Query 012042
Match_columns 472
No_of_seqs 465 out of 2861
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 08:00:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012042.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012042hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2268 Serine/threonine prote 100.0 1.4E-77 3E-82 591.1 17.1 454 1-471 1-464 (465)
2 COG0478 RIO-like serine/threon 100.0 1.1E-61 2.4E-66 470.3 20.6 278 1-278 1-279 (304)
3 KOG0581 Mitogen-activated prot 100.0 5.4E-32 1.2E-36 270.9 14.5 215 96-347 84-334 (364)
4 cd05146 RIO3_euk RIO kinase fa 100.0 1E-31 2.2E-36 254.5 14.4 175 95-273 1-196 (197)
5 KOG0615 Serine/threonine prote 100.0 1.1E-31 2.4E-36 271.1 14.9 229 92-347 173-436 (475)
6 KOG0595 Serine/threonine-prote 100.0 1.3E-31 2.9E-36 270.5 13.5 221 93-345 12-265 (429)
7 KOG0575 Polo-like serine/threo 100.0 1.3E-30 2.9E-35 273.9 15.9 229 91-349 18-270 (592)
8 KOG0592 3-phosphoinositide-dep 100.0 8.8E-31 1.9E-35 271.9 13.7 232 93-347 75-337 (604)
9 cd05144 RIO2_C RIO kinase fami 100.0 8.7E-30 1.9E-34 240.7 18.4 197 77-273 1-197 (198)
10 KOG0591 NIMA (never in mitosis 100.0 2.6E-31 5.6E-36 257.6 6.0 216 93-342 21-275 (375)
11 COG1718 RIO1 Serine/threonine 100.0 1.5E-29 3.2E-34 244.2 16.8 197 78-279 35-243 (268)
12 KOG0598 Ribosomal protein S6 k 100.0 5.1E-30 1.1E-34 256.6 13.7 227 93-348 27-277 (357)
13 PF01163 RIO1: RIO1 family; I 100.0 9.8E-30 2.1E-34 239.7 12.7 171 106-277 1-182 (188)
14 KOG0593 Predicted protein kina 100.0 7E-30 1.5E-34 249.7 12.0 228 93-351 4-287 (396)
15 cd05147 RIO1_euk RIO kinase fa 100.0 1.9E-29 4.2E-34 238.2 14.7 174 96-273 2-189 (190)
16 KOG0583 Serine/threonine prote 100.0 3.7E-29 8E-34 259.0 15.4 228 92-347 18-274 (370)
17 smart00090 RIO RIO-like kinase 100.0 8.6E-29 1.9E-33 241.6 15.6 206 68-278 5-224 (237)
18 KOG0198 MEKK and related serin 100.0 1.1E-28 2.4E-33 248.5 15.3 222 93-347 19-275 (313)
19 PTZ00263 protein kinase A cata 100.0 2.2E-28 4.8E-33 247.9 17.6 217 93-342 20-260 (329)
20 KOG2270 Serine/threonine prote 100.0 2.2E-28 4.7E-33 245.9 17.1 208 80-307 133-354 (520)
21 cd05571 STKc_PKB Catalytic dom 100.0 1.7E-28 3.8E-33 247.9 16.4 218 97-342 1-240 (323)
22 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.9E-28 8.4E-33 245.9 18.3 223 93-348 3-257 (333)
23 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.4E-28 5.3E-33 247.4 15.0 224 93-346 9-328 (338)
24 cd05612 STKc_PRKX_like Catalyt 100.0 2.3E-28 5.1E-33 243.0 14.4 216 93-341 3-242 (291)
25 cd05585 STKc_YPK1_like Catalyt 100.0 4.3E-28 9.2E-33 243.7 16.3 214 99-342 1-238 (312)
26 cd05631 STKc_GRK4 Catalytic do 100.0 5.9E-28 1.3E-32 239.1 17.0 221 93-344 2-252 (285)
27 KOG0201 Serine/threonine prote 100.0 6.2E-29 1.4E-33 252.9 9.2 224 91-346 13-261 (467)
28 cd05587 STKc_cPKC Catalytic do 100.0 5.8E-28 1.3E-32 243.9 16.1 223 93-344 2-248 (324)
