v~V~i~d~G~----------~G~GE~~p~~-----~~-get~e~~~~~l~~~~~~~~~~~~~---~~~----~~~~~ 86 (329)
T 4gfi_A 30 ADVVTCTIRDGSF----------TGIGECVPYP-----RY-GESIEGVTADIEAMADRVAAGLTR---QEL----QQVMK 86 (329)
T ss_dssp EEEEEEEEEETTE----------EEEEEECCCG-----GG-TCCHHHHHHHHHTTHHHHHHTCCH---HHH----HHHSC
T ss_pred eEEEEEEEEECCE----------EEEEeccCCC-----CC-CcCHHHHHHHHHHHhhhhccccch---hhH----Hhhcc
Confidence 3568999963399 8999997653 24 677888888887766666666542 222 22111
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHH
Q 012041 140 TPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFA 219 (472)
Q Consensus 140 ~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~ 219 (472)
..+|++|||+||||+.||..|+|||++|| |..++++|+ |.+++.+ +. .+...
T Consensus 87 -------~~~a~aaid~AlwDl~gk~~g~pl~~llg---G~~~~~v~~--~~~~~~~-------~~---------~~~~~ 138 (329)
T 4gfi_A 87 -------PGAARNAVDCALWDLEAKMSGKRAAEQVL---GQPAQPLVT--AYTISLA-------DP---------DTMAA 138 (329)
T ss_dssp -------SSHHHHHHHHHHHHHHHHHHSCCHHHHHH---SSCCCCEEC--CEEECCC-------CH---------HHHHH
T ss_pred -------cHHHHHHHHHHHHHHHhhhcCCChhHHhC---CCCCCceee--eecccCC-------Ch---------HHHHH
Confidence 13799999999999999999999999999 988777776 3333211 00 01111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCccee
Q 012041 220 EALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYD 299 (472)
Q Consensus 220 ~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~ 299 (472)
++.+ ..+|+. +|+|.| ..++.+.+++++ ++| +++.|++|+
T Consensus 139 ~~~~--~~~~~~----~Kik~g---------------~~~d~~~v~~vr----~~g--~d~~l~vDa------------- 178 (329)
T 4gfi_A 139 KTAE--NAGRPL----LKIKTG---------------TADDEARLRAVR----AAA--PEARIIIDA------------- 178 (329)
T ss_dssp HHHH--TTTSSE----EEEECC---------------SSCCHHHHHHHH----HHC--TTSEEEEEC-------------
T ss_pred HHHh--hccccE----EEecCC---------------cccHHHHHHHHH----Hhc--cCCeEEEEc-------------
Confidence 1111 112221 223332 123466665544 343 489999999
Q ss_pred ecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCC
Q 012041 300 LNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSC 379 (472)
Q Consensus 300 ~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~ 379 (472)
|++||.++|+++ .+.++++++.|||||++++|..++. +.+.++||++||+ +.+++++.+. .+++
T Consensus 179 ----------N~~w~~~~A~~~-~~~l~~~~i~~iEqP~~~~~~~~~~--~~~~~ipia~dEs-~~~~~d~~~~--~~a~ 242 (329)
T 4gfi_A 179 ----------NEGWNDDNIEYY-LKLAAELKISLIEQPLPAGKDAMLA--RIEHPVLICADES-VHSTEDLAGL--RDRY 242 (329)
T ss_dssp ----------TTCCCTTTHHHH-HHHHHHTTCCEEECCSCTTSCGGGG--GSCCSSEEEESTT-CCTGGGSGGG--TTTC
T ss_pred ----------CCCCCHHHHHHH-HHhhhhcCceEEEecCCCccHHHHH--HhcCCCCchhccC-CCCHHHHHHH--hhcc
Confidence 456788899987 5568999999999999999987764 4556799999997 5677888764 5789
Q ss_pred CEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 380 NGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 380 d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
|++|||++++||||++++++++|+++|+++|++| +.|+.++.++.++++...+++
T Consensus 243 d~i~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~~aa~~~la~~~~~~ 297 (329)
T 4gfi_A 243 DAINIKLDKTGGLTEALVMKAEAERLGFTIMVGC-MLGTSLGMAPAVLVAQGTAFA 297 (329)
T ss_dssp SEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHHHTTTCSEE
T ss_pred CeEEecCceeCCHHHHHHHHHHHHHCCCEEEECC-cchhHHHHHHHHHHHhCCCee
Confidence 9999999999999999999999999999998776 578988888888877666654
No 117
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=100.00 E-value=1.6e-36 Score=304.97 Aligned_cols=266 Identities=14% Similarity=0.167 Sum_probs=194.1
Q ss_pred eEEEEEEEEEe--------cCCC----CCeEEEEEEECCeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHH
Q 012041 45 KVKSVKARQII--------DSRG----NPTVEVDLITDDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNIN 112 (472)
Q Consensus 45 ~I~~V~~~~v~--------~~~~----~~~v~V~I~tdG~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~ 112 (472)
+|++|+.+.+. .+.+ +..++|+|+|||+ +||||+.++ +.|.+++..++...++
T Consensus 2 ~I~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~tdG~----------~G~GE~~~~-----~~~~~e~~~~~~~~l~ 66 (322)
T 1r6w_A 2 HMRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGER----------EGWGEISPL-----PGFSQETWEEAQSVLL 66 (322)
T ss_dssp CCEEEEEEEEEEEBCTTCBC-CCBCCEEEEEEEEEEETTE----------EEEEEECCC-----TTTCSSCHHHHHHHHH
T ss_pred cceEEEEEEEEEeccCCeEeccEEEEeeeEEEEEEEECCe----------EEEEEecCC-----CCCCccCHHHHHHHHH
Confidence 67888887773 1222 3568999998898 899998653 2477778888888888
Q ss_pred HhhhhcccCCCCCCHHHHHHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEe
Q 012041 113 DILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNV 192 (472)
Q Consensus 113 ~~lap~LiG~d~~d~e~i~~~l~~~~~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~ 192 (472)
+.+.|.|+|+ .+ +.+ ..+|++|||+||||+.||..|+|+|+ .+|+ |
T Consensus 67 ~~~~~~l~g~--~~----------l~~-------~~~a~~aid~ALwDl~gk~~g~p~~~-----------~v~~--~-- 112 (322)
T 1r6w_A 67 AWVNNWLAGD--CE----------LPQ-------MPSVAFGVSCALAELTDTLPQAANYR-----------AAPL--C-- 112 (322)
T ss_dssp HHHHHHTTSC--CC----------CCS-------SHHHHHHHHHHHHHHTTCSCCCSCCC-----------CCCE--E--
T ss_pred HHHHHhhCCh--hh----------ccc-------ChHHHHHHHHHHHHhcCCCCCCCccc-----------eEEE--e--
Confidence 8899999998 22 111 24799999999999999999988751 3454 3
Q ss_pred ecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 012041 193 INGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIE 272 (472)
Q Consensus 193 ~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~ 272 (472)
.+ +. ++..+++.+. +||+++| .|+|. .+++.+.+.++++|+++
T Consensus 113 --~~-------~~---------~~~~~~a~~~--~G~~~~K----iKvG~------------~~~~~d~~~v~avr~~~- 155 (322)
T 1r6w_A 113 --NG-------DP---------DDLILKLADM--PGEKVAK----VRVGL------------YEAVRDGMVVNLLLEAI- 155 (322)
T ss_dssp --CS-------CH---------HHHHHHHHTC--CSSEEEE----EECSS------------SCHHHHHHHHHHHHHHC-
T ss_pred --CC-------CH---------HHHHHHHHHh--CCCceEE----EEeCC------------CCHHHHHHHHHHHHHhC-
Confidence 01 01 1122333221 4565554 55441 11222344444444432
Q ss_pred HhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhC---CeeEEeCCCCcCCHHHHHHH
Q 012041 273 KAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDF---PIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 273 ~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~---~l~~iEdP~~~~D~~~~~~L 349 (472)
+++.|++|+ |++||.++++++ .+.+++| ++.|||||++ ++++|++|
T Consensus 156 -----~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~~~i~~iEqP~~--~~~~~~~l 204 (322)
T 1r6w_A 156 -----PDLHLRLDA-----------------------NRAWTPLKGQQF-AKYVNPDYRDRIAFLEEPCK--TRDDSRAF 204 (322)
T ss_dssp -----TTEEEEEEC-----------------------TTCBCHHHHHHH-HHTSCTTTGGGEEEEECCBS--SHHHHHHH
T ss_pred -----CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHhhhhccCCeeEEECCCC--ChHHHHHH
Confidence 589999999 466789999988 5668998 9999999997 58999999
Q ss_pred HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH--HHHHH
Q 012041 350 QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNF--IADLS 427 (472)
Q Consensus 350 ~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~--~a~lA 427 (472)
++++++||++||+.. +. ++ ++++.+++|++|||++++||||++++++++|+++|+++|++|+ .|+.++. ++||+
T Consensus 205 ~~~~~ipIa~dE~~~-~~-~~-~~~~~~a~d~i~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es~ig~aa~~hla 280 (322)
T 1r6w_A 205 ARETGIAIAWDESLR-EP-DF-AFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSS-IESSLGLTQLARIA 280 (322)
T ss_dssp HHHHCCCEEESGGGG-ST-TC-CCCCCTTEEEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEBCS-SCCHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCC-Ch-hH-hhhhcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCcEEEECc-cccHHHHHHHHHHH
Confidence 999999999999854 43 46 6678999999999999999999999999999999999988775 5887654 55555
Q ss_pred Hhhc
Q 012041 428 VGLA 431 (472)
Q Consensus 428 va~~ 431 (472)
.++.
T Consensus 281 a~~~ 284 (322)
T 1r6w_A 281 AWLT 284 (322)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 5543
No 118
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=100.00 E-value=6.6e-36 Score=301.56 Aligned_cols=256 Identities=13% Similarity=0.109 Sum_probs=186.1
Q ss_pred CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhc
Q 012041 60 NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEID 138 (472)
Q Consensus 60 ~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~ 138 (472)
+..++|+|+|| |+ +||||+.+++ .|.++++.+++..+ +.+.|.| +|.+++.+|+.
T Consensus 28 ~~~~lV~v~td~G~----------~G~GE~~~~~-----~~~~e~~~~~~~~~-~~l~~~l---~~~~~~~~~~~----- 83 (332)
T 2ozt_A 28 RSGIYLRLEDEQGQ----------VGYGEIAPLP-----GWGSETLNADIALC-QQLPGHL---TPEIMATIPEA----- 83 (332)
T ss_dssp EEEEEEEEECTTSC----------EEEEEECCCT-----TSSSCCHHHHHHHH-HHSCSEE---CHHHHTTSCTT-----
T ss_pred eeEEEEEEEECCCC----------EEEEEecCCC-----CCCcccHHHHHHHH-HHhhccC---CHHHHHHHHHH-----
Confidence 45699999999 99 8999986542 46777777776655 3577766 44433333211
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccH
Q 012041 139 GTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSF 218 (472)
Q Consensus 139 ~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~ 218 (472)
+ ..+++|||+||| +.|| || |..+ + ++ |+... +.+.+..
T Consensus 84 -------~-~~a~~aid~Al~-l~gk---------lg---g~~~-~-~~--y~~~~-----------------~~~e~~~ 121 (332)
T 2ozt_A 84 -------L-PAAQFGFATAWQ-SVGR---------LP---YRVR-P-WP--ICALL-----------------GSGQAAL 121 (332)
T ss_dssp -------C-HHHHHHHHHHHH-HTTT---------CS---CCCC-C-CC--BCEEE-----------------CTGGGHH
T ss_pred -------h-HHHHHHHHHHHH-Hhcc---------cC---CCCC-C-cc--eEEec-----------------CChHHHH
Confidence 1 358899999999 8777 56 6544 3 33 43211 1112334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcce
Q 012041 219 AEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNY 298 (472)
Q Consensus 219 ~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y 298 (472)
+++.+...+||+++| .|+|. .+ ..++++.++...+..| +++.|++|+
T Consensus 122 ~~a~~~~~~G~~~~K----iKvg~------------~~---~~~d~~~v~avr~~~g--~~~~L~vDa------------ 168 (332)
T 2ozt_A 122 EQWQQSWQRGQTTFK----WKVGV------------MS---PEEEQAILKALLAALP--PGAKLRLDA------------ 168 (332)
T ss_dssp HHHHHHHHTTCCEEE----EECSS------------SC---HHHHHHHHHHHHHHSC--TTCEEEEEC------------
T ss_pred HHHHHHHHcCCcEEE----EEeCC------------CC---hHHHHHHHHHHHHHcC--CCCEEEEcc------------
Confidence 556666666776654 56541 11 2334444433333333 279999999
Q ss_pred eecCCCCCCCCCCccCHHHHHHHHHHHHhhC---CeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHH
Q 012041 299 DLNFKKQPNDGAHVLSAQSLGDLYKEFVRDF---PIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQ 375 (472)
Q Consensus 299 ~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~---~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~ 375 (472)
|+.||.+++++++ +.+++| ++.|||||++++|+++|++|++++++||++||+ ++++++++++++
T Consensus 169 -----------N~~~~~~~A~~~~-~~l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dEs-~~~~~~~~~~~~ 235 (332)
T 2ozt_A 169 -----------NGSWDRATANRWF-AWLDRHGNGKIEYVEQPLPPDQWQALLSLAQTVTTAIALDES-VVSAAEVQRWVD 235 (332)
T ss_dssp -----------TTCCCHHHHHHHH-HHHHHHCCTTEEEEECCSCTTCHHHHHHHHHHCSSCEEESTT-CCSHHHHHHHHH
T ss_pred -----------cCCCCHHHHHHHH-HHHHhhccCCcceeECCCCCCCHHHHHHHHHhCCCCEEeCCC-CCCHHHHHHHHH
Confidence 4668899999885 558999 999999999999999999999999999999997 678999999999
Q ss_pred cCCCCEEEeccCCcccHHHHHHHHHHHHHc--CCcEEecCCCCCChhhH--HHHHHHhhc
Q 012041 376 KKSCNGLLLKVNQIGTVTESIQAALDSKSA--GWGVMVSHRSGETEDNF--IADLSVGLA 431 (472)
Q Consensus 376 ~~a~d~i~ik~~k~GGitea~~ia~~A~a~--g~~~~v~~~~~Et~~s~--~a~lAva~~ 431 (472)
.+++|+++||++++||++ +++++|+++ |+++|++|+ .|+.++. ++||+.++.
T Consensus 236 ~~a~~~i~ik~~~~GGi~---~i~~~A~~~~~gi~~~~~~~-~es~i~~aa~~hlaa~~~ 291 (332)
T 2ozt_A 236 RGWPGFFVIKTALFGDPD---SLSLLLRRGLEPQRLVFSSA-LEGAIARTAIFHLLETWQ 291 (332)
T ss_dssp TTCCSEEEECHHHHSCHH---HHHHHHHTTCCGGGEEEBCC-SCCHHHHHHHHHHHHHHC
T ss_pred hCCCCEEEEChhhhCCHH---HHHHHHHHhCCCCcEEEeCC-cchHHHHHHHHHHHHhCC
Confidence 999999999999999997 778899999 999998875 5887765 566666654
No 119
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=100.00 E-value=5.3e-34 Score=287.51 Aligned_cols=236 Identities=14% Similarity=0.121 Sum_probs=173.4
Q ss_pred CCeEEEEEEEC-CeeeeeccCCCccccceeeeeccCCCCccCcchHHHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHhc
Q 012041 60 NPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEID 138 (472)
Q Consensus 60 ~~~v~V~I~td-G~~~~~~p~~~~~G~gEa~~~~d~~~~~~~g~~~~~a~~~i~~~lap~LiG~d~~d~e~i~~~l~~~~ 138 (472)
+..++|+|+|| |+ +||||+.+++ .|+++++.+ .|.+.+ |
T Consensus 26 ~~~~~V~v~td~G~----------~G~GE~~~~~-----~~~~e~~~~---~l~~~l------------------l---- 65 (330)
T 3caw_A 26 REGVLLKVEWNDGL----------YGFADLHPWP-----ELGDLSLEE---QLSDLR------------------M---- 65 (330)
T ss_dssp EEEEEEEEECTTSC----------EEEEEECCCG-----GGTCCCHHH---HHHHHH------------------H----
T ss_pred eeEEEEEEEECCCC----------EEEEeecCCC-----CcCcccHHH---HHHHHH------------------h----
Confidence 35699999999 99 8999986532 356666544 233322 1
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccH
Q 012041 139 GTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSF 218 (472)
Q Consensus 139 ~~~~~~~~g~~A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~ 218 (472)
+ ....+|++|||+||||+.||..|+|||+ | | +++|+ |.++++..+ . +. +.+
T Consensus 66 ~-----~~~~~a~said~AlwDl~gk~~g~Pl~~--G---g---~~v~~--~~~~~~~~~--~--~~----------~~~ 116 (330)
T 3caw_A 66 G-----RMTTQIEQSIWLARRDALLRKEKKHVFD--G---G---EKIKN--NYLLSHFQD--L--KP----------GFL 116 (330)
T ss_dssp T-----CCCHHHHHHHHHHHHHHHHHHTTCBTTT--T---S---CCCCB--CEEECTTSC--C--CT----------THH
T ss_pred c-----cchHHHHHHHHHHHHHHHHHHcCCcccc--C---C---CceEE--EEEecCCCC--C--CH----------HHH
Confidence 1 1235799999999999999999999999 9 8 46776 433320000 0 01 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcce
Q 012041 219 AEALRMGSEVYHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNY 298 (472)
Q Consensus 219 ~~a~~~~~~~~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y 298 (472)
. +...+||+++| .|+|. + ..++++.++.. |+ +++.|++|+
T Consensus 117 ~---~~~~~G~~~~K----iKvg~-------------~---~~~d~~~v~av-r~----~~~~l~vDa------------ 156 (330)
T 3caw_A 117 D---GLKNEGYNTVK----VKMGR-------------D---LQKEADMLTHI-AA----SGMRMRLDF------------ 156 (330)
T ss_dssp H---HHHHHTCCEEE----EECSS-------------C---HHHHHHHHHHH-HH----TTCEEEEEC------------
T ss_pred H---HHHHcCCcEEE----EecCC-------------C---HHHHHHHHHHH-hC----CCCeEEEEC------------
Confidence 1 44455776665 56541 1 23445544333 33 378999999
Q ss_pred eecCCCCCCCCCCccCHHHHHHHHHHHHhh---CCeeEEeCCCCcC-CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHH
Q 012041 299 DLNFKKQPNDGAHVLSAQSLGDLYKEFVRD---FPIVSIEDPFDQD-DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAI 374 (472)
Q Consensus 299 ~~~~~~~~~~~n~~~s~~eai~~~~~~l~~---~~l~~iEdP~~~~-D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i 374 (472)
|++||.++|+++ .+.+++ +++.|||||++++ |++++ |+ ++ +||++||+ +.+++++++
T Consensus 157 -----------N~~~~~~~A~~~-~~~l~~~~~~~l~~iEqP~~~~~d~~~~--l~-~~-iPIa~dEs---~~~~~~~~i 217 (330)
T 3caw_A 157 -----------NALGSWQTFEKF-MVNLPLTVRPLIEYVEDPFPFDFHAWGE--AR-KL-AKIALDNQ---YDKVPWGKI 217 (330)
T ss_dssp -----------TTCSCHHHHHHH-HHTSCTTTGGGEEEEECCSSCCHHHHHH--HT-TT-SCEEESTT---GGGCCTTTC
T ss_pred -----------CCCCCHHHHHHH-HHHhhhhccCCceEEECCCCCCccHHHH--HH-hc-CcEEeCCC---CHHHHHHHH
Confidence 466889999988 455888 9999999999999 99999 99 88 99999996 579999999
Q ss_pred HcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHH--HHHHH
Q 012041 375 QKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFI--ADLSV 428 (472)
Q Consensus 375 ~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~--a~lAv 428 (472)
+.+++|++|||++++ |+| +++++|+++|+++++++ +.|+.++.+ +|++.
T Consensus 218 ~~~a~d~v~~k~~~~-Gi~---~i~~~A~~~gi~~~~~~-~~es~ig~aa~~hlaa 268 (330)
T 3caw_A 218 ASAPFDVIVIKPAKT-DVD---KAVAQCQKWNLKLAVTS-YMDHPVGVVHAVGVAM 268 (330)
T ss_dssp SSCSCSEEEECTTTS-CHH---HHHHHHHHTTCEEEEBC-CSCCHHHHHHHHHHHH
T ss_pred HcCCCCEEEechhhc-cHH---HHHHHHHHcCCcEEEeC-ccCcHHHHHHHHHHHc
Confidence 999999999999999 999 99999999999987655 578887654 55555
No 120
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=99.94 E-value=8.1e-27 Score=234.41 Aligned_cols=197 Identities=18% Similarity=0.235 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHhhcCCchHHHhhhhcCCCcceeeeeEEEeecCCccCCCcccccceeeccCCcccHHHHHHHH-HHH
Q 012041 150 AILGVSLSVCRAGAGAKGVPLYKHIQELSGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMG-SEV 228 (472)
Q Consensus 150 A~sAvd~ALwD~~ak~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~l~~~e~~~~p~~~~~~~~a~~~~-~~~ 228 (472)
+++||||||| |+| | + .++++|+. .+++.+ ..+++.+.. .+|
T Consensus 51 ~~aaid~Al~-------~~P-----g---~-~r~~v~~~--~ti~~~--------------------~~e~~~~~~~~~G 92 (327)
T 2opj_A 51 WAACYEAAEL-------GWP-----A---P-VRDTVPVN--ATVPAV--------------------GPEEAARIVASSG 92 (327)
T ss_dssp HHHHHHHHHT-------CCC-----C---C-SCSEEEBC--EEECSC--------------------CHHHHHHHHHHHC
T ss_pred HHHHHHHHHh-------CCC-----c---C-CCCeeEEe--EEeCCC--------------------CHHHHHHHHHHCC
Confidence 6899999997 457 4 3 45678873 332211 112233333 467
Q ss_pred HHHHHHHHHhhcCCCcccCCCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCC
Q 012041 229 YHILKGIIKEKYGQDACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPND 308 (472)
Q Consensus 229 ~~~lk~~lk~k~G~~~~~~~~~G~~~~~~~~~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~ 308 (472)
|+++| .|+|.. | .+++.+.+.++++|+++ | +++.|++|+
T Consensus 93 ~~~~K----iKvg~~-------g---~~~~~d~~~v~avR~~~---G--~~~~L~vDa---------------------- 131 (327)
T 2opj_A 93 CTTAK----VKVAER-------G---QSEANDVARVEAVRDAL---G--PRGRVRIDV---------------------- 131 (327)
T ss_dssp CSEEE----EECCC----------------CHHHHHHHHHHHH---C--TTSEEEEEC----------------------
T ss_pred CCEEE----EEeCCC-------C---CCHHHHHHHHHHHHHHh---C--CCCEEEEEC----------------------
Confidence 76665 565421 1 12234566676666665 3 279999999
Q ss_pred CCCccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC
Q 012041 309 GAHVLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ 388 (472)
Q Consensus 309 ~n~~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k 388 (472)
|++||.++|+++ .+.+++|++.|||||++ ++++|++|++++++||++||+ +.+++++.++++.+++|++|||+++
T Consensus 132 -N~~w~~~~A~~~-~~~L~~~~l~~iEqP~~--~~~~~~~l~~~~~iPIa~dEs-~~~~~~~~~~i~~~a~d~i~ik~~~ 206 (327)
T 2opj_A 132 -NGAWDVDTAVRM-IRLLDRFELEYVEQPCA--TVDELAEVRRRVSVPIAADES-IRRAEDPLRVRDAEAADVVVLKVQP 206 (327)
T ss_dssp -TTCSCHHHHHHH-HHHHGGGCEEEEECCSS--SHHHHHHHHHHCSSCEEC------------CTTTTTCCSBEEECHHH
T ss_pred -CCCCCHHHHHHH-HHHHHhcCCcEEeCCCC--CHHHHHHHHhhCCCCEEcCCC-CCCHHHHHHHHHhCCCCEEEeCccc
Confidence 466889999988 45689999999999997 589999999999999999997 5678999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCC
Q 012041 389 IGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQ 434 (472)
Q Consensus 389 ~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~ 434 (472)
+||||+++++++ .+|+++|+++ +.|+.++.++.++++...+.
T Consensus 207 ~GGit~~~~ia~---~~gi~~~~~~-~~es~ig~aa~~hlaaa~~~ 248 (327)
T 2opj_A 207 LGGVRAALRLAE---ECGLPVVVSS-AVETSVGLAAGVALAAALPE 248 (327)
T ss_dssp HTSHHHHHHHHH---HTCSCEEEBC-CSCCHHHHHHHHHHHHHSSC
T ss_pred cCCHHHHHHHHH---HcCCcEEEcC-CCcCHHHHHHHHHHHHhCCC
Confidence 999999998864 4699998766 57888876555555543333
No 121
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.02 E-value=0.0042 Score=62.23 Aligned_cols=72 Identities=13% Similarity=0.094 Sum_probs=59.3
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEeCCC------------CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCC
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIEDPF------------DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKS 378 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iEdP~------------~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a 378 (472)
.+|+.++.+++ .+.+++.++.||+-.. +..+++..+++++.+++||++... +++++++.++++.+.
T Consensus 234 ~g~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Gg-i~t~e~a~~~l~~G~ 311 (349)
T 3hgj_A 234 GGWSLEDTLAF-ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGL-ITTPEQAETLLQAGS 311 (349)
T ss_dssp TSCCHHHHHHH-HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSS-CCCHHHHHHHHHTTS
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECC-CCCHHHHHHHHHCCC
Confidence 45788888876 6668899999988542 224678889999999999999986 578999999999999
Q ss_pred CCEEEe
Q 012041 379 CNGLLL 384 (472)
Q Consensus 379 ~d~i~i 384 (472)
+|.|.+
T Consensus 312 aD~V~i 317 (349)
T 3hgj_A 312 ADLVLL 317 (349)
T ss_dssp CSEEEE
T ss_pred ceEEEe
Confidence 999986
No 122
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.49 E-value=0.021 Score=56.83 Aligned_cols=72 Identities=10% Similarity=0.094 Sum_probs=59.1
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEe--------C--CCCc-CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCC
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIE--------D--PFDQ-DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSC 379 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iE--------d--P~~~-~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~ 379 (472)
.+|+.++++++ .+.++++++.||+ + |..+ .+++..+++++.+++||++... +++++++.++++.+.+
T Consensus 224 ~g~~~~~~~~~-a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Gg-i~s~~~a~~~l~~G~a 301 (338)
T 1z41_A 224 KGLDIADHIGF-AKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGM-ITDGSMAEEILQNGRA 301 (338)
T ss_dssp TSCCHHHHHHH-HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSS-CCSHHHHHHHHHTTSC
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECC-CCCHHHHHHHHHcCCc
Confidence 46788888876 6668899988887 2 3333 4678889999999999999886 6789999999999999
Q ss_pred CEEEe
Q 012041 380 NGLLL 384 (472)
Q Consensus 380 d~i~i 384 (472)
|.|.+
T Consensus 302 D~V~i 306 (338)
T 1z41_A 302 DLIFI 306 (338)
T ss_dssp SEEEE
T ss_pred eEEee
Confidence 99987
No 123
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.17 E-value=0.025 Score=56.39 Aligned_cols=70 Identities=10% Similarity=0.140 Sum_probs=56.7
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCC----------C-CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDP----------F-DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP----------~-~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
+++.++.+++ .+.++++ +.||+-. . +..+++..+++++.+++||++... +++++++.++++.+.+|
T Consensus 226 g~~~~~~~~~-a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Gg-i~t~e~Ae~~l~~G~aD 302 (343)
T 3kru_A 226 GINIDMMVEY-INMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGL-ITTQELAEEILSNERAD 302 (343)
T ss_dssp SCCHHHHHHH-HHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESS-CCCHHHHHHHHHTTSCS
T ss_pred CccHHHHHHH-HHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeee-eeHHHHHHHHHhchhhH
Confidence 5788888876 6678888 8888863 1 224677788999999999988875 57899999999999999
Q ss_pred EEEe
Q 012041 381 GLLL 384 (472)
Q Consensus 381 ~i~i 384 (472)
.|.+
T Consensus 303 ~V~i 306 (343)
T 3kru_A 303 LVAL 306 (343)
T ss_dssp EEEE
T ss_pred HHHH
Confidence 9886
No 124
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=96.05 E-value=0.028 Score=55.58 Aligned_cols=98 Identities=12% Similarity=0.160 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCc-CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccH
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQ-DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTV 392 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~-~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGi 392 (472)
+.+..++-+.+ +++.+-..+--.++. ++.+.+.++++++++|+++|-.+ ++.-+...++.+ +|.+.|.++.+|.-
T Consensus 44 D~~atv~Qi~~-l~~aG~diVRvavp~~~~a~al~~I~~~~~vPlvaDiHf--~~~lal~a~e~G-~dklRINPGNig~~ 119 (366)
T 3noy_A 44 DVEATLNQIKR-LYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVIADIHF--APSYAFLSMEKG-VHGIRINPGNIGKE 119 (366)
T ss_dssp CHHHHHHHHHH-HHHTTCCEEEEECCSHHHHHHHHHHHHHCSSCEEEECCS--CHHHHHHHHHTT-CSEEEECHHHHSCH
T ss_pred CHHHHHHHHHH-HHHcCCCEEEeCCCChHHHHHHHHHHhcCCCCEEEeCCC--CHHHHHHHHHhC-CCeEEECCcccCch
Confidence 55666666454 566665555556654 66789999999999999999743 667777777654 88899999999999
Q ss_pred HHHHHHHHHHHHcCCcEEecCCC
Q 012041 393 TESIQAALDSKSAGWGVMVSHRS 415 (472)
Q Consensus 393 tea~~ia~~A~a~g~~~~v~~~~ 415 (472)
....++++.|+++|+++-+|-++
T Consensus 120 ~~~~~vv~~ak~~~~piRIGvN~ 142 (366)
T 3noy_A 120 EIVREIVEEAKRRGVAVRIGVNS 142 (366)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred hHHHHHHHHHHHcCCCEEEecCC
Confidence 99999999999999999887543
No 125
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.90 E-value=0.031 Score=56.16 Aligned_cols=70 Identities=6% Similarity=-0.070 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCC------------CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPF------------DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~------------~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
++.++.+++ .+.+++.++.||+-.. +..+++..+++++.+++||++... +++++++.++++.+.+|
T Consensus 243 ~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Gg-I~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 243 QTLEESIEL-ARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWG-FGTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHHHHHH-HHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSS-TTSHHHHHHHHHTTSCS
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHCCCcc
Confidence 567888876 6668899988887331 124677788999999999999886 67899999999999999
Q ss_pred EEEe
Q 012041 381 GLLL 384 (472)
Q Consensus 381 ~i~i 384 (472)
.|.+
T Consensus 321 ~V~i 324 (363)
T 3l5l_A 321 LVSV 324 (363)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9886
No 126
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=95.87 E-value=0.036 Score=56.00 Aligned_cols=69 Identities=6% Similarity=-0.055 Sum_probs=55.8
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCCc-----CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFDQ-----DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~~-----~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
+++.++++++ .+.++++++.||+.+... ...+ .+++++.+++||++.+.+ +++++.++++.+.+|+|.+
T Consensus 262 ~~~~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~~G~i--t~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 262 SNPEALTKHL-CKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKISNLRY--DFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp SCHHHHHHHH-HHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEEESSC--CHHHHHHHHHTTSCSEEEE
T ss_pred CCCHHHHHHH-HHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEEECCC--CHHHHHHHHHcCCCeEEEe
Confidence 4577788766 667899999999987521 1125 889999999999998864 6999999999999999987
No 127
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=95.59 E-value=0.028 Score=56.77 Aligned_cols=69 Identities=4% Similarity=-0.085 Sum_probs=53.6
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCCC------c--CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPFD------Q--DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~~------~--~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
++.++++++ .+.++++++.||+-+.. + .+++..+++++.+++||++... + +++++.++++.+.+|+|.+
T Consensus 253 ~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~-i-~~~~a~~~l~~g~aD~V~~ 329 (376)
T 1icp_A 253 NPTALGLYM-VESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGG-Y-DREDGNRALIEDRADLVAY 329 (376)
T ss_dssp CHHHHHHHH-HHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCC-C-CHHHHHHHHHCCCCcEEee
Confidence 456677766 67789999999987532 1 2334467899999999988886 4 6899999999999999986
No 128
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.58 E-value=0.058 Score=58.54 Aligned_cols=72 Identities=10% Similarity=0.073 Sum_probs=57.1
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEe-------CCCC--------cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHH
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIE-------DPFD--------QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQ 375 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iE-------dP~~--------~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~ 375 (472)
.+++.++++++ .+.++++++.||+ .+++ ...++..+++++.+++||++... +++++++.++++
T Consensus 223 ~g~~~~~~~~~-a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Gg-i~~~~~a~~~l~ 300 (671)
T 1ps9_A 223 DGGTFAETVEL-AQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNR-INDPQVADDILS 300 (671)
T ss_dssp TCCCHHHHHHH-HHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSS-CCSHHHHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCC-CCCHHHHHHHHH
Confidence 35788888876 5668889988885 3332 13467778899999999999886 578999999999
Q ss_pred cCCCCEEEe
Q 012041 376 KKSCNGLLL 384 (472)
Q Consensus 376 ~~a~d~i~i 384 (472)
.+.+|.|.+
T Consensus 301 ~g~aD~V~~ 309 (671)
T 1ps9_A 301 RGDADMVSM 309 (671)
T ss_dssp TTSCSEEEE
T ss_pred cCCCCEEEe
Confidence 999999984
No 129
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=95.17 E-value=0.1 Score=52.43 Aligned_cols=69 Identities=9% Similarity=-0.008 Sum_probs=56.6
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCCC------cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPFD------QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~~------~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
++.++++++ .+.++++++.||+-+.. ..+++..+++++.+++||++.... +++++.++++.+.+|+|.+
T Consensus 248 ~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggi--t~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 248 NEEADALYL-IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAY--TAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp THHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC--CHHHHHHHHHTTSCSEEEE
T ss_pred CCHHHHHHH-HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCc--CHHHHHHHHHCCCccEEEE
Confidence 466777766 66789999999987642 346777889999999999988864 6999999999999999986
No 130
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=94.26 E-value=0.22 Score=50.21 Aligned_cols=70 Identities=4% Similarity=-0.116 Sum_probs=54.4
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC-------cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD-------QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~-------~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
+++.++++++ .+.++++++.||+-.-. ..+++..+++++.+++||++.... +++++.++++.+.+|.|.+
T Consensus 251 ~~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi--~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 251 DEPEAMAFYL-AGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNY--DAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp SCHHHHHHHH-HHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSC--CHHHHHHHHHTTSCSEEEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCC--CHHHHHHHHHCCCceEEee
Confidence 4567788766 66789999888875321 124566788999999999887764 4999999999999999986
No 131
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=94.17 E-value=0.32 Score=48.75 Aligned_cols=70 Identities=11% Similarity=0.011 Sum_probs=54.8
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC------cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD------QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~------~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
+++.++++++ .+.++++++.||+-.-. ...++..+++++.+++||++... + +++++.++++.+.+|.|.+
T Consensus 246 ~~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Gg-i-~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 246 ADPILTYTAA-AALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGR-Y-NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp SSHHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESS-C-CHHHHHHHHHTTSCSEEEC
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCC-C-CHHHHHHHHHCCCcceehh
Confidence 3567777766 66788999888875432 12456678899999999988876 4 6999999999999999986
No 132
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=93.74 E-value=0.33 Score=48.11 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=54.8
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCC----------C-CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDP----------F-DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP----------~-~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
+++.++.+++ .+.+++.++.||+=- . +..+++-.+++++.+++||++.-. +++++++.++++.+.+|
T Consensus 225 g~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~Gg-I~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 225 GLTAKDYVPY-AKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGL-ITSGWQAEEILQNGRAD 302 (340)
T ss_dssp SCCGGGHHHH-HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESS-CCCHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCC-CCCHHHHHHHHHCCCee
Confidence 4677787766 666888887777631 1 123677788999999999987764 57899999999999999
Q ss_pred EEEe
Q 012041 381 GLLL 384 (472)
Q Consensus 381 ~i~i 384 (472)
.|.+
T Consensus 303 ~V~i 306 (340)
T 3gr7_A 303 LVFL 306 (340)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9987
No 133
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=93.63 E-value=0.23 Score=49.66 Aligned_cols=68 Identities=7% Similarity=0.018 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
+.++.+++ ++.+++.++.||+-.-.....+..+++++.+++||++... + +++++.++++.+.+|.|.+
T Consensus 248 ~~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Gg-i-t~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 248 PAATFGHV-ARELGRRRIAFLFARESFGGDAIGQQLKAAFGGPFIVNEN-F-TLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHH-HHHHHHTTCSEEEEECCCSTTCCHHHHHHHHCSCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred cHHHHHHH-HHHHHHcCCCEEEECCCCCCHHHHHHHHHHcCCCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 34566655 6778999999998654322223467888888988877775 4 7999999999999999886
No 134
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=93.59 E-value=0.24 Score=49.66 Aligned_cols=67 Identities=9% Similarity=0.026 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 315 AQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 315 ~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
.++++++ ++.+++.++.||+-.-.....+..+++++.+++||++... + +++++.++++.+.+|.|.+
T Consensus 241 ~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Gg-i-t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 241 AETFTYV-ARELGKRGIAFICSREREADDSIGPLIKEAFGGPYIVNER-F-DKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEEECCCCTTCCHHHHHHHHCSCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHH-HHHHHHhCCCEEEECCCCCCHHHHHHHHHHCCCCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 4566655 6778999999987544321113467888888988877765 4 7999999999999999986
No 135
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=92.56 E-value=0.4 Score=48.66 Aligned_cols=70 Identities=6% Similarity=-0.053 Sum_probs=51.5
Q ss_pred ccCHHHHHHHHHHHHhhCC------eeEEeC--------CCCc--------CCHHHHHHHHhhcCCeEEeCCccccCHHH
Q 012041 312 VLSAQSLGDLYKEFVRDFP------IVSIED--------PFDQ--------DDWSSWASLQSSVDIQLVGDDLLVTNPKR 369 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~------l~~iEd--------P~~~--------~D~~~~~~L~~~~~~pI~~dE~~~~~~~~ 369 (472)
+++.++++++ ++.+++.+ +.||+- +..+ .+++..+++++.+++||++... + ++++
T Consensus 256 ~~~~~~~~~l-a~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~-i-~~~~ 332 (402)
T 2hsa_B 256 SNPLSLGLAV-VERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGG-Y-TREL 332 (402)
T ss_dssp SCHHHHHHHH-HHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESS-C-CHHH
T ss_pred CCCHHHHHHH-HHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCC-C-CHHH
Confidence 3466777766 56688887 777653 1111 2345567889999999988775 4 6899
Q ss_pred HHHHHHcCCCCEEEe
Q 012041 370 IAEAIQKKSCNGLLL 384 (472)
Q Consensus 370 ~~~~i~~~a~d~i~i 384 (472)
+.++++.+.+|+|.+
T Consensus 333 a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 333 GIEAVAQGDADLVSY 347 (402)
T ss_dssp HHHHHHTTSCSEEEE
T ss_pred HHHHHHCCCCceeee
Confidence 999999999999987
No 136
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=88.56 E-value=0.82 Score=42.24 Aligned_cols=109 Identities=9% Similarity=0.045 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcC-CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccH
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQD-DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTV 392 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~-D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGi 392 (472)
++++++++ .+.+-+-++.+||=++... -++..++|+++++-.++|--. +.+.++++.+++.++-=++.+..