29 KOG0578 p21-activated serine/t 100.0 2.4E-28 5.3E-33 255.2 13.3 224 93-349 275-524 (550)
30 cd07848 STKc_CDKL5 Catalytic d 100.0 5.3E-28 1.1E-32 238.3 14.7 224 93-346 3-282 (287)
31 KOG0589 Serine/threonine prote 100.0 1.5E-28 3.2E-33 254.5 11.0 221 93-347 6-257 (426)
32 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-27 2.3E-32 243.0 16.7 215 97-341 1-239 (328)
33 cd05145 RIO1_like RIO kinase f 100.0 9.2E-28 2E-32 226.0 15.0 176 95-274 1-190 (190)
34 cd05595 STKc_PKB_beta Catalyti 100.0 9.1E-28 2E-32 242.9 15.9 216 97-342 1-240 (323)
35 PLN00034 mitogen-activated pro 100.0 6E-28 1.3E-32 246.9 14.7 222 95-348 78-328 (353)
36 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.1E-28 1.5E-32 242.9 14.9 230 93-349 2-291 (338)
37 KOG0582 Ste20-like serine/thre 100.0 5E-28 1.1E-32 246.6 13.7 230 92-347 27-292 (516)
38 cd05582 STKc_RSK_N N-terminal 100.0 1E-27 2.2E-32 241.3 15.9 218 97-345 2-246 (318)
39 cd05594 STKc_PKB_alpha Catalyt 100.0 1.3E-27 2.9E-32 241.5 16.3 215 97-341 1-240 (325)
40 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.7E-28 1.7E-32 238.7 14.2 221 93-346 7-283 (288)
41 cd05589 STKc_PKN Catalytic dom 99.9 1.6E-27 3.5E-32 240.7 16.2 223 93-345 1-249 (324)
42 cd05575 STKc_SGK Catalytic dom 99.9 1.7E-27 3.7E-32 240.5 16.3 220 97-346 1-245 (323)
43 cd05614 STKc_MSK2_N N-terminal 99.9 1.7E-27 3.8E-32 240.8 16.4 223 93-343 2-257 (332)
44 cd05616 STKc_cPKC_beta Catalyt 99.9 2.2E-27 4.7E-32 239.7 17.1 223 93-344 2-248 (323)
45 cd05573 STKc_ROCK_NDR_like Cat 99.9 1.1E-27 2.4E-32 243.2 14.8 234 93-348 3-285 (350)
46 cd05598 STKc_LATS Catalytic do 99.9 4.2E-27 9E-32 242.5 19.2 235 93-349 3-302 (376)
47 cd07869 STKc_PFTAIRE1 Catalyti 99.9 1.3E-27 2.8E-32 238.5 14.8 223 93-348 7-288 (303)
48 cd05599 STKc_NDR_like Catalyti 99.9 1.5E-27 3.2E-32 244.4 15.6 232 93-347 3-295 (364)
49 KOG0585 Ca2+/calmodulin-depend 99.9 1.9E-27 4.1E-32 243.8 16.2 234 93-343 99-367 (576)
50 cd05607 STKc_GRK7 Catalytic do 99.9 2.6E-27 5.7E-32 233.5 16.5 219 99-348 1-250 (277)
51 KOG0192 Tyrosine kinase specif 99.9 2.6E-27 5.6E-32 244.1 16.8 219 96-346 46-297 (362)
52 PTZ00267 NIMA-related protein 99.9 2.1E-27 4.6E-32 253.6 16.5 225 92-347 68-322 (478)
53 cd06649 PKc_MEK2 Catalytic dom 99.9 2.8E-27 6E-32 239.9 16.5 223 93-349 7-302 (331)
54 cd05096 PTKc_DDR1 Catalytic do 99.9 3.1E-27 6.8E-32 235.6 16.5 221 93-344 7-297 (304)
55 KOG0661 MAPK related serine/th 99.9 1.9E-28 4.2E-33 251.2 7.8 219 93-347 12-290 (538)
56 cd05584 STKc_p70S6K Catalytic 99.9 3.6E-27 7.8E-32 238.3 17.0 219 97-344 2-247 (323)
57 cd05602 STKc_SGK1 Catalytic do 99.9 3.9E-27 8.4E-32 238.1 17.0 220 97-346 1-245 (325)
58 PF00069 Pkinase: Protein kina 99.9 2.2E-27 4.8E-32 229.0 14.6 222 93-345 1-254 (260)
59 PHA03212 serine/threonine kina 99.9 1.5E-27 3.2E-32 248.8 14.3 219 92-349 93-377 (391)