T Consensus 23 ~~~~a~~~-a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGT-Vlt~~~a~~ai~AGA~fivsP~~------ 94 (217)
T 3lab_A 23 DLVHAIPM-AKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGT-VCTADDFQKAIDAGAQFIVSPGL------ 94 (217)
T ss_dssp CGGGHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEEC-CCSHHHHHHHHHHTCSEEEESSC------
T ss_pred CHHHHHHH-HHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeecc-ccCHHHHHHHHHcCCCEEEeCCC------
Confidence 56788877 5667778999999998754 457889999998744544443 55799999999998654554432
Q ss_pred HHHHHHHHHHHHcCC------cEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 393 TESIQAALDSKSAGW------GVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 393 tea~~ia~~A~a~g~------~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
..++++.|+++|+ +++-|.++ ... +.-|...++.++|+
T Consensus 95 --~~evi~~~~~~~v~~~~~~~~~PG~~T---ptE--~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 95 --TPELIEKAKQVKLDGQWQGVFLPGVAT---ASE--VMIAAQAGITQLKC 138 (217)
T ss_dssp --CHHHHHHHHHHHHHCSCCCEEEEEECS---HHH--HHHHHHTTCCEEEE
T ss_pred --cHHHHHHHHHcCCCccCCCeEeCCCCC---HHH--HHHHHHcCCCEEEE
Confidence 2367888889999 88766632 111 23345667777774
No 137
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=86.91 E-value=3 Score=45.50 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=36.3
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
++...+++++.+++||++-.. +++++++.++++.+.+|+|.+
T Consensus 279 ~~~~~~~i~~~~~~pvi~~G~-i~~~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 279 TIPWVKLVKQVSKKPVLGVGR-YTDPEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp THHHHHHHHTTCSSCEECCSC-CCCHHHHHHHHHTTSCSBEEE
T ss_pred cHHHHHHHHHHCCCEEEEeCC-CCCHHHHHHHHHCCCCCEEEe
Confidence 466678899999999998875 678999999999999999884
No 138
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.79 E-value=3.2 Score=39.86 Aligned_cols=124 Identities=13% Similarity=0.110 Sum_probs=82.7
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCC---------CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEE
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPF---------DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGL 382 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~---------~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i 382 (472)
.++.++.+++ .+.+++.++..||.-. -.++++..+.+++..++++++= ..+..+++++++.+ ++.|
T Consensus 22 ~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l---~~n~~~i~~a~~~G-~~~V 96 (295)
T 1ydn_A 22 FVPTADKIAL-INRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVL---VPNMKGYEAAAAAH-ADEI 96 (295)
T ss_dssp CCCHHHHHHH-HHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEE---CSSHHHHHHHHHTT-CSEE
T ss_pred CcCHHHHHHH-HHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHCC-CCEE
Confidence 3688888877 5568889999999833 1256677777766546777432 24679999998875 6788
Q ss_pred EeccC----------C---cccHHHHHHHHHHHHHcCCcEE--ecCCC-----CCChhhH---HHHHHHhhcCCCcccCC
Q 012041 383 LLKVN----------Q---IGTVTESIQAALDSKSAGWGVM--VSHRS-----GETEDNF---IADLSVGLASGQIKTGA 439 (472)
Q Consensus 383 ~ik~~----------k---~GGitea~~ia~~A~a~g~~~~--v~~~~-----~Et~~s~---~a~lAva~~~~~i~~g~ 439 (472)
.+... + -.-+..+++++++|+++|+.+. +++.. ..+.... .+..+..+++..+.+.+
T Consensus 97 ~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~D 176 (295)
T 1ydn_A 97 AVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGD 176 (295)
T ss_dssp EEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred EEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecC
Confidence 88742 1 2256666777999999999986 44421 1223333 45555577888887555
Q ss_pred C
Q 012041 440 P 440 (472)
Q Consensus 440 ~ 440 (472)
.
T Consensus 177 t 177 (295)
T 1ydn_A 177 T 177 (295)
T ss_dssp T
T ss_pred C
Confidence 4
No 139
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=85.71 E-value=3.6 Score=42.96 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=69.0
Q ss_pred HHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC-------------cccHHHHHHHHHHHHHcCCc
Q 012041 343 WSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ-------------IGTVTESIQAALDSKSAGWG 408 (472)
Q Consensus 343 ~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k-------------~GGitea~~ia~~A~a~g~~ 408 (472)
++..+++++..+ ++|+++.. + +.+.++.+++.+ +|++.+-++- ..-+|..+++++.|+.+|++
T Consensus 310 ~~~i~~ik~~~p~~~viaGNV-a-T~e~a~~Li~aG-AD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vp 386 (556)
T 4af0_A 310 IEFIKWIKQTYPKIDVIAGNV-V-TREQAAQLIAAG-ADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIP 386 (556)
T ss_dssp HHHHHHHHHHCTTSEEEEEEE-C-SHHHHHHHHHHT-CSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCC
T ss_pred HHHHHHHHhhCCcceEEeccc-c-CHHHHHHHHHcC-CCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCC
Confidence 466677777775 99999984 3 579999999987 7888765531 24589999999999999999
Q ss_pred EEecCCCCCChhhHHHHHHHhhcCCCcccCCCC
Q 012041 409 VMVSHRSGETEDNFIADLSVGLASGQIKTGAPC 441 (472)
Q Consensus 409 ~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~~ 441 (472)
++.-...-- +--.--|+|+++.++.+|++.
T Consensus 387 vIADGGI~~---sGDi~KAlaaGAd~VMlGsll 416 (556)
T 4af0_A 387 CIADGGIGN---IGHIAKALALGASAVMMGGLL 416 (556)
T ss_dssp EEEESCCCS---HHHHHHHHHTTCSEEEESTTT
T ss_pred EEecCCcCc---chHHHHHhhcCCCEEEEchhh
Confidence 865443222 223456777889999999874
No 140
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=83.87 E-value=4.2 Score=40.80 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHhh--CCeeEEeCCCCcCCHHHHHHHHhh-----cCCeEEeCCccccCHHHHHHHHH--cCCCCEEEec
Q 012041 315 AQSLGDLYKEFVRD--FPIVSIEDPFDQDDWSSWASLQSS-----VDIQLVGDDLLVTNPKRIAEAIQ--KKSCNGLLLK 385 (472)
Q Consensus 315 ~~eai~~~~~~l~~--~~l~~iEdP~~~~D~~~~~~L~~~-----~~~pI~~dE~~~~~~~~~~~~i~--~~a~d~i~ik 385 (472)
.+..++-+.+ |++ ..|.-+-=| ..++-+.+.+++++ +++|+++|=. .+..-+...++ ..++|-+.|.
T Consensus 37 v~aTv~QI~~-L~~aG~eiVRvaVp-~~~~A~al~~I~~~l~~~~~~vPLVADiH--F~~~~al~a~~~~a~~~dkiRIN 112 (406)
T 4g9p_A 37 VEATTAQVLE-LHRAGSEIVRLTVN-DEEAAKAVPEIKRRLLAEGVEVPLVGDFH--FNGHLLLRKYPKMAEALDKFRIN 112 (406)
T ss_dssp HHHHHHHHHH-HHHHTCSEEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECC--SSHHHHHHHCHHHHHHCSEEEEC
T ss_pred HHHHHHHHHH-HHHcCCCEEEEecC-CHHHHHhHHHHHHHHHhcCCCCceEeeec--ccHHHHHHHHHHHHhHHhhcccC
Confidence 3433444344 344 447777655 45677888888887 6799999964 35443332211 2368999999
Q ss_pred cCCccc----HHHHHHHHHHHHHcCCcEEecCCCCC
Q 012041 386 VNQIGT----VTESIQAALDSKSAGWGVMVSHRSGE 417 (472)
Q Consensus 386 ~~k~GG----itea~~ia~~A~a~g~~~~v~~~~~E 417 (472)
|+.+|. -....++++.|..+|+++-+|-+.|.
T Consensus 113 PGNig~~~k~~e~~~~vv~~ak~~~~pIRIGVN~GS 148 (406)
T 4g9p_A 113 PGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGS 148 (406)
T ss_dssp TTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred ccccCccccHHHHHHHHHHHHHHccCCceecccccc
Confidence 999994 35677899999999999888776553
No 141
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=82.91 E-value=5.9 Score=42.76 Aligned_cols=71 Identities=11% Similarity=0.057 Sum_probs=49.1
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEe-------C----C-CC--cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHc
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIE-------D----P-FD--QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQK 376 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iE-------d----P-~~--~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~ 376 (472)
.+|+.++.+++ .+.+++ .+.++. + | +. ..++...+++++.+++||++--. ++++++..++++.
T Consensus 239 ~g~~~~~~~~~-~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~-i~~~~~a~~~l~~ 315 (690)
T 3k30_A 239 GGITREDIEGV-LRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGR-FTSPDAMVRQIKA 315 (690)
T ss_dssp TSCCHHHHHHH-HHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSC-CCCHHHHHHHHHT
T ss_pred CCCCHHHHHHH-HHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCC-CCCHHHHHHHHHC
Confidence 35778888876 566777 333332 1 1 11 12345566778888899987765 5789999999999
Q ss_pred CCCCEEEe
Q 012041 377 KSCNGLLL 384 (472)
Q Consensus 377 ~a~d~i~i 384 (472)
+.+|.|.+
T Consensus 316 g~~d~v~~ 323 (690)
T 3k30_A 316 GILDLIGA 323 (690)
T ss_dssp TSCSEEEE
T ss_pred CCcceEEE
Confidence 99999983
No 142
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=81.84 E-value=3 Score=38.90 Aligned_cols=108 Identities=8% Similarity=0.087 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCc-CCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQ-DDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~-~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+++++++. .+.+-+-++.+||=++.. +-.+..++++++++ +-|-++- +.+.++++.+++.|+ |++.. ++
T Consensus 44 ~~~~a~~~-a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGT--Vlt~~~a~~Ai~AGA-~fIvs-----P~ 114 (232)
T 4e38_A 44 NAEDIIPL-GKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGT--ILNGEQALAAKEAGA-TFVVS-----PG 114 (232)
T ss_dssp SGGGHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEEC--CCSHHHHHHHHHHTC-SEEEC-----SS
T ss_pred CHHHHHHH-HHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECC--cCCHHHHHHHHHcCC-CEEEe-----CC
Confidence 45677776 455667899999988864 44677888998886 4444443 456899999999985 65542 22
Q ss_pred HHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 392 VTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
. ..++++.|+.+|++++.|.+ |... +.-|...++.++|+
T Consensus 115 ~--~~~vi~~~~~~gi~~ipGv~---TptE--i~~A~~~Gad~vK~ 153 (232)
T 4e38_A 115 F--NPNTVRACQEIGIDIVPGVN---NPST--VEAALEMGLTTLKF 153 (232)
T ss_dssp C--CHHHHHHHHHHTCEEECEEC---SHHH--HHHHHHTTCCEEEE
T ss_pred C--CHHHHHHHHHcCCCEEcCCC---CHHH--HHHHHHcCCCEEEE
Confidence 2 24678889999999887764 2222 33446667888874
No 143
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=81.24 E-value=7.5 Score=34.78 Aligned_cols=108 Identities=14% Similarity=-0.011 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCC-HHHHHHHHhhcC--CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDD-WSSWASLQSSVD--IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIG 390 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D-~~~~~~L~~~~~--~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~G 390 (472)
+.+++.++ .+.+.+.++.+||=.+...+ .+..+++++.++ .+|-.+. +.+++++..+++.+ +|++ +-+.-.
T Consensus 20 ~~~~~~~~-~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~--v~~~~~~~~a~~~G-ad~i-v~~~~~- 93 (205)
T 1wa3_A 20 SVEEAKEK-ALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGT--VTSVEQCRKAVESG-AEFI-VSPHLD- 93 (205)
T ss_dssp SHHHHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEES--CCSHHHHHHHHHHT-CSEE-ECSSCC-
T ss_pred CHHHHHHH-HHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecc--cCCHHHHHHHHHcC-CCEE-EcCCCC-
Confidence 56777766 56678888888874333323 345778888763 6665554 45788988888765 7988 544322
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 391 TVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 391 Gitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
.++++.|+.+|++++.+..+ . .-+..|+.+++..+++
T Consensus 94 -----~~~~~~~~~~g~~vi~g~~t---~--~e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 94 -----EEISQFCKEKGVFYMPGVMT---P--TELVKAMKLGHTILKL 130 (205)
T ss_dssp -----HHHHHHHHHHTCEEECEECS---H--HHHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHcCCcEECCcCC---H--HHHHHHHHcCCCEEEE
Confidence 35778888999998764421 1 1133455566666654
No 144
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=78.94 E-value=11 Score=35.51 Aligned_cols=96 Identities=11% Similarity=0.129 Sum_probs=74.4
Q ss_pred cCHHHHHHHHHHHHhhCCeeEE-eCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSI-EDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~i-EdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
.++.+..+.|.+. ...|.-+ |+++-...++.++.+++.+++||.--+ +.+.++.+.... .-.+|++.+......
T Consensus 61 ~~~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v~lPvLrKD-fi~~~~qi~ea~-~~GAD~ilLi~a~l~- 135 (251)
T 1i4n_A 61 ASLEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLTCRPILAKD-FYIDTVQVKLAS-SVGADAILIIARILT- 135 (251)
T ss_dssp CCHHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTCCSCEEEEC-CCCSTHHHHHHH-HTTCSEEEEEGGGSC-
T ss_pred CCHHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhCCCCEEEee-CCCCHHHHHHHH-HcCCCEEEEecccCC-
Confidence 4677776666653 5667766 666667788999999999999999888 466777887744 445899999888654
Q ss_pred HHHHHHHHHHHHHcCCcEEecC
Q 012041 392 VTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~ 413 (472)
-....+..+.|+..|+.+++-.
T Consensus 136 ~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 136 AEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEe
Confidence 3678889999999999998764
No 145
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=78.56 E-value=11 Score=38.19 Aligned_cols=69 Identities=13% Similarity=0.149 Sum_probs=48.3
Q ss_pred ccCHHHHHHHHHHHHhh-CCeeEEe------------CCCCc--CCHHHHHHHHhhc--CCeEEeCCccccCHHHHHHHH
Q 012041 312 VLSAQSLGDLYKEFVRD-FPIVSIE------------DPFDQ--DDWSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAI 374 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~-~~l~~iE------------dP~~~--~D~~~~~~L~~~~--~~pI~~dE~~~~~~~~~~~~i 374 (472)
+|+.++.+++ .+.+++ .++.+|+ .|... .++.-.+++++.+ .+||++--. +++++++.+++
T Consensus 260 G~~~ed~~~l-a~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~Gg-I~t~e~Ae~~L 337 (419)
T 3l5a_A 260 GYTIDEFNQL-IDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGG-INSPESALDAL 337 (419)
T ss_dssp EECHHHHHHH-HHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSS-CCSHHHHHHHG
T ss_pred CCCHHHHHHH-HHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECC-CCCHHHHHHHH
Confidence 5678888876 566777 7776664 11111 2345567888887 488877654 56899999999
Q ss_pred HcCCCCEEEe
Q 012041 375 QKKSCNGLLL 384 (472)
Q Consensus 375 ~~~a~d~i~i 384 (472)
+. +|.|.+
T Consensus 338 ~~--aDlVai 345 (419)
T 3l5a_A 338 QH--ADMVGM 345 (419)
T ss_dssp GG--CSEEEE
T ss_pred Hh--CCcHHH
Confidence 98 998876
No 146
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=78.49 E-value=9.3 Score=37.21 Aligned_cols=71 Identities=11% Similarity=0.054 Sum_probs=48.4
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeC-------------CC------------CcCCHHHHHHHHhhc--CCeEEeCCcccc
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIED-------------PF------------DQDDWSSWASLQSSV--DIQLVGDDLLVT 365 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEd-------------P~------------~~~D~~~~~~L~~~~--~~pI~~dE~~~~ 365 (472)
++.++..++ ++.+++.++.+|.= |. .+..++..+++++.+ ++||++.-- +.
T Consensus 222 ~~~~~~~~~-a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GG-I~ 299 (336)
T 1f76_A 222 LSEEELIQV-ADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGG-ID 299 (336)
T ss_dssp CCHHHHHHH-HHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESS-CC
T ss_pred CCHHHHHHH-HHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECC-CC
Confidence 455666655 56677777665540 00 011235567888888 689987764 67
Q ss_pred CHHHHHHHHHcCCCCEEEecc
Q 012041 366 NPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 366 ~~~~~~~~i~~~a~d~i~ik~ 386 (472)
+.+++.++++.+ +|.|++--
T Consensus 300 ~~~da~~~l~~G-Ad~V~igr 319 (336)
T 1f76_A 300 SVIAAREKIAAG-ASLVQIYS 319 (336)
T ss_dssp SHHHHHHHHHHT-CSEEEESH
T ss_pred CHHHHHHHHHCC-CCEEEeeH
Confidence 899999999998 89998743
No 147
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=77.13 E-value=15 Score=34.83 Aligned_cols=112 Identities=10% Similarity=0.116 Sum_probs=76.8
Q ss_pred ccCHHHHHHHHHHHHhhCC---eeEE-eCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 312 VLSAQSLGDLYKEFVRDFP---IVSI-EDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~---l~~i-EdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
..++.+..+ ..++.+ |.-+ |+++-...++.++.+++.+++||.-.+ +..+++++..+...| +|.|.+...
T Consensus 78 ~~dp~~~A~----~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kd-fi~d~~qi~ea~~~G-AD~VlLi~a 151 (272)
T 3tsm_A 78 DFDPPALAK----AYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKD-FLFDPYQVYEARSWG-ADCILIIMA 151 (272)
T ss_dssp SCCHHHHHH----HHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCEEEES-CCCSTHHHHHHHHTT-CSEEEEETT
T ss_pred CCCHHHHHH----HHHHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCEEECC-ccCCHHHHHHHHHcC-CCEEEEccc
Confidence 346665443 345555 3333 555656788999999999999998777 456778888877665 788888877
Q ss_pred CcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 388 QIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 388 k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
-.. -.+..++.+.|+..|+.+++-.... . =+.-|..+++..+
T Consensus 152 ~L~-~~~l~~l~~~a~~lGl~~lvevh~~---e--El~~A~~~ga~iI 193 (272)
T 3tsm_A 152 SVD-DDLAKELEDTAFALGMDALIEVHDE---A--EMERALKLSSRLL 193 (272)
T ss_dssp TSC-HHHHHHHHHHHHHTTCEEEEEECSH---H--HHHHHTTSCCSEE
T ss_pred ccC-HHHHHHHHHHHHHcCCeEEEEeCCH---H--HHHHHHhcCCCEE
Confidence 664 4678889999999999987644221 1 1344455566555
No 148
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=77.01 E-value=9.8 Score=36.62 Aligned_cols=42 Identities=10% Similarity=-0.028 Sum_probs=34.0
Q ss_pred HHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 343 WSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 343 ~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
++..+++++.+ ++||++.-- +++++++.+++..+ +|.+++--
T Consensus 232 ~~~i~~v~~~~~~ipvi~~GG-I~~~~da~~~l~~G-Ad~V~ig~ 274 (314)
T 2e6f_A 232 LANVNAFYRRCPDKLVFGCGG-VYSGEDAFLHILAG-ASMVQVGT 274 (314)
T ss_dssp HHHHHHHHHHCTTSEEEEESS-CCSHHHHHHHHHHT-CSSEEECH
T ss_pred HHHHHHHHHhcCCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEch
Confidence 67778888888 799977764 67899999999887 89888743
No 149
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=75.42 E-value=7.6 Score=37.96 Aligned_cols=129 Identities=11% Similarity=0.116 Sum_probs=82.4
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC---cCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHc---CCCCEEEe
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD---QDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQK---KSCNGLLL 384 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~---~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~---~a~d~i~i 384 (472)
.++.++-+++ .+.|.+.++..||=-++ +.|++..+++++... +.+++=- ..+..+++..++. -.++.|.+
T Consensus 24 ~~~~~~Kl~i-a~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~--r~~~~~i~~a~~al~~ag~~~v~i 100 (325)
T 3eeg_A 24 QLNTEEKIIV-AKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPTICALT--RAKEADINIAGEALRFAKRSRIHT 100 (325)
T ss_dssp -CCTTHHHHH-HHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCSSEEEEEC--CSCHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCCCEEEEee--cCCHHHHHHHHHhhcccCCCEEEE
Confidence 4677888877 56688899999997443 557777888887654 5554321 2356777766654 23455543
Q ss_pred -------------ccCCcccHHHHHHHHHHHHHcCCcEEecCCC-CCChhhH---HHHHHHhhcCCCcccCCCCCc
Q 012041 385 -------------KVNQIGTVTESIQAALDSKSAGWGVMVSHRS-GETEDNF---IADLSVGLASGQIKTGAPCRS 443 (472)
Q Consensus 385 -------------k~~k~GGitea~~ia~~A~a~g~~~~v~~~~-~Et~~s~---~a~lAva~~~~~i~~g~~~~~ 443 (472)
+.+.--.+..+.+++++|+++|+.+.+++.. +.+.... .+..+...++..+.+.+..+.
T Consensus 101 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~ 176 (325)
T 3eeg_A 101 GIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGY 176 (325)
T ss_dssp EEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC
T ss_pred EecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCC
Confidence 2333445666778999999999998877632 2223333 344555668888887776443
No 150
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=73.42 E-value=27 Score=31.09 Aligned_cols=118 Identities=10% Similarity=0.003 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCC---CcCCHHHHHHHHhh-cCCeEEeCCccccCHHH-HHHHHHcCCCCEEEeccCC
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPF---DQDDWSSWASLQSS-VDIQLVGDDLLVTNPKR-IAEAIQKKSCNGLLLKVNQ 388 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~---~~~D~~~~~~L~~~-~~~pI~~dE~~~~~~~~-~~~~i~~~a~d~i~ik~~k 388 (472)
+.+++++.+.. +.+ ++.+||.-+ -..-++..+++++. .++||..|=-+....+. ++.+.+.| +|.+.+-..
T Consensus 11 ~~~~~~~~~~~-~~~-~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~G-ad~v~v~~~- 86 (211)
T 3f4w_A 11 TLPEAMVFMDK-VVD-DVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAG-ADYVTVLGV- 86 (211)
T ss_dssp CHHHHHHHHHH-HGG-GCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTT-CSEEEEETT-
T ss_pred CHHHHHHHHHH-hhc-CccEEEeCcHHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcC-CCEEEEeCC-
Confidence 57788887555 443 688889754 23556788889888 46888666432223444 56666665 687777433
Q ss_pred cccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 389 IGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 389 ~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
.+.....++.+.++++|+.+++.-...++... .+..+...++.++..
T Consensus 87 -~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~-~~~~~~~~g~d~i~v 133 (211)
T 3f4w_A 87 -TDVLTIQSCIRAAKEAGKQVVVDMICVDDLPA-RVRLLEEAGADMLAV 133 (211)
T ss_dssp -SCHHHHHHHHHHHHHHTCEEEEECTTCSSHHH-HHHHHHHHTCCEEEE
T ss_pred -CChhHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHHcCCCEEEE
Confidence 23445578888999999998764212233222 244555566777764
No 151
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=72.43 E-value=21 Score=32.95 Aligned_cols=111 Identities=9% Similarity=-0.018 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEe-------C-Ccccc-CHHHHHHHHHcCCCCEEEe
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVG-------D-DLLVT-NPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~-------d-E~~~~-~~~~~~~~i~~~a~d~i~i 384 (472)
+...+.++ ++..++.+...|+= ...+..+++++.+++||+| | +.+++ +.+++..+++.| +|++.+
T Consensus 34 ~~~~~~~~-A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G-ad~V~l 107 (232)
T 3igs_A 34 KPEIVAAM-ALAAEQAGAVAVRI----EGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG-AAIIAV 107 (232)
T ss_dssp SHHHHHHH-HHHHHHTTCSEEEE----ESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEE
T ss_pred CcchHHHH-HHHHHHCCCeEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC-CCEEEE
Confidence 45556655 66678888777763 4678899999999999885 1 12222 345777777765 789988
Q ss_pred ccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 385 KVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 385 k~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
+...........++.+.+++.|+.+++..... --+.-+...++.++
T Consensus 108 ~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~-----eea~~a~~~Gad~I 153 (232)
T 3igs_A 108 DGTARQRPVAVEALLARIHHHHLLTMADCSSV-----DDGLACQRLGADII 153 (232)
T ss_dssp ECCSSCCSSCHHHHHHHHHHTTCEEEEECCSH-----HHHHHHHHTTCSEE
T ss_pred CccccCCHHHHHHHHHHHHHCCCEEEEeCCCH-----HHHHHHHhCCCCEE
Confidence 77643222355667777788898887655321 12344455666666
No 152
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=72.24 E-value=28 Score=33.52 Aligned_cols=127 Identities=9% Similarity=0.047 Sum_probs=76.1
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEeCCC--Cc------CCH-HHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCE
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIEDPF--DQ------DDW-SSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNG 381 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iEdP~--~~------~D~-~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~ 381 (472)
..++.++-+++ .+.|++.++.+||--. .+ .|. +-++.+++.-++.+.+ .+.+..+++..++.+ +|.
T Consensus 23 ~~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~---l~~~~~~i~~a~~~g-~~~ 97 (307)
T 1ydo_A 23 VWIATEDKITW-INQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAA---LVPNQRGLENALEGG-INE 97 (307)
T ss_dssp SCCCHHHHHHH-HHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEE---ECCSHHHHHHHHHHT-CSE
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEE---EeCCHHhHHHHHhCC-cCE
Confidence 34688898877 5668899999999742 11 233 3333333332455543 123578999988876 677
Q ss_pred EEeccCCc-------------ccHHHHHHHHHHHHHcCCcEE------ecCC-CCCChhhHHH---HHHHhhcCCCcccC
Q 012041 382 LLLKVNQI-------------GTVTESIQAALDSKSAGWGVM------VSHR-SGETEDNFIA---DLSVGLASGQIKTG 438 (472)
Q Consensus 382 i~ik~~k~-------------GGitea~~ia~~A~a~g~~~~------v~~~-~~Et~~s~~a---~lAva~~~~~i~~g 438 (472)
+.+-..-. .-+..+.+++++|+++|+.+. +++. .+.+...... ..+..+++..+.+.
T Consensus 98 v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (307)
T 1ydo_A 98 ACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG 177 (307)
T ss_dssp EEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred EEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 77654322 124556888999999999874 2221 0123334444 44466788888766
Q ss_pred CCCC
Q 012041 439 APCR 442 (472)
Q Consensus 439 ~~~~ 442 (472)
+..+
T Consensus 178 DT~G 181 (307)
T 1ydo_A 178 DTIG 181 (307)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 5533
No 153
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=71.24 E-value=7.9 Score=35.87 Aligned_cols=93 Identities=9% Similarity=0.028 Sum_probs=56.5
Q ss_pred CcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEE--eCC-----CCcCCHHHHHHHHh
Q 012041 279 KINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSI--EDP-----FDQDDWSSWASLQS 351 (472)
Q Consensus 279 ~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~i--EdP-----~~~~D~~~~~~L~~ 351 (472)
.|.+.+|+.- .+ |.|.+...+- ..+...++ +++ .+.+++.++.+| -+. -...+++..+++++
T Consensus 8 ~iv~~iD~~~----~~-g~~~v~~~~~--~~~~~~~~---~~~-a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~ 76 (247)
T 3tdn_A 8 AVVVAIDAKR----VD-GEFMVFTYSG--KKNTGILL---RDW-VVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRP 76 (247)
T ss_dssp TCEEEEEEEE----ET-TEEEEEETTT--TEEEEEEH---HHH-HHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGG
T ss_pred eEEEEEEEEe----cC-CcEEEEEcCC--eecCCCCH---HHH-HHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHH
Confidence 4888899831 12 5555431100 00011233 334 344566665444 221 22457889999999
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
.+++|++.+-- +.+++++.++++.+ +|.+.+
T Consensus 77 ~~~ipvi~~Gg-i~~~~~~~~~l~~G-ad~V~i 107 (247)
T 3tdn_A 77 LTTLPIIASGG-AGKMEHFLEAFLRG-ADKVSI 107 (247)
T ss_dssp GCCSCEEEESC-CCSHHHHHHHHHTT-CSEECC
T ss_pred hCCCCEEEeCC-CCCHHHHHHHHHcC-CCeeeh
Confidence 99999977764 67899999999887 887765
No 154
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=70.80 E-value=41 Score=32.85 Aligned_cols=129 Identities=11% Similarity=-0.006 Sum_probs=83.5
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEeC------CC--------CcCCHHHHHHHHhhcC-CeEEeC-CccccCHHHHHHHH
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIED------PF--------DQDDWSSWASLQSSVD-IQLVGD-DLLVTNPKRIAEAI 374 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iEd------P~--------~~~D~~~~~~L~~~~~-~pI~~d-E~~~~~~~~~~~~i 374 (472)
..++.++.+++ .+.|.+.++..||= |. ..++++.++++++..+ +++++= -....+.+++++..
T Consensus 25 ~~~~~e~k~~i-~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 25 HQYTLDDVRAI-ARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp TCCCHHHHHHH-HHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHH
Confidence 34688888877 45678899999998 32 2568888888888754 665421 11123467888888
Q ss_pred HcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC-CCCChhh---HHHHHHHhhcCCCcccCCCCC
Q 012041 375 QKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHR-SGETEDN---FIADLSVGLASGQIKTGAPCR 442 (472)
Q Consensus 375 ~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~-~~Et~~s---~~a~lAva~~~~~i~~g~~~~ 442 (472)
+.+ +|.+.+-.. +-=+-++.++++.|+++|+.+...-+ ...+... ..+..+...++..+.+.+..+
T Consensus 104 ~aG-vd~v~I~~~-~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G 173 (345)
T 1nvm_A 104 QAG-ARVVRVATH-CTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGG 173 (345)
T ss_dssp HHT-CCEEEEEEE-TTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTC
T ss_pred hCC-cCEEEEEEe-ccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcC
Confidence 774 677777542 21124778889999999998755431 2233333 355666667788787555533
No 155
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=70.63 E-value=22 Score=33.87 Aligned_cols=92 Identities=18% Similarity=0.111 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHH
Q 012041 316 QSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTE 394 (472)
Q Consensus 316 ~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGite 394 (472)
++-++.+.+.++++++.++=+|+++++.+-+.++ .+ ..|.+.+ +++..-++.+... ---|.+|-+..+++.+
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd~~kIgs~~--~~n~~ll~~~a~~--~kPV~lk~G~~~t~~e 160 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY---ADMLQIGARN--MQNFPLLREVGRS--GKPVLLKRGFGNTVEE 160 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH---CSEEEECGGG--TTCHHHHHHHHHH--TCCEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh---CCeEEECccc--ccCHHHHHHHHcc--CCeEEEcCCCCCCHHH
Confidence 4556677888899999999999999998888776 45 5666666 3564444444333 4578899999989999
Q ss_pred HHHHHHHHHHcCC-cEEecCC
Q 012041 395 SIQAALDSKSAGW-GVMVSHR 414 (472)
Q Consensus 395 a~~ia~~A~a~g~-~~~v~~~ 414 (472)
+..+++.+++.|- .+++-|+
T Consensus 161 i~~Ave~i~~~Gn~~i~L~~R 181 (276)
T 1vs1_A 161 LLAAAEYILLEGNWQVVLVER 181 (276)
T ss_dssp HHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEEeC
Confidence 9999999998885 6777663
No 156
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=70.39 E-value=42 Score=31.89 Aligned_cols=78 Identities=13% Similarity=0.058 Sum_probs=49.2
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHH-------HHHHHHHHHHHcCCcEEecCCCCCChhhHHH
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVT-------ESIQAALDSKSAGWGVMVSHRSGETEDNFIA 424 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGit-------ea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a 424 (472)
..|+.|+.|+. -+....+..+. .--+|+|.||-+-+-++. =...++.+|+..|+.++.-+ .|+... .
T Consensus 174 ~~G~~ialDDF-GtG~ssl~~L~-~l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG--VEt~~q--~ 247 (294)
T 2r6o_A 174 ARGVRLALDDF-GTGYSSLSYLS-QLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG--IETAQQ--Y 247 (294)
T ss_dssp HHTCEEEEEEE-TSSCBCHHHHH-HSCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC--CCSHHH--H
T ss_pred HCCCEEEEECC-CCCchhHHHHH-hCCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec--CCcHHH--H
Confidence 45899999984 44433343333 336999999965443332 24568889999999986544 566433 3
Q ss_pred HHHHhhcCCCc
Q 012041 425 DLSVGLASGQI 435 (472)
Q Consensus 425 ~lAva~~~~~i 435 (472)
++...+++.++
T Consensus 248 ~~l~~lG~d~~ 258 (294)
T 2r6o_A 248 AFLRDRGCEFG 258 (294)
T ss_dssp HHHHHTTCCEE
T ss_pred HHHHHcCCCEE
Confidence 45555666554
No 157
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=68.91 E-value=12 Score=38.39 Aligned_cols=113 Identities=15% Similarity=0.237 Sum_probs=80.1
Q ss_pred cCHHHHHHHHHHHHhhCCeeEE-eCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSI-EDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~i-EdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
.++.++.+.|.+. .-.|.-+ |+++=...++.++++++.+++||.--+ +.+.++.+.+.. .-.+|++.+......
T Consensus 68 ~~~~~iA~~y~~~--A~~IsvLTd~~~F~gs~~dL~~vr~~v~lPvLrKD-FI~d~~Qi~ea~-~~GAD~ILLi~a~l~- 142 (452)
T 1pii_A 68 FDPARIAAIYKHY--ASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKD-FIIDPYQIYLAR-YYQADACLLMLSVLD- 142 (452)
T ss_dssp CCHHHHHHHHTTT--CSEEEEECCSTTTCCCTTHHHHHHHHCCSCEEEES-CCCSHHHHHHHH-HTTCSEEEEETTTCC-
T ss_pred CCHHHHHHHHHhh--CcEEEEEecccccCCCHHHHHHHHHhcCCCeEEEe-ccCCHHHHHHHH-HcCCCEEEEEcccCC-
Confidence 4666665554432 2335544 666767788999999999999998888 577888888844 445899999998765
Q ss_pred HHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 392 VTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
-.+..+..+.|+..|+.+++-....| =+.-|+.+++..+
T Consensus 143 ~~~l~~l~~~a~~lgm~~LvEvh~~e-----E~~~A~~lga~iI 181 (452)
T 1pii_A 143 DDQYRQLAAVAHSLEMGVLTEVSNEE-----EQERAIALGAKVV 181 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHH-----HHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHH-----HHHHHHHCCCCEE
Confidence 46788999999999999988643211 1344455555544
No 158
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=68.37 E-value=11 Score=36.23 Aligned_cols=87 Identities=17% Similarity=0.118 Sum_probs=54.0
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+..++-++.+.+.++++++.++=+|+++++.+-+.++ .+ +.|.+.+ +++..-++.+- +.---|.+|-+...+
T Consensus 71 lg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~---vd~lkIgA~~--~~n~~LLr~~a--~~gkPVilK~G~~~t 143 (288)
T 3tml_A 71 LGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV---VDVLQTPAFL--CRQTDFIHACA--RSGKPVNIKKGQFLA 143 (288)
T ss_dssp -CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---CSEEEECGGG--TTCHHHHHHHH--TSSSCEEEECCTTCC
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---CCEEEECccc--ccCHHHHHHHH--ccCCcEEEeCCCCCC
Confidence 3456778888898889999999999999888777665 34 3444444 23433233322 223355666666556
Q ss_pred HHHHHHHHHHHHHcC
Q 012041 392 VTESIQAALDSKSAG 406 (472)
Q Consensus 392 itea~~ia~~A~a~g 406 (472)
+.|+..+++.+.+.|
T Consensus 144 ~~e~~~ave~i~~~G 158 (288)
T 3tml_A 144 PHDMKNVIDKARDAA 158 (288)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC
Confidence 666666666655544
No 159
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=68.11 E-value=29 Score=34.17 Aligned_cols=92 Identities=7% Similarity=0.077 Sum_probs=57.8
Q ss_pred HHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC-------------cccHHHHHHHHHHHHHcCCc
Q 012041 343 WSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ-------------IGTVTESIQAALDSKSAGWG 408 (472)
Q Consensus 343 ~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k-------------~GGitea~~ia~~A~a~g~~ 408 (472)
++..++|++.. ++||+... +.++++++.+++.+ +|+|.+-.+- ...++-..++.+.++..+++
T Consensus 149 ~~~i~~lr~~~~~~~vi~g~--v~t~e~A~~a~~aG-aD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ip 225 (351)
T 2c6q_A 149 VEFVKDVRKRFPQHTIMAGN--VVTGEMVEELILSG-ADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGH 225 (351)
T ss_dssp HHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhcCCCeEEEEe--CCCHHHHHHHHHhC-CCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCc
Confidence 45678888888 68887654 45789999998887 7988663210 11234446677777777899
Q ss_pred EEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 409 VMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 409 ~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
++.... .-+..... -|+++++..+.+|.+
T Consensus 226 vIa~GG-I~~g~di~--kAlalGA~~V~vG~~ 254 (351)
T 2c6q_A 226 IISDGG-CSCPGDVA--KAFGAGADFVMLGGM 254 (351)
T ss_dssp EEEESC-CCSHHHHH--HHHHTTCSEEEESTT
T ss_pred EEEeCC-CCCHHHHH--HHHHcCCCceeccHH
Confidence 876442 23333333 344455666655554
No 160
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=67.95 E-value=27 Score=33.30 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=74.8
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEeCCC-------Cc-CCHH-HHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCE
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIEDPF-------DQ-DDWS-SWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNG 381 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iEdP~-------~~-~D~~-~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~ 381 (472)
..++.++.+++ .+.+++.++.+||--. +. .|.+ -++.+++.-++++.+- +.+..+++.+++.+ +|.