60 cd05615 STKc_cPKC_alpha Cataly 99.9 2.8E-27 6E-32 239.3 15.8 223 94-345 3-249 (323)
61 cd05592 STKc_nPKC_theta_delta 99.9 2.3E-27 5.1E-32 239.2 15.1 219 97-345 1-244 (316)
62 cd07876 STKc_JNK2 Catalytic do 99.9 4.7E-27 1E-31 240.7 16.9 224 93-349 23-316 (359)
63 cd05590 STKc_nPKC_eta Catalyti 99.9 2.8E-27 6.1E-32 239.0 15.0 219 97-345 1-244 (320)
64 PTZ00283 serine/threonine prot 99.9 2.5E-27 5.4E-32 254.4 15.4 229 92-347 33-296 (496)
65 cd05618 STKc_aPKC_iota Catalyt 99.9 4.9E-27 1.1E-31 238.3 16.6 217 97-343 1-251 (329)
66 cd05604 STKc_SGK3 Catalytic do 99.9 4.5E-27 9.8E-32 237.6 15.9 220 97-346 1-245 (325)
67 cd05603 STKc_SGK2 Catalytic do 99.9 6.6E-27 1.4E-31 235.8 17.0 219 97-345 1-244 (321)
68 cd05591 STKc_nPKC_epsilon Cata 99.9 5.2E-27 1.1E-31 236.7 16.2 216 97-342 1-241 (321)
69 KOG0577 Serine/threonine prote 99.9 4.1E-28 8.9E-33 253.1 7.9 215 96-347 31-277 (948)
70 cd05629 STKc_NDR_like_fungal C 99.9 6.9E-27 1.5E-31 241.2 16.8 234 93-348 3-305 (377)
71 cd05588 STKc_aPKC Catalytic do 99.9 7.1E-27 1.5E-31 236.9 16.6 217 97-343 1-251 (329)
72 KOG0600 Cdc2-related protein k 99.9 3.4E-27 7.4E-32 243.5 14.2 228 93-351 119-403 (560)
73 cd05601 STKc_CRIK Catalytic do 99.9 1.2E-26 2.6E-31 234.5 18.0 226 93-348 3-263 (330)
74 cd05608 STKc_GRK1 Catalytic do 99.9 5.7E-27 1.2E-31 231.6 15.1 216 99-344 1-248 (280)
75 PTZ00426 cAMP-dependent protei 99.9 5.1E-27 1.1E-31 239.8 15.3 216 93-341 32-272 (340)
76 cd05625 STKc_LATS1 Catalytic d 99.9 7.9E-27 1.7E-31 241.1 16.9 227 93-341 3-295 (382)
77 cd05620 STKc_nPKC_delta Cataly 99.9 5.3E-27 1.1E-31 236.6 14.7 219 97-345 1-244 (316)
78 cd05626 STKc_LATS2 Catalytic d 99.9 9.6E-27 2.1E-31 240.8 17.0 236 93-349 3-306 (381)
79 cd05617 STKc_aPKC_zeta Catalyt 99.9 1.1E-26 2.5E-31 235.3 17.0 218 97-343 1-249 (327)
80 cd06625 STKc_MEKK3_like Cataly 99.9 1.6E-26 3.5E-31 224.0 17.3 228 93-345 4-257 (263)
81 cd07862 STKc_CDK6 Catalytic do 99.9 7.1E-27 1.5E-31 230.6 14.7 222 93-347 3-286 (290)
82 KOG0616 cAMP-dependent protein 99.9 4.5E-27 9.8E-32 229.5 12.8 214 94-343 47-287 (355)
83 cd05628 STKc_NDR1 Catalytic do 99.9 1E-26 2.2E-31 238.9 16.2 234 93-348 3-293 (363)
84 cd07874 STKc_JNK3 Catalytic do 99.9 8.9E-27 1.9E-31 238.0 15.6 223 93-348 19-311 (355)
85 cd06650 PKc_MEK1 Catalytic dom 99.9 1E-26 2.2E-31 236.4 15.7 221 93-347 7-298 (333)
86 KOG0605 NDR and related serine 99.9 2E-27 4.4E-32 246.8 10.7 227 93-341 143-435 (550)
87 cd07863 STKc_CDK4 Catalytic do 99.9 1.3E-26 2.7E-31 228.4 15.8 221 93-346 2-283 (288)
88 cd05586 STKc_Sck1_like Catalyt 99.9 1.1E-26 2.3E-31 235.1 15.0 217 99-345 1-246 (330)
89 cd07872 STKc_PCTAIRE2 Catalyti 99.9 8.7E-27 1.9E-31 233.2 14.2 224 93-349 8-287 (309)
90 KOG1187 Serine/threonine prote 99.9 2.2E-26 4.7E-31 237.7 17.4 230 78-344 65-344 (361)