T Consensus 22 ~~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l---~~~~~~i~~a~~ag-~~~ 96 (298)
T 2cw6_A 22 NIVSTPVKIKL-IDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVL---TPNLKGFEAAVAAG-AKE 96 (298)
T ss_dssp SCCCHHHHHHH-HHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEE---CCSHHHHHHHHHTT-CSE
T ss_pred CCCCHHHHHHH-HHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEE---cCCHHhHHHHHHCC-CCE
Confidence 34688999877 5568889999999732 10 2433 3333333223444331 23578999998875 677
Q ss_pred EEeccCCc-------------ccHHHHHHHHHHHHHcCCcEEe------cCC-CCCChhhH---HHHHHHhhcCCCcccC
Q 012041 382 LLLKVNQI-------------GTVTESIQAALDSKSAGWGVMV------SHR-SGETEDNF---IADLSVGLASGQIKTG 438 (472)
Q Consensus 382 i~ik~~k~-------------GGitea~~ia~~A~a~g~~~~v------~~~-~~Et~~s~---~a~lAva~~~~~i~~g 438 (472)
+.+-..-. .-+..+.+++++|+++|+.+.+ ++. .+.+.... .+..+..+++..+.+.
T Consensus 97 v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 176 (298)
T 2cw6_A 97 VVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG 176 (298)
T ss_dssp EEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 77644321 2345677889999999999742 211 01223333 4555567788887655
Q ss_pred CC
Q 012041 439 AP 440 (472)
Q Consensus 439 ~~ 440 (472)
+.
T Consensus 177 DT 178 (298)
T 2cw6_A 177 DT 178 (298)
T ss_dssp ET
T ss_pred CC
Confidence 44
No 161
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=67.91 E-value=21 Score=33.65 Aligned_cols=91 Identities=19% Similarity=0.187 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHH
Q 012041 316 QSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTE 394 (472)
Q Consensus 316 ~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGite 394 (472)
.+.++.+.+.++++++-++=+|+++++.+-..++ .+ ..|.+.+ .++..-++++.+ .---|.+|-+..|++.+
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd~~kIga~~--~~n~~ll~~~a~--~~kPV~lk~G~~~t~~e 145 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY---SDILQIGARN--SQNFELLKEVGK--VENPVLLKRGMGNTIQE 145 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH---CSEEEECGGG--TTCHHHHHHHTT--SSSCEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh---CCEEEECccc--ccCHHHHHHHHh--cCCcEEEecCCCCCHHH
Confidence 4555667888899999999999999998777776 45 5666666 356333444433 44578889999999999
Q ss_pred HHHHHHHHHHcCC-cEEecC
Q 012041 395 SIQAALDSKSAGW-GVMVSH 413 (472)
Q Consensus 395 a~~ia~~A~a~g~-~~~v~~ 413 (472)
+...+...+..|- .+++-|
T Consensus 146 ~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 146 LLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp HHHHHHHHHTTTCCCEEEEE
T ss_pred HHHHHHHHHHCCCCeEEEEE
Confidence 9999999999885 566655
No 162
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=67.23 E-value=27 Score=35.13 Aligned_cols=91 Identities=10% Similarity=0.235 Sum_probs=55.9
Q ss_pred HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEecc-------CC------cccHHHHHHHHHHHHHcCCcE
Q 012041 343 WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV-------NQ------IGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~-------~k------~GGitea~~ia~~A~a~g~~~ 409 (472)
.+..+++++..++||+... +.+++.++.+++.+ +|+|.+-. ++ ...++...++++.++..++++
T Consensus 173 ~e~I~~ik~~~~i~Vi~g~--V~t~e~A~~a~~aG-AD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPV 249 (400)
T 3ffs_A 173 IRTLKEIKSKMNIDVIVGN--VVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPI 249 (400)
T ss_dssp HHHHHHHHTTCCCEEEEEE--ECSHHHHHHHHHTT-CSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCE
T ss_pred HHHHHHHHhcCCCeEEEee--cCCHHHHHHHHHcC-CCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCE
Confidence 5677888888899998765 45788888888775 78888721 11 123455566666666678998
Q ss_pred EecCCCCCChhhHHHHHHHhhcCCCcccCC
Q 012041 410 MVSHRSGETEDNFIADLSVGLASGQIKTGA 439 (472)
Q Consensus 410 ~v~~~~~Et~~s~~a~lAva~~~~~i~~g~ 439 (472)
+..... -+... +.-++++++..+.+|.
T Consensus 250 IA~GGI-~~~~d--i~kalalGAd~V~vGt 276 (400)
T 3ffs_A 250 IADGGI-RYSGD--IGKALAVGASSVMIGS 276 (400)
T ss_dssp EEESCC-CSHHH--HHHHHTTTCSEEEECG
T ss_pred EecCCC-CCHHH--HHHHHHcCCCEEEECh
Confidence 654432 22222 2223445666665553
No 163
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=67.03 E-value=26 Score=33.52 Aligned_cols=124 Identities=10% Similarity=0.064 Sum_probs=76.0
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCC--Cc------CCHH-HHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEE
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPF--DQ------DDWS-SWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGL 382 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~--~~------~D~~-~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i 382 (472)
.++.++.+++ .+.+++.++.+||.-. .+ .|.+ -++.+++..++++++= +.+.+++++.++.+ ++.|
T Consensus 26 ~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l---~~~~~~i~~a~~aG-~~~v 100 (302)
T 2ftp_A 26 PIEVADKIRL-VDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAAL---APNLKGFEAALESG-VKEV 100 (302)
T ss_dssp CCCHHHHHHH-HHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEE---CCSHHHHHHHHHTT-CCEE
T ss_pred CCCHHHHHHH-HHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEE---eCCHHHHHHHHhCC-cCEE
Confidence 4688888877 5668899999999742 11 2432 2344444445776542 23679999999886 6777
Q ss_pred EeccCC-------------cccHHHHHHHHHHHHHcCCcEE--ecCCC-----CCChhhHHHHHH---HhhcCCCcccCC
Q 012041 383 LLKVNQ-------------IGTVTESIQAALDSKSAGWGVM--VSHRS-----GETEDNFIADLS---VGLASGQIKTGA 439 (472)
Q Consensus 383 ~ik~~k-------------~GGitea~~ia~~A~a~g~~~~--v~~~~-----~Et~~s~~a~lA---va~~~~~i~~g~ 439 (472)
.+-..- ---+..+.+++++|+++|+.+. +++.. +.+.......++ ...++..+.+.+
T Consensus 101 ~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~D 180 (302)
T 2ftp_A 101 AVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGD 180 (302)
T ss_dssp EEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 762211 1234556888999999999873 22211 123334444444 467787776554
Q ss_pred C
Q 012041 440 P 440 (472)
Q Consensus 440 ~ 440 (472)
.
T Consensus 181 T 181 (302)
T 2ftp_A 181 T 181 (302)
T ss_dssp S
T ss_pred C
Confidence 4
No 164
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=66.86 E-value=42 Score=32.69 Aligned_cols=124 Identities=10% Similarity=0.053 Sum_probs=81.3
Q ss_pred ccCHHHHHHHHHH-HHhhCCeeEEeC--CCC-cCCHHHHHHHHh------hcC-CeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 312 VLSAQSLGDLYKE-FVRDFPIVSIED--PFD-QDDWSSWASLQS------SVD-IQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 312 ~~s~~eai~~~~~-~l~~~~l~~iEd--P~~-~~D~~~~~~L~~------~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
.++.++.+++ .+ .|++.++.+||= |.. ++|++..+++++ ..+ +.+++--. +..+++.+++.+ +|
T Consensus 37 ~~~~~~k~~i-~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~---~~~~i~~a~~~g-~~ 111 (337)
T 3ble_A 37 SFSTSEKLNI-AKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVD---GNKTVDWIKDSG-AK 111 (337)
T ss_dssp CCCHHHHHHH-HHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESS---TTHHHHHHHHHT-CC
T ss_pred CcCHHHHHHH-HHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEcc---chhhHHHHHHCC-CC
Confidence 3688888887 45 688899999997 553 678888888887 443 55554322 234888888776 57
Q ss_pred EEEeccCCc-------------ccHHHHHHHHHHHHHcCCcEEecCCC---C-CChhhH---HHHHHHhhcCCCcccCCC
Q 012041 381 GLLLKVNQI-------------GTVTESIQAALDSKSAGWGVMVSHRS---G-ETEDNF---IADLSVGLASGQIKTGAP 440 (472)
Q Consensus 381 ~i~ik~~k~-------------GGitea~~ia~~A~a~g~~~~v~~~~---~-Et~~s~---~a~lAva~~~~~i~~g~~ 440 (472)
.+.+-..-. --+..+.++++.|+++|+.+.+.... . ...... .+..+..+++..+.+.+.
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT 191 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDT 191 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECT
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 777644211 12457778889999999998765532 0 112222 444455667877765554
No 165
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=66.03 E-value=31 Score=31.68 Aligned_cols=111 Identities=7% Similarity=0.034 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEe---CC-----cccc-CHHHHHHHHHcCCCCEEEe
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVG---DD-----LLVT-NPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~---dE-----~~~~-~~~~~~~~i~~~a~d~i~i 384 (472)
+...+.++ ++..++.+...|+= ...+..+++++.+++||++ .+ .+++ +.+++..+++.| +|++.+
T Consensus 34 ~~~~~~~~-A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aG-ad~I~l 107 (229)
T 3q58_A 34 KPEIVAAM-AQAAASAGAVAVRI----EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAG-ADIIAF 107 (229)
T ss_dssp SHHHHHHH-HHHHHHTTCSEEEE----ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEE
T ss_pred CcchHHHH-HHHHHHCCCcEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcC-CCEEEE
Confidence 45566655 66677788777762 4688899999999999874 21 2222 245777777665 789988
Q ss_pred ccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 385 KVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 385 k~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
+...........++.+.+++.|+.+++..... --+.-+...++.++
T Consensus 108 ~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~-----eea~~a~~~Gad~I 153 (229)
T 3q58_A 108 DASFRSRPVDIDSLLTRIRLHGLLAMADCSTV-----NEGISCHQKGIEFI 153 (229)
T ss_dssp ECCSSCCSSCHHHHHHHHHHTTCEEEEECSSH-----HHHHHHHHTTCSEE
T ss_pred CccccCChHHHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHhCCCCEE
Confidence 87643222345567777778898887655321 12344455667766
No 166
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=66.00 E-value=33 Score=33.78 Aligned_cols=90 Identities=18% Similarity=0.231 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHH
Q 012041 316 QSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTE 394 (472)
Q Consensus 316 ~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGite 394 (472)
++-++.+.+.++++++.++=+|+++++.+-+.++ .+ ..|.+.+ .++..-++.+. +.---+.+|-+..+++.+
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~---vd~lkIgAr~--~~n~~LL~~va--~~~kPVilk~G~~~tl~e 228 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY---ADIIQIGARN--AQNFRLLSKAG--SYNKPVLLKRGFMNTIEE 228 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH---CSEEEECGGG--TTCHHHHHHHH--TTCSCEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh---CCEEEECccc--ccCHHHHHHHH--ccCCcEEEcCCCCCCHHH
Confidence 4556677888999999999999999998888776 55 5666666 35633344443 344678899999999999
Q ss_pred HHHHHHHHHHcCC-cEEec
Q 012041 395 SIQAALDSKSAGW-GVMVS 412 (472)
Q Consensus 395 a~~ia~~A~a~g~-~~~v~ 412 (472)
+..+++.+.+.|- .+++-
T Consensus 229 i~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 229 FLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp HHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHCCCCeEEEE
Confidence 9999999988875 56553
No 167
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=65.24 E-value=20 Score=34.21 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=67.4
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+..++-++.+.+.++++++-++=+|+++++.+-+.++ .+ +.|.+-+. ++.. +.+.+. +.--.|.+|-+..|+
T Consensus 69 ~~l~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---~d~~kIga~~~--~n~~-ll~~~a-~~~kPV~lk~G~~~t 141 (280)
T 2qkf_A 69 VGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV---CDVIQLPAFLA--RQTD-LVVAMA-KTGNVVNIKKPQFLS 141 (280)
T ss_dssp SCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---CSEEEECGGGT--TBHH-HHHHHH-HTCCEEEEECCTTSC
T ss_pred cchHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh---CCEEEECcccc--cCHH-HHHHHH-cCCCcEEEECCCCCC
Confidence 3456667777888889999999999999998888776 34 56666652 3434 333332 345678888888888
Q ss_pred HHHHHHHHHHHHHcCC-cEEecC
Q 012041 392 VTESIQAALDSKSAGW-GVMVSH 413 (472)
Q Consensus 392 itea~~ia~~A~a~g~-~~~v~~ 413 (472)
+.++..+++..+..|- .+++-|
T Consensus 142 ~~e~~~A~~~i~~~Gn~~i~L~~ 164 (280)
T 2qkf_A 142 PSQMKNIVEKFHEAGNGKLILCE 164 (280)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEE
Confidence 8888888888888774 555555
No 168
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=65.09 E-value=29 Score=34.41 Aligned_cols=128 Identities=10% Similarity=0.093 Sum_probs=80.7
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC---cCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHc---CCCCEEEe
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD---QDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQK---KSCNGLLL 384 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~---~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~---~a~d~i~i 384 (472)
.++.++-+++ .+.|++.++..||=-++ +.|++..+++++... +.+++=- ..+..++...++. -.++.|.+
T Consensus 30 ~~~~~~Kl~i-a~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~--r~~~~di~~a~~al~~ag~~~v~i 106 (370)
T 3rmj_A 30 AMTKEEKIRV-ARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLS--RAIERDIRQAGEAVAPAPKKRIHT 106 (370)
T ss_dssp CCCHHHHHHH-HHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSSSEEEEEE--ESSHHHHHHHHHHHTTSSSEEEEE
T ss_pred CcCHHHHHHH-HHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCCCeEEEEe--cCCHHHHHHHHHHHhhCCCCEEEE
Confidence 5789999887 56688999999987443 467777777776654 4443221 1257888877661 23555554
Q ss_pred ccC-------------CcccHHHHHHHHHHHHHcCCcEEecCCC-CCChhhH---HHHHHHhhcCCCcccCCCCC
Q 012041 385 KVN-------------QIGTVTESIQAALDSKSAGWGVMVSHRS-GETEDNF---IADLSVGLASGQIKTGAPCR 442 (472)
Q Consensus 385 k~~-------------k~GGitea~~ia~~A~a~g~~~~v~~~~-~Et~~s~---~a~lAva~~~~~i~~g~~~~ 442 (472)
-.. .-.-+..+.+++++|+.+|..+.+++.. +.+...+ .+..+...++..+.+.+..+
T Consensus 107 f~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G 181 (370)
T 3rmj_A 107 FIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVG 181 (370)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCccC
Confidence 322 1122445566788999999998777632 2233333 45556667888887666543
No 169
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=65.04 E-value=59 Score=31.79 Aligned_cols=67 Identities=9% Similarity=0.131 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhhCCeeEEe-CC--------------CCcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcC
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIE-DP--------------FDQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKK 377 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iE-dP--------------~~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~ 377 (472)
+.++..++ .+.+++.++.+|- .+ .++.+++..+++++.+ ++||++.-- +++++++.++++ +
T Consensus 142 ~~~~~~~~-a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGg-I~s~eda~~~l~-G 218 (350)
T 3b0p_A 142 TYRGLAQS-VEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGG-IRSLEEALFHLK-R 218 (350)
T ss_dssp CHHHHHHH-HHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESS-CCSHHHHHHHHT-T
T ss_pred cHHHHHHH-HHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECC-cCCHHHHHHHHh-C
Confidence 44556655 5567777755442 11 1234788889999998 799877664 578999999997 5
Q ss_pred CCCEEEe
Q 012041 378 SCNGLLL 384 (472)
Q Consensus 378 a~d~i~i 384 (472)
+|.|++
T Consensus 219 -aD~V~i 224 (350)
T 3b0p_A 219 -VDGVML 224 (350)
T ss_dssp -SSEEEE
T ss_pred -CCEEEE
Confidence 999986
No 170
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=64.83 E-value=4.7 Score=39.20 Aligned_cols=62 Identities=16% Similarity=0.389 Sum_probs=42.6
Q ss_pred HHHHhhCCeeEE-------eCCC-CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 323 KEFVRDFPIVSI-------EDPF-DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 323 ~~~l~~~~l~~i-------EdP~-~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
.+.+++.++.+| ++-. .+-+++..+++++ ++||+++-- +.+++++.++++...+|.|++-=.
T Consensus 146 a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~Gg-I~s~~da~~~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 146 YRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGD-IFTPEDAKRALEESGCDGLLVARG 215 (318)
T ss_dssp HHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESS-CCSHHHHHHHHHHHCCSEEEESGG
T ss_pred HHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECC-cCCHHHHHHHHHcCCCCEEEECHH
Confidence 556777887666 2321 2245555666666 788887764 578999999999767999987543
No 171
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=63.15 E-value=54 Score=33.93 Aligned_cols=106 Identities=8% Similarity=0.147 Sum_probs=66.8
Q ss_pred CCeeEE--eCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC-------------cccH
Q 012041 329 FPIVSI--EDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ-------------IGTV 392 (472)
Q Consensus 329 ~~l~~i--EdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k-------------~GGi 392 (472)
.+..++ .+|-...-++..+++++..+ +||++.+ +.+.++++.+++.+ +|++.+...- ...+
T Consensus 269 vd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~--v~t~e~a~~~~~aG-ad~i~vg~g~gsi~~~~~~~g~g~p~~ 345 (511)
T 3usb_A 269 VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN--VATAEATKALIEAG-ANVVKVGIGPGSICTTRVVAGVGVPQL 345 (511)
T ss_dssp CSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCSTTCCHHHHHCCCCCHH
T ss_pred cceEEecccccchhhhhhHHHHHHHhCCCceEEeee--eccHHHHHHHHHhC-CCEEEECCCCccccccccccCCCCCcH
Confidence 344444 23433344467788888886 8998887 35788888888876 6888763311 2236
Q ss_pred HHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 393 TESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 393 tea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
+...++++.++..+++++...... +.... --|+++++..+.+|..
T Consensus 346 ~~l~~v~~~~~~~~iPVIa~GGI~-~~~di--~kala~GA~~V~vGs~ 390 (511)
T 3usb_A 346 TAVYDCATEARKHGIPVIADGGIK-YSGDM--VKALAAGAHVVMLGSM 390 (511)
T ss_dssp HHHHHHHHHHHTTTCCEEEESCCC-SHHHH--HHHHHTTCSEEEESTT
T ss_pred HHHHHHHHHHHhCCCcEEEeCCCC-CHHHH--HHHHHhCchhheecHH
Confidence 666778888888899987655322 22222 2235556777777765
No 172
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=62.33 E-value=26 Score=33.52 Aligned_cols=46 Identities=11% Similarity=0.129 Sum_probs=35.6
Q ss_pred CHHHHHHHHhhc--CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCc
Q 012041 342 DWSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQI 389 (472)
Q Consensus 342 D~~~~~~L~~~~--~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~ 389 (472)
.++..+++++.+ ++||++.-- +.+++++.+++..+ +|.+++--.-.
T Consensus 228 ~~~~i~~v~~~~~~~ipvi~~GG-I~~~~da~~~l~~G-Ad~V~vg~~~l 275 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQIIGTGG-IETGQDAFEHLLCG-ATMLQIGTALH 275 (311)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESS-CCSHHHHHHHHHHT-CSEEEECHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEchHHH
Confidence 366778888888 699977764 67899999999887 89998754433
No 173
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=60.40 E-value=92 Score=28.40 Aligned_cols=78 Identities=13% Similarity=0.006 Sum_probs=48.6
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccH-------HHHHHHHHHHHHcCCcEEecCCCCCChhhHHH
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTV-------TESIQAALDSKSAGWGVMVSHRSGETEDNFIA 424 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGi-------tea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a 424 (472)
..|+.|+.|+. -+....+..+... -.|+|.||..-+-++ .-...++.+|+..|+.+++.+ .|+... .
T Consensus 150 ~~G~~ialDdf-G~g~ssl~~L~~l-~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG--VEt~~~--~ 223 (259)
T 3s83_A 150 DAGAGLALDDF-GTGFSSLSYLTRL-PFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG--VENAEM--A 223 (259)
T ss_dssp HHTCEEEEECC----CHHHHHHHHS-CCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC--CCSHHH--H
T ss_pred HCCCEEEEECC-CCCchhHHHHHhC-CCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe--CCCHHH--H
Confidence 44899999994 5555666555443 589999996443322 225668899999999986554 566543 3
Q ss_pred HHHHhhcCCCc
Q 012041 425 DLSVGLASGQI 435 (472)
Q Consensus 425 ~lAva~~~~~i 435 (472)
+....+++.+.
T Consensus 224 ~~l~~lG~~~~ 234 (259)
T 3s83_A 224 HALQSLGCDYG 234 (259)
T ss_dssp HHHHHHTCCEE
T ss_pred HHHHhcCCCEe
Confidence 44444455443
No 174
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=60.38 E-value=32 Score=33.89 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=48.5
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
++.++ .+.+.+.+++++|.|+=+|++.++++-+.++- .+ ..|...|. ++..-++.+.+. ---+.++.+-. +
T Consensus 88 l~~e~-~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~--v~~~KI~S~~~--~n~~LL~~va~~--gkPviLstGma-t 159 (349)
T 2wqp_A 88 LNEED-EIKLKEYVESKGMIFISTLFSRAAALRLQRMD--IPAYKIGSGEC--NNYPLIKLVASF--GKPIILSTGMN-S 159 (349)
T ss_dssp CCHHH-HHHHHHHHHHTTCEEEEEECSHHHHHHHHHHT--CSCEEECGGGT--TCHHHHHHHHTT--CSCEEEECTTC-C
T ss_pred CCHHH-HHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcC--CCEEEECcccc--cCHHHHHHHHhc--CCeEEEECCCC-C
Confidence 44444 44568889999999999999887776665541 22 34445542 342333333221 22344444443 5
Q ss_pred HHHHHHHHHHHHHcCCcE
Q 012041 392 VTESIQAALDSKSAGWGV 409 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~ 409 (472)
+.|+..++++..+.|.++
T Consensus 160 ~~Ei~~Ave~i~~~G~~i 177 (349)
T 2wqp_A 160 IESIKKSVEIIREAGVPY 177 (349)
T ss_dssp HHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHcCCCE
Confidence 555555555555444333
No 175
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=59.97 E-value=23 Score=33.90 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=28.1
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHH
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSW 346 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~ 346 (472)
++..++-++.+.+.++++++.++=+|+++++.+-+
T Consensus 73 G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l 107 (285)
T 3sz8_A 73 GVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPV 107 (285)
T ss_dssp CSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHH
T ss_pred CcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 44566778888898899999999999998776554
No 176
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=59.84 E-value=27 Score=33.54 Aligned_cols=93 Identities=17% Similarity=0.154 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccH
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTV 392 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGi 392 (472)
..++-++.+.+.++++++-++=+|+++++.+-+.+ ..+ ..|.+.+ +++.. +.+.+. +.---|.+|-+..|++
T Consensus 73 ~l~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~--~~n~~-Ll~~~a-~~~kPV~lk~G~~~t~ 145 (292)
T 1o60_A 73 GMEEGLKIFQELKDTFGVKIITDVHEIYQCQPVAD---VVDIIQLPAFL--ARQTD-LVEAMA-KTGAVINVKKPQFLSP 145 (292)
T ss_dssp CHHHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT---TCSEEEECGGG--TTCHH-HHHHHH-HTTCEEEEECCTTSCG
T ss_pred hHHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh---cCCEEEECccc--ccCHH-HHHHHH-cCCCcEEEeCCCCCCH
Confidence 34666777788888999999999999888776654 344 4555555 24434 333333 3456777888887788
Q ss_pred HHHHHHHHHHHHcCC-cEEecC
Q 012041 393 TESIQAALDSKSAGW-GVMVSH 413 (472)
Q Consensus 393 tea~~ia~~A~a~g~-~~~v~~ 413 (472)
.++..+++.++..|- .+++-|
T Consensus 146 ~ei~~Av~~i~~~Gn~~i~L~~ 167 (292)
T 1o60_A 146 SQMGNIVEKIEECGNDKIILCD 167 (292)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEE
Confidence 888888888777774 555544
No 177
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=58.68 E-value=58 Score=33.49 Aligned_cols=106 Identities=6% Similarity=0.104 Sum_probs=64.7
Q ss_pred CCeeEEe----CCCCcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC---C----------cc
Q 012041 329 FPIVSIE----DPFDQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN---Q----------IG 390 (472)
Q Consensus 329 ~~l~~iE----dP~~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~---k----------~G 390 (472)
.+...|+ .+....-++..+++++.. ++||+++. +.+++.++.+++.+ +|++.+-.+ . ..
T Consensus 240 aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~--v~t~e~a~~l~~aG-aD~I~vg~g~Gs~~~t~~~~g~g~p 316 (490)
T 4avf_A 240 AGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN--IATAEAAKALAEAG-ADAVKVGIGPGSICTTRIVAGVGVP 316 (490)
T ss_dssp TTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTCHHHHHTCBCCC
T ss_pred cccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee--eCcHHHHHHHHHcC-CCEEEECCCCCcCCCccccCCCCcc
Confidence 4544444 333344457888999998 58998875 45788888888876 788876211 1 12
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 391 TVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 391 Gitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
.++...++++.++..+++++..... -+...... ++++++..+.+|..
T Consensus 317 ~~~~l~~v~~~~~~~~iPVIa~GGI-~~~~di~k--al~~GAd~V~vGs~ 363 (490)
T 4avf_A 317 QISAIANVAAALEGTGVPLIADGGI-RFSGDLAK--AMVAGAYCVMMGSM 363 (490)
T ss_dssp HHHHHHHHHHHHTTTTCCEEEESCC-CSHHHHHH--HHHHTCSEEEECTT
T ss_pred HHHHHHHHHHHhccCCCcEEEeCCC-CCHHHHHH--HHHcCCCeeeecHH
Confidence 3455566777776779998765432 22222222 34456666666654
No 178
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=57.25 E-value=60 Score=33.20 Aligned_cols=107 Identities=8% Similarity=0.150 Sum_probs=62.3
Q ss_pred HhhCCeeEEeCCC----CcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC------------
Q 012041 326 VRDFPIVSIEDPF----DQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ------------ 388 (472)
Q Consensus 326 l~~~~l~~iEdP~----~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k------------ 388 (472)
+.+.++..|+=-+ ....++..+++++.+ ++||+.+. +.++++++.+.+.+ +|+|.+-..-
T Consensus 245 l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~--~~t~e~a~~l~~~G-~d~I~v~~~~G~~~~~~~~~~~ 321 (494)
T 1vrd_A 245 LVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGN--VATPEGTEALIKAG-ADAVKVGVGPGSICTTRVVAGV 321 (494)
T ss_dssp HHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTCHHHHHHCC
T ss_pred HHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCC--cCCHHHHHHHHHcC-CCEEEEcCCCCccccccccCCC
Confidence 3445544444222 223567888999998 58987664 45789998888776 8998873210
Q ss_pred -cccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccC
Q 012041 389 -IGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTG 438 (472)
Q Consensus 389 -~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g 438 (472)
...++...++++.++..+++++..+. ..+...... ++++++..+..|
T Consensus 322 g~p~~~~l~~v~~~~~~~~ipvia~GG-I~~~~di~k--ala~GAd~V~iG 369 (494)
T 1vrd_A 322 GVPQLTAVMECSEVARKYDVPIIADGG-IRYSGDIVK--ALAAGAESVMVG 369 (494)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCEEEESC-CCSHHHHHH--HHHTTCSEEEES
T ss_pred CccHHHHHHHHHHHHhhcCCCEEEECC-cCCHHHHHH--HHHcCCCEEEEC
Confidence 11233444555555567899876553 233333333 334456666544
No 179
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=56.67 E-value=79 Score=31.20 Aligned_cols=92 Identities=10% Similarity=0.128 Sum_probs=58.0
Q ss_pred HHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEec--c-CCc----------ccHHHHHHHHHHHHHcCCc
Q 012041 343 WSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLK--V-NQI----------GTVTESIQAALDSKSAGWG 408 (472)
Q Consensus 343 ~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik--~-~k~----------GGitea~~ia~~A~a~g~~ 408 (472)
.+..+++++.. +++|+++. +.++++++++++.+ +|+|.+- + +.| ..++...++++.++..+++
T Consensus 137 ~~~I~~ik~~~p~v~Vi~G~--v~t~e~A~~a~~aG-AD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iP 213 (366)
T 4fo4_A 137 LQRIRETRAAYPHLEIIGGN--VATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIP 213 (366)
T ss_dssp HHHHHHHHHHCTTCEEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCC
T ss_pred HHHHHHHHHhcCCCceEeee--eCCHHHHHHHHHcC-CCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCe
Confidence 35567888887 68987765 45789999988875 7888872 1 112 2345556666677778999
Q ss_pred EEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 409 VMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 409 ~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
++...... +... +.-++++++..+..|..
T Consensus 214 VIA~GGI~-~~~d--i~kala~GAd~V~vGs~ 242 (366)
T 4fo4_A 214 VIADGGIR-FSGD--ISKAIAAGASCVMVGSM 242 (366)
T ss_dssp EEEESCCC-SHHH--HHHHHHTTCSEEEESTT
T ss_pred EEEeCCCC-CHHH--HHHHHHcCCCEEEEChH
Confidence 87644322 2222 23345556777766654
No 180
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=55.15 E-value=1.6e+02 Score=28.94 Aligned_cols=94 Identities=13% Similarity=0.138 Sum_probs=58.4
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC----CcccHHHHHHHHHHHHHc--CCcEEecCC
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN----QIGTVTESIQAALDSKSA--GWGVMVSHR 414 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~----k~GGitea~~ia~~A~a~--g~~~~v~~~ 414 (472)
-+|+..++|++.+++||+.-+. .++++.+.+.+.+ +|+|.+.-. .-|+...+.-+..++++. .++++..+
T Consensus 204 ~~w~~i~~lr~~~~~PvivK~v--~~~e~A~~a~~~G-aD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~G- 279 (352)
T 3sgz_A 204 FCWNDLSLLQSITRLPIILKGI--LTKEDAELAMKHN-VQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDG- 279 (352)
T ss_dssp CCHHHHHHHHHHCCSCEEEEEE--CSHHHHHHHHHTT-CSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEES-
T ss_pred CCHHHHHHHHHhcCCCEEEEec--CcHHHHHHHHHcC-CCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEEC-
Confidence 4778899999999999988874 4688888877765 788876321 112333333344444444 58876544
Q ss_pred CCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 415 SGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 415 ~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
...++....-. +++++..+.+|.+
T Consensus 280 GI~~g~Dv~ka--LalGA~aV~iGr~ 303 (352)
T 3sgz_A 280 GVRTGTDVLKA--LALGARCIFLGRP 303 (352)
T ss_dssp SCCSHHHHHHH--HHTTCSEEEESHH
T ss_pred CCCCHHHHHHH--HHcCCCEEEECHH
Confidence 23444443344 4457777777654
No 181
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=55.00 E-value=26 Score=32.74 Aligned_cols=93 Identities=16% Similarity=0.134 Sum_probs=64.6
Q ss_pred cCHHHHHHHHHHHHhhCC---eeEE-eCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC
Q 012041 313 LSAQSLGDLYKEFVRDFP---IVSI-EDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ 388 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~---l~~i-EdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k 388 (472)
.++.+..+ ..++.+ |..+ ++.+-....+.++.+++.+++||.-.+ +..+.+++..+...| +|.+.+...-
T Consensus 65 ~~p~~~A~----~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~lPvl~kd-fI~d~~qi~~a~~~G-AD~VlL~~~~ 138 (254)
T 1vc4_A 65 VDPVEAAL----AYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKD-FVVDPFMLEEARAFG-ASAALLIVAL 138 (254)
T ss_dssp CCHHHHHH----HHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCCSCEEEES-CCCSHHHHHHHHHTT-CSEEEEEHHH
T ss_pred CCHHHHHH----HHHHcCCCEEEEecchhhhccCHHHHHHHHHhcCCCEEECC-cCCCHHHHHHHHHcC-CCEEEECccc
Confidence 45555433 344555 3333 444445588999999999999997777 467788888776665 7888776654
Q ss_pred cccHHHHHHHHHHHHHcCCcEEecC
Q 012041 389 IGTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 389 ~GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
.. ..+.++...|+..|+.+++-.
T Consensus 139 l~--~~l~~l~~~a~~lGl~~lvev 161 (254)
T 1vc4_A 139 LG--ELTGAYLEEARRLGLEALVEV 161 (254)
T ss_dssp HG--GGHHHHHHHHHHHTCEEEEEE
T ss_pred hH--HHHHHHHHHHHHCCCeEEEEE
Confidence 43 577888888999999976543
No 182
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=54.31 E-value=41 Score=33.17 Aligned_cols=44 Identities=5% Similarity=-0.060 Sum_probs=34.8
Q ss_pred CCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 341 DDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 341 ~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
-+++..+++++.. .+||++.-- +.+.+|+.+++..+ +|.|++--
T Consensus 263 ~a~~~i~~v~~~~~~ipII~~GG-I~s~~da~~~l~aG-Ad~V~vgr 307 (354)
T 4ef8_A 263 TALANINAFYRRCPGKLIFGCGG-VYTGEDAFLHVLAG-ASMVQVGT 307 (354)
T ss_dssp HHHHHHHHHHHHCTTSEEEEESC-CCSHHHHHHHHHHT-EEEEEECH
T ss_pred HHHHHHHHHHHhCCCCCEEEECC-cCCHHHHHHHHHcC-CCEEEEhH
Confidence 4577788888887 499987764 67899999999877 79988743
No 183
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=53.46 E-value=69 Score=31.51 Aligned_cols=92 Identities=10% Similarity=0.230 Sum_probs=57.2
Q ss_pred HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEecc-------CC------cccHHHHHHHHHHHHHcCCcE
Q 012041 343 WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV-------NQ------IGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~-------~k------~GGitea~~ia~~A~a~g~~~ 409 (472)
.+..+++++.+++||+... +.+++.++.+++.+ +|+|.+-. .+ ...++...++++.++..++++
T Consensus 134 ~~~i~~i~~~~~~~Vivg~--v~t~e~A~~l~~aG-aD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPV 210 (361)
T 3khj_A 134 IRTLKEIKSKMNIDVIVGN--VVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPI 210 (361)
T ss_dssp HHHHHHHHHHCCCEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHhcCCcEEEcc--CCCHHHHHHHHHcC-cCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeE
Confidence 3566778888899998765 45788888888775 68887621 00 223555666777777789998
Q ss_pred EecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 410 MVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 410 ~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
+..... .+.... .-++++++..+..|..
T Consensus 211 IA~GGI-~~~~di--~kala~GAd~V~vGs~ 238 (361)
T 3khj_A 211 IADGGI-RYSGDI--GKALAVGASSVMIGSI 238 (361)
T ss_dssp EEESCC-CSHHHH--HHHHHHTCSEEEESTT
T ss_pred EEECCC-CCHHHH--HHHHHcCCCEEEEChh
Confidence 765532 222222 2234445666655543
No 184
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=53.14 E-value=90 Score=29.66 Aligned_cols=128 Identities=9% Similarity=0.058 Sum_probs=79.3
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCCc---CCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHc---CCCCEEEe
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFDQ---DDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQK---KSCNGLLL 384 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~~---~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~---~a~d~i~i 384 (472)
.++.++-+++ .+.|.+.++..||=-++. .|++..+++++..+ +.+++=- .....++...++. -.++.|.+
T Consensus 23 ~~~~~~K~~i-~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~--~~~~~di~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 23 NFDVKEKIQI-ALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLA--RCVEGDIDRAEEALKDAVSPQIHI 99 (293)
T ss_dssp CCCHHHHHHH-HHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEE--ESSHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEe--cCCHHHHHHHHHHHhhcCCCEEEE
Confidence 5788998887 556888999999976543 46777777776654 5543321 1245677777663 23565554
Q ss_pred ccC-------------CcccHHHHHHHHHHHHHcCCcEEecCCC-CCChhhH---HHHHHHhhcCCCcccCCCCC
Q 012041 385 KVN-------------QIGTVTESIQAALDSKSAGWGVMVSHRS-GETEDNF---IADLSVGLASGQIKTGAPCR 442 (472)
Q Consensus 385 k~~-------------k~GGitea~~ia~~A~a~g~~~~v~~~~-~Et~~s~---~a~lAva~~~~~i~~g~~~~ 442 (472)
-.+ .--.+..+.+++++|+++|..+.++... +.+.... .+..+...++..+.+.+..+
T Consensus 100 ~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G 174 (293)
T 3ewb_X 100 FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVG 174 (293)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC
Confidence 221 1123445678888999999998665421 1223333 45556667888887666544
No 185
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=52.71 E-value=30 Score=34.52 Aligned_cols=81 Identities=7% Similarity=0.094 Sum_probs=44.1
Q ss_pred HHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHH
Q 012041 319 GDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQ 397 (472)
Q Consensus 319 i~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ 397 (472)
.+.+.+.+++++|.|+=+|++.++++-+.++ ..+ ..|...|. ++..-++.+.+. ---|.++.+-. ++.|+..
T Consensus 103 ~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~--~vd~~KIgS~~~--~N~pLL~~va~~--gKPViLStGma-Tl~Ei~~ 175 (385)
T 1vli_A 103 ILPLLDYCREKQVIFLSTVCDEGSADLLQST--SPSAFKIASYEI--NHLPLLKYVARL--NRPMIFSTAGA-EISDVHE 175 (385)
T ss_dssp HHHHHHHHHHTTCEEECBCCSHHHHHHHHTT--CCSCEEECGGGT--TCHHHHHHHHTT--CSCEEEECTTC-CHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEccCCHHHHHHHHhc--CCCEEEECcccc--cCHHHHHHHHhc--CCeEEEECCCC-CHHHHHH
Confidence 3455788899999999999987766655443 122 34555552 343333333221 22344444443 5555555
Q ss_pred HHHHHHHcC
Q 012041 398 AALDSKSAG 406 (472)
Q Consensus 398 ia~~A~a~g 406 (472)
+++++++.|
T Consensus 176 Ave~i~~~G 184 (385)
T 1vli_A 176 AWRTIRAEG 184 (385)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHCC
Confidence 555555444
No 186
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=52.63 E-value=1.2e+02 Score=28.47 Aligned_cols=119 Identities=12% Similarity=0.057 Sum_probs=70.2
Q ss_pred CccCHHHHHHHHHHHHhh--CCeeEE------eCCCCcCCHHHHHHHHhhc---C---CeEEeCCccccCHHHHHHHHHc
Q 012041 311 HVLSAQSLGDLYKEFVRD--FPIVSI------EDPFDQDDWSSWASLQSSV---D---IQLVGDDLLVTNPKRIAEAIQK 376 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~--~~l~~i------EdP~~~~D~~~~~~L~~~~---~---~pI~~dE~~~~~~~~~~~~i~~ 376 (472)
.-.|++||++. +++..+ ++..|| |++.---|....-+..+.+ + +|+|.|+. .-.+++.+.
T Consensus 82 g~~ta~eAv~~-a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~-----~~akrl~~~ 155 (265)
T 1wv2_A 82 GCYDAVEAVRT-CRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDP-----IIARQLAEI 155 (265)
T ss_dssp TCCSHHHHHHH-HHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCH-----HHHHHHHHS
T ss_pred CCCCHHHHHHH-HHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCH-----HHHHHHHHh
Confidence 34589999976 777666 345566 4444445666665555555 5 56777763 445555555
Q ss_pred CCCCEEEeccCCcc---cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCC
Q 012041 377 KSCNGLLLKVNQIG---TVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGA 439 (472)
Q Consensus 377 ~a~d~i~ik~~k~G---Gitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~ 439 (472)
.++++.+-...+| |+++.--+-.+.+..++++++....+ +. .-+..++-+++.-+..|.
T Consensus 156 -G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~-TP--sDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 156 -GCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVG-TA--SDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp -CCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCC-SH--HHHHHHHHHTCSEEEESH
T ss_pred -CCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCC-CH--HHHHHHHHcCCCEEEECh
Confidence 4788877443333 45555455566667789988765332 22 223444555666665544
No 187
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=52.34 E-value=19 Score=34.70 Aligned_cols=35 Identities=3% Similarity=0.224 Sum_probs=26.4
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHH
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSW 346 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~ 346 (472)
++..++-++.+.+.++++++.++=+|+++++.+-+
T Consensus 94 Glg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l 128 (298)
T 3fs2_A 94 GIGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAV 128 (298)
T ss_dssp -CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 34456778888888889999999999987655443
No 188
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=52.17 E-value=93 Score=31.97 Aligned_cols=94 Identities=10% Similarity=0.143 Sum_probs=59.9
Q ss_pred CCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC---Cc----------ccHHHHHHHHHHHHHcC
Q 012041 341 DDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN---QI----------GTVTESIQAALDSKSAG 406 (472)
Q Consensus 341 ~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~---k~----------GGitea~~ia~~A~a~g 406 (472)
.-++..+++++.. ++||+++. +.+++.++.+++.+ +|++.+-.+ .| ..++...++++.++..+
T Consensus 258 ~~~~~i~~ir~~~p~~~Vi~g~--v~t~e~a~~l~~aG-aD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~ 334 (496)
T 4fxs_A 258 GVLQRIRETRAAYPHLEIIGGN--VATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYG 334 (496)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHCCCceEEEcc--cCcHHHHHHHHHhC-CCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCC
Confidence 3457788899988 58988865 45678888888876 788875311 11 23455677777777889
Q ss_pred CcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 407 WGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 407 ~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
++++..... -+.... .-|+++++..+.+|..
T Consensus 335 iPVIa~GGI-~~~~di--~kala~GAd~V~iGs~ 365 (496)
T 4fxs_A 335 IPVIADGGI-RFSGDI--SKAIAAGASCVMVGSM 365 (496)
T ss_dssp CCEEEESCC-CSHHHH--HHHHHTTCSEEEESTT
T ss_pred CeEEEeCCC-CCHHHH--HHHHHcCCCeEEecHH
Confidence 998765532 222222 2234456777776654
No 189
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=52.14 E-value=32 Score=34.09 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=35.2
Q ss_pred CHHHHHHHHhhc--CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 342 DWSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 342 D~~~~~~L~~~~--~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
.++..+++++.+ .+||++.-- +.+.+|+.++++.+ +|.|++--.
T Consensus 284 a~~~v~~i~~~v~~~ipvI~~GG-I~s~~da~~~l~~G-Ad~V~vgra 329 (367)
T 3zwt_A 284 STQTIREMYALTQGRVPIIGVGG-VSSGQDALEKIRAG-ASLVQLYTA 329 (367)
T ss_dssp HHHHHHHHHHHTTTCSCEEEESS-CCSHHHHHHHHHHT-CSEEEESHH
T ss_pred HHHHHHHHHHHcCCCceEEEECC-CCCHHHHHHHHHcC-CCEEEECHH
Confidence 356778888998 689987764 67899999999987 699997544
No 190
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=52.09 E-value=54 Score=30.92 Aligned_cols=96 Identities=14% Similarity=0.040 Sum_probs=70.1
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcc
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIG 390 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~G 390 (472)
++..++-++.+.+.++++++-++=+|+++++.+-.++ ..+ +.|-+-+ +++.. +.+.+. +.--.|.+|-+..|
T Consensus 57 G~g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~---~vd~~~IgA~~--~rn~~-ll~~~a-~~~~PV~lK~G~~~ 129 (267)
T 2nwr_A 57 GHGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAE---VADIIQIPAFL--CRQTD-LLLAAA-KTGRAVNVKKGQFL 129 (267)
T ss_dssp CSCHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHT---TCSEEEECGGG--TTCHH-HHHHHH-TTTSEEEEECCTTC
T ss_pred CccHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHh---cCCEEEECccc--ccCHH-HHHHHH-cCCCcEEEeCCCCC
Confidence 3446777778888888999999999999888776655 345 4655555 34544 444443 55678899999989
Q ss_pred cHHHHHHHHHHHHHcCC-cEEecCC
Q 012041 391 TVTESIQAALDSKSAGW-GVMVSHR 414 (472)
Q Consensus 391 Gitea~~ia~~A~a~g~-~~~v~~~ 414 (472)
++.+++.+++..+..|- .+++-|+
T Consensus 130 t~~e~~~Av~~i~~~GN~~i~L~~r 154 (267)
T 2nwr_A 130 APWDTKNVVEKLKFGGAKEIYLTER 154 (267)
T ss_dssp CGGGGHHHHHHHHHTTCSSEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 99999999999888874 5666553
No 191
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=51.89 E-value=54 Score=33.83 Aligned_cols=109 Identities=13% Similarity=0.140 Sum_probs=67.8
Q ss_pred HhhCCeeEEeCCCC----cCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC-----------c
Q 012041 326 VRDFPIVSIEDPFD----QDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ-----------I 389 (472)
Q Consensus 326 l~~~~l~~iEdP~~----~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k-----------~ 389 (472)
+.+.+...||=-.. ...++-.+++++.+ ++||++.+ +.+.+.++.+.+.+ +|+|.+-..- .
T Consensus 263 ~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~--v~t~~~a~~l~~aG-ad~I~vg~~~G~~~~t~~~~~~ 339 (514)
T 1jcn_A 263 LTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGN--VVTAAQAKNLIDAG-VDGLRVGMGCGSICITQEVMAC 339 (514)
T ss_dssp HHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCSCCBTTBCCCSC
T ss_pred HHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecc--cchHHHHHHHHHcC-CCEEEECCCCCcccccccccCC
Confidence 34466666662111 12346788899998 69998876 35788988888877 7988773210 2
Q ss_pred c--cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 390 G--TVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 390 G--Gitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
| ..+....+.++++..+++++..... .+.... .-++++++..+..|.+
T Consensus 340 g~~~~~~~~~~~~~~~~~~ipVia~GGI-~~~~di--~kala~GAd~V~iG~~ 389 (514)
T 1jcn_A 340 GRPQGTAVYKVAEYARRFGVPIIADGGI-QTVGHV--VKALALGASTVMMGSL 389 (514)
T ss_dssp CCCHHHHHHHHHHHHGGGTCCEEEESCC-CSHHHH--HHHHHTTCSEEEESTT
T ss_pred CccchhHHHHHHHHHhhCCCCEEEECCC-CCHHHH--HHHHHcCCCeeeECHH
Confidence 2 3556667777888889998765432 222222 2334455666665553
No 192
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=50.84 E-value=37 Score=33.89 Aligned_cols=94 Identities=21% Similarity=0.180 Sum_probs=59.0
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcc
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIG 390 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~G 390 (472)
++.. +.++.+.+.++++++.++=+|+++++.+-..++ .+ +.|.+.+ +++ .++.+.+.. .--.|++|-+..+
T Consensus 189 gl~~-egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd~lkIgs~~--~~n-~~LL~~~a~-~gkPVilk~G~~~ 260 (385)
T 3nvt_A 189 GLGL-EGLKILKRVSDEYGLGVISEIVTPADIEVALDY---VDVIQIGARN--MQN-FELLKAAGR-VDKPILLKRGLSA 260 (385)
T ss_dssp CCTH-HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT---CSEEEECGGG--TTC-HHHHHHHHT-SSSCEEEECCTTC
T ss_pred CCCH-HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh---CCEEEECccc--ccC-HHHHHHHHc-cCCcEEEecCCCC
Confidence 3444 455667888888999999999999887766553 44 4555555 234 333333322 2345667777767
Q ss_pred cHHHHHHHHHHHHHcCC-cEEecC
Q 012041 391 TVTESIQAALDSKSAGW-GVMVSH 413 (472)
Q Consensus 391 Gitea~~ia~~A~a~g~-~~~v~~ 413 (472)
++.++..+++...+.|- ++++-|
T Consensus 261 t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 261 TIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEE
Confidence 77777777777776653 455544
No 193
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=50.78 E-value=72 Score=30.79 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEE---ecccccccc------------cC-cceeecCCCCCCCCCCccCHHHHHHHHHH
Q 012041 261 REGLVLLTDAIEKAGYTGKINIGM---DVAASEFFT------------KD-GNYDLNFKKQPNDGAHVLSAQSLGDLYKE 324 (472)
Q Consensus 261 ~~~l~~v~~av~~~g~~g~i~l~v---D~~a~~~~~------------~~-~~y~~~~~~~~~~~n~~~s~~eai~~~~~ 324 (472)
.-++.++|+++++.|+. ++.||- -. ++.||. .| ..|+.+.. +..||++....
T Consensus 174 DGrV~aIR~aLd~~G~~-~v~ImsYsaKy-ASafYGPFRdAa~Sap~fGDrktYQmdpa----------N~~EAlrE~~~ 241 (328)
T 1w1z_A 174 DGRIGAIREALDETDHS-DVGILSYAAKY-ASSFYGPFRDALHSAPQFGDKSTYQMNPA----------NTEEAMKEVEL 241 (328)
T ss_dssp TTHHHHHHHHHHHTTCT-TSEEEEEEEEB-CCTTCHHHHHHTTCCCCCSCSTTTSBCTT----------CSHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCC-CceeeehhHHH-hhhccchHHHHhccCCCCCCccccCCCCC----------CHHHHHHHHHh
Confidence 45788999999999884 677763 22 233441 11 45766532 34566655443
Q ss_pred HHhh-CCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 325 FVRD-FPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 325 ~l~~-~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
-+++ .++.++-=-++ -++-.+++++++.+|+++-..+ .-..-++...++|..|
T Consensus 242 Di~EGAD~vMVKPal~--YLDIir~vk~~~~~P~aaYqVS-GEYAMikaAa~~GwiD 295 (328)
T 1w1z_A 242 DIVEGADIVMVKPGLA--YLDIVWRTKERFDVPVAIYHVS-GEYAMVKAAAAKGWID 295 (328)
T ss_dssp HHHHTCSEEEEESCGG--GHHHHHHHHHHHCSCEEEEECH-HHHHHHHHHHHTTSSC
T ss_pred hHHhCCCEEEEcCCCc--hHHHHHHHHHhcCCCEEEEEcc-HHHHHHHHHHHcCCcc
Confidence 3444 77888886666 4677899999999999887743 2235666677787777
No 194
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=49.97 E-value=67 Score=30.11 Aligned_cols=93 Identities=15% Similarity=0.221 Sum_probs=67.9
Q ss_pred cCHHHHHHHHHHHHhhC--CeeEE-eCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCc
Q 012041 313 LSAQSLGDLYKEFVRDF--PIVSI-EDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQI 389 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~--~l~~i-EdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~ 389 (472)
.++.+..+++ +.. -|.-+ |+++=...++.++++++.+++||.--+. +-+++++.+.-..| +|+|.+-+.-.
T Consensus 64 ~dp~~iA~~~----~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v~lPvLrKDF-iid~yQI~eAr~~G-ADaILLI~a~L 137 (258)
T 4a29_A 64 RDPIEYAKFM----ERYAVGLSITTEEKYFNGSYETLRKIASSVSIPILMSDF-IVKESQIDDAYNLG-ADTVLLIVKIL 137 (258)
T ss_dssp CCHHHHHHHH----TTTCSEEEEECCSTTTCCCHHHHHHHHTTCSSCEEEESC-CCSHHHHHHHHHHT-CSEEEEEGGGS
T ss_pred CCHHHHHHHH----hCCCeEEEEeCCCCCCCCCHHHHHHHHHhcCCCEeeccc-cccHHHHHHHHHcC-CCeeehHHhhc
Confidence 4566554442 321 25544 6677788999999999999999988884 56788887765554 78888766555
Q ss_pred ccHHHHHHHHHHHHHcCCcEEec
Q 012041 390 GTVTESIQAALDSKSAGWGVMVS 412 (472)
Q Consensus 390 GGitea~~ia~~A~a~g~~~~v~ 412 (472)
. -.+..+..++|+..|+.+.+-
T Consensus 138 ~-~~~l~~l~~~A~~lGl~~LvE 159 (258)
T 4a29_A 138 T-ERELESLLEYARSYGMEPLIL 159 (258)
T ss_dssp C-HHHHHHHHHHHHHTTCCCEEE
T ss_pred C-HHHHHHHHHHHHHHhHHHHHh
Confidence 3 567889999999999998663
No 195
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=49.69 E-value=1e+02 Score=28.61 Aligned_cols=115 Identities=10% Similarity=-0.055 Sum_probs=65.3
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCC-------------------------HHHHHHHHhhc-CCeEEeCCcccc--
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDD-------------------------WSSWASLQSSV-DIQLVGDDLLVT-- 365 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D-------------------------~~~~~~L~~~~-~~pI~~dE~~~~-- 365 (472)
+.++.++. .+.+++.+..+||==+|..| ++..+++++.+ ++|++.= .+.+
T Consensus 29 ~~~~~~~~-~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m-~y~n~v 106 (262)
T 2ekc_A 29 DYETSLKA-FKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM-TYYNPI 106 (262)
T ss_dssp CHHHHHHH-HHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE-CCHHHH
T ss_pred ChHHHHHH-HHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE-ecCcHH
Confidence 45677766 45577888777775333322 24477888888 7888762 1211
Q ss_pred ---CHHHH-HHHHHcCCCC-EEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 366 ---NPKRI-AEAIQKKSCN-GLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 366 ---~~~~~-~~~i~~~a~d-~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
..+.+ +.+.+.+ +| ++.+|+. +.+..+..+.++++|+.++.-. ...+....+..++-. ...++..
T Consensus 107 ~~~g~~~f~~~~~~aG-~dgvii~dl~----~ee~~~~~~~~~~~gl~~i~l~-~p~t~~~rl~~ia~~-a~gfiy~ 176 (262)
T 2ekc_A 107 FRIGLEKFCRLSREKG-IDGFIVPDLP----PEEAEELKAVMKKYVLSFVPLG-APTSTRKRIKLICEA-ADEMTYF 176 (262)
T ss_dssp HHHCHHHHHHHHHHTT-CCEEECTTCC----HHHHHHHHHHHHHTTCEECCEE-CTTCCHHHHHHHHHH-CSSCEEE
T ss_pred HHhhHHHHHHHHHHcC-CCEEEECCCC----HHHHHHHHHHHHHcCCcEEEEe-CCCCCHHHHHHHHHh-CCCCEEE
Confidence 11333 3445555 56 5556554 4788889999999998742211 122333344444332 3456654
No 196
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=49.25 E-value=1e+02 Score=29.64 Aligned_cols=127 Identities=13% Similarity=0.084 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEE---ecccccccc-----------cC-cceeecCCCCCCCCCCccCHHHHHHHHHHH
Q 012041 261 REGLVLLTDAIEKAGYTGKINIGM---DVAASEFFT-----------KD-GNYDLNFKKQPNDGAHVLSAQSLGDLYKEF 325 (472)
Q Consensus 261 ~~~l~~v~~av~~~g~~g~i~l~v---D~~a~~~~~-----------~~-~~y~~~~~~~~~~~n~~~s~~eai~~~~~~ 325 (472)
.-++.++|+++.+.|+. ++.||- -. +|.||. .| ..|+.+.. +..||++....-
T Consensus 168 DGrV~aIR~aLd~~G~~-~v~ImsYsaKy-ASafYGPFRdAa~Sap~GDRktYQmdpa----------N~~EAlre~~~D 235 (323)
T 1l6s_A 168 DGQVQAIRQALDAAGFK-DTAIMSYSTKF-ASSFYGPFREAAGSALKGDRKSYQMNPM----------NRREAIRESLLD 235 (323)
T ss_dssp TTHHHHHHHHHHHTTCT-TCEEBCCCEEB-CCSCCHHHHHHHTCCCSSCCTTTSBCTT----------CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCC-CceeeehhHHH-hHHhhHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHhh
Confidence 45788999999999884 677662 22 233441 11 34665522 466777665433
Q ss_pred Hhh-CCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHH
Q 012041 326 VRD-FPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKS 404 (472)
Q Consensus 326 l~~-~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a 404 (472)
+++ .++.++-=-++. ++-.+++++++.+|+++-..+ .-..-++...++|+.|- =.-+++...-.+.
T Consensus 236 i~EGAD~vMVKPal~Y--LDIi~~vk~~~~~P~aaYqVS-GEYAMikaAa~~GwiD~----------~~~vlEsl~~~kR 302 (323)
T 1l6s_A 236 EAQGADCLMVKPAGAY--LDIVRELRERTELPIGAYQVS-GEYAMIKFAALAGAIDE----------EKVVLESLGSIKR 302 (323)
T ss_dssp HHTTCSBEEEESCTTC--HHHHHHHHTTCSSCEEEEECH-HHHHHHHHHHHTTSSCH----------HHHHHHHHHHHHH
T ss_pred HHhCCceEEEecCcch--hHHHHHHHHhcCCCeEEEEcC-cHHHHHHHHHHcCCccH----------HHHHHHHHHHHHh
Confidence 444 678888866664 677899999999999887753 22355666777777771 1223344444455
Q ss_pred cCCcEEec
Q 012041 405 AGWGVMVS 412 (472)
Q Consensus 405 ~g~~~~v~ 412 (472)
+|-.+++.
T Consensus 303 AGAd~IiT 310 (323)
T 1l6s_A 303 AGADLIFS 310 (323)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEee
Confidence 67776553
No 197
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=48.34 E-value=43 Score=33.23 Aligned_cols=40 Identities=10% Similarity=0.257 Sum_probs=29.8
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
+++...++++.+++||+.+. +.++++++.+++.+ +|.|.+
T Consensus 199 ~~~~i~~l~~~~~~pvi~gg--i~t~e~a~~~~~~G-ad~i~v 238 (393)
T 2qr6_A 199 EALNLKEFIGSLDVPVIAGG--VNDYTTALHMMRTG-AVGIIV 238 (393)
T ss_dssp ---CHHHHHHHCSSCEEEEC--CCSHHHHHHHHTTT-CSEEEE
T ss_pred cHHHHHHHHHhcCCCEEECC--cCCHHHHHHHHHcC-CCEEEE
Confidence 45557888999999998754 45789999888765 798888
No 198
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=48.28 E-value=1.2e+02 Score=27.28 Aligned_cols=43 Identities=12% Similarity=0.241 Sum_probs=34.5
Q ss_pred CcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 339 DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 339 ~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
...+++.++++++. ++||+++-- +++++++.++++.+ +|.+.+
T Consensus 172 ~~~~~~~i~~~~~~-~ipvia~GG-I~s~~~~~~~~~~G-ad~v~v 214 (234)
T 1yxy_A 172 AGPDVALIEALCKA-GIAVIAEGK-IHSPEEAKKINDLG-VAGIVV 214 (234)
T ss_dssp SSCCHHHHHHHHHT-TCCEEEESC-CCSHHHHHHHHTTC-CSEEEE
T ss_pred CCCCHHHHHHHHhC-CCCEEEECC-CCCHHHHHHHHHCC-CCEEEE
Confidence 34578889999888 888877663 66799999999887 788776
No 199
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=47.62 E-value=69 Score=31.38 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhhCCeeEEe-------CCCCcCC-HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 315 AQSLGDLYKEFVRDFPIVSIE-------DPFDQDD-WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 315 ~~eai~~~~~~l~~~~l~~iE-------dP~~~~D-~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
.++.+.. .+.+++.++.+++ .++...+ ..--+++++....||+..-. .+++...++|+.+.+|+|-+
T Consensus 240 ~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~~v~~~g~--~~~~~ae~~l~~G~aD~V~~ 314 (358)
T 4a3u_A 240 EQVFIPA-AKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLVLNQD--YTFETAQAALDSGVADAISF 314 (358)
T ss_dssp HHHHHHH-HHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCSCEEEESS--CCHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHHH-HHhhhccCccccccccccccCcccccccHHHHHHHHHhcCCcEEEeCC--CCHHHHHHHHHcCCceEeHh
Confidence 3444433 5556666655543 1222211 12235667777777766653 47899999999999998875
No 200
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=45.65 E-value=66 Score=31.64 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL 349 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L 349 (472)
+.+ ..+.+.+.+++.+|.|+=+|++.++++-+.++
T Consensus 76 ~~e-~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~ 110 (350)
T 3g8r_A 76 QPE-QMQKLVAEMKANGFKAICTPFDEESVDLIEAH 110 (350)
T ss_dssp CHH-HHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT
T ss_pred CHH-HHHHHHHHHHHcCCcEEeccCCHHHHHHHHHc
Confidence 344 34456788899999999999987766655543
No 201
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=45.41 E-value=26 Score=32.47 Aligned_cols=67 Identities=10% Similarity=-0.038 Sum_probs=36.9
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~ 409 (472)
-|++.+++|++.+++||++.= -+++++++.++++.+ +|.+.+=-.-.++--...++.++.+..|+.+
T Consensus 187 ~~~~~i~~l~~~~~ipvia~G-GI~~~ed~~~~~~~G-adgv~vgsal~~~~~~~~~~~~~l~~~g~~~ 253 (266)
T 2w6r_A 187 YDTEMIRFVRPLTTLPIIASG-GAGKMEHFLEAFLAG-ADAALAASVFHFREIDMRELKEYLKKHGVNV 253 (266)
T ss_dssp CCHHHHHHHGGGCCSCEEEES-CCCSHHHHHHHHHHT-CSEEEESTTTC--------------------
T ss_pred CCHHHHHHHHHHcCCCEEEeC-CCCCHHHHHHHHHcC-CHHHHccHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 378999999999999887765 367899999998755 7887776555555545667777777888765
No 202
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=44.44 E-value=2.6e+02 Score=28.09 Aligned_cols=126 Identities=8% Similarity=0.054 Sum_probs=79.5
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEeCCCCc---CCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIEDPFDQ---DDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iEdP~~~---~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
..++.++-+++ .+.|++.++..||=-++. .|++..+.+.+.. ...+++- ...+..++...++.+ ++.|.+-+
T Consensus 56 ~~~s~eeKl~I-a~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~~~~~~v~~~--~r~~~~di~~A~~aG-~~~V~i~~ 131 (423)
T 3ivs_A 56 AFFDTEKKIQI-AKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTH--IRCHMDDARVAVETG-VDGVDVVI 131 (423)
T ss_dssp CCCCHHHHHHH-HHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEEE--EESCHHHHHHHHHTT-CSEEEEEE
T ss_pred CCcCHHHHHHH-HHHHHHcCCCEEEEeecccCHHHHHHHHHHHhcCCCCEEEEe--eccChhhHHHHHHcC-CCEEEEEe
Confidence 35789998887 566899999999986654 4555666666532 2444432 134578898888875 56666532
Q ss_pred -------------CCcccHHHHHHHHHHHHHcCCcEEecCCCC-CChhhH---HHHHHHhhcCCCcccCCC
Q 012041 387 -------------NQIGTVTESIQAALDSKSAGWGVMVSHRSG-ETEDNF---IADLSVGLASGQIKTGAP 440 (472)
Q Consensus 387 -------------~k~GGitea~~ia~~A~a~g~~~~v~~~~~-Et~~s~---~a~lAva~~~~~i~~g~~ 440 (472)
++-.-+..+.+++++|+++|+.+.++.... .+.... .+..+...++..+.+.+.
T Consensus 132 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DT 202 (423)
T 3ivs_A 132 GTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADT 202 (423)
T ss_dssp EC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEET
T ss_pred eccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCc
Confidence 122235677789999999999986654211 122222 344456667877765554
No 203
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=44.37 E-value=1.5e+02 Score=28.79 Aligned_cols=128 Identities=9% Similarity=0.024 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEE---ecccccccc------------cC-cceeecCCCCCCCCCCccCHHHHHHHHHH
Q 012041 261 REGLVLLTDAIEKAGYTGKINIGM---DVAASEFFT------------KD-GNYDLNFKKQPNDGAHVLSAQSLGDLYKE 324 (472)
Q Consensus 261 ~~~l~~v~~av~~~g~~g~i~l~v---D~~a~~~~~------------~~-~~y~~~~~~~~~~~n~~~s~~eai~~~~~ 324 (472)
.-++.++|+++.+.|+..++.||- -. ++.||. .| ..|+++.. +..||++....
T Consensus 183 DGrV~aIR~aLd~~G~~~~v~ImsYsaKy-ASafYGPFRdAa~Sap~~GDRktYQmdpa----------N~~EAlre~~~ 251 (342)
T 1h7n_A 183 DGRIRDIKRGLINANLAHKTFVLSYAAKF-SGNLYGPFRDAACSAPSNGDRKCYQLPPA----------GRGLARRALER 251 (342)
T ss_dssp TTHHHHHHHHHHHTTCTTTCEEEEEEEEB-CSSCCHHHHHHHTCCCSSSCSTTTSBCTT----------CHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHCCCccCceEeechHHH-hHHhhHHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHh
Confidence 457889999999999832677663 22 233441 11 45666522 46677766443
Q ss_pred HHhh-CCeeEEeCCCCcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHH
Q 012041 325 FVRD-FPIVSIEDPFDQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDS 402 (472)
Q Consensus 325 ~l~~-~~l~~iEdP~~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A 402 (472)
-+++ .++.++-=-++. ++-.+++++++ .+|+++-..+ .-..-++...++|..|- =.-+++...-.
T Consensus 252 Di~EGAD~vMVKPal~Y--LDIi~~vk~~~p~~P~aaYqVS-GEYAMikaAa~~GwiD~----------~~~v~Esl~~~ 318 (342)
T 1h7n_A 252 DMSEGADGIIVKPSTFY--LDIMRDASEICKDLPICAYHVS-GEYAMLHAAAEKGVVDL----------KTIAFESHQGF 318 (342)
T ss_dssp HHHTTCSEEEEESSGGG--HHHHHHHHHHTTTSCEEEEECH-HHHHHHHHHHHTTSSCH----------HHHHHHHHHHH
T ss_pred hHHhCCCeEEEecCccH--HHHHHHHHHhccCCCeEEEEcC-cHHHHHHHHHHcCCccH----------HHHHHHHHHHH
Confidence 3444 678888755663 67789999999 7999887753 22355666777777771 12234444445
Q ss_pred HHcCCcEEec
Q 012041 403 KSAGWGVMVS 412 (472)
Q Consensus 403 ~a~g~~~~v~ 412 (472)
+.+|-.+++.
T Consensus 319 kRAGAd~IiT 328 (342)
T 1h7n_A 319 LRAGARLIIT 328 (342)
T ss_dssp HHTTCSEEEE
T ss_pred HhcCCCEEEe
Confidence 5677776553
No 204
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=44.21 E-value=1.7e+02 Score=28.25 Aligned_cols=110 Identities=15% Similarity=0.205 Sum_probs=58.0
Q ss_pred EecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhh-CCeeEE--e-----CCCCc-CCHHH----HHHHH
Q 012041 284 MDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRD-FPIVSI--E-----DPFDQ-DDWSS----WASLQ 350 (472)
Q Consensus 284 vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~-~~l~~i--E-----dP~~~-~D~~~----~~~L~ 350 (472)
+++..+.||+. |+| .+.+++++...+++++ .++.=| | +|+.. ++++- .+.|+
T Consensus 48 lNvTPDSFsdg-g~~--------------~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~ 112 (318)
T 2vp8_A 48 VNRTPDSFYDK-GAT--------------FSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLR 112 (318)
T ss_dssp EC-----------------------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHH
T ss_pred EeCCCCcccCC-Ccc--------------CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 56666667664 444 3567777776666654 333322 2 45553 23322 25556
Q ss_pred hhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 012041 351 SSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGE 417 (472)
Q Consensus 351 ~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~E 417 (472)
+.+ ++||.-|-. +++-++..++.+ +|+|| |++ |+ . --+++.++.++|.++++-|+.+.
T Consensus 113 ~~~~~vpISIDT~---~~~VaeaAl~aG-a~iIN-DVs--g~-~-d~~m~~vaa~~g~~vVlmh~~G~ 171 (318)
T 2vp8_A 113 GAYPDQLISVDTW---RAQVAKAACAAG-ADLIN-DTW--GG-V-DPAMPEVAAEFGAGLVCAHTGGA 171 (318)
T ss_dssp HHSTTCEEEEECS---CHHHHHHHHHHT-CCEEE-ETT--SS-S-STTHHHHHHHHTCEEEEECC---
T ss_pred hhCCCCeEEEeCC---CHHHHHHHHHhC-CCEEE-ECC--CC-C-chHHHHHHHHhCCCEEEECCCCC
Confidence 666 799999863 578888889885 56655 333 22 1 33788899999999999997543
No 205
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=44.19 E-value=1.6e+02 Score=28.06 Aligned_cols=95 Identities=12% Similarity=0.110 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHhh-CCeeEE--eC------CCCc-CCHHHH----HHHHhhcCCeEEeCCccccCHHHHHHHHHcCCC
Q 012041 314 SAQSLGDLYKEFVRD-FPIVSI--ED------PFDQ-DDWSSW----ASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSC 379 (472)
Q Consensus 314 s~~eai~~~~~~l~~-~~l~~i--Ed------P~~~-~D~~~~----~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~ 379 (472)
+.+++++...+++++ .++.=| |- |+.. ++++-. +.|++.+++||+-|-. +++-++..++.+ +
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~---~~~V~~aAl~aG-a 136 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTY---KAEVAKQAIEAG-A 136 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECS---CHHHHHHHHHHT-C
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCC---CHHHHHHHHHcC-C
Confidence 567788776665543 233322 22 2332 222222 4445556899999863 678888888885 6
Q ss_pred CEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 012041 380 NGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSG 416 (472)
Q Consensus 380 d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~ 416 (472)
++|| |++- ...--+++.++.++|.++++-|+.+
T Consensus 137 ~iIN-dvsg---~~~d~~m~~~aa~~g~~vVlmh~~G 169 (297)
T 1tx2_A 137 HIIN-DIWG---AKAEPKIAEVAAHYDVPIILMHNRD 169 (297)
T ss_dssp CEEE-ETTT---TSSCTHHHHHHHHHTCCEEEECCCS
T ss_pred CEEE-ECCC---CCCCHHHHHHHHHhCCcEEEEeCCC
Confidence 7774 3331 1112367888899999999999754
No 206
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=44.14 E-value=73 Score=31.65 Aligned_cols=90 Identities=7% Similarity=0.171 Sum_probs=52.0
Q ss_pred HHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEecc-----------CCccc--HHHHHHHHHHHHHcCCc
Q 012041 343 WSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV-----------NQIGT--VTESIQAALDSKSAGWG 408 (472)
Q Consensus 343 ~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~-----------~k~GG--itea~~ia~~A~a~g~~ 408 (472)
++-.+++++.+ ++||+... +.++++++.+.+.+ +|+|.+-. ...|+ ++-..++.+.+...+++
T Consensus 182 ~e~i~~ir~~~~~~pviv~~--v~~~~~a~~a~~~G-ad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ip 258 (404)
T 1eep_A 182 IELIKKIKTKYPNLDLIAGN--IVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNIC 258 (404)
T ss_dssp HHHHHHHHHHCTTCEEEEEE--ECSHHHHHHHHTTT-CSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCE
T ss_pred HHHHHHHHHHCCCCeEEEcC--CCcHHHHHHHHhcC-CCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCce
Confidence 45567778888 68988644 35678888877665 89988821 11232 33344455555567899
Q ss_pred EEecCCCCCChhhHHHHHHHhhcCCCcccC
Q 012041 409 VMVSHRSGETEDNFIADLSVGLASGQIKTG 438 (472)
Q Consensus 409 ~~v~~~~~Et~~s~~a~lAva~~~~~i~~g 438 (472)
++.... ..+......-+ ++++..+.+|
T Consensus 259 Via~GG-I~~~~d~~~al--a~GAd~V~iG 285 (404)
T 1eep_A 259 IIADGG-IRFSGDVVKAI--AAGADSVMIG 285 (404)
T ss_dssp EEEESC-CCSHHHHHHHH--HHTCSEEEEC
T ss_pred EEEECC-CCCHHHHHHHH--HcCCCHHhhC
Confidence 865442 23333333333 3456665554
No 207
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=43.33 E-value=1.3e+02 Score=28.19 Aligned_cols=114 Identities=19% Similarity=0.212 Sum_probs=71.2
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCCC----cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPFD----QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ 388 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~~----~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k 388 (472)
.++.+. ++..++.+..+|.=-.. ...++.++++++.+++||...+. .-+++++..+...| +|.|.+-..-
T Consensus 72 ~~p~~~----A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~kdf-iid~~qv~~A~~~G-AD~VlLi~a~ 145 (272)
T 3qja_A 72 ADPAKL----AQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDF-VVQPYQIHEARAHG-ADMLLLIVAA 145 (272)
T ss_dssp -CHHHH----HHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEEESC-CCSHHHHHHHHHTT-CSEEEEEGGG
T ss_pred CCHHHH----HHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEECcc-ccCHHHHHHHHHcC-CCEEEEeccc
Confidence 355544 34455666555543222 23456788889899999987774 56777788877765 6777763222
Q ss_pred cccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccC
Q 012041 389 IGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTG 438 (472)
Q Consensus 389 ~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g 438 (472)
. ...+..++.+.|+..|+.+++..... .. +..|..+++.++-.+
T Consensus 146 l-~~~~l~~l~~~a~~lGl~~lvev~t~---ee--~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 146 L-EQSVLVSMLDRTESLGMTALVEVHTE---QE--ADRALKAGAKVIGVN 189 (272)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEEEEESSH---HH--HHHHHHHTCSEEEEE
T ss_pred C-CHHHHHHHHHHHHHCCCcEEEEcCCH---HH--HHHHHHCCCCEEEEC
Confidence 2 25677888999999999987654221 11 334445567766544
No 208
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=43.11 E-value=1.3e+02 Score=24.26 Aligned_cols=78 Identities=19% Similarity=0.117 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCC-HHHHHHHHhhcC-CeE--EeCCccccCHHHHHHHHHcCCCCEEEeccCCc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDD-WSSWASLQSSVD-IQL--VGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQI 389 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D-~~~~~~L~~~~~-~pI--~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~ 389 (472)
+.+++++.+.+ ..+++..+.--++..| ++-.++|++... +|| +.+. .+.....+.++.+.++.+..|+...
T Consensus 46 ~~~~a~~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~---~~~~~~~~~~~~g~~~~~l~KP~~~ 120 (153)
T 3hv2_A 46 DATQALQLLAS--REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGD---PDLKLIAKAINEGEIYRYLSKPWDD 120 (153)
T ss_dssp SHHHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCC---CCHHHHHHHHHTTCCSEEECSSCCH
T ss_pred CHHHHHHHHHc--CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECC---CCHHHHHHHHhCCCcceEEeCCCCH
Confidence 56788776543 4577888887776544 566777877654 554 3333 2457777888888677788888765
Q ss_pred ccHHHHH
Q 012041 390 GTVTESI 396 (472)
Q Consensus 390 GGitea~ 396 (472)
.-+..++
T Consensus 121 ~~l~~~i 127 (153)
T 3hv2_A 121 QELLLAL 127 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554444
No 209
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=43.07 E-value=93 Score=30.36 Aligned_cols=128 Identities=11% Similarity=0.143 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEec--cccccccc-------------C-cceeecCCCCCCCCCCccCHHHHHHHHHH
Q 012041 261 REGLVLLTDAIEKAGYTGKINIGMDV--AASEFFTK-------------D-GNYDLNFKKQPNDGAHVLSAQSLGDLYKE 324 (472)
Q Consensus 261 ~~~l~~v~~av~~~g~~g~i~l~vD~--~a~~~~~~-------------~-~~y~~~~~~~~~~~n~~~s~~eai~~~~~ 324 (472)
.-++.++|+++++.|+. ++.||-=. -+|.||.. | ..|+.+.. +..||++....
T Consensus 187 DGrV~aIR~aLd~~G~~-~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpa----------N~~EAlrE~~l 255 (356)
T 3obk_A 187 DGRVSAIRESLDMEGCT-DTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPS----------NSREAEREAEA 255 (356)
T ss_dssp TTHHHHHHHHHHHTTCT-TSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTT----------CSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHCCCC-CcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCC----------CHHHHHHHHHh
Confidence 45788999999999874 67776321 12334410 1 34555421 34566655433
Q ss_pred HHhh-CCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHH
Q 012041 325 FVRD-FPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSK 403 (472)
Q Consensus 325 ~l~~-~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~ 403 (472)
-+++ .++.++-=-++ -++-.+++++.+.+|+++-..+ .-..-++...++|..|- =.-+++...-.+
T Consensus 256 Di~EGAD~vMVKPal~--YLDIi~~vk~~~~~PvaaYqVS-GEYAMikAAa~~GwiD~----------~~~v~Esl~~~k 322 (356)
T 3obk_A 256 DASEGADMLMVKPGLP--YLDVLAKIREKSKLPMVAYHVS-GEYAMLKAAAEKGYISE----------KDTVLEVLKSFR 322 (356)
T ss_dssp HHHTTCSEEEEESSGG--GHHHHHHHHHHCSSCEEEEECH-HHHHHHHHHHHHTSSCH----------HHHHHHHHHHHH
T ss_pred hHhcCCCEEEecCCCc--HHHHHHHHHhcCCCCEEEEEcc-HHHHHHHHHHHcCCccH----------HHHHHHHHHHHH
Confidence 3444 77888886666 4677889999999999887743 22355666777787771 122233334444
Q ss_pred HcCCcEEec
Q 012041 404 SAGWGVMVS 412 (472)
Q Consensus 404 a~g~~~~v~ 412 (472)
.+|-.+++.
T Consensus 323 RAGAd~IiT 331 (356)
T 3obk_A 323 RAGADAVAT 331 (356)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEeh
Confidence 567676553
No 210
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=42.52 E-value=1.4e+02 Score=28.67 Aligned_cols=106 Identities=8% Similarity=0.035 Sum_probs=61.7
Q ss_pred HhhCC--eeEEeC-C---CCcCCHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc-------
Q 012041 326 VRDFP--IVSIED-P---FDQDDWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT------- 391 (472)
Q Consensus 326 l~~~~--l~~iEd-P---~~~~D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG------- 391 (472)
+.+.+ ..|+|= . .+...++..++|++.++ +||+.+. +.++++++.+++.+ +|.|.+-- -||
T Consensus 114 ~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~--v~s~e~A~~a~~aG-ad~Ivvs~--hgG~~~~~~~ 188 (336)
T 1ypf_A 114 LAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGN--VGTPEAVRELENAG-ADATKVGI--GPGKVCITKI 188 (336)
T ss_dssp HHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHHT-CSEEEECS--SCSTTCHHHH
T ss_pred HHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECC--cCCHHHHHHHHHcC-CCEEEEec--CCCceeeccc
Confidence 34444 666651 1 12335677888999986 7777663 45789999988887 78887721 121
Q ss_pred -----HH--HHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccCC
Q 012041 392 -----VT--ESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGA 439 (472)
Q Consensus 392 -----it--ea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~ 439 (472)
.. ...-+.+++++.+++++.... ..+......-|+ +++..+.+|.