91 cd05596 STKc_ROCK Catalytic do 99.9 1.9E-26 4.1E-31 238.2 16.8 227 93-348 45-304 (370)
92 PTZ00036 glycogen synthase kin 99.9 7.9E-27 1.7E-31 246.8 14.2 221 92-349 67-352 (440)
93 cd05627 STKc_NDR2 Catalytic do 99.9 1.6E-26 3.5E-31 237.0 16.0 228 93-342 3-284 (360)
94 KOG0588 Serine/threonine prote 99.9 5.4E-27 1.2E-31 248.2 12.7 223 93-347 14-262 (786)
95 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.8E-26 3.9E-31 224.2 15.5 221 93-345 8-253 (260)
96 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 2E-26 4.4E-31 227.3 15.8 225 92-345 5-276 (284)
97 cd05069 PTKc_Yes Catalytic dom 99.9 2.8E-26 6E-31 223.2 16.4 221 93-345 8-253 (260)
98 cd05570 STKc_PKC Catalytic dom 99.9 1.6E-26 3.4E-31 233.1 15.1 218 97-344 1-243 (318)
99 cd06619 PKc_MKK5 Catalytic dom 99.9 2.7E-26 5.9E-31 226.0 16.5 223 93-349 3-254 (279)
100 cd05104 PTKc_Kit Catalytic dom 99.9 1.6E-26 3.4E-31 239.2 15.4 223 93-346 37-368 (375)
101 cd05619 STKc_nPKC_theta Cataly 99.9 1.3E-26 2.9E-31 233.8 14.5 219 97-345 1-244 (316)
102 cd05072 PTKc_Lyn Catalytic dom 99.9 2.1E-26 4.6E-31 223.5 15.3 219 93-345 8-254 (261)
103 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.4E-26 5.2E-31 223.3 15.4 219 93-345 8-253 (260)
104 cd05068 PTKc_Frk_like Catalyti 99.9 5E-26 1.1E-30 221.3 17.5 219 93-345 8-254 (261)
105 cd05071 PTKc_Src Catalytic dom 99.9 2.5E-26 5.5E-31 224.3 15.4 219 93-345 8-253 (262)
106 cd07875 STKc_JNK1 Catalytic do 99.9 2.5E-26 5.3E-31 235.7 16.0 225 93-348 26-318 (364)
107 KOG0694 Serine/threonine prote 99.9 2.1E-26 4.5E-31 245.0 15.5 225 93-349 370-620 (694)
108 KOG0597 Serine-threonine prote 99.9 5.2E-27 1.1E-31 244.3 10.7 222 94-347 5-250 (808)
109 cd07853 STKc_NLK Catalytic dom 99.9 2E-26 4.4E-31 237.2 15.0 225 93-348 2-288 (372)
110 cd05632 STKc_GRK5 Catalytic do 99.9 5.2E-26 1.1E-30 225.3 17.3 223 94-345 3-253 (285)
111 cd07868 STKc_CDK8 Catalytic do 99.9 4.2E-26 9.1E-31 228.5 16.6 183 95-308 5-214 (317)
112 cd06646 STKc_MAP4K5 Catalytic 99.9 3.6E-26 7.7E-31 222.7 15.5 220 93-345 11-262 (267)
113 KOG0660 Mitogen-activated prot 99.9 9.8E-27 2.1E-31 232.4 11.5 224 96-347 27-309 (359)
114 cd05084 PTKc_Fes Catalytic dom 99.9 4.4E-26 9.6E-31 220.2 15.7 218 97-345 1-246 (252)
115 cd05621 STKc_ROCK2 Catalytic d 99.9 4.1E-26 8.9E-31 235.9 16.5 227 93-348 45-304 (370)
116 cd08219 STKc_Nek3 Catalytic do 99.9 7.1E-26 1.5E-30 219.1 17.1 222 93-346 2-250 (255)
117 cd07878 STKc_p38beta_MAPK11 Ca 99.9 3.2E-26 7E-31 232.6 15.3 222 93-349 17-299 (343)
118 cd05605 STKc_GRK4_like Catalyt 99.9 4.4E-26 9.6E-31 225.7 15.8 220 93-343 2-251 (285)
119 PRK13184 pknD serine/threonine 99.9 4E-26 8.6E-31 256.4 17.1 232 93-345 4-282 (932)
120 cd05049 PTKc_Trk Catalytic dom 99.9 4E-26 8.6E-31 223.6 14.9 222 93-345 7-274 (280)
121 KOG0667 Dual-specificity tyros 99.9 2.2E-26 4.7E-31 244.2 13.7 179 92-306 187-384 (586)