T Consensus 189 ~~~~g~~g~~~~~l~~v~~~~~ipVIa~GG-I~~g~Dv~kala--lGAdaV~iGr 240 (336)
T 1ypf_A 189 KTGFGTGGWQLAALRWCAKAASKPIIADGG-IRTNGDVAKSIR--FGATMVMIGS 240 (336)
T ss_dssp HHSCSSTTCHHHHHHHHHHTCSSCEEEESC-CCSTHHHHHHHH--TTCSEEEESG
T ss_pred ccCcCCchhHHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHH--cCCCEEEeCh
Confidence 00 244455666677899876443 233333333443 4555554443
No 211
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=42.42 E-value=23 Score=37.12 Aligned_cols=68 Identities=15% Similarity=0.034 Sum_probs=50.4
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~ 409 (472)
-|++.+++|++.+++||++.-- +.+++|+.++++...+|.+.+--.-.++-....++.++.+..|+.+
T Consensus 483 ~d~~li~~l~~~~~iPVIasGG-i~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~gi~~ 550 (555)
T 1jvn_A 483 YDLELIEHVKDAVKIPVIASSG-AGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKV 550 (555)
T ss_dssp CCHHHHHHHHHHCSSCEEECSC-CCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCccEEEECC-CCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 4899999999999999877543 5789999999985457777764443444445666667788888874
No 212
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=42.33 E-value=88 Score=29.55 Aligned_cols=109 Identities=7% Similarity=0.137 Sum_probs=63.2
Q ss_pred EecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhh-CCeeEE--e------CCCCcCCHHHHHHHH---h
Q 012041 284 MDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRD-FPIVSI--E------DPFDQDDWSSWASLQ---S 351 (472)
Q Consensus 284 vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~-~~l~~i--E------dP~~~~D~~~~~~L~---~ 351 (472)
+++..+.||+. |+| .+.+++++...+++++ .++.=| | +|+..+ +.++++. +
T Consensus 13 lNvTPDSFsDG-G~~--------------~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~e--eE~~Rv~pvi~ 75 (270)
T 4hb7_A 13 LNVTPDSFSDG-GKF--------------NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLE--EELNRVLPVVE 75 (270)
T ss_dssp EECC-------------------------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHH--HHHHHHHHHHH
T ss_pred EeCCCCCCCCC-CCC--------------CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchH--HHHHHHHHHHH
Confidence 57766667765 444 3678888886776654 333333 1 456543 3444432 1
Q ss_pred ---hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 012041 352 ---SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGE 417 (472)
Q Consensus 352 ---~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~E 417 (472)
+.++||.-|-. .++-++..++.+ +|+|| |++ ||..+ -+++.++..++.++++-|+.+.
T Consensus 76 ~l~~~~v~iSIDT~---~~~Va~~al~aG-a~iIN-DVs--~g~~d-~~m~~~va~~~~~~vlMH~~~~ 136 (270)
T 4hb7_A 76 AIVGFDVKISVDTF---RSEVAEACLKLG-VDMIN-DQW--AGLYD-HRMFQIVAKYDAEIILMHNGNG 136 (270)
T ss_dssp HHTTSSSEEEEECS---CHHHHHHHHHHT-CCEEE-ETT--TTSSC-THHHHHHHHTTCEEEEECCCSS
T ss_pred HhhcCCCeEEEECC---CHHHHHHHHHhc-cceec-ccc--ccccc-hhHHHHHHHcCCCeEEeccccC
Confidence 24699999963 567777888877 57776 232 33322 3677888899999999997653
No 213
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=40.92 E-value=81 Score=29.41 Aligned_cols=92 Identities=12% Similarity=-0.046 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCC-------------------------HHHHHHHHhh-cCCeEEe--CCc--c
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDD-------------------------WSSWASLQSS-VDIQLVG--DDL--L 363 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D-------------------------~~~~~~L~~~-~~~pI~~--dE~--~ 363 (472)
+.++..+. .+.+++.+..|||==++..| ++..+++++. +++||.. ... +
T Consensus 29 ~~~~~~~~-~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~ 107 (268)
T 1qop_A 29 GIEQSLKI-IDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVF 107 (268)
T ss_dssp CHHHHHHH-HHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHH
T ss_pred CHHHHHHH-HHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHH
Confidence 45666666 45577788777774333322 2457888888 7788754 221 1
Q ss_pred ccCH-HHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEE
Q 012041 364 VTNP-KRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVM 410 (472)
Q Consensus 364 ~~~~-~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~ 410 (472)
.+.. ..++.+.+.++--++.+|+.- .+..+..+.++++|+.++
T Consensus 108 ~~g~~~~~~~~~~aGadgii~~d~~~----e~~~~~~~~~~~~g~~~i 151 (268)
T 1qop_A 108 NNGIDAFYARCEQVGVDSVLVADVPV----EESAPFRQAALRHNIAPI 151 (268)
T ss_dssp TTCHHHHHHHHHHHTCCEEEETTCCG----GGCHHHHHHHHHTTCEEE
T ss_pred HhhHHHHHHHHHHcCCCEEEEcCCCH----HHHHHHHHHHHHcCCcEE
Confidence 1122 344445666543366666653 567788889999998753
No 214
>2izx_A CAMP-dependent protein kinase type II-alpha regulatory subunit; CAMP-binding, phosphorylation, nucleotide-binding, PKA, CAMP, anchor, kinase, acetylation; 1.3A {Homo sapiens} PDB: 2hwn_A
Probab=40.55 E-value=7.9 Score=25.40 Aligned_cols=16 Identities=6% Similarity=-0.066 Sum_probs=14.0
Q ss_pred CCcchhhhhhhhhcCC
Q 012041 27 YRPMRVQCSVASTASS 42 (472)
Q Consensus 27 ~~p~~~~~~~~~~~~~ 42 (472)
.+|.|++.+.++||++
T Consensus 21 ~qP~di~~f~a~yF~~ 36 (41)
T 2izx_A 21 QQPPDLVEFAVEYFTR 36 (41)
T ss_dssp HCCSCHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHH
Confidence 5789999999999964
No 215
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=40.53 E-value=1.6e+02 Score=28.54 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEE---ecccccccc------------cC-cceeecCCCCCCCCCCccCHHHHHHHHHH
Q 012041 261 REGLVLLTDAIEKAGYTGKINIGM---DVAASEFFT------------KD-GNYDLNFKKQPNDGAHVLSAQSLGDLYKE 324 (472)
Q Consensus 261 ~~~l~~v~~av~~~g~~g~i~l~v---D~~a~~~~~------------~~-~~y~~~~~~~~~~~n~~~s~~eai~~~~~ 324 (472)
.-++.++|+++.+.|+..++.||- -. ++.||. .| ..|+++.. +..||++....
T Consensus 172 DGrV~aIR~aLd~~G~~~~v~ImsYsaKy-ASafYGPFRdAa~Sap~~GDRktYQmdpa----------N~~EAlre~~~ 240 (330)
T 1pv8_A 172 DGRVEAIKEALMAHGLGNRVSVMSYSAKF-ASCFYGPFRDAAKSSPAFGDRRCYQLPPG----------ARGLALRAVDR 240 (330)
T ss_dssp CCHHHHHHHHHHHTTCTTTCEEBCCCEEC-CCGGGHHHHHCC-------------CCTT----------CHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCcCCceEeehhHHH-hHhhhhHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHh
Confidence 347889999999998853377763 22 233441 11 45766522 46677766544
Q ss_pred HHhh-CCeeEEeCCCCcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHH
Q 012041 325 FVRD-FPIVSIEDPFDQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDS 402 (472)
Q Consensus 325 ~l~~-~~l~~iEdP~~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A 402 (472)
-+++ .++.++-=-++. ++-.+++++++ .+|+++-..+ .-..-++...++|..|- =.-+++...-.
T Consensus 241 Di~EGAD~vMVKPal~Y--LDIi~~vk~~~p~~P~aaYqVS-GEYAMikaAa~~GwiD~----------~~~v~Esl~~~ 307 (330)
T 1pv8_A 241 DVREGADMLMVKPGMPY--LDIVREVKDKHPDLPLAVYHVS-GEFAMLWHGAQAGAFDL----------KAAVLEAMTAF 307 (330)
T ss_dssp HHHTTCSBEEEESCGGG--HHHHHHHHHHSTTSCEEEEECH-HHHHHHHHHHHTTSSCH----------HHHHHHHHHHH
T ss_pred hHHhCCceEEEecCccH--HHHHHHHHHhcCCCCeEEEEcC-cHHHHHHHHHHcCCccH----------HHHHHHHHHHH
Confidence 3444 678888755663 67789999999 7999887753 22355666777777771 12233333444
Q ss_pred HHcCCcEEec
Q 012041 403 KSAGWGVMVS 412 (472)
Q Consensus 403 ~a~g~~~~v~ 412 (472)
+.+|-.+++.
T Consensus 308 kRAGAd~IiT 317 (330)
T 1pv8_A 308 RRAGADIIIT 317 (330)
T ss_dssp HHHTCSEEEE
T ss_pred HhcCCCEEee
Confidence 4566666543
No 216
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=40.46 E-value=1.1e+02 Score=27.71 Aligned_cols=112 Identities=7% Similarity=-0.010 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhhCCe----eEEeCC--CCcCCHHHHHHHH---hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 317 SLGDLYKEFVRDFPI----VSIEDP--FDQDDWSSWASLQ---SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 317 eai~~~~~~l~~~~l----~~iEdP--~~~~D~~~~~~L~---~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
+.++.+.++++++++ ..||=+ ...++.+.....- +..|+.|+.|+. -+....+..+. .-.+|+|.||-.
T Consensus 110 ~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDdf-G~g~s~l~~L~-~l~~d~iKiD~~ 187 (250)
T 4f3h_A 110 QMIDTIREQLAVYGVPGERLWLQTPESKVFTHLRNAQQFLASVSAMGCKVGLEQF-GSGLDSFQLLA-HFQPAFLKLDRS 187 (250)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEHHHHHHSHHHHHHHHHHHHTTTCEEEEEEE-TSSTHHHHHHT-TSCCSEEEECHH
T ss_pred HHHHHHHHHHHHcCCCcceEEEEEechhhhcCHHHHHHHHHHHHHCCCEEEEeCC-CCCchHHHHHh-hCCCCEEEECHH
Confidence 344455666666652 233322 2223433333322 244799999994 56656665554 445899999943
Q ss_pred Ccc-------cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCC
Q 012041 388 QIG-------TVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQ 434 (472)
Q Consensus 388 k~G-------Gitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~ 434 (472)
-+. .-.-...++.+|+..|+.+++-+ .|+... .+....+++.+
T Consensus 188 ~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeG--VEt~~~--~~~l~~~G~~~ 237 (250)
T 4f3h_A 188 ITGDIASARESQEKIREITSRAQPTGILTVAEF--VADAQS--MSSFFTAGVDY 237 (250)
T ss_dssp HHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECC--CCCHHH--HHHHHHHTCSE
T ss_pred HHHhHhcChhhHHHHHHHHHHHHHcCCEEEEec--cCCHHH--HHHHHHcCCCE
Confidence 322 23345667889999999986544 566433 23334444443
No 217
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=39.64 E-value=32 Score=31.48 Aligned_cols=67 Identities=12% Similarity=-0.044 Sum_probs=45.9
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~ 409 (472)
-|++.++++++.+++||++.=- +++++++.++.+.+ +|.+.+=-.-.++--...++.+.++..|+++
T Consensus 183 ~~~~~i~~l~~~~~ipvia~GG-I~~~~d~~~~~~~G-adgv~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 183 YDLRLTRMVAEAVGVPVIASGG-AGRMEHFLEAFQAG-AEAALAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp CCHHHHHHHHHHCSSCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred CCHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHCC-CHHHHHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 3799999999999998876542 57789999998754 7777654332333223444555667778764
No 218
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=39.64 E-value=78 Score=30.95 Aligned_cols=55 Identities=11% Similarity=0.030 Sum_probs=39.7
Q ss_pred HHHHHHHHhhc--CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC-CcccHHHHHHHH
Q 012041 343 WSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN-QIGTVTESIQAA 399 (472)
Q Consensus 343 ~~~~~~L~~~~--~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~-k~GGitea~~ia 399 (472)
++..+++++.+ .+||++.-- +.+.+|+.+++..+ +|.|++--. -.+|..-..++.
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GG-I~s~~da~~~l~aG-Ad~V~igra~~~~gP~~~~~i~ 319 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGG-VXTGRDAFEHILCG-ASMVQIGTALHQEGPQIFKRIT 319 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESS-CCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEECC-CCChHHHHHHHHhC-CCEEEEChHHHhcChHHHHHHH
Confidence 67778889998 599987764 67899999999887 799998554 333443333333
No 219
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=39.03 E-value=2.3e+02 Score=27.86 Aligned_cols=92 Identities=5% Similarity=-0.068 Sum_probs=55.2
Q ss_pred HHHHHHHHhhcCCeEEeCCc-cccCHHHHHHHHHcCCCCEEEeccCCcccH-----------------------------
Q 012041 343 WSSWASLQSSVDIQLVGDDL-LVTNPKRIAEAIQKKSCNGLLLKVNQIGTV----------------------------- 392 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~-~~~~~~~~~~~i~~~a~d~i~ik~~k~GGi----------------------------- 392 (472)
++..+++++.+++||+..+. ...++++++.+.+.+ +|+|.+.-. ||-
T Consensus 176 ~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aG-ad~I~V~g~--GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~ 252 (368)
T 3vkj_A 176 LEKLRDISKELSVPIIVKESGNGISMETAKLLYSYG-IKNFDTSGQ--GGTNWIAIEMIRDIRRGNWKAESAKNFLDWGV 252 (368)
T ss_dssp HHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTT-CCEEECCCB--TSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCC-CCEEEEeCC--CCCcccchhhhhcccccccchhhccccccccc
Confidence 56778888889999998773 013678888887765 888877432 441
Q ss_pred HHHHHHHHHHHHcC-CcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 393 TESIQAALDSKSAG-WGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 393 tea~~ia~~A~a~g-~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
..+..+...+++.+ ++++.... ..+.....-. +++++..+.+|.+
T Consensus 253 pt~~~l~~v~~~~~~ipvia~GG-I~~~~d~~ka--l~lGA~~v~ig~~ 298 (368)
T 3vkj_A 253 PTAASIMEVRYSVPDSFLVGSGG-IRSGLDAAKA--IALGADIAGMALP 298 (368)
T ss_dssp BHHHHHHHHHHHSTTCEEEEESS-CCSHHHHHHH--HHHTCSEEEECHH
T ss_pred cHHHHHHHHHHHcCCCcEEEECC-CCCHHHHHHH--HHcCCCEEEEcHH
Confidence 11123344555553 77765442 3444343333 4456777777654
No 220
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=38.51 E-value=1.3e+02 Score=29.53 Aligned_cols=94 Identities=6% Similarity=0.088 Sum_probs=59.1
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC----CcccHHHHHHHHHHHHHc--CCcEEecCC
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN----QIGTVTESIQAALDSKSA--GWGVMVSHR 414 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~----k~GGitea~~ia~~A~a~--g~~~~v~~~ 414 (472)
-.++..++|++.+++||+.-+. .++++++.+.+.+ +|+|.+.-. .-+|...+.-+..+.++. +++++..+
T Consensus 216 ~~~~~i~~lr~~~~~PvivK~v--~~~e~a~~a~~~G-ad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~G- 291 (368)
T 2nli_A 216 ISPRDIEEIAGHSGLPVFVKGI--QHPEDADMAIKRG-ASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDS- 291 (368)
T ss_dssp CCHHHHHHHHHHSSSCEEEEEE--CSHHHHHHHHHTT-CSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECS-
T ss_pred hhHHHHHHHHHHcCCCEEEEcC--CCHHHHHHHHHcC-CCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEEC-
Confidence 4678899999999999988763 5688888887776 788887321 112344444444555544 58876544
Q ss_pred CCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 415 SGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 415 ~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
...++....- ++++++..+.+|-+
T Consensus 292 GI~~g~D~~k--alalGAd~V~iGr~ 315 (368)
T 2nli_A 292 GVRRGEHVAK--ALASGADVVALGRP 315 (368)
T ss_dssp SCCSHHHHHH--HHHTTCSEEEECHH
T ss_pred CCCCHHHHHH--HHHcCCCEEEECHH
Confidence 2334333333 34466777777654
No 221
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=38.45 E-value=1.8e+02 Score=27.69 Aligned_cols=123 Identities=9% Similarity=0.029 Sum_probs=74.9
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCC--eeEEeCC
Q 012041 260 NREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFP--IVSIEDP 337 (472)
Q Consensus 260 ~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~--l~~iEdP 337 (472)
.+|+.+.++.+++.++ |++.+.+-+. . +..+++++ .+..++.+ -..+--|
T Consensus 64 ~eEr~~v~~~~v~~~~--grvpViaGvg------------------------~-~t~~ai~l-a~~A~~~Gadavlv~~P 115 (316)
T 3e96_A 64 LEEAKEEVRRTVEYVH--GRALVVAGIG------------------------Y-ATSTAIEL-GNAAKAAGADAVMIHMP 115 (316)
T ss_dssp HHHHHHHHHHHHHHHT--TSSEEEEEEC------------------------S-SHHHHHHH-HHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHhC--CCCcEEEEeC------------------------c-CHHHHHHH-HHHHHhcCCCEEEEcCC
Confidence 5788888888887763 5677776661 1 45678876 44456644 3344456
Q ss_pred CCc----CC-HHHHHHHHhhcCCeEEeCCc-cccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCc-EE
Q 012041 338 FDQ----DD-WSSWASLQSSVDIQLVGDDL-LVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWG-VM 410 (472)
Q Consensus 338 ~~~----~D-~~~~~~L~~~~~~pI~~dE~-~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~-~~ 410 (472)
... +. ++-++.+.+.+++||+.-+. ..-+++-+.++. ..-+++-+|-+ +|-+....++.+.+...+.. ++
T Consensus 116 ~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La--~~pnIvgiKds-sgd~~~~~~~~~~~~~~~f~~v~ 192 (316)
T 3e96_A 116 IHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLA--PLQNLVGVKYA-INDLPRFAKVVRSIPEEHQIAWI 192 (316)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHT--TCTTEEEEEEC-CCCHHHHHHHHTTSCGGGCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH--cCCCEEEEEeC-CCCHHHHHHHHHhcCCCCceEEE
Confidence 531 22 24567888888999987652 122467777775 45679999986 46676655555433222344 54
Q ss_pred ecC
Q 012041 411 VSH 413 (472)
Q Consensus 411 v~~ 413 (472)
.|.
T Consensus 193 ~G~ 195 (316)
T 3e96_A 193 CGT 195 (316)
T ss_dssp ETT
T ss_pred eCC
Confidence 443
No 222
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=38.31 E-value=1.4e+02 Score=28.45 Aligned_cols=64 Identities=13% Similarity=0.119 Sum_probs=48.3
Q ss_pred HHHHHhhC--CeeEEeCCCCcCCHHHHHHHHhhc--CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 322 YKEFVRDF--PIVSIEDPFDQDDWSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 322 ~~~~l~~~--~l~~iEdP~~~~D~~~~~~L~~~~--~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
|...-+.+ .+.++|---.+.+.+-.+++++.+ .+||+.+-- +.++++++++++.+ +|.|.+--.
T Consensus 191 Ya~~gad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~iPV~vGGG-Irs~Eda~~ll~aG-AD~VVVGSA 258 (286)
T 3vk5_A 191 YLHVARAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPDQVLFVSGN-VRSGRQVTEYLDSG-ADYVGFAGA 258 (286)
T ss_dssp HHHHHHHTTCSEEEEECSSSCCCHHHHHHHHHHSCTTCEEEEESS-CCSHHHHHHHHHTT-CSEEEESGG
T ss_pred HHHHHHHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCCCCEEEEeC-CCCHHHHHHHHHcC-CCEEEECch
Confidence 35545554 588888655667889999999999 788865543 67899999999887 888887554
No 223
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=37.91 E-value=2.2e+02 Score=26.66 Aligned_cols=118 Identities=10% Similarity=0.019 Sum_probs=68.5
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCC-------------------------HHHHHHHHhh-cCCeEEe--CCc--c
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDD-------------------------WSSWASLQSS-VDIQLVG--DDL--L 363 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D-------------------------~~~~~~L~~~-~~~pI~~--dE~--~ 363 (472)
+.+..++.+. .+++.+..+||=-+|..| ++..+++|++ ..+||+. .-. +
T Consensus 32 ~~~~~~~~~~-~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~ 110 (271)
T 3nav_A 32 NPEQSLAIMQ-TLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVY 110 (271)
T ss_dssp CHHHHHHHHH-HHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHH
T ss_pred CHHHHHHHHH-HHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 4667777754 466677777774333311 3466777777 6788754 221 1
Q ss_pred ccCHHHHHH-HHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCcccC
Q 012041 364 VTNPKRIAE-AIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTG 438 (472)
Q Consensus 364 ~~~~~~~~~-~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g 438 (472)
....+.|.+ +.+.|.--++.+|+.- .+..+....|+++|+..+.-. ...+....+..++- ....|+..-
T Consensus 111 ~~g~~~f~~~~~~aGvdGvIipDlp~----ee~~~~~~~~~~~gl~~I~lv-ap~t~~eri~~i~~-~~~gfiY~v 180 (271)
T 3nav_A 111 ARGIDDFYQRCQKAGVDSVLIADVPT----NESQPFVAAAEKFGIQPIFIA-PPTASDETLRAVAQ-LGKGYTYLL 180 (271)
T ss_dssp HTCHHHHHHHHHHHTCCEEEETTSCG----GGCHHHHHHHHHTTCEEEEEE-CTTCCHHHHHHHHH-HCCSCEEEC
T ss_pred HHhHHHHHHHHHHCCCCEEEECCCCH----HHHHHHHHHHHHcCCeEEEEE-CCCCCHHHHHHHHH-HCCCeEEEE
Confidence 223455544 4455544447788764 578889999999999853222 22333444444433 456777753
No 224
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=37.77 E-value=3.2e+02 Score=27.16 Aligned_cols=75 Identities=16% Similarity=0.148 Sum_probs=47.7
Q ss_pred CCHHHHHHHHh---hcCCeEEeCCcc--ccCHHHHHHHHHcCCCCEEEeccCCcccHHH-------HHHHHHHHHHcCCc
Q 012041 341 DDWSSWASLQS---SVDIQLVGDDLL--VTNPKRIAEAIQKKSCNGLLLKVNQIGTVTE-------SIQAALDSKSAGWG 408 (472)
Q Consensus 341 ~D~~~~~~L~~---~~~~pI~~dE~~--~~~~~~~~~~i~~~a~d~i~ik~~k~GGite-------a~~ia~~A~a~g~~ 408 (472)
.|.+...+.-+ ..|+.|+.|+.- .++...+..+ .+|+|-||-.-+-.+.. ...++.+|+..|+.
T Consensus 154 ~~~~~~~~~l~~Lr~~G~~ialDDFG~g~ssl~~L~~l----~~d~iKID~s~v~~~~~~~~~~~il~~ii~la~~lg~~ 229 (431)
T 2bas_A 154 GDIEQLYHMLAYYRTYGIKIAVDNIGKESSNLDRIALL----SPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAA 229 (431)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEEEETTTBCCHHHHHHH----CCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCcHHHHHHHhC----CCCEEEECHHHHhhhhcCHhHHHHHHHHHHHHHHcCCE
Confidence 45444443332 457999999841 2334444443 68999999887776654 66788899999999
Q ss_pred EEecCCCCCChhh
Q 012041 409 VMVSHRSGETEDN 421 (472)
Q Consensus 409 ~~v~~~~~Et~~s 421 (472)
+++-+ .|+...
T Consensus 230 vvAEG--VEt~~q 240 (431)
T 2bas_A 230 LLYED--IEANFQ 240 (431)
T ss_dssp EEEEC--CCSHHH
T ss_pred EEEEe--CCCHHH
Confidence 87655 566543
No 225
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=37.04 E-value=2.4e+02 Score=25.55 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=34.1
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
.|++..+++++. ++|+++.-- +++++++.++++.| +|.+.+
T Consensus 169 ~~~~li~~l~~~-~ipvIA~GG-I~t~~d~~~~~~~G-adgV~V 209 (229)
T 3q58_A 169 PDLAMVTQLSHA-GCRVIAEGR-YNTPALAANAIEHG-AWAVTV 209 (229)
T ss_dssp CCHHHHHHHHTT-TCCEEEESS-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCHHHHHHHHHc-CCCEEEECC-CCCHHHHHHHHHcC-CCEEEE
Confidence 488999999987 898877763 67899999999986 788877
No 226
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=36.44 E-value=1.7e+02 Score=28.69 Aligned_cols=40 Identities=8% Similarity=-0.046 Sum_probs=31.4
Q ss_pred HHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEec
Q 012041 343 WSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLK 385 (472)
Q Consensus 343 ~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik 385 (472)
++..+++++.. ++||+++. +.++++++.+++.+ +|+|.+-
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~--V~T~e~A~~a~~aG-aD~I~Vg 169 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGN--VATYAGADYLASCG-ADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--ECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEcC--cCCHHHHHHHHHcC-CCEEEEc
Confidence 46678888887 59999875 45789999888876 7998874
No 227
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=36.11 E-value=77 Score=32.41 Aligned_cols=91 Identities=12% Similarity=0.223 Sum_probs=58.8
Q ss_pred HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC-----------C--cccHHHHHHHHHHHHHcCCcE
Q 012041 343 WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN-----------Q--IGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~-----------k--~GGitea~~ia~~A~a~g~~~ 409 (472)
++..++|++..++|+++.+. .++++.+.++ .+|.+.+-.+ . ...++....+.+++++.++++
T Consensus 257 L~~I~~l~~~~~vpvi~k~v--~~~~~a~~l~---G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpV 331 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNI--ANPKAVDDLT---FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYV 331 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEE--CCHHHHTTCT---TSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEE
T ss_pred hhHHHHHHHHhCCccccCCc--CCHHHHHHhh---CCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcE
Confidence 34557788888999999985 3677777765 5788877221 0 123556666777788889998
Q ss_pred EecCCCCCChhhHHHHHHHhhcCCCcccCCCC
Q 012041 410 MVSHRSGETEDNFIADLSVGLASGQIKTGAPC 441 (472)
Q Consensus 410 ~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~~ 441 (472)
+..+.. -+....+. |+++++..+..|.+.
T Consensus 332 ia~GGi-~~~~di~k--alalGA~~v~~g~~~ 360 (486)
T 2cu0_A 332 IADGGI-RYSGDIVK--AIAAGADAVMLGNLL 360 (486)
T ss_dssp EEESCC-CSHHHHHH--HHHTTCSEEEESTTT
T ss_pred EecCCC-CCHHHHHH--HHHcCCCceeeChhh
Confidence 665422 22222223 445778888888773
No 228
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=35.18 E-value=2.6e+02 Score=25.44 Aligned_cols=92 Identities=11% Similarity=-0.052 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCc----
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQI---- 389 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~---- 389 (472)
+.+++++.-.++.+-++=.+|-=|...+-+...++|.+. ++++-.-= +.++.+..-..+.| ++++.|-++|.
T Consensus 65 d~e~mi~eA~~L~~~~~nv~IKIP~T~eGl~A~~~L~~~-GI~vn~Tl--ifS~~QA~~Aa~AG-a~yISPfvgRi~d~g 140 (223)
T 3s1x_A 65 KYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTLSSE-HINTNCTL--VFNPIQALLAAKAG-VTYVSPFVGRLDDIG 140 (223)
T ss_dssp SHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHT-TCCEEEEE--ECSHHHHHHHHHTT-CSEEEEBSHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHC-CCcEEEEE--eCCHHHHHHHHHcC-CeEEEeecchHhhcC
Confidence 455555553443333555678888887766777777654 67664442 44677777777777 79999988764
Q ss_pred -ccHHHHHHHHHHHHHcCCcE
Q 012041 390 -GTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 390 -GGitea~~ia~~A~a~g~~~ 409 (472)
-|+.-..++.++.+.+|.++
T Consensus 141 ~dG~~~v~~i~~~~~~~~~~T 161 (223)
T 3s1x_A 141 EDGMQIIDMIRTIFNNYIIKT 161 (223)
T ss_dssp SCTHHHHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHHHHHHcCCCC
Confidence 47889999999999988554
No 229
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=34.63 E-value=2.6e+02 Score=25.30 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=34.4
Q ss_pred cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 340 QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 340 ~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
.-|++.++++++. ++|+++.-- +++++++.++++.| +|.+.+
T Consensus 168 ~~~~~~i~~l~~~-~ipvIA~GG-I~t~~d~~~~~~~G-adgV~V 209 (232)
T 3igs_A 168 EPDLPLVKALHDA-GCRVIAEGR-YNSPALAAEAIRYG-AWAVTV 209 (232)
T ss_dssp SCCHHHHHHHHHT-TCCEEEESC-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCCHHHHHHHHhc-CCcEEEECC-CCCHHHHHHHHHcC-CCEEEE
Confidence 3488999999988 898877653 66799999999986 788877
No 230
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=34.36 E-value=1.1e+02 Score=27.52 Aligned_cols=108 Identities=10% Similarity=0.095 Sum_probs=61.8
Q ss_pred HHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEe----C----Ccccc-CHHHHHHHHHcCCCCEEEeccC
Q 012041 317 SLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVG----D----DLLVT-NPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 317 eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~----d----E~~~~-~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
+..++ .+.+.+.+..+|+= +..+..+.+++.+++|+++ | ...+. ..+.+..+++.+ +|.+.+...
T Consensus 37 ~~~~~-a~~~~~~G~~~i~~----~~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~G-ad~V~l~~~ 110 (234)
T 1yxy_A 37 IMPLM-AKAAQEAGAVGIRA----NSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALN-IAVIAMDCT 110 (234)
T ss_dssp SHHHH-HHHHHHHTCSEEEE----ESHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTT-CSEEEEECC
T ss_pred hHHHH-HHHHHHCCCcEeec----CCHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcC-CCEEEEccc
Confidence 33434 44466677777762 2467788889888999863 1 22222 346666666655 789988776
Q ss_pred CcccH--HHHHHHHHHHHHc--CCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 388 QIGTV--TESIQAALDSKSA--GWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 388 k~GGi--tea~~ia~~A~a~--g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
..+.. ....++++.+++. ++.++++.. +... +..+...++.++
T Consensus 111 ~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~---t~~e--a~~a~~~Gad~i 157 (234)
T 1yxy_A 111 KRDRHDGLDIASFIRQVKEKYPNQLLMADIS---TFDE--GLVAHQAGIDFV 157 (234)
T ss_dssp SSCCTTCCCHHHHHHHHHHHCTTCEEEEECS---SHHH--HHHHHHTTCSEE
T ss_pred ccCCCCCccHHHHHHHHHHhCCCCeEEEeCC---CHHH--HHHHHHcCCCEE
Confidence 54321 1234555656555 677655432 1111 444555667777
No 231
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=33.95 E-value=1.8e+02 Score=28.47 Aligned_cols=93 Identities=14% Similarity=0.189 Sum_probs=57.4
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC----CcccHHHHHHHHHHHHHc--CCcEEecCCC
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN----QIGTVTESIQAALDSKSA--GWGVMVSHRS 415 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~----k~GGitea~~ia~~A~a~--g~~~~v~~~~ 415 (472)
+++..+++++.+++||+..+. .++++++.+.+.+ +|+|.+... .-|+...+.-+..+.+.. +++++..+ .
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~--~~~e~a~~a~~~G-ad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~G-G 288 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGV--ITAEDARLAVQHG-AAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDG-G 288 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECC--CSHHHHHHHHHTT-CSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEES-S
T ss_pred hHHHHHHHHHHhCCCEEEEec--CCHHHHHHHHHcC-CCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEEC-C
Confidence 677799999999999988764 4688988888776 888887321 112223333344555555 68876544 2
Q ss_pred CCChhhHHHHHHHhhcCCCcccCCC
Q 012041 416 GETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 416 ~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
..+.....-- +++++..+.+|.+
T Consensus 289 I~~~~D~~k~--l~~GAdaV~iGr~ 311 (370)
T 1gox_A 289 VRRGTDVFKA--LALGAAGVFIGRP 311 (370)
T ss_dssp CCSHHHHHHH--HHHTCSEEEECHH
T ss_pred CCCHHHHHHH--HHcCCCEEeecHH
Confidence 3343333333 3356777766654
No 232
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=33.83 E-value=37 Score=34.54 Aligned_cols=43 Identities=9% Similarity=-0.018 Sum_probs=35.1
Q ss_pred HHHHHHHHhhc--CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 343 WSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 343 ~~~~~~L~~~~--~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
++..+++++.+ .+||++.-- +.+.+|+.+.+..+ +|.|++--.
T Consensus 360 l~~i~~v~~~v~~~iPVIg~GG-I~s~~DA~e~l~aG-Ad~Vqigra 404 (443)
T 1tv5_A 360 TKFICEMYNYTNKQIPIIASGG-IFSGLDALEKIEAG-ASVCQLYSC 404 (443)
T ss_dssp HHHHHHHHHHTTTCSCEEEESS-CCSHHHHHHHHHTT-EEEEEESHH
T ss_pred HHHHHHHHHHcCCCCcEEEECC-CCCHHHHHHHHHcC-CCEEEEcHH
Confidence 46678888888 699987764 67899999999988 899998544
No 233
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=33.23 E-value=1.4e+02 Score=26.83 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=33.1
Q ss_pred HHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 344 SSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 344 ~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
+..+++++.+++|+..+-- +.+++++..+++.+ +|.+.+..
T Consensus 65 ~~i~~i~~~~~ipv~v~gg-I~~~~~~~~~l~~G-ad~V~lg~ 105 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGG-IRDDDTLAAALATG-CTRVNLGT 105 (244)
T ss_dssp HHHHHHHHHCSSEEEEESS-CCSHHHHHHHHHTT-CSEEEECH
T ss_pred HHHHHHHHhcCCcEEEECC-cCCHHHHHHHHHcC-CCEEEECc
Confidence 7788999999999877653 57889999999987 78887643
No 234
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=33.14 E-value=55 Score=29.54 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=40.2
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcC
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAG 406 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g 406 (472)
+++..+++++.+++|+++.-- +.+++++..+++.+ +|.+.+-..- +.+-..+.++++.+|
T Consensus 65 ~~~~i~~i~~~~~ipvi~~g~-i~~~~~~~~~~~~G-ad~V~i~~~~---~~~~~~~~~~~~~~g 124 (253)
T 1h5y_A 65 FIDSVKRVAEAVSIPVLVGGG-VRSLEDATTLFRAG-ADKVSVNTAA---VRNPQLVALLAREFG 124 (253)
T ss_dssp HHHHHHHHHHHCSSCEEEESS-CCSHHHHHHHHHHT-CSEEEESHHH---HHCTHHHHHHHHHHC
T ss_pred cHHHHHHHHHhcCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEChHH---hhCcHHHHHHHHHcC
Confidence 456678888888899877663 67889999999887 8888864321 222223445555555
No 235
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=32.81 E-value=71 Score=30.03 Aligned_cols=60 Identities=12% Similarity=0.202 Sum_probs=45.6
Q ss_pred HHHHhhCCeeEEeCCCCc--------CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEec
Q 012041 323 KEFVRDFPIVSIEDPFDQ--------DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLK 385 (472)
Q Consensus 323 ~~~l~~~~l~~iEdP~~~--------~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik 385 (472)
++.+++.+...++ |+.. .|++-.+.+++..++||+.+=- +.+++|+..+++.| +|.+.+-
T Consensus 149 akrl~~~G~~aVm-Plg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGG-I~TPsDAa~AmeLG-AdgVlVg 216 (265)
T 1wv2_A 149 ARQLAEIGCIAVM-PLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAG-VGTASDAAIAMELG-CEAVLMN 216 (265)
T ss_dssp HHHHHHSCCSEEE-ECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESC-CCSHHHHHHHHHHT-CSEEEES
T ss_pred HHHHHHhCCCEEE-eCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCC-CCCHHHHHHHHHcC-CCEEEEC
Confidence 4557788877774 4332 4889999999988899887653 67899999999996 6766653
No 236
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=32.74 E-value=41 Score=30.76 Aligned_cols=67 Identities=10% Similarity=-0.036 Sum_probs=45.4
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~ 409 (472)
-|++.++++++.+++||+++=- +++++++.++.+.+ +|.+.+=-.-.++-....++.+..+..|+++
T Consensus 182 ~~~~~~~~l~~~~~ipvia~GG-I~~~~d~~~~~~~G-adgv~vGsal~~~~~~~~~~~~~l~~~g~~~ 248 (253)
T 1thf_D 182 YDTEMIRFVRPLTTLPIIASGG-AGKMEHFLEAFLAG-ADAALAASVFHFREIDVRELKEYLKKHGVNV 248 (253)
T ss_dssp CCHHHHHHHGGGCCSCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTCSCHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhcCCCEEEECC-CCCHHHHHHHHHcC-ChHHHHHHHHHcCCCCHHHHHHHHHHcCCcc
Confidence 3799999999988999877653 67789999998754 6777654322222112344555567778764
No 237
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=32.67 E-value=2.3e+02 Score=24.04 Aligned_cols=87 Identities=11% Similarity=0.038 Sum_probs=56.9
Q ss_pred CHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcC---CcEEecCCCCCChhhHHHHHHHhhcCCCcccCCCCC
Q 012041 366 NPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAG---WGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCR 442 (472)
Q Consensus 366 ~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g---~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~~~ 442 (472)
.++++.+.+....+|+|-+.......+..+.++++..++.| +++++|+... + .-....-..++..+...+-..
T Consensus 57 p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~-~---~~~~~l~~~G~d~v~~~~~~~ 132 (161)
T 2yxb_A 57 TPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIP-I---PDLEPLRSLGIREIFLPGTSL 132 (161)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCC-H---HHHHHHHHTTCCEEECTTCCH
T ss_pred CHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCc-h---hcHHHHHHCCCcEEECCCCCH
Confidence 46888888888889999999888888999999999888876 6788887432 1 111223345565433222222
Q ss_pred chhHHHhhHHHHHH
Q 012041 443 SERLAKYNQLLRIE 456 (472)
Q Consensus 443 ~e~~~k~n~ll~i~ 456 (472)
.+-+....++++-.
T Consensus 133 ~~~~~~~~~~~~~~ 146 (161)
T 2yxb_A 133 GEIIEKVRKLAEEK 146 (161)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 34556666666543
No 238
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=32.47 E-value=1.2e+02 Score=29.79 Aligned_cols=92 Identities=13% Similarity=0.223 Sum_probs=57.4
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc------HHHHHHHHHHHHHcCCcEEecCC
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT------VTESIQAALDSKSAGWGVMVSHR 414 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG------itea~~ia~~A~a~g~~~~v~~~ 414 (472)
-+++-.+++++.+++||+... +.++++++.+.+.| +|.|.+. ..|| +..+.-+.+++++.+.+++....
T Consensus 212 ~~~~~i~~i~~~~~~Pv~vkg--v~t~e~a~~a~~aG-ad~I~vs--~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GG 286 (380)
T 1p4c_A 212 FNWEALRWLRDLWPHKLLVKG--LLSAEDADRCIAEG-ADGVILS--NHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSG 286 (380)
T ss_dssp CCHHHHHHHHHHCCSEEEEEE--ECCHHHHHHHHHTT-CSEEEEC--CGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSS
T ss_pred ccHHHHHHHHHhcCCCEEEEe--cCcHHHHHHHHHcC-CCEEEEc--CCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECC
Confidence 467889999999999998655 35789999888876 7888772 2233 22233344555666778765442
Q ss_pred CCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 415 SGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 415 ~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
..+.....-- +++++..+.+|.+
T Consensus 287 -I~~~~dv~ka--l~~GAdaV~iGr~ 309 (380)
T 1p4c_A 287 -FRRGSDIVKA--LALGAEAVLLGRA 309 (380)
T ss_dssp -CCSHHHHHHH--HHTTCSCEEESHH
T ss_pred -CCCHHHHHHH--HHhCCcHhhehHH
Confidence 3333333333 3356777666654
No 239
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=32.40 E-value=2.5e+02 Score=29.60 Aligned_cols=142 Identities=11% Similarity=0.120 Sum_probs=87.8
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC--cCCHHHHHHHHhhcC--CeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD--QDDWSSWASLQSSVD--IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~--~~D~~~~~~L~~~~~--~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
.+|.++.-+. ++.-+.++.||=-+|- ++|+...+++-+..+ ++|++-=......+.+...++. +|.+.+--+
T Consensus 190 ~ltekD~~dl--~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~--sDGImVARG 265 (606)
T 3t05_A 190 GITEKDAEDI--RFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEV--SDGLMVARG 265 (606)
T ss_dssp SSCHHHHHHH--HHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHH--CSCEEEEHH
T ss_pred CCChhHHHHH--HHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHh--CCEEEEccc
Confidence 4566655443 2333577888888886 467777777765543 6666542112223444555553 899987332
Q ss_pred Ccc-------cHHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHHhh--cCCCcccC-----CCCCchhH
Q 012041 388 QIG-------TVTESIQAALDSKSAGWGVMVSHRSGETED-------NFIADLSVGL--ASGQIKTG-----APCRSERL 446 (472)
Q Consensus 388 k~G-------Gitea~~ia~~A~a~g~~~~v~~~~~Et~~-------s~~a~lAva~--~~~~i~~g-----~~~~~e~~ 446 (472)
..| -..--++++..|+++|.++++..++.|+.+ +=..|+|-|. ++..+.+. +..+-|-+
T Consensus 266 DLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~yPveaV 345 (606)
T 3t05_A 266 DMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAV 345 (606)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSCSHHHH
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCCHHHHH
Confidence 221 223346789999999999998888888742 2366777775 66666543 44566777
Q ss_pred HHhhHHH-HHHH
Q 012041 447 AKYNQLL-RIEE 457 (472)
Q Consensus 447 ~k~n~ll-~i~~ 457 (472)
...++.. +.|.
T Consensus 346 ~~m~~I~~~aE~ 357 (606)
T 3t05_A 346 KTMRNIAVSAEA 357 (606)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 7777743 4444
No 240
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=32.23 E-value=63 Score=30.43 Aligned_cols=88 Identities=15% Similarity=0.069 Sum_probs=49.4
Q ss_pred HHHHHHHhhcCCeEEeC----CccccCHHHHHH-HHHcCCCC-EEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 012041 344 SSWASLQSSVDIQLVGD----DLLVTNPKRIAE-AIQKKSCN-GLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGE 417 (472)
Q Consensus 344 ~~~~~L~~~~~~pI~~d----E~~~~~~~~~~~-~i~~~a~d-~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~E 417 (472)
+..+++++..++||++= ..+.+..+.+.+ +.+.| +| ++.+|+.- .+..+..+.++++|+..+. =....
T Consensus 81 ~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG-~dGviv~Dl~~----ee~~~~~~~~~~~gl~~i~-liap~ 154 (271)
T 1ujp_A 81 ELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAG-ATGVILPDLPP----DEDPGLVRLAQEIGLETVF-LLAPT 154 (271)
T ss_dssp HHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHT-CCEEECTTCCG----GGCHHHHHHHHHHTCEEEC-EECTT
T ss_pred HHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcC-CCEEEecCCCH----HHHHHHHHHHHHcCCceEE-EeCCC
Confidence 56788888878898772 111123334433 44555 56 77788874 5667777888999976422 11112
Q ss_pred ChhhHHHHHHHhhcCCCcccC
Q 012041 418 TEDNFIADLSVGLASGQIKTG 438 (472)
Q Consensus 418 t~~s~~a~lAva~~~~~i~~g 438 (472)
+....+..++. ...+|+...
T Consensus 155 s~~eri~~ia~-~~~gfiy~v 174 (271)
T 1ujp_A 155 STDARIATVVR-HATGFVYAV 174 (271)
T ss_dssp CCHHHHHHHHT-TCCSCEEEE
T ss_pred CCHHHHHHHHH-hCCCCEEEE
Confidence 22333333332 345677654
No 241
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=32.16 E-value=90 Score=30.09 Aligned_cols=98 Identities=12% Similarity=0.048 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHH-----hhCCeeEEeCCCCcCCHHHHHHHHhhcCC---eEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 315 AQSLGDLYKEFV-----RDFPIVSIEDPFDQDDWSSWASLQSSVDI---QLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 315 ~~eai~~~~~~l-----~~~~l~~iEdP~~~~D~~~~~~L~~~~~~---pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
..+++....+.+ .+-+-..+.+|........|..+.+..+. .+-.++....+++++++.++.+ ..+|.+..
T Consensus 99 ~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v~~~~ 177 (420)
T 1t3i_A 99 ATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEK-TKLVTVVH 177 (420)
T ss_dssp HHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTT-EEEEEEES
T ss_pred hHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCC-ceEEEEeC
Confidence 456665555544 23346778999888776667666655552 2222333334678888887653 34444433
Q ss_pred C--CcccHHHHHHHHHHHHHcCCcEEecC
Q 012041 387 N--QIGTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 387 ~--k~GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
. -.|.+.+..+++++|+++|+.+++-.
T Consensus 178 ~~nptG~~~~l~~i~~l~~~~~~~li~D~ 206 (420)
T 1t3i_A 178 ISNTLGCVNPAEEIAQLAHQAGAKVLVDA 206 (420)
T ss_dssp BCTTTCBBCCHHHHHHHHHHTTCEEEEEC
T ss_pred CcccccCcCCHHHHHHHHHHcCCEEEEEh
Confidence 2 25777888999999999999887644
No 242
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=32.02 E-value=1.9e+02 Score=29.97 Aligned_cols=139 Identities=11% Similarity=0.131 Sum_probs=86.2
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC--cCCHHHHHHHHhhc---------CCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD--QDDWSSWASLQSSV---------DIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~--~~D~~~~~~L~~~~---------~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
.+|.++-.+. .++.-+.++.||=-.|- ++|+...+++-+.. .++|++-=........+...++ ++|
T Consensus 212 ~lTekD~~D~-l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~--~sD 288 (526)
T 4drs_A 212 IIGDKDRHDI-VDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICS--ESD 288 (526)
T ss_dssp SSCHHHHHHH-HHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHH--HSS
T ss_pred cccchhHHHH-HHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHh--hcc
Confidence 4565544443 23345678888888875 46777777766543 2667665222222333444444 589
Q ss_pred EEEeccCCccc-------HHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHHhh--cCCCcccC-----C
Q 012041 381 GLLLKVNQIGT-------VTESIQAALDSKSAGWGVMVSHRSGETED-------NFIADLSVGL--ASGQIKTG-----A 439 (472)
Q Consensus 381 ~i~ik~~k~GG-------itea~~ia~~A~a~g~~~~v~~~~~Et~~-------s~~a~lAva~--~~~~i~~g-----~ 439 (472)
.|++.=+..|- ..--++|+..|+++|.++++..++.||.+ +=..|+|-|+ ++..+.+. +
T Consensus 289 gIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G 368 (526)
T 4drs_A 289 GIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANG 368 (526)
T ss_dssp EEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSC
T ss_pred EEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcc
Confidence 99986544331 22336799999999999999998888743 2366887775 67766653 3
Q ss_pred CCCchhHHHhhHHH
Q 012041 440 PCRSERLAKYNQLL 453 (472)
Q Consensus 440 ~~~~e~~~k~n~ll 453 (472)
-.+-|.+.-.++..
T Consensus 369 ~yPveaV~~m~~I~ 382 (526)
T 4drs_A 369 AFPFDAVNVMSRVC 382 (526)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 34556666666633
No 243
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=31.31 E-value=14 Score=25.54 Aligned_cols=17 Identities=6% Similarity=-0.066 Sum_probs=14.5
Q ss_pred CCCcchhhhhhhhhcCC
Q 012041 26 SYRPMRVQCSVASTASS 42 (472)
Q Consensus 26 ~~~p~~~~~~~~~~~~~ 42 (472)
-.+|.|++.+.++||+.
T Consensus 28 r~qP~Di~~Faa~yF~~ 44 (50)
T 2kyg_A 28 RQQPPDLVEFAVEYFTR 44 (50)
T ss_dssp HHCCSCHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHH
Confidence 36789999999999964
No 244
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=31.12 E-value=3e+02 Score=24.85 Aligned_cols=108 Identities=6% Similarity=0.066 Sum_probs=70.9
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcC-CHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQD-DWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~-D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+.+++++... .+-+.++.+||=.+... ..+.+++|+++++ +.+-++-. . +.+++..+++.+ +|++.. |+
T Consensus 27 ~~~~~~~~~~-al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtv-l-~~d~~~~A~~aG-Ad~v~~-----p~ 97 (224)
T 1vhc_A 27 NADDILPLAD-TLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTV-L-TAEQVVLAKSSG-ADFVVT-----PG 97 (224)
T ss_dssp SGGGHHHHHH-HHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESC-C-SHHHHHHHHHHT-CSEEEC-----SS
T ss_pred CHHHHHHHHH-HHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcE-e-eHHHHHHHHHCC-CCEEEE-----CC
Confidence 4566776644 45568899999887643 3566777888885 55555543 3 558888888887 677732 22
Q ss_pred HHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 392 VTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
.-..+++.|+..|.++++|..+ . .=+.-|...++.++++
T Consensus 98 --~d~~v~~~ar~~g~~~i~Gv~t---~--~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 98 --LNPKIVKLCQDLNFPITPGVNN---P--MAIEIALEMGISAVKF 136 (224)
T ss_dssp --CCHHHHHHHHHTTCCEECEECS---H--HHHHHHHHTTCCEEEE
T ss_pred --CCHHHHHHHHHhCCCEEeccCC---H--HHHHHHHHCCCCEEEE
Confidence 1246778888899998776431 1 1134456677888875
No 245
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=31.10 E-value=94 Score=30.91 Aligned_cols=98 Identities=14% Similarity=0.010 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHH-hhCC---eeEEeCCCCcCCHHHHHHHHhhcCCe-------EE-eCCccccCHHHHHHHHHc--CCCC
Q 012041 315 AQSLGDLYKEFV-RDFP---IVSIEDPFDQDDWSSWASLQSSVDIQ-------LV-GDDLLVTNPKRIAEAIQK--KSCN 380 (472)
Q Consensus 315 ~~eai~~~~~~l-~~~~---l~~iEdP~~~~D~~~~~~L~~~~~~p-------I~-~dE~~~~~~~~~~~~i~~--~a~d 380 (472)
..+++..+.+.+ +..+ -..+++|..+.+...+..+.+..+.. +. -++...-+++++.+.++. ....
T Consensus 137 ~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 216 (465)
T 3e9k_A 137 LTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIA 216 (465)
T ss_dssp HHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeE
Confidence 456666544444 2222 37889999988888888776666632 21 122233368999999863 2334
Q ss_pred EEEecc--CCcccHHHHHHHHHHHHHcCCcEEec
Q 012041 381 GLLLKV--NQIGTVTESIQAALDSKSAGWGVMVS 412 (472)
Q Consensus 381 ~i~ik~--~k~GGitea~~ia~~A~a~g~~~~v~ 412 (472)
+|.+-. +-.|.+.+..+++++|+++|+.+++-
T Consensus 217 lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D 250 (465)
T 3e9k_A 217 VILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFD 250 (465)
T ss_dssp EEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCcccCcceeecHHHHHHHHHHcCCEEEEE
Confidence 444433 34688889999999999999998764
No 246
>2izy_A CAMP-dependent protein kinase regulatory subunit II; D/D, RII, PKA, acetylation, transferase, CAMP- binding, phosphorylation, nucleotide-binding; 2.2A {Mus musculus} SCOP: a.31.1.1 PDB: 1l6e_A 1r2a_A 2drn_A 2h9r_A
Probab=30.76 E-value=14 Score=26.00 Aligned_cols=16 Identities=6% Similarity=-0.070 Sum_probs=14.2
Q ss_pred CCcchhhhhhhhhcCC
Q 012041 27 YRPMRVQCSVASTASS 42 (472)
Q Consensus 27 ~~p~~~~~~~~~~~~~ 42 (472)
.+|.|+|.+.++||+.
T Consensus 24 ~qP~Di~~Faa~YF~~ 39 (54)
T 2izy_A 24 QQPPDLVDFAVEYFTR 39 (54)
T ss_dssp HCCSCHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHH
Confidence 5789999999999965
No 247
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=30.33 E-value=2.9e+02 Score=24.64 Aligned_cols=108 Identities=7% Similarity=0.011 Sum_probs=70.2
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcC-CHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQD-DWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~-D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+.+++++.... +-+.++.+||=.+... ..+.+++++++++ +.+-++- . .+.+++...++.+ +|++. .|+
T Consensus 26 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-v-i~~d~~~~A~~aG-Ad~v~-----~p~ 96 (214)
T 1wbh_A 26 KLEHAVPMAKA-LVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-V-LNPQQLAEVTEAG-AQFAI-----SPG 96 (214)
T ss_dssp SGGGHHHHHHH-HHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-C-CSHHHHHHHHHHT-CSCEE-----ESS
T ss_pred CHHHHHHHHHH-HHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-E-EEHHHHHHHHHcC-CCEEE-----cCC
Confidence 45566666444 5568899999887543 3566777888886 5555554 3 3458888888887 56664 222
Q ss_pred HHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 392 VTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
.-..+++.|+.+|++++.|..+ . + =+.-|...++.++++
T Consensus 97 --~d~~v~~~~~~~g~~~i~G~~t---~-~-e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 97 --LTEPLLKAATEGTIPLIPGIST---V-S-ELMLGMDYGLKEFKF 135 (214)
T ss_dssp --CCHHHHHHHHHSSSCEEEEESS---H-H-HHHHHHHTTCCEEEE
T ss_pred --CCHHHHHHHHHhCCCEEEecCC---H-H-HHHHHHHCCCCEEEE
Confidence 2347888889999998776532 1 1 123455667888875
No 248
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=30.11 E-value=2.1e+02 Score=25.70 Aligned_cols=92 Identities=8% Similarity=0.075 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCCeeEEeCC----
Q 012041 262 EGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFPIVSIEDP---- 337 (472)
Q Consensus 262 ~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~l~~iEdP---- 337 (472)
+..+.+.+.+++.|. ++.++++.. |+.+.++.+....+.+ +..+-=|
T Consensus 120 ~~~~~~~~~~~~~g~--~~~~~i~~~--------------------------t~~e~~~~~~~~~d~~-i~~~~~~G~~g 170 (248)
T 1geq_A 120 FHAKEFTEIAREEGI--KTVFLAAPN--------------------------TPDERLKVIDDMTTGF-VYLVSLYGTTG 170 (248)
T ss_dssp GGHHHHHHHHHHHTC--EEEEEECTT--------------------------CCHHHHHHHHHHCSSE-EEEECCC----
T ss_pred hhHHHHHHHHHHhCC--CeEEEECCC--------------------------CHHHHHHHHHhcCCCe-EEEEECCccCC
Q ss_pred ----CCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 338 ----FDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 338 ----~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
+.+..++..++|++.+++||+.+-- +++++++.++++.+ +|.+.+
T Consensus 171 ~~~~~~~~~~~~i~~l~~~~~~pi~~~GG-I~~~e~i~~~~~~G-ad~viv 219 (248)
T 1geq_A 171 AREEIPKTAYDLLRRAKRICRNKVAVGFG-VSKREHVVSLLKEG-ANGVVV 219 (248)
T ss_dssp ---CCCHHHHHHHHHHHHHCSSCEEEESC-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCCCCChhHHHHHHHHHhhcCCCEEEEee-cCCHHHHHHHHHcC-CCEEEE
No 249
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=30.07 E-value=1.5e+02 Score=30.48 Aligned_cols=93 Identities=9% Similarity=0.071 Sum_probs=59.1
Q ss_pred CHHHHHHHHhhc-C-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC-------------cccHHHHHHHHHHHHHc-
Q 012041 342 DWSSWASLQSSV-D-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ-------------IGTVTESIQAALDSKSA- 405 (472)
Q Consensus 342 D~~~~~~L~~~~-~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k-------------~GGitea~~ia~~A~a~- 405 (472)
-++..++|++.. + +|++.+.. .+.++++.+++.+ +|++.+-..- ...++-..++++.+...
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V--~t~~~a~~l~~aG-ad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~ 346 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNI--VDGEGFRYLADAG-ADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYF 346 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEE--CSHHHHHHHHHHT-CSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeeccc--cCHHHHHHHHHhC-CCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHh
Confidence 356677888887 4 88887763 4678999988886 7887763311 23356666777777776
Q ss_pred -----CCcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 406 -----GWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 406 -----g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
+++++..... -+... +--|+++|+..+..|.+
T Consensus 347 ~~~~~~ipvia~GGi-~~~~d--i~kAlalGA~~V~iG~~ 383 (503)
T 1me8_A 347 EETGIYIPVCSDGGI-VYDYH--MTLALAMGADFIMLGRY 383 (503)
T ss_dssp HHHSEECCEEEESCC-CSHHH--HHHHHHTTCSEEEESHH
T ss_pred hhcCCCceEEEeCCC-CCHHH--HHHHHHcCCCEEEECch
Confidence 8998764422 22222 33445566777766654
No 250
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=29.71 E-value=2.1e+02 Score=22.78 Aligned_cols=79 Identities=11% Similarity=0.079 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCC-HHHHHHHHhhcC-CeE--EeCCccccCHHHHHHHHHcCCCCEEEeccCCc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDD-WSSWASLQSSVD-IQL--VGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQI 389 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D-~~~~~~L~~~~~-~pI--~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~ 389 (472)
+.+++++.+.+ ...+++..+.--++..| ++-.++|++..+ +|| +.+.. +.....+.++.+.++.+..|+...
T Consensus 35 ~~~~a~~~l~~-~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~---~~~~~~~~~~~g~~~~~l~KP~~~ 110 (151)
T 3kcn_A 35 SGPEALACIKK-SDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQ---DLTTAMEAVNEGQVFRFLNKPCQM 110 (151)
T ss_dssp SHHHHHHHHHH-SCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGG---GHHHHHHHHHHTCCSEEEESSCCH
T ss_pred CHHHHHHHHHc-CCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCC---CHHHHHHHHHcCCeeEEEcCCCCH
Confidence 46778766443 23478888887776544 566677777654 554 33432 357777888888778888888765
Q ss_pred ccHHHHH
Q 012041 390 GTVTESI 396 (472)
Q Consensus 390 GGitea~ 396 (472)
.-+..++
T Consensus 111 ~~L~~~i 117 (151)
T 3kcn_A 111 SDIKAAI 117 (151)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5444443
No 251
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=29.44 E-value=66 Score=28.69 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=34.5
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
.+++..+++++.+++||+++-- +++++++.++++.+ +|.+.+
T Consensus 162 ~~~~~~~~~~~~~~ipvia~GG-I~~~~~~~~~~~~G-ad~v~v 203 (223)
T 1y0e_A 162 NDFQFLKDVLQSVDAKVIAEGN-VITPDMYKRVMDLG-VHCSVV 203 (223)
T ss_dssp HHHHHHHHHHHHCCSEEEEESS-CCSHHHHHHHHHTT-CSEEEE
T ss_pred ccHHHHHHHHhhCCCCEEEecC-CCCHHHHHHHHHcC-CCEEEE
Confidence 3567788888888999988764 66799999999987 888887
No 252
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=29.24 E-value=1.5e+02 Score=27.96 Aligned_cols=81 Identities=11% Similarity=0.078 Sum_probs=52.8
Q ss_pred CCeeEEeCCCCcCCHHHHHHHHhhcC---CeEEeCCccccCHHHHHHHHHc-CCCCEEEecc-CCcccHHHHHHHHHHHH
Q 012041 329 FPIVSIEDPFDQDDWSSWASLQSSVD---IQLVGDDLLVTNPKRIAEAIQK-KSCNGLLLKV-NQIGTVTESIQAALDSK 403 (472)
Q Consensus 329 ~~l~~iEdP~~~~D~~~~~~L~~~~~---~pI~~dE~~~~~~~~~~~~i~~-~a~d~i~ik~-~k~GGitea~~ia~~A~ 403 (472)
-+...+.+|.... +....+..+ +.+-.++....+++++++.++. +..-++..-+ +-.|.+.+..+++++|+
T Consensus 123 gd~vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 198 (397)
T 3f9t_A 123 HPKIIVPITAHFS----FEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAK 198 (397)
T ss_dssp SCEEEEETTCCTH----HHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CeEEEECCcchhH----HHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 3577889997654 433333444 2332344334478999999887 4433333333 45677888999999999
Q ss_pred HcCCcEEecC
Q 012041 404 SAGWGVMVSH 413 (472)
Q Consensus 404 a~g~~~~v~~ 413 (472)
++|+.+++-.
T Consensus 199 ~~~~~li~De 208 (397)
T 3f9t_A 199 ENNIYIHVDA 208 (397)
T ss_dssp HHTCEEEEEC
T ss_pred HhCCeEEEEc
Confidence 9999887644
No 253
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=29.23 E-value=1.2e+02 Score=27.75 Aligned_cols=77 Identities=4% Similarity=-0.115 Sum_probs=47.5
Q ss_pred hcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccH------HHHHHHHHHHHHcCCcEEecCCCCCChhhHHHH
Q 012041 352 SVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTV------TESIQAALDSKSAGWGVMVSHRSGETEDNFIAD 425 (472)
Q Consensus 352 ~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGi------tea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~ 425 (472)
..|+.|+.|+. -+....+..+ ..-.+|+|.||-.-+-.+ .-...++.+|+..|+.+++-+ .|+... .+
T Consensus 164 ~~G~~ialDDf-G~g~ssl~~L-~~l~~d~iKiD~~~v~~~~~~~~~~~l~~ii~~~~~~~~~viaeG--VEt~~~--~~ 237 (268)
T 3hv8_A 164 TLHCQAAISQF-GCSLNPFNAL-KHLTVQFIKIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVPF--VESASV--LA 237 (268)
T ss_dssp HTTCEEEEEEE-TCSSSTTGGG-GTCCCSEEEECGGGGSSTTSHHHHHHHHHHHHHHHHTTCEEEECC--CCSHHH--HH
T ss_pred HCCCEEEEeCC-CCChHHHHHH-HhCCCCEEEECHHHHHhhhcChhHHHHHHHHHHHHHcCCCEEEEe--eCCHHH--HH
Confidence 44799999984 4443344333 334599999996544333 335567889999999987654 576543 23
Q ss_pred HHHhhcCCC
Q 012041 426 LSVGLASGQ 434 (472)
Q Consensus 426 lAva~~~~~ 434 (472)
....+++.+
T Consensus 238 ~l~~lG~~~ 246 (268)
T 3hv8_A 238 TLWQAGATY 246 (268)
T ss_dssp HHHHHTCSE
T ss_pred HHHHcCCCE
Confidence 333444443
No 254
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=29.01 E-value=2.9e+02 Score=24.66 Aligned_cols=95 Identities=16% Similarity=0.108 Sum_probs=54.3
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCC--------CCcCCHHHHHHHHhhcCCeEEeCCc--ccc--C---HHHHHHHHH--
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDP--------FDQDDWSSWASLQSSVDIQLVGDDL--LVT--N---PKRIAEAIQ-- 375 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP--------~~~~D~~~~~~L~~~~~~pI~~dE~--~~~--~---~~~~~~~i~-- 375 (472)
++.+++++. +.++++..||=. ....+.+.++++.+..++.+.+=.. ..+ . .+.+++.++
T Consensus 19 ~~~~~~l~~----~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 94 (272)
T 2q02_A 19 LSIEAFFRL----VKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDA 94 (272)
T ss_dssp SCHHHHHHH----HHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHH----HHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHH
Confidence 467776654 345565555532 1346788888888888866532110 000 1 123333322
Q ss_pred -cCCCCEEEeccCCccc-------HHHHHHHHHHHHHcCCcEEe
Q 012041 376 -KKSCNGLLLKVNQIGT-------VTESIQAALDSKSAGWGVMV 411 (472)
Q Consensus 376 -~~a~d~i~ik~~k~GG-------itea~~ia~~A~a~g~~~~v 411 (472)
.-.++.+.+-++..+. +....+++.+|+++|+.+.+
T Consensus 95 ~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~ 138 (272)
T 2q02_A 95 QGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLV 138 (272)
T ss_dssp HHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 2246666665544332 66677888999999999866
No 255
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=28.62 E-value=3.1e+02 Score=27.06 Aligned_cols=112 Identities=9% Similarity=0.114 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHhhCCeeEE-eCC------------CCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 314 SAQSLGDLYKEFVRDFPIVSI-EDP------------FDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~i-EdP------------~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
+.+++.++ .+.+.+.+..++ =+. +..+.+..++++++.+++|++.+= .++.++..+.+ .+|
T Consensus 154 s~e~a~~~-a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~---~d~~~~~~l~~--~vd 227 (385)
T 3nvt_A 154 SYEQVAAV-AESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEI---VTPADIEVALD--YVD 227 (385)
T ss_dssp CHHHHHHH-HHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC---CSGGGHHHHTT--TCS
T ss_pred CHHHHHHH-HHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEec---CCHHHHHHHHh--hCC
Confidence 67777776 455666664433 222 222334444555567789988763 34566655533 399
Q ss_pred EEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh--hhHHHHHHHhhcCCCc
Q 012041 381 GLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETE--DNFIADLSVGLASGQI 435 (472)
Q Consensus 381 ~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~--~s~~a~lAva~~~~~i 435 (472)
+++|--..+-- ......+...|.++.+...+.-+. +-.++......+++.+
T Consensus 228 ~lkIgs~~~~n----~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i 280 (385)
T 3nvt_A 228 VIQIGARNMQN----FELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKI 280 (385)
T ss_dssp EEEECGGGTTC----HHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred EEEECcccccC----HHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 99886655433 245555667899998887553332 2334555555555444
No 256
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=28.23 E-value=3.3e+02 Score=24.99 Aligned_cols=70 Identities=14% Similarity=0.185 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhh---CCeeEEeCCCCcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 314 SAQSLGDLYKEFVRD---FPIVSIEDPFDQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 314 s~~eai~~~~~~l~~---~~l~~iEdP~~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
+.+++..+ +.+.++ +++.|+|-.=...+.+-.+++++.+ .+|++.+=- ++++++++++.+ .+|.+.+--.
T Consensus 143 ~~e~iaa~-A~~a~~~~g~~~vY~e~sG~~g~~~~v~~ir~~~~~~pv~vGfG-I~~~e~a~~~~~--gAD~VVVGSa 216 (235)
T 3w01_A 143 TTEDLEAY-AQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGG-ISSEQQATEMAA--IADTIIVGDI 216 (235)
T ss_dssp CHHHHHHH-HHHHHHTTCCSEEEEECTTSCCCHHHHHHHHTTCSSSEEEEESC-CCSHHHHHHHHT--TSSEEEECTH
T ss_pred CHHHHHHH-HHHHHHHcCCCEEEEecCCCcCCHHHHHHHHHhcCCCCEEEECC-cCCHHHHHHHHc--CCCEEEECCc
Confidence 56666654 433343 4789999842345788899999999 788865553 678999998876 5898887443
No 257
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=27.87 E-value=48 Score=31.00 Aligned_cols=46 Identities=11% Similarity=-0.070 Sum_probs=35.5
Q ss_pred CCHHHHHHHHhhc----CCeEEeCCccccCHHHHHHHHHcC-CCCEEEeccC
Q 012041 341 DDWSSWASLQSSV----DIQLVGDDLLVTNPKRIAEAIQKK-SCNGLLLKVN 387 (472)
Q Consensus 341 ~D~~~~~~L~~~~----~~pI~~dE~~~~~~~~~~~~i~~~-a~d~i~ik~~ 387 (472)
-|++.+++|.+.+ ++||++.-- +.+++|++++++.. .++.+.+--.
T Consensus 188 ~d~eli~~l~~~~~~~~~iPVIasGG-i~s~ed~~~l~~~~~G~~gvivg~a 238 (260)
T 2agk_A 188 IDELLVSKLFEWTKDYDDLKIVYAGG-AKSVDDLKLVDELSHGKVDLTFGSS 238 (260)
T ss_dssp CCHHHHHHHHHHHTTCSSCEEEEESC-CCCTHHHHHHHHHHTTCEEEECCTT
T ss_pred CCHHHHHHHHHhhcccCCceEEEeCC-CCCHHHHHHHHHhcCCCCEEEeeCC
Confidence 4899999999999 899876442 56899999999872 3666665444
No 258
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=27.67 E-value=3.5e+02 Score=25.01 Aligned_cols=112 Identities=11% Similarity=0.140 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHhhCCeeEE-eCCCC------------cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 314 SAQSLGDLYKEFVRDFPIVSI-EDPFD------------QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~i-EdP~~------------~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
|.+.+.++ .+.+.+.+...+ =+.+. .+.+..++++++.+++|++.+=. ++.++..+.+. +|
T Consensus 35 ~~e~a~~~-a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~---d~~~~~~l~~~--vd 108 (262)
T 1zco_A 35 SREQIMKV-AEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVM---DTRHVELVAKY--SD 108 (262)
T ss_dssp CHHHHHHH-HHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECC---CGGGHHHHHHH--CS
T ss_pred CHHHHHHH-HHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeC---CHHhHHHHHhh--CC
Confidence 57777777 455666663221 12222 23334444555677899887643 44555555444 89
Q ss_pred EEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh--hHHHHHHHhhcCCCc
Q 012041 381 GLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETED--NFIADLSVGLASGQI 435 (472)
Q Consensus 381 ~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~--s~~a~lAva~~~~~i 435 (472)
+++|--..+.-..=.++ +|+ .|.++.+...+..+.. -.++......+++.+
T Consensus 109 ~~kIga~~~~n~~ll~~---~a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i 161 (262)
T 1zco_A 109 ILQIGARNSQNFELLKE---VGK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENV 161 (262)
T ss_dssp EEEECGGGTTCHHHHHH---HTT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred EEEECcccccCHHHHHH---HHh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeE
Confidence 99997765543222222 333 8999988775432322 224444444455443
No 259
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=27.59 E-value=3.3e+02 Score=25.52 Aligned_cols=93 Identities=14% Similarity=0.016 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHh-hCCeeEEeCCCCcCCHHHHHHHHhhcC---CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCC-c
Q 012041 315 AQSLGDLYKEFVR-DFPIVSIEDPFDQDDWSSWASLQSSVD---IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQ-I 389 (472)
Q Consensus 315 ~~eai~~~~~~l~-~~~l~~iEdP~~~~D~~~~~~L~~~~~---~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k-~ 389 (472)
..+++..+.+.+- +-+-..+++|.... +....+..+ +++-.++. .+++++.+.++.+..=++...++. .
T Consensus 90 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~~~~v~i~~p~npt 163 (377)
T 3fdb_A 90 VVRGLYIAIDHFTPAQSKVIVPTPAYPP----FFHLLSATQREGIFIDATGG--INLHDVEKGFQAGARSILLCNPYNPL 163 (377)
T ss_dssp HHHHHHHHHHHHSCTTCCEEEEESCCTH----HHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTTCCEEEEESSBTTT
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCcHh----HHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccCCCEEEEeCCCCCC
Confidence 4566655555443 33467788887653 333333444 33333432 468999999887644344444433 3
Q ss_pred ccH---HHHHHHHHHHHHcCCcEEecC
Q 012041 390 GTV---TESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 390 GGi---tea~~ia~~A~a~g~~~~v~~ 413 (472)
|.+ .+..+++++|+++|+.+++-.
T Consensus 164 G~~~~~~~l~~l~~~~~~~~~~li~De 190 (377)
T 3fdb_A 164 GMVFAPEWLNELCDLAHRYDARVLVDE 190 (377)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 333 478999999999999987643
No 260
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=27.27 E-value=4.3e+02 Score=26.77 Aligned_cols=123 Identities=13% Similarity=0.023 Sum_probs=75.5
Q ss_pred ccCHHHHHHHHH-HHHhhCCeeEEeCCCC--cCCHHHHHHHHhhcC--CeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 312 VLSAQSLGDLYK-EFVRDFPIVSIEDPFD--QDDWSSWASLQSSVD--IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 312 ~~s~~eai~~~~-~~l~~~~l~~iEdP~~--~~D~~~~~~L~~~~~--~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
.+|..+.-+. . .+.-+.++.||=-||- ++|+...+++-+..+ ++|++-=......+.+...++ ++|.+.+--
T Consensus 178 ~lTekD~~dl-~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~--~sDgImVaR 254 (461)
T 3qtg_A 178 TPAEEDVEAL-KAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQ--CSDYVVVAR 254 (461)
T ss_dssp SSCHHHHHHH-HHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHH--TCSEEEEEH
T ss_pred CCCHHHHHHH-HHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHH--hcccEEEcc
Confidence 3566554443 2 1344567888888885 467777776655543 666553111222344555555 489999744
Q ss_pred CCcc-------cHHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHHhh--cCCCccc
Q 012041 387 NQIG-------TVTESIQAALDSKSAGWGVMVSHRSGETED-------NFIADLSVGL--ASGQIKT 437 (472)
Q Consensus 387 ~k~G-------Gitea~~ia~~A~a~g~~~~v~~~~~Et~~-------s~~a~lAva~--~~~~i~~ 437 (472)
+..| -..--++++..|+++|.++++..++.||.+ +=..|+|-|. ++..+.+
T Consensus 255 GDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavML 321 (461)
T 3qtg_A 255 GDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWL 321 (461)
T ss_dssp HHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEE
Confidence 3322 234456789999999999998888887743 2356777554 6666654
No 261
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=27.17 E-value=3.1e+02 Score=26.95 Aligned_cols=110 Identities=5% Similarity=-0.076 Sum_probs=63.4
Q ss_pred HHHHHHHhhCCe----eEEe--CCCCcCCHHHHHHHH---hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcc
Q 012041 320 DLYKEFVRDFPI----VSIE--DPFDQDDWSSWASLQ---SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIG 390 (472)
Q Consensus 320 ~~~~~~l~~~~l----~~iE--dP~~~~D~~~~~~L~---~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~G 390 (472)
+.+.++++++++ ..|| |....+|.+...+.- +..|+.|+.|+. -+....+..+ ..-.+|+|-||-+-+-
T Consensus 292 ~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~l~~~G~~ialDDf-G~g~ssl~~L-~~l~~d~iKiD~~~i~ 369 (437)
T 3hvb_A 292 PWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQF-GCSLNPFNAL-KHLTVQFIKIDGSFVQ 369 (437)
T ss_dssp HHHHHHHHTTTCCTTCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEE-TCSSSHHHHH-TTSCCSEEEECGGGSS
T ss_pred HHHHHHHHHcCCChhhEEEEEEchhhhhCHHHHHHHHHHHHHCCCEEEEcCC-CCCccHHHHH-hhCCCCEEEECHHHHH
Confidence 344566666653 3344 222223444333332 245799999994 5554555544 3446999999965443
Q ss_pred cH------HHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 391 TV------TESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 391 Gi------tea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
.+ .-...++.+|+..|+.+++-+ .|+... .++...+++.++
T Consensus 370 ~~~~~~~~~~~~~~i~~~~~~~~~viaeg--VEt~~~--~~~l~~~G~~~~ 416 (437)
T 3hvb_A 370 DLNQVENQEILKGLIAELHEQQKLSIVPF--VESASV--LATLWQAGATYI 416 (437)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECC--CCSHHH--HHHHHHHTCSEE
T ss_pred hHhhCcHHHHHHHHHHHHHHcCCCEEeee--eCCHHH--HHHHHHcCCCEe
Confidence 32 335667889999999987643 576543 344444555443
No 262
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=27.08 E-value=83 Score=30.14 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHH-----hhCCeeEEeCCCCcCCHHHHHHHHhhcCC---eEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 315 AQSLGDLYKEFV-----RDFPIVSIEDPFDQDDWSSWASLQSSVDI---QLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 315 ~~eai~~~~~~l-----~~~~l~~iEdP~~~~D~~~~~~L~~~~~~---pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
..+++....+.+ ++-+-..+.+|.....+..|..+.+..+. .+-.++....+++++++.++.+ ..+|.+..
T Consensus 94 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~ 172 (406)
T 1kmj_A 94 TTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEK-TRLLAITH 172 (406)
T ss_dssp HHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTT-EEEEEEES
T ss_pred hhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccC-CeEEEEeC
Confidence 456666555544 33346788899888777788777666553 2222332233567888777543 34454433
Q ss_pred --CCcccHHHHHHHHHHHHHcCCcEEecC
Q 012041 387 --NQIGTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 387 --~k~GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
+-.|.+.+..+++++|+++|+.+++-.