122 cd05090 PTKc_Ror1 Catalytic do 99.9 6.2E-26 1.4E-30 223.4 16.1 221 93-344 7-275 (283)
123 PHA03209 serine/threonine kina 99.9 2.7E-26 5.8E-31 235.6 14.0 173 92-305 67-251 (357)
124 cd05075 PTKc_Axl Catalytic dom 99.9 4.2E-26 9.2E-31 222.5 14.7 223 94-346 2-265 (272)
125 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 5E-26 1.1E-30 223.9 15.4 224 93-346 6-277 (284)
126 cd05114 PTKc_Tec_Rlk Catalytic 99.9 7.3E-26 1.6E-30 219.5 16.2 220 93-345 6-251 (256)
127 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 5.9E-26 1.3E-30 223.6 15.8 225 93-346 6-275 (283)
128 cd05085 PTKc_Fer Catalytic dom 99.9 6.4E-26 1.4E-30 218.5 15.7 217 97-345 1-244 (250)
129 cd05106 PTKc_CSF-1R Catalytic 99.9 3.8E-26 8.2E-31 236.4 14.9 222 93-345 40-365 (374)
130 KOG1989 ARK protein kinase fam 99.9 2.9E-26 6.2E-31 249.8 14.5 224 92-345 38-304 (738)
131 cd08228 STKc_Nek6 Catalytic do 99.9 4.8E-26 1E-30 221.5 14.6 222 93-345 4-258 (267)
132 cd06628 STKc_MAPKKK_Byr2_like 99.9 8.7E-26 1.9E-30 219.7 16.2 235 94-346 3-262 (267)
133 cd05064 PTKc_EphR_A10 Catalyti 99.9 6.9E-26 1.5E-30 221.7 15.5 222 93-345 7-258 (266)
134 KOG0658 Glycogen synthase kina 99.9 1.2E-26 2.6E-31 232.2 10.1 228 91-357 24-315 (364)
135 cd05622 STKc_ROCK1 Catalytic d 99.9 9.7E-26 2.1E-30 233.1 17.3 226 92-347 44-303 (371)
136 cd06652 STKc_MEKK2 Catalytic d 99.9 7.5E-26 1.6E-30 220.5 15.5 228 93-346 4-259 (265)
137 cd06645 STKc_MAP4K3 Catalytic 99.9 4E-26 8.6E-31 222.4 13.5 221 93-346 11-263 (267)
138 cd06631 STKc_YSK4 Catalytic do 99.9 1E-25 2.2E-30 219.3 16.1 234 93-347 2-261 (265)
139 cd06656 STKc_PAK3 Catalytic do 99.9 5.9E-26 1.3E-30 226.4 14.7 224 93-349 21-270 (297)
140 KOG0663 Protein kinase PITSLRE 99.9 1.5E-26 3.3E-31 228.8 10.3 229 93-351 78-364 (419)
141 cd07867 STKc_CDC2L6 Catalytic 99.9 6.2E-26 1.3E-30 226.7 14.8 181 95-308 5-214 (317)
142 cd07873 STKc_PCTAIRE1 Catalyti 99.9 8.4E-26 1.8E-30 225.0 15.6 226 93-351 8-289 (301)
143 cd05048 PTKc_Ror Catalytic Dom 99.9 9.8E-26 2.1E-30 221.5 15.8 223 93-345 7-276 (283)
144 cd05034 PTKc_Src_like Catalyti 99.9 1.2E-25 2.7E-30 217.9 16.3 220 93-345 8-254 (261)
145 cd08529 STKc_FA2-like Catalyti 99.9 1.3E-25 2.8E-30 216.5 16.3 224 93-347 2-252 (256)
146 cd06654 STKc_PAK1 Catalytic do 99.9 6.6E-26 1.4E-30 225.9 14.7 222 93-347 22-269 (296)
147 KOG0032 Ca2+/calmodulin-depend 99.9 8.3E-26 1.8E-30 234.6 15.7 223 92-347 36-292 (382)
148 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 8.7E-26 1.9E-30 219.0 14.9 224 93-346 4-259 (267)
149 cd06637 STKc_TNIK Catalytic do 99.9 6.5E-26 1.4E-30 221.1 14.0 221 92-346 7-267 (272)
150 cd05088 PTKc_Tie2 Catalytic do 99.9 1.4E-25 3E-30 224.4 16.7 221 93-347 9-275 (303)
151 cd05630 STKc_GRK6 Catalytic do 99.9 9.9E-26 2.2E-30 223.5 15.5 220 93-343 2-251 (285)
152 PHA03207 serine/threonine kina 99.9 5.4E-26 1.2E-30 236.3 14.2 221 92-349 93-376 (392)
153 cd08223 STKc_Nek4 Catalytic do 99.9 1.5E-25 3.3E-30 216.4 16.2 223 93-346 2-252 (257)
154 cd05116 PTKc_Syk Catalytic dom 99.9 1.3E-25 2.9E-30 218.0 15.7 219 98-344 2-247 (257)
155 cd05052 PTKc_Abl Catalytic dom 99.9 1.2E-25 2.6E-30 219.1 15.3 219 93-345 8-255 (263)
156 cd06613 STKc_MAP4K3_like Catal 99.9 1.2E-25 2.7E-30 217.3 15.3 221 93-346 5-258 (262)
157 cd06644 STKc_STK10_LOK Catalyt 99.9 1E-25 2.2E-30 223.2 14.8 225 91-348 12-269 (292)
158 cd05035 PTKc_Axl_like Catalyti 99.9 1.7E-25 3.8E-30 217.6 15.9 222 94-345 2-265 (273)
159 cd05113 PTKc_Btk_Bmx Catalytic 99.9 1.5E-25 3.3E-30 218.0 15.4 220 93-346 6-252 (256)
160 cd05108 PTKc_EGFR Catalytic do 99.9 1.7E-25 3.7E-30 224.7 16.2 225 93-347 9-263 (316)
161 cd06655 STKc_PAK2 Catalytic do 99.9 2.6E-25 5.7E-30 221.8 17.2 225 92-349 20-270 (296)
162 PHA02988 hypothetical protein; 99.9 1.1E-25 2.4E-30 223.5 14.4 216 97-346 26-273 (283)
163 PTZ00284 protein kinase; Provi 99.9 9.4E-26 2E-30 239.8 14.9 220 92-347 130-437 (467)
164 cd05097 PTKc_DDR_like Catalyti 99.9 1.6E-25 3.5E-30 222.3 15.4 222 93-344 7-288 (295)
165 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.5E-25 3.2E-30 234.6 15.9 224 92-345 38-390 (400)
166 cd08229 STKc_Nek7 Catalytic do 99.9 1.2E-25 2.5E-30 218.8 14.1 222 93-344 4-257 (267)
167 cd05094 PTKc_TrkC Catalytic do 99.9 2E-25 4.4E-30 221.2 16.0 224 93-347 7-277 (291)
168 cd07861 STKc_CDK1_euk Catalyti 99.9 1.2E-25 2.5E-30 220.8 14.0 222 93-346 2-280 (285)
169 cd05095 PTKc_DDR2 Catalytic do 99.9 2.1E-25 4.7E-30 221.5 16.0 223 93-345 7-290 (296)
170 cd05109 PTKc_HER2 Catalytic do 99.9 2.9E-25 6.3E-30 218.2 16.7 225 93-347 9-263 (279)
171 cd06642 STKc_STK25-YSK1 Cataly 99.9 7.1E-26 1.5E-30 222.3 12.3 222 93-346 6-251 (277)
172 cd05059 PTKc_Tec_like Catalyti 99.9 1.8E-25 3.9E-30 217.0 14.8 219 93-345 6-251 (256)
173 cd05148 PTKc_Srm_Brk Catalytic 99.9 9.4E-26 2E-30 218.7 12.9 220 93-346 8-255 (261)
174 cd05093 PTKc_TrkB Catalytic do 99.9 2.1E-25 4.7E-30 220.7 15.5 221 93-345 7-272 (288)
175 cd05597 STKc_DMPK_like Catalyt 99.9 3.3E-25 7.1E-30 224.9 17.3 227 93-348 3-266 (331)
176 cd05580 STKc_PKA Catalytic dom 99.9 4.1E-25 8.9E-30 218.9 17.5 218 93-343 3-244 (290)
177 cd05054 PTKc_VEGFR Catalytic d 99.9 1.4E-25 2.9E-30 228.8 14.4 223 93-346 9-327 (337)
178 cd08218 STKc_Nek1 Catalytic do 99.9 3.2E-25 7E-30 214.4 16.3 223 93-346 2-251 (256)
179 cd08221 STKc_Nek9 Catalytic do 99.9 3.5E-25 7.5E-30 214.1 16.4 223 93-346 2-251 (256)
180 KOG0594 Protein kinase PCTAIRE 99.9 1.4E-25 3.1E-30 224.1 13.9 227 96-353 16-307 (323)
181 KOG0659 Cdk activating kinase 99.9 1.2E-25 2.7E-30 216.7 13.0 225 93-349 4-282 (318)
182 cd05062 PTKc_IGF-1R Catalytic 99.9 2.3E-25 5E-30 218.7 15.2 224 93-346 8-272 (277)
183 cd05609 STKc_MAST Catalytic do 99.9 5.8E-25 1.2E-29 219.6 18.2 231 93-344 3-266 (305)