T Consensus 173 ~~nptG~~~~l~~i~~l~~~~~~~li~D~ 201 (406)
T 1kmj_A 173 VSNVLGTENPLAEMITLAHQHGAKVLVDG 201 (406)
T ss_dssp BCTTTCCBCCHHHHHHHHHHTTCEEEEEC
T ss_pred CCccccCcCCHHHHHHHHHHcCCEEEEEc
Confidence 335777788999999999999887643
No 263
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=26.71 E-value=1.7e+02 Score=26.33 Aligned_cols=67 Identities=10% Similarity=0.093 Sum_probs=45.5
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCC----CcCCHHHHHHHHhhc--CCeEEeCCccccCHHHHHHHHHcCCCCEE
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPF----DQDDWSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAIQKKSCNGL 382 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~----~~~D~~~~~~L~~~~--~~pI~~dE~~~~~~~~~~~~i~~~a~d~i 382 (472)
|+.++..+. .+.+++.+..+|-=-. ..-+++..+.+++.+ ++||++--- +.+++++.++++.+ +|.+
T Consensus 129 l~~~~~~~~-a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GG-I~t~~da~~~l~aG-A~~i 201 (225)
T 1mzh_A 129 LNEEEIKKA-VEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGG-IRDLETAISMIEAG-ADRI 201 (225)
T ss_dssp CCHHHHHHH-HHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESS-CCSHHHHHHHHHTT-CSEE
T ss_pred CCHHHHHHH-HHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECC-CCCHHHHHHHHHhC-chHH
Confidence 566665544 6777888888884221 112778888888877 478755442 46789999999987 5643
No 264
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=26.51 E-value=2.3e+02 Score=24.76 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHhhCCeeEEe--CCCCcCCHHHHHHHHhhcCCeE-EeCCccccCHHHHHHHHHcCCCCEEEeccCCcc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIE--DPFDQDDWSSWASLQSSVDIQL-VGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIG 390 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iE--dP~~~~D~~~~~~L~~~~~~pI-~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~G 390 (472)
+.+++.+.... +.+.++.||| ++- ++..+..+++++..++++ +|+-. +.+.+++..+++.+ +|.+.+ |
T Consensus 17 d~~~~~~~~~~-~~~~G~~~i~l~~~~-~~~~~~i~~i~~~~~~~l~vg~g~-~~~~~~i~~a~~~G-ad~V~~-----~ 87 (212)
T 2v82_A 17 TPDEALAHVGA-VIDAGFDAVEIPLNS-PQWEQSIPAIVDAYGDKALIGAGT-VLKPEQVDALARMG-CQLIVT-----P 87 (212)
T ss_dssp CHHHHHHHHHH-HHHHTCCEEEEETTS-TTHHHHHHHHHHHHTTTSEEEEEC-CCSHHHHHHHHHTT-CCEEEC-----S
T ss_pred CHHHHHHHHHH-HHHCCCCEEEEeCCC-hhHHHHHHHHHHhCCCCeEEEecc-ccCHHHHHHHHHcC-CCEEEe-----C
Confidence 56666666444 4455656654 332 344667778888777543 33332 34567788887776 677752 2
Q ss_pred cHHHHHHHHHHHHHcCCcEEec
Q 012041 391 TVTESIQAALDSKSAGWGVMVS 412 (472)
Q Consensus 391 Gitea~~ia~~A~a~g~~~~v~ 412 (472)
.. ..++.+.++..|..++++
T Consensus 88 ~~--~~~~~~~~~~~g~~~~~g 107 (212)
T 2v82_A 88 NI--HSEVIRRAVGYGMTVCPG 107 (212)
T ss_dssp SC--CHHHHHHHHHTTCEEECE
T ss_pred CC--CHHHHHHHHHcCCCEEee
Confidence 21 134567777888877665
No 265
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=26.48 E-value=1.5e+02 Score=30.94 Aligned_cols=126 Identities=10% Similarity=0.040 Sum_probs=76.4
Q ss_pred cCHHHHHHHHHHHHhhCCeeEEeCCC-----------CcCCHHHHHHHHhhcC-CeE--EeC--Cc-ccc------CHHH
Q 012041 313 LSAQSLGDLYKEFVRDFPIVSIEDPF-----------DQDDWSSWASLQSSVD-IQL--VGD--DL-LVT------NPKR 369 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~l~~iEdP~-----------~~~D~~~~~~L~~~~~-~pI--~~d--E~-~~~------~~~~ 369 (472)
++.++.+++ .+.|.+.++.+||=-. .+++++-+++|++..+ +.+ ..- +. -+. ...+
T Consensus 44 ~~tedKl~I-a~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ 122 (539)
T 1rqb_A 44 MAMEDMVGA-CADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRF 122 (539)
T ss_dssp CCGGGTGGG-HHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHH
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHH
Confidence 567777766 5668889999999743 6788999999998654 333 221 00 000 1244
Q ss_pred HHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE--EecCCCC-CChhhH---HHHHHHhhcCCCcccCCCC
Q 012041 370 IAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGV--MVSHRSG-ETEDNF---IADLSVGLASGQIKTGAPC 441 (472)
Q Consensus 370 ~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~--~v~~~~~-Et~~s~---~a~lAva~~~~~i~~g~~~ 441 (472)
++.+++. .+|+|.+=.. +--+..+.+.++.|+++|..+ .++...+ -..... .+.-+..+++..+.+.+..
T Consensus 123 ve~a~~a-Gvd~vrIf~s-~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~ 198 (539)
T 1rqb_A 123 VDKSAEN-GMDVFRVFDA-MNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMA 198 (539)
T ss_dssp HHHHHHT-TCCEEEECCT-TCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETT
T ss_pred HHHHHhC-CCCEEEEEEe-hhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 5555555 4788776432 222477889999999999987 3433211 112233 4444556688877655443
No 266
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=26.41 E-value=3.4e+02 Score=28.23 Aligned_cols=137 Identities=13% Similarity=0.151 Sum_probs=83.3
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC--cCCHHHHHHHHhhcC--CeEEeC-CccccCHHHHHHHHHcCCCCEEEecc
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD--QDDWSSWASLQSSVD--IQLVGD-DLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~--~~D~~~~~~L~~~~~--~pI~~d-E~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
.+|..+.-+. ++.-+.++.||=-||- ++|+...+++-+..+ ++|++- |. ....+.+...++. +|.+.+--
T Consensus 239 alTekD~~dl--~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~-~eav~nldeIl~~--sDgImVaR 313 (550)
T 3gr4_A 239 AVSEKDIQDL--KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIEN-HEGVRRFDEILEA--SDGIMVAR 313 (550)
T ss_dssp SSCHHHHHHH--HHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECS-HHHHHTHHHHHHH--SSEEEEEH
T ss_pred CCCHHHHHHH--HHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCC-HHHHHHHHHHHHh--CCEEEEcc
Confidence 3566655443 2334567888888886 456666666654433 666542 21 2223444445553 89999743
Q ss_pred CCcc-------cHHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHHhh--cCCCccc-----CCCCCchh
Q 012041 387 NQIG-------TVTESIQAALDSKSAGWGVMVSHRSGETED-------NFIADLSVGL--ASGQIKT-----GAPCRSER 445 (472)
Q Consensus 387 ~k~G-------Gitea~~ia~~A~a~g~~~~v~~~~~Et~~-------s~~a~lAva~--~~~~i~~-----g~~~~~e~ 445 (472)
+..| -..--.+++..|+++|+++++..++.|+.+ +=..|+|-|. ++..+.+ -+..+-|-
T Consensus 314 GDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPvea 393 (550)
T 3gr4_A 314 GDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEA 393 (550)
T ss_dssp HHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHH
T ss_pred chhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHH
Confidence 3221 133346789999999999998888888753 2367777776 6766654 33345577
Q ss_pred HHHhhHHH
Q 012041 446 LAKYNQLL 453 (472)
Q Consensus 446 ~~k~n~ll 453 (472)
+.-.++..
T Consensus 394 V~~M~~I~ 401 (550)
T 3gr4_A 394 VRMQHLIA 401 (550)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76667744
No 267
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=26.20 E-value=4.1e+02 Score=26.02 Aligned_cols=124 Identities=14% Similarity=0.064 Sum_probs=76.9
Q ss_pred CccCHHHHHHHHHHHHhhCCeeEEeCCCCc---CCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 311 HVLSAQSLGDLYKEFVRDFPIVSIEDPFDQ---DDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 311 ~~~s~~eai~~~~~~l~~~~l~~iEdP~~~---~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
..++.++.+++ .+.|++.++.+||=-++. .+.+..+.+++.. ..++++--. ..+.+++..++.+ +|.+.+-.
T Consensus 20 ~~~~~~~k~~i-a~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~~~~~v~~~~r--~~~~di~~a~~~g-~~~v~i~~ 95 (382)
T 2ztj_A 20 ANFSTQDKVEI-AKALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKAKVVTHIQ--CRLDAAKVAVETG-VQGIDLLF 95 (382)
T ss_dssp CCCCHHHHHHH-HHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEEEEE--SCHHHHHHHHHTT-CSEEEEEE
T ss_pred CCcCHHHHHHH-HHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcCCCcEEEEEcc--cChhhHHHHHHcC-CCEEEEEe
Confidence 35788998887 566888999999986653 4566667776542 355554321 2468888888874 57666532
Q ss_pred CC------------cccHHHHHHHHHHHHHcC--CcEEecCCC-CCChhhHH---HHHHHhhcCCCcccCC
Q 012041 387 NQ------------IGTVTESIQAALDSKSAG--WGVMVSHRS-GETEDNFI---ADLSVGLASGQIKTGA 439 (472)
Q Consensus 387 ~k------------~GGitea~~ia~~A~a~g--~~~~v~~~~-~Et~~s~~---a~lAva~~~~~i~~g~ 439 (472)
.- -.-+..+.++++.|+++| +.+.++-.. ..+..... +..+... +..+.+.+
T Consensus 96 ~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~D 165 (382)
T 2ztj_A 96 GTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLAD 165 (382)
T ss_dssp CC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEEE
T ss_pred ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEecC
Confidence 11 112455788899999999 887665432 22233333 3444445 56665433
No 268
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=26.06 E-value=71 Score=28.74 Aligned_cols=66 Identities=18% Similarity=0.051 Sum_probs=43.1
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGV 409 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~ 409 (472)
+++.++++++.+++||+++=- +++++++.++++.+ +|.+.+=-.-..+-....++.++.+.+|+.+
T Consensus 186 ~~~~i~~l~~~~~~pvia~GG-i~~~~~~~~~~~~G-a~~v~vgsal~~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 186 DVELIRRVADSVRIPVIASGG-AGRVEHFYEAAAAG-ADAVLAASLFHFRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp CHHHHHHHHHHCSSCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHHHHHHHHTTCBC
T ss_pred CHHHHHHHHHhcCCCEEEeCC-CCCHHHHHHHHHcC-CcHHHHHHHHHcCCCCHHHHHHHHHHcCCCC
Confidence 788999999988888876653 56789999998755 6776653321111112345555667777763
No 269
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=26.03 E-value=4.2e+02 Score=24.96 Aligned_cols=121 Identities=11% Similarity=0.114 Sum_probs=77.0
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCC--eeEEeCC
Q 012041 260 NREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFP--IVSIEDP 337 (472)
Q Consensus 260 ~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~--l~~iEdP 337 (472)
.+|+.+.++.+++.++ |++.+.+-+.+ .+..+++++. +..++.+ -..+--|
T Consensus 67 ~~Er~~v~~~~~~~~~--grvpviaGvg~------------------------~~t~~ai~la-~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 67 DGEKIELLRAVLEAVG--DRARVIAGAGT------------------------YDTAHSIRLA-KACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHHHHHHHHT--TTSEEEEECCC------------------------SCHHHHHHHH-HHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHhC--CCCeEEEeCCC------------------------CCHHHHHHHH-HHHHHcCCCEEEECCC
Confidence 5788888888887764 57777776621 2567788774 4456644 4445556
Q ss_pred CC--c--C-CHHHHHHHHhhcCCeEEeCCc-----cccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCC
Q 012041 338 FD--Q--D-DWSSWASLQSSVDIQLVGDDL-----LVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGW 407 (472)
Q Consensus 338 ~~--~--~-D~~~~~~L~~~~~~pI~~dE~-----~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~ 407 (472)
.. + + =++-++.+.+.+++||+.-+. .--+++.+.++. ..-+++-+|-+ +|-+....++. ...+.
T Consensus 120 ~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La--~~pnIvgiKds-sgd~~~~~~~~---~~~~f 193 (304)
T 3l21_A 120 YYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA--SHPNIVGVXDA-KADLHSGAQIM---ADTGL 193 (304)
T ss_dssp CSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH--TSTTEEEEEEC-SCCHHHHHHHH---HHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh--cCCCEEEEECC-CCCHHHHHHHh---cCCCe
Confidence 42 2 2 234467888888899986652 112467788876 35689999986 45576666655 34567
Q ss_pred cEEecC
Q 012041 408 GVMVSH 413 (472)
Q Consensus 408 ~~~v~~ 413 (472)
.+..|.
T Consensus 194 ~v~~G~ 199 (304)
T 3l21_A 194 AYYSGD 199 (304)
T ss_dssp EEEESS
T ss_pred EEEeCc
Confidence 775544
No 270
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=26.00 E-value=2.3e+02 Score=29.28 Aligned_cols=138 Identities=13% Similarity=0.148 Sum_probs=83.4
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC--cCCHHHHHHHHhhcC--CeEEeC-CccccCHHHHHHHHHcCCCCEEEecc
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD--QDDWSSWASLQSSVD--IQLVGD-DLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~--~~D~~~~~~L~~~~~--~pI~~d-E~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
.+|.++.-+. .++.-+.++.||=-+|- ++|+...+++-+..+ ++|++- |. ....+.+...++. +|.+.+--
T Consensus 204 ~lTekD~~Dl-~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~-~eav~nldeIl~~--sDgimVaR 279 (511)
T 3gg8_A 204 VIGEKDKHDI-LNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIEN-VEGLVNFDEILAE--ADGIMIAR 279 (511)
T ss_dssp SSCHHHHHHH-HHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECS-HHHHHTHHHHHHH--CSCEEEEH
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECC-HHHHHhHHHHHHh--CCeEEEec
Confidence 3566654433 13445678889988986 467777776655433 555543 21 1223334445543 69999843
Q ss_pred CCcc---cH----HHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHHhh--cCCCccc-----CCCCCchh
Q 012041 387 NQIG---TV----TESIQAALDSKSAGWGVMVSHRSGETED-------NFIADLSVGL--ASGQIKT-----GAPCRSER 445 (472)
Q Consensus 387 ~k~G---Gi----tea~~ia~~A~a~g~~~~v~~~~~Et~~-------s~~a~lAva~--~~~~i~~-----g~~~~~e~ 445 (472)
+..| ++ .--.+++..|+++|.++++..++.|+.+ +=..|+|-|. ++..+.+ -+..+-|-
T Consensus 280 GDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~yPvea 359 (511)
T 3gg8_A 280 GDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVIT 359 (511)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHH
T ss_pred chhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCHHHH
Confidence 2221 12 2346788899999999999888888743 2366777776 6666654 33445566
Q ss_pred HHHhhHHH
Q 012041 446 LAKYNQLL 453 (472)
Q Consensus 446 ~~k~n~ll 453 (472)
+...++..
T Consensus 360 V~~M~~I~ 367 (511)
T 3gg8_A 360 VETMARIC 367 (511)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666643
No 271
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=25.81 E-value=4.2e+02 Score=24.94 Aligned_cols=124 Identities=10% Similarity=0.006 Sum_probs=78.0
Q ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEecccccccccCcceeecCCCCCCCCCCccCHHHHHHHHHHHHhhCC--eeEEeCC
Q 012041 260 NREGLVLLTDAIEKAGYTGKINIGMDVAASEFFTKDGNYDLNFKKQPNDGAHVLSAQSLGDLYKEFVRDFP--IVSIEDP 337 (472)
Q Consensus 260 ~~~~l~~v~~av~~~g~~g~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~n~~~s~~eai~~~~~~l~~~~--l~~iEdP 337 (472)
.+|+.+.++.+++.++ |++.+.+-+.+ .+..+++++ .+..++.+ -..+--|
T Consensus 66 ~~Er~~v~~~~~~~~~--gr~pviaGvg~------------------------~~t~~ai~l-a~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 66 SSERLEVVSRVRQAMP--KNRLLLAGSGC------------------------ESTQATVEM-TVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHHHHHHHHTSC--TTSEEEEECCC------------------------SSHHHHHHH-HHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHcC--CCCcEEEecCC------------------------CCHHHHHHH-HHHHHHcCCCEEEEcCC
Confidence 5788888887777653 57777766621 256788877 45566655 3455567
Q ss_pred CCc----C---CHHHHHHHHhhcCCeEEeCCcc-----ccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHc
Q 012041 338 FDQ----D---DWSSWASLQSSVDIQLVGDDLL-----VTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSA 405 (472)
Q Consensus 338 ~~~----~---D~~~~~~L~~~~~~pI~~dE~~-----~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~ 405 (472)
... . =++-++.+.+.+++||+.-+.- --+++.+.++.+ .-+++-+|-+ +|-+....++.+.....
T Consensus 119 ~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~--~pnIvgiKds-sgd~~~~~~~~~~~~~~ 195 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ--HPNIVGMXDS-GGDVTRIGLIVHKTRKQ 195 (307)
T ss_dssp CTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT--STTEEEEEEC-SCCHHHHHHHHHHTTTS
T ss_pred CcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc--CCCEEEEEcC-CCCHHHHHHHHHhccCC
Confidence 542 2 2245577788888999876631 124677888763 5789999987 46676666655543334
Q ss_pred CCcEEecC
Q 012041 406 GWGVMVSH 413 (472)
Q Consensus 406 g~~~~v~~ 413 (472)
++.++.|+
T Consensus 196 ~f~v~~G~ 203 (307)
T 3s5o_A 196 DFQVLAGS 203 (307)
T ss_dssp SCEEEESS
T ss_pred CeEEEeCc
Confidence 57765444
No 272
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=25.80 E-value=1.5e+02 Score=28.10 Aligned_cols=67 Identities=7% Similarity=0.002 Sum_probs=48.8
Q ss_pred HHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcc---cHHHHHHHHHHHHHcCCcE--EecCC
Q 012041 347 ASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIG---TVTESIQAALDSKSAGWGV--MVSHR 414 (472)
Q Consensus 347 ~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~G---Gitea~~ia~~A~a~g~~~--~v~~~ 414 (472)
+.+.++.++||+.-=-...+.+.+.+.++.+ ++.+++|-+..- =|..+++++++|++.|+.+ -+|+-
T Consensus 67 ~~~a~~~~VPValHlDHg~~~e~i~~ai~~G-FtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~v 138 (286)
T 1gvf_A 67 SAYSTTYNMPLALHLDHHESLDDIRRKVHAG-VRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRL 138 (286)
T ss_dssp HHHHHHTTSCBEEEEEEECCHHHHHHHHHTT-CCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred HHHHHhCCCcEEEEcCCCCCHHHHHHHHHcC-CCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 3344455666654322356789999999987 899999998753 3667899999999999887 44553
No 273
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=25.80 E-value=80 Score=30.55 Aligned_cols=97 Identities=7% Similarity=-0.062 Sum_probs=57.1
Q ss_pred HHHHHH-HHHHhhCCeeEEeCCCCcCCHHHHHHH--H-hhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 317 SLGDLY-KEFVRDFPIVSIEDPFDQDDWSSWASL--Q-SSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 317 eai~~~-~~~l~~~~l~~iEdP~~~~D~~~~~~L--~-~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+++... ..++.+-+...+++|....-+.....+ . .... +++-.|+....+++++.+.++.....++.+-.+..|+
T Consensus 103 ~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~ 182 (420)
T 3gbx_A 103 QANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG 182 (420)
T ss_dssp HHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS
T ss_pred HHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC
Confidence 344433 333444557788888764422111111 1 1111 3443444344578999998887556777775566688
Q ss_pred HHHHHHHHHHHHHcCCcEEecC
Q 012041 392 VTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~ 413 (472)
+.+..+++++|+++|+.+++-.
T Consensus 183 ~~~l~~l~~l~~~~~~~li~De 204 (420)
T 3gbx_A 183 VVDWAKMREIADSIGAYLFVDM 204 (420)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEC
T ss_pred ccCHHHHHHHHHHcCCEEEEEC
Confidence 8899999999999999887643
No 274
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=25.72 E-value=1.2e+02 Score=29.13 Aligned_cols=97 Identities=8% Similarity=-0.131 Sum_probs=53.9
Q ss_pred HHHHHHHHHH-hhCCeeEEeCCCCcCCHHHHHHHHhh-cC---CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 317 SLGDLYKEFV-RDFPIVSIEDPFDQDDWSSWASLQSS-VD---IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 317 eai~~~~~~l-~~~~l~~iEdP~~~~D~~~~~~L~~~-~~---~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+++....+.+ .+-+-.++++|....-......+... .+ +++-.++....+++++.+.++.....+|.+-....|.
T Consensus 98 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~G~ 177 (417)
T 3n0l_A 98 QANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAYAR 177 (417)
T ss_dssp HHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSCCS
T ss_pred HHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCcccCc
Confidence 4554443433 33457788988664322212222111 11 2332333334578999998874445666665545688
Q ss_pred HHHHHHHHHHHHHcCCcEEecC
Q 012041 392 VTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~ 413 (472)
+.+..+++++|+++|+.+++-.
T Consensus 178 ~~~l~~i~~l~~~~~~~li~De 199 (417)
T 3n0l_A 178 VIDFAKFREIADEIGAYLFADI 199 (417)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEC
T ss_pred cCCHHHHHHHHHHcCCEEEEEC
Confidence 8889999999999999987643
No 275
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=25.51 E-value=2.8e+02 Score=24.55 Aligned_cols=92 Identities=9% Similarity=-0.009 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCc---CCHHHHHHHHhhc-CCeEEeCCccccCHHHH-HHHHHcCCCCEEEeccCC
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQ---DDWSSWASLQSSV-DIQLVGDDLLVTNPKRI-AEAIQKKSCNGLLLKVNQ 388 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~---~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~-~~~i~~~a~d~i~ik~~k 388 (472)
+.+++++.+.+ ++. ++.|+|--++. .-++..++|++.. +.||..|=-....+..+ +.+.+. .+|++.+...-
T Consensus 17 ~~~~~~~~~~~-~~~-~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~a-Gad~i~vh~~~ 93 (218)
T 3jr2_A 17 NLTDAVAVASN-VAS-YVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEA-GADWITVSAAA 93 (218)
T ss_dssp SHHHHHHHHHH-HGG-GCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHH-TCSEEEEETTS
T ss_pred CHHHHHHHHHH-hcC-CceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhc-CCCEEEEecCC
Confidence 57788887655 543 58888865432 3456778888884 57776643222223443 334444 47888876543
Q ss_pred cccHHHHHHHHHHHHHcCCcEE
Q 012041 389 IGTVTESIQAALDSKSAGWGVM 410 (472)
Q Consensus 389 ~GGitea~~ia~~A~a~g~~~~ 410 (472)
+.....++.+.++++|+.++
T Consensus 94 --~~~~~~~~~~~~~~~g~~~~ 113 (218)
T 3jr2_A 94 --HIATIAACKKVADELNGEIQ 113 (218)
T ss_dssp --CHHHHHHHHHHHHHHTCEEE
T ss_pred --CHHHHHHHHHHHHHhCCccc
Confidence 23334677788888999875
No 276
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=25.39 E-value=1.9e+02 Score=28.71 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=56.1
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC----CcccHHHHHHHHHHHHHc--CCcEEecCCC
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN----QIGTVTESIQAALDSKSA--GWGVMVSHRS 415 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~----k~GGitea~~ia~~A~a~--g~~~~v~~~~ 415 (472)
.++..++|++.+++||+.-.. .++++++.+.+.+ +|+|.+.-. .-+|...+.-+.++.++. +++++... .
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv--~~~e~A~~a~~aG-ad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~G-G 315 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGI--LRGDDAREAVKHG-LNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDG-G 315 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEE--CCHHHHHHHHHTT-CCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECS-S
T ss_pred HHHHHHHHHHhhCCCEEEEec--CCHHHHHHHHHcC-CCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEEC-C
Confidence 577789999999999987763 5688888888776 788887321 112344444445555554 48876544 2
Q ss_pred CCChhhHHHHHHHhhcCCCcccCCC
Q 012041 416 GETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 416 ~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
..++....-- +++++..+.+|-+
T Consensus 316 I~~g~Dv~ka--lalGAd~V~iGr~ 338 (392)
T 2nzl_A 316 VRKGTDVLKA--LALGAKAVFVGRP 338 (392)
T ss_dssp CCSHHHHHHH--HHTTCSEEEECHH
T ss_pred CCCHHHHHHH--HHhCCCeeEECHH
Confidence 3444333333 3456777776654
No 277
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=25.16 E-value=2.1e+02 Score=27.51 Aligned_cols=94 Identities=5% Similarity=-0.012 Sum_probs=54.7
Q ss_pred HHHHHHHHhhcCCeEEeCCc-cccCHHHHHHHHHcCCCCEEEeccC--------------------CcccHHHHHHHHHH
Q 012041 343 WSSWASLQSSVDIQLVGDDL-LVTNPKRIAEAIQKKSCNGLLLKVN--------------------QIGTVTESIQAALD 401 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~-~~~~~~~~~~~i~~~a~d~i~ik~~--------------------k~GGitea~~ia~~ 401 (472)
++..+++++.+++||+.-.. +..++++++.+.+.+ +|+|.+.-. .-+|++....+..+
T Consensus 167 ~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~G-ad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v 245 (349)
T 1p0k_A 167 LKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAG-AAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEI 245 (349)
T ss_dssp HHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHT-CSEEEEEC---------------CCGGGGTTCSCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcC-CCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHH
Confidence 35677788888888765431 224577777777665 777776311 23456666566666
Q ss_pred HHHc-CCcEEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 402 SKSA-GWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 402 A~a~-g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
++.. +++++.... ..+.....--+ ++++..+.+|.+
T Consensus 246 ~~~~~~ipvia~GG-I~~~~d~~k~l--~~GAd~V~iG~~ 282 (349)
T 1p0k_A 246 RSEFPASTMIASGG-LQDALDVAKAI--ALGASCTGMAGH 282 (349)
T ss_dssp HHHCTTSEEEEESS-CCSHHHHHHHH--HTTCSEEEECHH
T ss_pred HHhcCCCeEEEECC-CCCHHHHHHHH--HcCCCEEEEcHH
Confidence 6765 788765442 33333332333 346777766654
No 278
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=24.88 E-value=85 Score=30.94 Aligned_cols=95 Identities=13% Similarity=0.160 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHH-HhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEecc--CCcccH
Q 012041 316 QSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASL-QSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV--NQIGTV 392 (472)
Q Consensus 316 ~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L-~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~--~k~GGi 392 (472)
.+++..+..++.+-+-..+.+|.....+..+..+ .+..++.+.-=+ ..+++++++.++.+ ..+|.+.. +-.|-+
T Consensus 92 ~~Ai~~~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~i~~~-~~~v~~e~~~np~G~~ 168 (400)
T 3nmy_A 92 MAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD--LTDPAAFKAAIRAD-TKMVWIETPTNPMLKL 168 (400)
T ss_dssp HHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC--TTSHHHHHHHCCTT-EEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC--CCCHHHHHHHhccC-CCEEEEECCCCCCCee
Confidence 3455444444555556778899887666666666 556675443222 13578888887653 34444433 345778
Q ss_pred HHHHHHHHHHHHcCCcEEecC
Q 012041 393 TESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 393 tea~~ia~~A~a~g~~~~v~~ 413 (472)
.+..+++++|+++|+.+++-.
T Consensus 169 ~~l~~i~~la~~~g~~livDe 189 (400)
T 3nmy_A 169 VDIAAIAVIARKHGLLTVVDN 189 (400)
T ss_dssp CCHHHHHHHHHHTTCEEEEEC
T ss_pred ecHHHHHHHHHHcCCEEEEEC
Confidence 889999999999999987755
No 279
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=24.72 E-value=2.9e+02 Score=24.89 Aligned_cols=108 Identities=6% Similarity=0.007 Sum_probs=70.2
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcC-CHHHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQD-DWSSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~-D~~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
+.+++++... .+-+.++.+||=.+... ..+.+++++++++ +.+-++-. . +.+++...++.+ +|++. .|+
T Consensus 36 ~~~~~~~~~~-al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagtv-l-~~d~~~~A~~aG-Ad~v~-----~p~ 106 (225)
T 1mxs_A 36 REEDILPLAD-ALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTV-L-DRSMFAAVEAAG-AQFVV-----TPG 106 (225)
T ss_dssp CGGGHHHHHH-HHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECC-C-SHHHHHHHHHHT-CSSEE-----CSS
T ss_pred CHHHHHHHHH-HHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCeE-e-eHHHHHHHHHCC-CCEEE-----eCC
Confidence 4456666644 45568899999887543 3455677888885 66655643 3 558888888887 56554 333
Q ss_pred HHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 392 VTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 392 itea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
. -..+++.|+.+|++++.|..+ . + =+.-|...++.++++
T Consensus 107 ~--d~~v~~~~~~~g~~~i~G~~t---~-~-e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 107 I--TEDILEAGVDSEIPLLPGIST---P-S-EIMMGYALGYRRFKL 145 (225)
T ss_dssp C--CHHHHHHHHHCSSCEECEECS---H-H-HHHHHHTTTCCEEEE
T ss_pred C--CHHHHHHHHHhCCCEEEeeCC---H-H-HHHHHHHCCCCEEEE
Confidence 2 347888899999998766532 1 1 123455667888876
No 280
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=24.68 E-value=3.6e+02 Score=26.03 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEE---ecccccccc--------------cC-cceeecCCCCCCCCCCccCHHHHHHHH
Q 012041 261 REGLVLLTDAIEKAGYTGKINIGM---DVAASEFFT--------------KD-GNYDLNFKKQPNDGAHVLSAQSLGDLY 322 (472)
Q Consensus 261 ~~~l~~v~~av~~~g~~g~i~l~v---D~~a~~~~~--------------~~-~~y~~~~~~~~~~~n~~~s~~eai~~~ 322 (472)
.-++.++|+++++.|+. ++.||- -. ++.||. .| ..|+.+.. +..||++..
T Consensus 179 DGrV~aIR~aLd~~G~~-~v~ImsYsaKy-ASafYGPFRdAa~Sap~f~~GDrktYQmdpa----------N~~EAlrE~ 246 (337)
T 1w5q_A 179 DGRIGAIREALESAGHT-NVRVMAYSAKY-ASAYYGPFRDAVGSASNLGKGNRATYQMDPA----------NSDEALHEV 246 (337)
T ss_dssp TTHHHHHHHHHHHTTCT-TCEEEEEEEEB-CCGGGHHHHHC----------CGGGTSBCTT----------CSHHHHHHH
T ss_pred ccHHHHHHHHHHHCCCC-CceeehhHHHH-HHHHHHHHHHHhcCCcccCCCCccccCCCCC----------ChHHHHHHH
Confidence 45788999999999884 677763 22 233441 11 35665522 345666654
Q ss_pred HHHHhh-CCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHH
Q 012041 323 KEFVRD-FPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALD 401 (472)
Q Consensus 323 ~~~l~~-~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~ 401 (472)
..-+++ .++.++-=-++ -++-.+++++++.+|+++-..+ .-..-++...++|+.| | + .+.|++...+
T Consensus 247 ~~Di~EGAD~vMVKPal~--YLDIir~vk~~~~~PvaaYqVS-GEYAMikaAa~~GwiD----~--~--~v~Esl~~~k- 314 (337)
T 1w5q_A 247 AADLAEGADMVMVKPGMP--YLDIVRRVKDEFRAPTFVYQVS-GEYAMHMGAIQNGWLA----E--S--VILESLTAFK- 314 (337)
T ss_dssp HHHHHTTCSEEEEESCGG--GHHHHHHHHHHHCSCEEEEECH-HHHHHHHHHHHTTSSC----T--T--HHHHHHHHHH-
T ss_pred HhhHHhCCCEEEEcCCCc--hHHHHHHHHHhcCCCEEEEEcC-cHHHHHHHHHHcCCcc----H--H--HHHHHHHHHH-
Confidence 433444 77888886666 4677899999999999887743 2235566677788776 1 1 2445544443
Q ss_pred HHHcCCcEEe
Q 012041 402 SKSAGWGVMV 411 (472)
Q Consensus 402 A~a~g~~~~v 411 (472)
.+|-.+++
T Consensus 315 --RAGAd~Ii 322 (337)
T 1w5q_A 315 --RAGADGIL 322 (337)
T ss_dssp --HHTCSEEE
T ss_pred --hcCCCEEe
Confidence 45666554
No 281
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=24.64 E-value=3.8e+02 Score=24.97 Aligned_cols=60 Identities=13% Similarity=0.036 Sum_probs=42.8
Q ss_pred HHHhhcCCeEEeCCccccCHHHHHHHHHc-CCCCEEE-eccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 012041 348 SLQSSVDIQLVGDDLLVTNPKRIAEAIQK-KSCNGLL-LKVNQIGTVTESIQAALDSKSAGWGVMVSHR 414 (472)
Q Consensus 348 ~L~~~~~~pI~~dE~~~~~~~~~~~~i~~-~a~d~i~-ik~~k~GGitea~~ia~~A~a~g~~~~v~~~ 414 (472)
.|++.+++||+-|-. +++-++..++. +.+++|| +. |+-...-+++.+|.++|.++++-|+
T Consensus 72 ~l~~~~~~pisIDT~---~~~v~~aal~a~~Ga~iINdvs----~~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 72 TIQEVVDLPCCLDST---NPDAIEAGLKVHRGHAMINSTS----ADQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp HHHHHCCCCEEEECS---CHHHHHHHHHHCCSCCEEEEEC----SCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHhCCCeEEEeCC---CHHHHHHHHHhCCCCCEEEECC----CCccccHHHHHHHHHcCCCEEEEec
Confidence 444556899999863 67888888876 1367766 43 2323356889999999999999996
No 282
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=24.62 E-value=70 Score=29.03 Aligned_cols=43 Identities=9% Similarity=0.236 Sum_probs=34.0
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHc-----CCCCEEEe
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQK-----KSCNGLLL 384 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~-----~a~d~i~i 384 (472)
-|++.+++|++.+++||++.- -+++++++.++.+. +.+|.+.+
T Consensus 175 ~~~~~i~~l~~~~~iPvia~G-GI~~~~d~~~~~~~~~~~~G~adgv~v 222 (241)
T 1qo2_A 175 HDFSLTKKIAIEAEVKVLAAG-GISSENSLKTAQKVHTETNGLLKGVIV 222 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEES-SCCSHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCHHHHHHHHHhcCCcEEEEC-CCCCHHHHHHHHhcccccCCeEeEEEe
Confidence 379999999999999987654 26789999999887 42677665
No 283
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=24.27 E-value=3.5e+02 Score=26.29 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=56.1
Q ss_pred HHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHH-------HHHHHHHHHHcCCcEEecCCCCC
Q 012041 345 SWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTE-------SIQAALDSKSAGWGVMVSHRSGE 417 (472)
Q Consensus 345 ~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGite-------a~~ia~~A~a~g~~~~v~~~~~E 417 (472)
.+++|+ ..|+.|+.|+. -+....+.. +..--+|.+-||-+-+-++.. ...++.+|+..|+.++.-+ .|
T Consensus 281 ~l~~l~-~~G~~ialDDf-G~g~ssl~~-L~~l~~d~iKiD~~~v~~~~~~~~~~~~v~~i~~~a~~l~~~vvaEG--VE 355 (400)
T 3sy8_A 281 NLVRLW-IMGCGLAMDDF-GAGYSSLDR-LCEFPFSQIKLDRTFVQKMKTQPRSCAVISSVVALAQALGISLVVEG--VE 355 (400)
T ss_dssp HHHHHH-HHTCEEEEEEE-CSCSGGGGS-SSSCCCSEEEECTHHHHHHHHCTTHHHHHHHHHHHHHHHTCEEEECC--CC
T ss_pred HHHHHH-HCCCEEEEECC-CCchhhHHH-HHhCCCCEEEECHHHHhhhhcChhHHHHHHHHHHHHHHcCCeEEEec--CC
Confidence 334444 35899999994 455444433 334468999999765555532 5668899999999986544 56
Q ss_pred ChhhHHHHHHHhhcCCCc---ccCCCCC
Q 012041 418 TEDNFIADLSVGLASGQI---KTGAPCR 442 (472)
Q Consensus 418 t~~s~~a~lAva~~~~~i---~~g~~~~ 442 (472)
+... .++...+++.+. .++-|.+
T Consensus 356 t~~~--~~~l~~~g~~~~QGy~~~~P~~ 381 (400)
T 3sy8_A 356 SDEQ--RVRLIELGCSIAQGYLFARPMP 381 (400)
T ss_dssp CHHH--HHHHHHHTCCEECBTTTBCCBC
T ss_pred cHHH--HHHHHHcCCCEEEcCeecCcCC
Confidence 6543 344444555444 2444433
No 284
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=24.26 E-value=4.1e+02 Score=24.17 Aligned_cols=69 Identities=7% Similarity=0.040 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHhh--CCeeEEeCCCCcCCHHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 314 SAQSLGDLYKEFVRD--FPIVSIEDPFDQDDWSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 314 s~~eai~~~~~~l~~--~~l~~iEdP~~~~D~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
+.+++..+ +...+- +++.++|--=...|.+-.+++++.+ .+|++.+-- +++++++++++ . .+|.+.+--
T Consensus 138 ~~e~~~~~-a~~a~~~g~~~VYld~sG~~~~~~~i~~i~~~~~~~Pv~vGGG-I~t~e~a~~~~-~-gAD~VVVGS 209 (228)
T 3vzx_A 138 NMDDIVAY-ARVSELLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFYGGG-IKDAETAKQYA-E-HADVIVVGN 209 (228)
T ss_dssp CHHHHHHH-HHHHHHTTCSEEEEECTTSCCCHHHHHHHHHHCSSSEEEEESS-CCSHHHHHHHH-T-TCSEEEECT
T ss_pred CHHHHHHH-HHHHHHcCCCEEEecCCCCcCCHHHHHHHHHhcCCCCEEEeCC-CCCHHHHHHHH-h-CCCEEEECh
Confidence 56666544 443332 5788998721234899999999999 688865543 67899999987 4 589888743
No 285
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=24.17 E-value=91 Score=29.34 Aligned_cols=42 Identities=17% Similarity=0.227 Sum_probs=33.7
Q ss_pred HHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEecc
Q 012041 343 WSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
++..+++++.+++||++.-- +.+++++.++++.+ +|.+++--
T Consensus 230 ~~~i~~i~~~~~ipvia~GG-I~~~~d~~~~l~~G-Ad~V~vg~ 271 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGG-VANAQDVLEMYMAG-ASAVAVGT 271 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSS-CCSHHHHHHHHHHT-CSEEEECT
T ss_pred HHHHHHHHHhcCCCEEEECC-cCCHHHHHHHHHcC-CCEEEECH
Confidence 46667888888899987764 67899999999988 89998744
No 286
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=23.77 E-value=2.4e+02 Score=27.69 Aligned_cols=110 Identities=11% Similarity=0.023 Sum_probs=66.0
Q ss_pred HHHHHHHHHhhCC-------eeEEeCCCCcCCHHHHHHHH---hhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC
Q 012041 318 LGDLYKEFVRDFP-------IVSIEDPFDQDDWSSWASLQ---SSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN 387 (472)
Q Consensus 318 ai~~~~~~l~~~~-------l~~iEdP~~~~D~~~~~~L~---~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~ 387 (472)
.++.+.+.+++++ +..-|..+.. + +...++. +..|+.|+.|+ +-+....+..+... -+|.|-||-+
T Consensus 292 ~~~~l~~~l~~~~~~~~~l~lEitE~~~~~-~-~~~~~~~~~l~~~G~~ialDd-fG~g~ssl~~L~~l-~~d~iKiD~~ 367 (430)
T 3pjx_A 292 ALNKVFEILRAHSNLGARLTLEIGEEQLPE-Q-AVLEQLTRRLRELGFSLSLQR-FGGRFSMIGNLARL-GLAYLKIDGS 367 (430)
T ss_dssp HHHHHHHHHHTTGGGGGGEEEEEEGGGCCC-H-HHHHHHHHHHHHHTCEEEEEE-ECCCHHHHCTHHHH-CCSCEEECGG
T ss_pred HHHHHHHHHHhcCCCCceEEEEEECccccc-c-HHHHHHHHHHHHCCCEEEEeC-CCCCchhHHHHHhC-CCCEEEECHH
Confidence 3444555666554 3344655543 3 4443332 34589999999 46666666555444 5999999965
Q ss_pred CcccHH-------HHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHHhhcCCCc
Q 012041 388 QIGTVT-------ESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQI 435 (472)
Q Consensus 388 k~GGit-------ea~~ia~~A~a~g~~~~v~~~~~Et~~s~~a~lAva~~~~~i 435 (472)
-+-.+. =...++.+|+..|+.++.-+ .|+... .++...+++.++
T Consensus 368 ~v~~~~~~~~~~~~~~~i~~~a~~l~~~viaeG--VEt~~~--~~~l~~~g~~~~ 418 (430)
T 3pjx_A 368 YIRAIDQESDKRLFIEAIQRAAHSIDLPLIAER--VETEGE--LSVIREMGLYGV 418 (430)
T ss_dssp GTTTTTTCHHHHHHHHHHHHHHHTTTCCEEECC--CCCHHH--HHHHHHTTCSEE
T ss_pred HHHhHhcChhhHHHHHHHHHHHHHCCCcEEEEe--cCCHHH--HHHHHHcCCCee
Confidence 544432 25667889999999986544 566433 344444555443
No 287
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=23.48 E-value=5.1e+02 Score=25.64 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=35.0
Q ss_pred hCCeeEEe-CCCCcCCHHHHHHHHhhcCCeEEeCCccccCH----HHHHHHHHcCCCCEE
Q 012041 328 DFPIVSIE-DPFDQDDWSSWASLQSSVDIQLVGDDLLVTNP----KRIAEAIQKKSCNGL 382 (472)
Q Consensus 328 ~~~l~~iE-dP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~----~~~~~~i~~~a~d~i 382 (472)
+-++.|+- -|..--+..+|.++.++-++||+||++ -+.- ..+..++..+...+.