184 cd05073 PTKc_Hck Catalytic dom 99.9 3.7E-25 8E-30 215.3 16.2 221 93-345 8-253 (260)
185 cd05624 STKc_MRCK_beta Catalyt 99.9 3.6E-25 7.7E-30 224.7 16.7 216 93-337 3-253 (331)
186 cd07839 STKc_CDK5 Catalytic do 99.9 1.4E-25 3E-30 220.5 13.2 223 93-347 2-280 (284)
187 cd05082 PTKc_Csk Catalytic dom 99.9 3.4E-25 7.3E-30 214.8 15.6 214 93-345 8-249 (256)
188 cd06636 STKc_MAP4K4_6 Catalyti 99.9 3.1E-25 6.7E-30 218.1 15.5 222 91-346 16-277 (282)
189 cd05083 PTKc_Chk Catalytic dom 99.9 3.2E-25 7E-30 214.7 15.4 215 93-347 8-249 (254)
190 cd06629 STKc_MAPKKK_Bck1_like 99.9 5E-25 1.1E-29 215.2 16.8 232 93-345 3-266 (272)
191 cd06615 PKc_MEK Catalytic doma 99.9 3.5E-25 7.5E-30 222.0 16.1 223 93-349 3-288 (308)
192 cd06609 STKc_MST3_like Catalyt 99.9 2.6E-25 5.5E-30 217.8 14.7 225 93-347 3-250 (274)
193 cd05039 PTKc_Csk_like Catalyti 99.9 4.9E-25 1.1E-29 213.4 16.4 214 93-345 8-249 (256)
194 cd06632 STKc_MEKK1_plant Catal 99.9 3.1E-25 6.6E-30 213.8 14.9 224 94-346 3-253 (258)
195 cd06640 STKc_MST4 Catalytic do 99.9 2.1E-25 4.5E-30 219.3 13.7 223 93-347 6-252 (277)
196 cd06611 STKc_SLK_like Catalyti 99.9 1.9E-25 4.1E-30 219.4 13.4 223 93-348 7-262 (280)
197 KOG0197 Tyrosine kinases [Sign 99.9 2E-25 4.4E-30 232.3 14.1 218 94-344 209-453 (468)
198 cd05033 PTKc_EphR Catalytic do 99.9 5.2E-25 1.1E-29 214.7 16.2 222 93-345 6-258 (266)
199 cd08217 STKc_Nek2 Catalytic do 99.9 2.9E-25 6.2E-30 214.2 14.2 223 93-346 2-260 (265)
200 cd05061 PTKc_InsR Catalytic do 99.9 3.7E-25 8.1E-30 219.0 15.4 225 93-347 8-273 (288)
201 cd05089 PTKc_Tie1 Catalytic do 99.9 5.6E-25 1.2E-29 218.9 16.7 220 93-346 4-269 (297)
202 cd06643 STKc_SLK Catalytic dom 99.9 3.5E-25 7.6E-30 218.0 14.9 222 93-347 7-261 (282)
203 cd00192 PTKc Catalytic domain 99.9 4.1E-25 8.8E-30 212.4 14.8 219 97-345 1-257 (262)
204 cd05051 PTKc_DDR Catalytic dom 99.9 6.7E-25 1.5E-29 216.9 16.6 222 93-345 7-290 (296)
205 cd06610 STKc_OSR1_SPAK Catalyt 99.9 4.4E-25 9.5E-30 213.8 15.0 225 93-346 3-262 (267)
206 cd05574 STKc_phototropin_like 99.9 5.2E-25 1.1E-29 220.5 16.0 231 93-344 3-281 (316)
207 cd05032 PTKc_InsR_like Catalyt 99.9 5.1E-25 1.1E-29 215.4 15.5 224 93-346 8-272 (277)
208 PHA03211 serine/threonine kina 99.9 2.4E-25 5.2E-30 237.0 14.2 220 90-347 168-454 (461)
209 cd07847 STKc_CDKL1_4 Catalytic 99.9 5E-25 1.1E-29 216.2 15.3 223 93-346 3-281 (286)
210 cd05053 PTKc_FGFR Catalytic do 99.9 1.1E-24 2.4E-29 215.3 17.9 224 93-347 14-286 (293)
211 cd06653 STKc_MEKK3_like_1 Cata 99.9 7.7E-25 1.7E-29 213.5 16.3 229 93-347 4-260 (264)
212 KOG4250 TANK binding protein k 99.9 1E-25 2.2E-30 240.4 10.8 187 95-312 17-226 (732)
213 cd05050 PTKc_Musk Catalytic do 99.9 5E-25 1.1E-29 217.5 15.1 222 93-345 7-282 (288)
214 cd05045 PTKc_RET Catalytic dom 99.9 4.9E-25 1.1E-29 218.0 15.0 223 93-346 2-280 (290)