T Consensus 186 ~aG~~fvN~~P~~ia~~P~~~ela~~~gvpi~GdD~-ktG~T~~k~~L~~~l~~rgl~v~ 244 (394)
T 3cin_A 186 RGGAAFVNVIPTFIANDPAFVELAKENNLVVFGDDG-ATGATPFTADVLSHLAQRNRYVK 244 (394)
T ss_dssp HTCEEEEECSSSCSTTCHHHHHHHHHTTEEEECSSB-SCSHHHHHHHHHHHHHHTTCEEE
T ss_pred hcCCceecCCCccccCcHHHHHHHHHcCCcEecccc-cccchhHHHHHHHHHHHCCCeEe
Confidence 45777774 354444568899999999999999994 5542 233344444444433
No 288
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=23.38 E-value=3.1e+02 Score=26.00 Aligned_cols=95 Identities=18% Similarity=-0.023 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHH-hhCCeeEEeCCCCcCCHHHHHHHHhhcCC---eEEe------CCccccCHHHHHHHHHcCCCCEEEe
Q 012041 315 AQSLGDLYKEFV-RDFPIVSIEDPFDQDDWSSWASLQSSVDI---QLVG------DDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 315 ~~eai~~~~~~l-~~~~l~~iEdP~~~~D~~~~~~L~~~~~~---pI~~------dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
..+++..+.+.+ .+-+-.++++|... ++....+..+. ++-. ++...-+++++.+.++.+..-++..
T Consensus 111 ~~~a~~~~~~~l~~~gd~vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~ 186 (407)
T 3nra_A 111 TQGALFLAVAATVARGDKVAIVQPDYF----ANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFS 186 (407)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCCT----HHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEE
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCccc----chHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEc
Confidence 345655544433 34457788999765 34444445552 3322 1323447899999888754334444
Q ss_pred ccCC-cccHH---HHHHHHHHHHHcCCcEEecC
Q 012041 385 KVNQ-IGTVT---ESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 385 k~~k-~GGit---ea~~ia~~A~a~g~~~~v~~ 413 (472)
.++. .|.+. +..+++++|+++|+.+++-.
T Consensus 187 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 219 (407)
T 3nra_A 187 NPNNPAGVVYSAEEIGQIAALAARYGATVIADQ 219 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEc
Confidence 4433 34443 48999999999999987643
No 289
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=23.34 E-value=4.4e+02 Score=24.49 Aligned_cols=95 Identities=13% Similarity=0.096 Sum_probs=59.9
Q ss_pred cCHHHHHHHHHHHHhhCC-----eeEEeCCCC-------cCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCC
Q 012041 313 LSAQSLGDLYKEFVRDFP-----IVSIEDPFD-------QDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCN 380 (472)
Q Consensus 313 ~s~~eai~~~~~~l~~~~-----l~~iEdP~~-------~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d 380 (472)
.+++...+.+.+-|++++ +.++-.|.. .+-++.+.+|++.-.+.-+|=- ..+++.+.++++. .+
T Consensus 130 ~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gkir~iGvS--n~~~~~l~~~~~~--~~ 205 (292)
T 4exb_A 130 FSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLS--GKTVEGGLRALRE--GD 205 (292)
T ss_dssp CCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSEEEEEEE--CSSHHHHHHHHHH--SS
T ss_pred CCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCCCceEEEeC--CCCHHHHHHHHHh--hc
Confidence 355555555555555544 566767732 2456677777766555444322 2357888888877 88
Q ss_pred EEEeccCCcccHHHHHHHHHHHHHcCCcEEecC
Q 012041 381 GLLLKVNQIGTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 381 ~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
++|+..+-.--- . .++..+|+++|+.++.-.
T Consensus 206 ~~Q~~~~~~~~~-~-~~l~~~~~~~gi~v~a~s 236 (292)
T 4exb_A 206 CAMVTYNLNERA-E-RPVIEYAAAHAKGILVKK 236 (292)
T ss_dssp EEEEECSSSCCT-T-HHHHHHHHHTTCEEEEEC
T ss_pred EEeeccccccCC-H-HHHHHHHHHCCcEEEEec
Confidence 999877643211 1 688999999999986543
No 290
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=22.94 E-value=76 Score=28.79 Aligned_cols=44 Identities=9% Similarity=0.108 Sum_probs=35.2
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcC--CCCEEEec
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKK--SCNGLLLK 385 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~--a~d~i~ik 385 (472)
-|++.++++++.+++||+++-- +++++++.++++.. .+|.+.+=
T Consensus 177 ~~~~~~~~i~~~~~ipvia~GG-I~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 177 PNLELLKNVCAATDRPVVASGG-VSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp CCHHHHHHHHHTCSSCEEEESC-CCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEECC-CCCHHHHHHHHhhccCCCceeeee
Confidence 4889999999999999988763 67889999998873 46776653
No 291
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=22.92 E-value=2.8e+02 Score=28.54 Aligned_cols=91 Identities=14% Similarity=0.255 Sum_probs=55.3
Q ss_pred CHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCccc---------HHHHHHHHHHHHH----cCCc
Q 012041 342 DWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGT---------VTESIQAALDSKS----AGWG 408 (472)
Q Consensus 342 D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GG---------itea~~ia~~A~a----~g~~ 408 (472)
+++..++|++.+++||+.-.. .++++++.+.+.+ +|+|.+.- . || +.-..++.+.... .+++
T Consensus 331 ~~~~i~~lr~~~~~PvivKgv--~~~e~A~~a~~aG-ad~I~vs~-h-gG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ip 405 (511)
T 1kbi_A 331 TWKDIEELKKKTKLPIVIKGV--QRTEDVIKAAEIG-VSGVVLSN-H-GGRQLDFSRAPIEVLAETMPILEQRNLKDKLE 405 (511)
T ss_dssp CHHHHHHHHHHCSSCEEEEEE--CSHHHHHHHHHTT-CSEEEECC-T-TTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBE
T ss_pred HHHHHHHHHHHhCCcEEEEeC--CCHHHHHHHHHcC-CCEEEEcC-C-CCccCCCCCchHHHHHHHHHHHHhhccCCCcE
Confidence 577799999999999987763 4578888877766 78888732 2 22 2223333333321 2678
Q ss_pred EEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 409 VMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 409 ~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
++..+ ...++....--| ++++..+.+|-+
T Consensus 406 Via~G-GI~~g~Dv~kaL--alGAdaV~iGr~ 434 (511)
T 1kbi_A 406 VFVDG-GVRRGTDVLKAL--CLGAKGVGLGRP 434 (511)
T ss_dssp EEEES-SCCSHHHHHHHH--HHTCSEEEECHH
T ss_pred EEEEC-CCCCHHHHHHHH--HcCCCEEEECHH
Confidence 76544 234444443444 456777776654
No 292
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=22.30 E-value=3.5e+02 Score=25.31 Aligned_cols=97 Identities=11% Similarity=0.007 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHH-hhCCeeEEeCCCCcCCHHHHHHHHhhcCC---eEEeCCccccCHHHHHHHHHc-CCCCEEEecc--C
Q 012041 315 AQSLGDLYKEFV-RDFPIVSIEDPFDQDDWSSWASLQSSVDI---QLVGDDLLVTNPKRIAEAIQK-KSCNGLLLKV--N 387 (472)
Q Consensus 315 ~~eai~~~~~~l-~~~~l~~iEdP~~~~D~~~~~~L~~~~~~---pI~~dE~~~~~~~~~~~~i~~-~a~d~i~ik~--~ 387 (472)
..+++....+.+ ++-+-..+.+|..... .+..+.+..+. .+-.++....+++++++.++. ....++.+-. +
T Consensus 80 ~t~a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~n 157 (386)
T 2dr1_A 80 GTGIMEASIRNGVSKGGKVLVTIIGAFGK--RYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNET 157 (386)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEET
T ss_pred hHHHHHHHHHHhhcCCCeEEEEcCCchhH--HHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecC
Confidence 456665544443 3344677888864321 15555555552 333344333568999988863 3456666553 3
Q ss_pred CcccHHHHHHHHHHHHHcCCcEEecC
Q 012041 388 QIGTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 388 k~GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
-.|.+.+..+++++|+++|+.+++-.
T Consensus 158 ptG~~~~l~~i~~l~~~~~~~li~D~ 183 (386)
T 2dr1_A 158 STGVLNPLPELAKVAKEHDKLVFVDA 183 (386)
T ss_dssp TTTEECCHHHHHHHHHHTTCEEEEEC
T ss_pred CcchhCCHHHHHHHHHHcCCeEEEEc
Confidence 35778889999999999999887644
No 293
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=22.24 E-value=3.6e+02 Score=27.86 Aligned_cols=138 Identities=12% Similarity=0.191 Sum_probs=82.7
Q ss_pred ccCHHHHHHHHHHHHhhCCeeEEeCCCC--cCCHHHHHHHHhhcC--CeEEeC-CccccCHHHHHHHHHcCCCCEEEecc
Q 012041 312 VLSAQSLGDLYKEFVRDFPIVSIEDPFD--QDDWSSWASLQSSVD--IQLVGD-DLLVTNPKRIAEAIQKKSCNGLLLKV 386 (472)
Q Consensus 312 ~~s~~eai~~~~~~l~~~~l~~iEdP~~--~~D~~~~~~L~~~~~--~pI~~d-E~~~~~~~~~~~~i~~~a~d~i~ik~ 386 (472)
.+|.++.-+. .++.-+.++.||=-||- ++|+...+++-+..+ ++|++- |. ....+.+...++ ++|.+.+--
T Consensus 213 ~lTekD~~dl-~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~-~eav~nldeIl~--~sDGIMVAR 288 (520)
T 3khd_A 213 IISEKDKNDI-LNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIEN-IEGIIHFDKILA--ESDGIMIAR 288 (520)
T ss_dssp SSCHHHHHHH-HHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECS-HHHHHTHHHHHH--HSSCEEECH
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECC-HHHHHhHHHHHH--hCCcEEEcc
Confidence 3566554433 13334567888888885 467777766655443 666543 21 122334444454 369998733
Q ss_pred CCcc-------cHHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHHhh--cCCCccc-----CCCCCchh
Q 012041 387 NQIG-------TVTESIQAALDSKSAGWGVMVSHRSGETED-------NFIADLSVGL--ASGQIKT-----GAPCRSER 445 (472)
Q Consensus 387 ~k~G-------Gitea~~ia~~A~a~g~~~~v~~~~~Et~~-------s~~a~lAva~--~~~~i~~-----g~~~~~e~ 445 (472)
+..| -..--++++..|+++|.++++..++.||.+ +=..|+|-|. ++..+.+ -+-.+-|-
T Consensus 289 GDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~yPvea 368 (520)
T 3khd_A 289 GDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEA 368 (520)
T ss_dssp HHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHH
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCcCHHHH
Confidence 2221 123346789999999999998888888853 2367777775 7776654 33345566
Q ss_pred HHHhhHHH
Q 012041 446 LAKYNQLL 453 (472)
Q Consensus 446 ~~k~n~ll 453 (472)
+.-.++..
T Consensus 369 V~~M~~I~ 376 (520)
T 3khd_A 369 VTIMSKIC 376 (520)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666644
No 294
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=22.22 E-value=85 Score=28.52 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=27.2
Q ss_pred HHHHHHHHHHcCCcEEecCCCC------CChhhHHHHHHHhhcCCCcccCCCCCchhH
Q 012041 395 SIQAALDSKSAGWGVMVSHRSG------ETEDNFIADLSVGLASGQIKTGAPCRSERL 446 (472)
Q Consensus 395 a~~ia~~A~a~g~~~~v~~~~~------Et~~s~~a~lAva~~~~~i~~g~~~~~e~~ 446 (472)
..+.+..+++.|...++.|... ......+..+.-.+..+.+-.|+....+.+
T Consensus 154 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~ 211 (252)
T 1ka9_F 154 AVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHF 211 (252)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHH
Confidence 3455566666676654444211 112344555555556666667777544444
No 295
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.18 E-value=3e+02 Score=21.89 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCC-HHHHHHHHhhcC-CeE--EeCCccccCHHHHHHHHHcCCCCEEEeccCCc
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDD-WSSWASLQSSVD-IQL--VGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQI 389 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D-~~~~~~L~~~~~-~pI--~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~ 389 (472)
+..++++.+.+ ..+++..+.--++..+ ++-.++|++..+ +|| +.+.. +.....+.++.+.++.+..|+...
T Consensus 39 ~~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~---~~~~~~~~~~~g~~~~~l~kP~~~ 113 (154)
T 2rjn_A 39 SPLDALEALKG--TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA---DAQATIDAVNRGKISRFLLKPWED 113 (154)
T ss_dssp CHHHHHHHHTT--SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG---GHHHHHHHHHTTCCSEEEESSCCH
T ss_pred CHHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC---CHHHHHHHHhccchheeeeCCCCH
Confidence 45677655332 3477888887776543 566777877653 554 44432 356777788887677888888765
Q ss_pred ccHHHHHH
Q 012041 390 GTVTESIQ 397 (472)
Q Consensus 390 GGitea~~ 397 (472)
.-+...++
T Consensus 114 ~~L~~~i~ 121 (154)
T 2rjn_A 114 EDVFKVVE 121 (154)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544443
No 296
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=22.09 E-value=4.1e+02 Score=26.73 Aligned_cols=92 Identities=9% Similarity=0.162 Sum_probs=57.2
Q ss_pred HHHHHHHHhhc-CCeEEeCCccccCHHHHHHHHHcCCCCEEEeccC-------------CcccHHHHHHHHHHHHHcCCc
Q 012041 343 WSSWASLQSSV-DIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN-------------QIGTVTESIQAALDSKSAGWG 408 (472)
Q Consensus 343 ~~~~~~L~~~~-~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~-------------k~GGitea~~ia~~A~a~g~~ 408 (472)
++..+++++.+ ++|++++.. .+.++++.+++.+ +|.+.+-.+ ....+....+++..+...+++
T Consensus 262 ~~~i~~l~~~~p~~pvi~G~v--~t~~~a~~~~~~G-ad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ip 338 (491)
T 1zfj_A 262 LRKIAEIRAHFPNRTLIAGNI--ATAEGARALYDAG-VDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKT 338 (491)
T ss_dssp HHHHHHHHHHCSSSCEEEEEE--CSHHHHHHHHHTT-CSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHCCCCcEeCCCc--cCHHHHHHHHHcC-CCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCC
Confidence 45677888888 699988763 4678888888766 788766321 122345556677777778999
Q ss_pred EEecCCCCCChhhHHHHHHHhhcCCCcccCCC
Q 012041 409 VMVSHRSGETEDNFIADLSVGLASGQIKTGAP 440 (472)
Q Consensus 409 ~~v~~~~~Et~~s~~a~lAva~~~~~i~~g~~ 440 (472)
++.+... .+.....- ++++++..+..|.+
T Consensus 339 via~GGi-~~~~di~k--al~~GA~~v~vG~~ 367 (491)
T 1zfj_A 339 IIADGGI-KYSGDIVK--ALAAGGNAVMLGSM 367 (491)
T ss_dssp EEEESCC-CSHHHHHH--HHHTTCSEEEESTT
T ss_pred EEeeCCC-CCHHHHHH--HHHcCCcceeeCHH
Confidence 8765532 23222222 33445666666655
No 297
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=21.82 E-value=2.5e+02 Score=26.88 Aligned_cols=86 Identities=14% Similarity=0.078 Sum_probs=48.5
Q ss_pred HHHHHHHhhcC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 012041 344 SSWASLQSSVD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNF 422 (472)
Q Consensus 344 ~~~~~L~~~~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~~Et~~s~ 422 (472)
+.++++++..+ .+|.- | +.+.+++.++++.+ +|+|++|-.... ++++++++... .+.+.++.+.... .
T Consensus 196 ~Av~~ar~~~p~~kIeV-E--v~tl~e~~eAl~aG-aDiImLDn~s~~---~l~~av~~~~~-~v~leaSGGIt~~---~ 264 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-E--CDNISQVEESLSNN-VDMILLDNMSIS---EIKKAVDIVNG-KSVLEVSGCVNIR---N 264 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-E--ESSHHHHHHHHHTT-CSEEEEESCCHH---HHHHHHHHHTT-SSEEEEESSCCTT---T
T ss_pred HHHHHHHHhCCCCCEEE-E--ECCHHHHHHHHHcC-CCEEEECCCCHH---HHHHHHHhhcC-ceEEEEECCCCHH---H
Confidence 34455555443 44432 2 45678888888886 799999987554 44444444432 4555554433222 2
Q ss_pred HHHHHHhhcCCCcccCCCC
Q 012041 423 IADLSVGLASGQIKTGAPC 441 (472)
Q Consensus 423 ~a~lAva~~~~~i~~g~~~ 441 (472)
+..+| ..+..++..|.+.
T Consensus 265 i~~~A-~tGVD~IsvGalt 282 (300)
T 3l0g_A 265 VRNIA-LTGVDYISIGCIT 282 (300)
T ss_dssp HHHHH-TTTCSEEECGGGT
T ss_pred HHHHH-HcCCCEEEeCccc
Confidence 33333 3566777777653
No 298
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=21.80 E-value=4e+02 Score=23.25 Aligned_cols=113 Identities=16% Similarity=0.193 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcCCeEEeC--------Cccc-cCHHHHHHHHHcCCCCEEEe
Q 012041 314 SAQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGD--------DLLV-TNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~~pI~~d--------E~~~-~~~~~~~~~i~~~a~d~i~i 384 (472)
+.+...++ .+.+++.+..||+- +..+..+++++.+++|+.+. ...+ .+.+++..+++.+ +|.+.+
T Consensus 21 ~~~~~~~~-a~~~~~~Ga~~i~~----~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~G-ad~v~l 94 (223)
T 1y0e_A 21 SSFIMSKM-ALAAYEGGAVGIRA----NTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQ-CEVIAL 94 (223)
T ss_dssp CHHHHHHH-HHHHHHHTCSEEEE----ESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHT-CSEEEE
T ss_pred CCccHHHH-HHHHHHCCCeeecc----CCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCC-CCEEEE
Confidence 34445544 44466667777652 46778899999999998641 1111 2346677777766 588877
Q ss_pred ccCCcccH-HHHHHHHHHHHHc--CCcEEecCCCCCChhhHHHHHHHhhcCCCccc
Q 012041 385 KVNQIGTV-TESIQAALDSKSA--GWGVMVSHRSGETEDNFIADLSVGLASGQIKT 437 (472)
Q Consensus 385 k~~k~GGi-tea~~ia~~A~a~--g~~~~v~~~~~Et~~s~~a~lAva~~~~~i~~ 437 (472)
.....-.. ....++.+.+++. |+.++++.. +... +.-+...++.++..
T Consensus 95 ~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~---t~~e--~~~~~~~G~d~i~~ 145 (223)
T 1y0e_A 95 DATLQQRPKETLDELVSYIRTHAPNVEIMADIA---TVEE--AKNAARLGFDYIGT 145 (223)
T ss_dssp ECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS---SHHH--HHHHHHTTCSEEEC
T ss_pred eeecccCcccCHHHHHHHHHHhCCCceEEecCC---CHHH--HHHHHHcCCCEEEe
Confidence 65432111 1234566666666 777765442 2111 22244456666644
No 299
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=21.42 E-value=1.5e+02 Score=27.59 Aligned_cols=96 Identities=11% Similarity=-0.042 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhhCCeeEEeCCCCcCCHHHHHHHHhhcC---CeEEeCCccccCHHHHHHHHHcCCCCEEEeccC--Cc
Q 012041 315 AQSLGDLYKEFVRDFPIVSIEDPFDQDDWSSWASLQSSVD---IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVN--QI 389 (472)
Q Consensus 315 ~~eai~~~~~~l~~~~l~~iEdP~~~~D~~~~~~L~~~~~---~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~--k~ 389 (472)
..+++....+.+-+ +-..+.+|-.+.. .+..+.+..+ +.+-.|+....+++++++.++.....++.+-.. -.
T Consensus 61 ~t~a~~~~~~~~~~-d~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 137 (353)
T 2yrr_A 61 GSLGMEAGLANLDR-GPVLVLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETST 137 (353)
T ss_dssp HHHHHHHHHHTCSC-CCEEEEECSHHHH--HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred cHHHHHHHHHHhcC-CcEEEEcCCCchH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCc
Confidence 45666554444433 4344444432211 2444444455 233334433346889988887633455554332 35
Q ss_pred ccHHHHHHHHHHHHHcCCcEEecC
Q 012041 390 GTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 390 GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
|.+.+..+++++|+++|+.+++-.
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~ 161 (353)
T 2yrr_A 138 GVLNPAEAIGALAKEAGALFFLDA 161 (353)
T ss_dssp TEECCHHHHHHHHHHHTCEEEEEC
T ss_pred ceecCHHHHHHHHHHcCCeEEEEc
Confidence 777788899999999999887644
No 300
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=21.18 E-value=2.1e+02 Score=27.26 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=46.6
Q ss_pred HHHHHHHcCCCCEEEeccCCcc-----cHHHHHHHHHHHHHcCCcEEecCCC-----CCCh-hhHHHHHHHhhcCCCccc
Q 012041 369 RIAEAIQKKSCNGLLLKVNQIG-----TVTESIQAALDSKSAGWGVMVSHRS-----GETE-DNFIADLSVGLASGQIKT 437 (472)
Q Consensus 369 ~~~~~i~~~a~d~i~ik~~k~G-----Gitea~~ia~~A~a~g~~~~v~~~~-----~Et~-~s~~a~lAva~~~~~i~~ 437 (472)
.+++.++.+ +|.+.+.+..-. -+.++.++.+.|+.+|+++++-... .+.. ...++++|..+++.++|.
T Consensus 130 ~ve~Av~~G-AdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt 208 (295)
T 3glc_A 130 SMDDAVRLN-SCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKT 208 (295)
T ss_dssp CHHHHHHTT-CSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHCC-CCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 344555554 677776554222 3556778888999999998772211 1112 245789999999999998
Q ss_pred CCC
Q 012041 438 GAP 440 (472)
Q Consensus 438 g~~ 440 (472)
..+
T Consensus 209 ~~t 211 (295)
T 3glc_A 209 YYV 211 (295)
T ss_dssp ECC
T ss_pred CCC
Confidence 754
No 301
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=21.08 E-value=1e+02 Score=27.96 Aligned_cols=53 Identities=11% Similarity=0.078 Sum_probs=27.2
Q ss_pred HHHHHHHHHHcCCcEEecCCCC------CChhhHHHHHHHhhcCCCcccCCCCCchhHH
Q 012041 395 SIQAALDSKSAGWGVMVSHRSG------ETEDNFIADLSVGLASGQIKTGAPCRSERLA 447 (472)
Q Consensus 395 a~~ia~~A~a~g~~~~v~~~~~------Et~~s~~a~lAva~~~~~i~~g~~~~~e~~~ 447 (472)
..+.+..++..|...++.|... .........+.-.+..+.+--|+....+.+.
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~ 211 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFL 211 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 4455666667777654444211 1123344455444455666667775445443
No 302
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=20.77 E-value=6.2e+02 Score=25.03 Aligned_cols=62 Identities=13% Similarity=0.086 Sum_probs=38.5
Q ss_pred CCeeEEe-CCCCcCCHHHHHHHHhhcCCeEEeCCccccCH----HHHHHHHHcCCCCEEEeccCCccc
Q 012041 329 FPIVSIE-DPFDQDDWSSWASLQSSVDIQLVGDDLLVTNP----KRIAEAIQKKSCNGLLLKVNQIGT 391 (472)
Q Consensus 329 ~~l~~iE-dP~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~----~~~~~~i~~~a~d~i~ik~~k~GG 391 (472)
-+..|+- -|..--+..+|.++.++-++||+||+. .+.. ..+.+++..+...+..+--...||
T Consensus 187 aG~~fVN~~P~~ia~~P~~~ela~~~gvpi~GDD~-ktGqT~lks~La~~l~~Rglkv~~~~q~NilG 253 (394)
T 1vjp_A 187 GGAAFVNVIPTFIANDPAFVELAKENNLVVFGDDG-ATGATPFTADVLSHLAQRNRYVKDVAQFNIGG 253 (394)
T ss_dssp TCEEEEECSSSCSTTCHHHHHHHHHTTEEEECSSB-SCSHHHHHHHHHHHHHHTTCEEEEEEEEEEEC
T ss_pred CCcceEecCCccccCCHHHHHHHHHcCCCEEcccc-CCCCCchHHHHHHHHHHcCCceeEEEEEeccc
Confidence 4666663 354334558999999999999999994 5542 334445555555554443333344
No 303
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=20.65 E-value=1.6e+02 Score=27.37 Aligned_cols=46 Identities=9% Similarity=0.043 Sum_probs=35.9
Q ss_pred CCCcCCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcCCCCEEEe
Q 012041 337 PFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLL 384 (472)
Q Consensus 337 P~~~~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~a~d~i~i 384 (472)
|+.++..+-.++|++.+++||+.|=- +++++++.+++..+ +|++.+
T Consensus 188 ~~~~~~~~~i~~lr~~~~~pi~vggG-I~t~e~~~~~~~ag-AD~vVV 233 (268)
T 1qop_A 188 RGALPLHHLIEKLKEYHAAPALQGFG-ISSPEQVSAAVRAG-AAGAIS 233 (268)
T ss_dssp CC--CCHHHHHHHHHTTCCCEEEESS-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCCchHHHHHHHHHhccCCcEEEECC-CCCHHHHHHHHHcC-CCEEEE
Confidence 67777788899999988899877653 67799999977776 788876
No 304
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=20.46 E-value=1e+02 Score=30.15 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhhC-CeeEEeCCCCcCCHHHHHHHHhhcC-----CeEE-eCCccccCHHHHHHHHHcCCCCEEEe-cc
Q 012041 315 AQSLGDLYKEFVRDF-PIVSIEDPFDQDDWSSWASLQSSVD-----IQLV-GDDLLVTNPKRIAEAIQKKSCNGLLL-KV 386 (472)
Q Consensus 315 ~~eai~~~~~~l~~~-~l~~iEdP~~~~D~~~~~~L~~~~~-----~pI~-~dE~~~~~~~~~~~~i~~~a~d~i~i-k~ 386 (472)
..+++....+.+-+. +-..+++|... ++.......+ +|+. .+..+..+++++++.++.....++.+ -+
T Consensus 128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p 203 (421)
T 3l8a_A 128 VVPAISIALQAFSEKGDAVLINSPVYY----PFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSP 203 (421)
T ss_dssp HHHHHHHHHHHHSCTEEEEEEEESCCH----HHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCcH----HHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCC
Confidence 456666555555333 35667888764 3444444444 3332 23323347899999887433444443 33
Q ss_pred CC-cccH---HHHHHHHHHHHHcCCcEEecC
Q 012041 387 NQ-IGTV---TESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 387 ~k-~GGi---tea~~ia~~A~a~g~~~~v~~ 413 (472)
.. .|-+ .+..+++++|+++|+.+++-.
T Consensus 204 ~nptG~~~~~~~l~~l~~l~~~~~~~li~De 234 (421)
T 3l8a_A 204 HNPGGRVWDNDDLIKIAELCKKHGVILVSDE 234 (421)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 33 3444 589999999999999987643
No 305
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=20.38 E-value=5.5e+02 Score=24.22 Aligned_cols=44 Identities=11% Similarity=-0.059 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHHhhCC--eeEEeCCCCcCCHHHHHHHHhhcC--CeEEeC
Q 012041 314 SAQSLGDLYKEFVRDFP--IVSIEDPFDQDDWSSWASLQSSVD--IQLVGD 360 (472)
Q Consensus 314 s~~eai~~~~~~l~~~~--l~~iEdP~~~~D~~~~~~L~~~~~--~pI~~d 360 (472)
..+++++. ++.+++.+ ..|+|-+++ |.+..+++++.++ +|++..
T Consensus 168 g~~~ai~R-a~ay~eAGAd~i~~e~~~~--~~~~~~~i~~~~~~~~P~i~~ 215 (295)
T 1s2w_A 168 GLDEALKR-AEAYRNAGADAILMHSKKA--DPSDIEAFMKAWNNQGPVVIV 215 (295)
T ss_dssp CHHHHHHH-HHHHHHTTCSEEEECCCSS--SSHHHHHHHHHHTTCSCEEEC
T ss_pred cHHHHHHH-HHHHHHcCCCEEEEcCCCC--CHHHHHHHHHHcCCCCCEEEe
Confidence 36889988 44566655 889986555 4567889999887 888654
No 306
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=20.33 E-value=88 Score=28.26 Aligned_cols=43 Identities=9% Similarity=0.173 Sum_probs=34.6
Q ss_pred CCHHHHHHHHhhcCCeEEeCCccccCHHHHHHHHHcC--CCCEEEe
Q 012041 341 DDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKK--SCNGLLL 384 (472)
Q Consensus 341 ~D~~~~~~L~~~~~~pI~~dE~~~~~~~~~~~~i~~~--a~d~i~i 384 (472)
-|++.++++++.+++||+++-- +++++++.++++.. .+|.+.+
T Consensus 180 ~~~~~~~~l~~~~~ipvia~GG-I~~~~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 180 PNLDLLAGVADRTDAPVIASGG-VSSLDDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp CCHHHHHHHHTTCSSCEEEESC-CCSHHHHHHHHTTGGGTEEEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEECC-CCCHHHHHHHHhhccCCCCEEEE
Confidence 4899999999988899987663 67889999998772 4677765
No 307
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=20.22 E-value=1.7e+02 Score=25.84 Aligned_cols=66 Identities=17% Similarity=0.138 Sum_probs=42.8
Q ss_pred HHHHHHHHhhcCCeEEeCCccccCHH-HHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecC
Q 012041 343 WSSWASLQSSVDIQLVGDDLLVTNPK-RIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 343 ~~~~~~L~~~~~~pI~~dE~~~~~~~-~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
++..++|++.++.|+..+ ..++++. .++.+.+. .+|.+++.....- ...+.++.++.+|..+++..
T Consensus 50 ~~~i~~i~~~~~~~~~v~-l~v~d~~~~i~~~~~~-gad~v~vh~~~~~---~~~~~~~~~~~~g~~i~~~~ 116 (220)
T 2fli_A 50 ADVVASMRKHSKLVFDCH-LMVVDPERYVEAFAQA-GADIMTIHTESTR---HIHGALQKIKAAGMKAGVVI 116 (220)
T ss_dssp HHHHHHHHTTCCSEEEEE-EESSSGGGGHHHHHHH-TCSEEEEEGGGCS---CHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEE-EeecCHHHHHHHHHHc-CCCEEEEccCccc---cHHHHHHHHHHcCCcEEEEE
Confidence 788889998877676665 2344443 34444444 5899999766543 34456666777888876655
No 308
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=20.22 E-value=1.4e+02 Score=27.95 Aligned_cols=96 Identities=4% Similarity=-0.012 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHhh-CC-eeEEeCCCCcCCHHHHHHHHhhcC---CeEEeCCccccCHHHHHHHHHcC-CCCEEEeccCC
Q 012041 315 AQSLGDLYKEFVRD-FP-IVSIEDPFDQDDWSSWASLQSSVD---IQLVGDDLLVTNPKRIAEAIQKK-SCNGLLLKVNQ 388 (472)
Q Consensus 315 ~~eai~~~~~~l~~-~~-l~~iEdP~~~~D~~~~~~L~~~~~---~pI~~dE~~~~~~~~~~~~i~~~-a~d~i~ik~~k 388 (472)
..+++....+.+-+ -+ +...+.|.... .+..+....+ +.+-.++....+++++++.++.. ....+.+-...
T Consensus 65 ~t~a~~~~~~~~~~~gd~vi~~~~~~~~~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 141 (366)
T 1m32_A 65 GSYAVEAVLGSALGPQDKVLIVSNGAYGA---RMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSE 141 (366)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESSHHHH---HHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred hHHHHHHHHHHhcCCCCeEEEEeCCCccH---HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEeccc
Confidence 45666655554422 23 44444444322 2333333444 22223443335689999888764 34555433322
Q ss_pred --cccHHHHHHHHHHHHHcCCcEEecC
Q 012041 389 --IGTVTESIQAALDSKSAGWGVMVSH 413 (472)
Q Consensus 389 --~GGitea~~ia~~A~a~g~~~~v~~ 413 (472)
.|.+.+..+++++|+++|+.+++-.
T Consensus 142 nptG~~~~l~~i~~l~~~~~~~li~De 168 (366)
T 1m32_A 142 TTTGMLNPIDEVGALAHRYGKTYIVDA 168 (366)
T ss_dssp TTTTEECCHHHHHHHHHHHTCEEEEEC
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEEC
Confidence 4777788899999999999887643
No 309
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=20.07 E-value=1.3e+02 Score=30.38 Aligned_cols=96 Identities=14% Similarity=0.031 Sum_probs=51.4
Q ss_pred cccCHHHHHHHHH-------cCCCCE-------EEeccCCcccHH-----HHHHHHHHHHHcCCc-EEe-cCC-CCCChh
Q 012041 363 LVTNPKRIAEAIQ-------KKSCNG-------LLLKVNQIGTVT-----ESIQAALDSKSAGWG-VMV-SHR-SGETED 420 (472)
Q Consensus 363 ~~~~~~~~~~~i~-------~~a~d~-------i~ik~~k~GGit-----ea~~ia~~A~a~g~~-~~v-~~~-~~Et~~ 420 (472)
.+|+|++++++++ .-.+|. +.+-++..=|.. +.-++.++.+.-.++ +++ .|+ ++-+..
T Consensus 186 ~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~P~LVle~HGgSg~~~e 265 (420)
T 2fiq_A 186 HITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIENTRMVYEAHSTDYQTRT 265 (420)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTTSSCEEEESCCTTCCHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCCCCEEEecCCCCCCCHH
Confidence 3689999999998 777787 554443321111 222334444444555 544 363 333322
Q ss_pred hHHHHHHHhhcCCCcccCCCCCchhHHHhhHHHHHHHHhC
Q 012041 421 NFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELG 460 (472)
Q Consensus 421 s~~a~lAva~~~~~i~~g~~~~~e~~~k~n~ll~i~~~l~ 460 (472)
. ..-++..+..-+|+|.-..-.-...+..|..||.++-
T Consensus 266 ~--l~~~v~~Gi~kiNV~t~l~~a~~~al~~l~~ie~~l~ 303 (420)
T 2fiq_A 266 A--YWELVRDHFAILKVGPALTFALREAIFALAQIEQELI 303 (420)
T ss_dssp H--HHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHHHHS
T ss_pred H--HHHHHHcCCCEEEECHHHHHHHHHHHHHHHHhhhhhc
Confidence 2 2333444555666654433333455666888888763
No 310
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=20.03 E-value=1.2e+02 Score=29.05 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=47.0
Q ss_pred HHHHHhh--cC-CeEEeCCccccCHHHHHHHHHcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 012041 346 WASLQSS--VD-IQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRS 415 (472)
Q Consensus 346 ~~~L~~~--~~-~pI~~dE~~~~~~~~~~~~i~~~a~d~i~ik~~k~GGitea~~ia~~A~a~g~~~~v~~~~ 415 (472)
|.+|-+. ++ |-|+.-.. +..+-+..+++.+ .+++.=||.-. .+.++.++++.|+++|+.++++++.
T Consensus 86 ~~ell~~~~iDaV~IatP~~--~H~~~a~~al~aG-khVl~EKPla~-~~~ea~~l~~~a~~~g~~l~vg~~~ 154 (393)
T 4fb5_A 86 WRALIADPEVDVVSVTTPNQ--FHAEMAIAALEAG-KHVWCEKPMAP-AYADAERMLATAERSGKVAALGYNY 154 (393)
T ss_dssp HHHHHHCTTCCEEEECSCGG--GHHHHHHHHHHTT-CEEEECSCSCS-SHHHHHHHHHHHHHSSSCEEECCGG
T ss_pred HHHHhcCCCCcEEEECCChH--HHHHHHHHHHhcC-CeEEEccCCcc-cHHHHHHhhhhHHhcCCcccccccc
Confidence 4444333 44 45555543 2456667777765 67887777655 6999999999999999999999954
Done!