215 cd07833 STKc_CDKL Catalytic do 99.9 4E-25 8.7E-30 217.1 14.2 224 93-346 3-283 (288)
216 cd05066 PTKc_EphR_A Catalytic 99.9 8.8E-25 1.9E-29 213.5 16.5 224 93-345 6-259 (267)
217 cd07844 STKc_PCTAIRE_like Cata 99.9 4.8E-25 1E-29 217.7 14.7 222 93-347 7-287 (291)
218 cd05122 PKc_STE Catalytic doma 99.9 8.3E-25 1.8E-29 208.4 15.8 219 93-345 2-248 (253)
219 cd07832 STKc_CCRK Catalytic do 99.9 7E-25 1.5E-29 215.1 15.6 223 93-346 2-280 (286)
220 cd05103 PTKc_VEGFR2 Catalytic 99.9 4.5E-25 9.7E-30 225.0 14.7 223 93-346 9-333 (343)
221 cd06638 STKc_myosinIIIA Cataly 99.9 7.7E-25 1.7E-29 215.4 15.9 220 93-347 20-282 (286)
222 cd08227 PK_STRAD_alpha Pseudok 99.9 4.6E-25 1E-29 222.9 14.6 230 95-349 2-308 (327)
223 cd05055 PTKc_PDGFR Catalytic d 99.9 7.5E-25 1.6E-29 219.2 15.9 224 93-346 37-295 (302)
224 cd05119 RIO RIO kinase family, 99.9 1.2E-24 2.5E-29 202.4 16.0 178 95-273 1-186 (187)
225 cd06623 PKc_MAPKK_plant_like C 99.9 9E-25 1.9E-29 211.3 15.8 223 93-347 3-255 (264)
226 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 8.2E-25 1.8E-29 214.1 15.7 225 93-346 6-277 (284)
227 cd05041 PTKc_Fes_like Catalyti 99.9 7.6E-25 1.7E-29 211.1 15.1 219 97-346 1-246 (251)
228 cd05091 PTKc_Ror2 Catalytic do 99.9 3.8E-25 8.1E-30 217.6 13.1 222 93-344 7-275 (283)
229 KOG0193 Serine/threonine prote 99.9 4.3E-25 9.3E-30 232.0 14.1 223 94-347 395-648 (678)
230 PTZ00266 NIMA-related protein 99.9 5.9E-25 1.3E-29 248.1 16.2 223 93-347 15-294 (1021)
231 cd05060 PTKc_Syk_like Catalyti 99.9 9.2E-25 2E-29 211.9 15.5 221 97-346 1-249 (257)
232 cd06917 STKc_NAK1_like Catalyt 99.9 6.4E-25 1.4E-29 215.0 14.5 224 93-348 3-255 (277)
233 cd06605 PKc_MAPKK Catalytic do 99.9 3.8E-25 8.2E-30 214.6 12.6 222 94-347 4-256 (265)
234 KOG0611 Predicted serine/threo 99.9 2.2E-25 4.9E-30 224.7 11.2 219 92-344 54-299 (668)
235 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 7.3E-25 1.6E-29 215.9 14.7 221 93-348 3-262 (286)
236 cd07850 STKc_JNK Catalytic dom 99.9 9.8E-25 2.1E-29 223.0 16.1 223 93-348 18-311 (353)
237 cd05101 PTKc_FGFR2 Catalytic d 99.9 1.2E-24 2.6E-29 216.9 16.4 224 93-347 17-291 (304)
238 cd05623 STKc_MRCK_alpha Cataly 99.9 2E-24 4.3E-29 219.1 18.3 227 93-348 3-266 (332)
239 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 6E-25 1.3E-29 216.8 14.1 223 93-349 7-267 (284)
240 cd05115 PTKc_Zap-70 Catalytic 99.9 8.7E-25 1.9E-29 213.1 14.9 218 98-344 2-247 (257)
241 cd05092 PTKc_TrkA Catalytic do 99.9 8.6E-25 1.9E-29 215.5 15.0 220 94-345 8-274 (280)
242 cd05036 PTKc_ALK_LTK Catalytic 99.9 9.1E-25 2E-29 214.8 15.2 224 93-346 8-272 (277)
243 cd06651 STKc_MEKK3 Catalytic d 99.9 1.1E-24 2.4E-29 212.6 15.7 227 93-346 4-259 (266)
244 cd07846 STKc_CDKL2_3 Catalytic 99.9 5.2E-25 1.1E-29 216.3 13.4 222 93-345 3-280 (286)
245 cd06659 STKc_PAK6 Catalytic do 99.9 3.7E-25 8.1E-30 220.8 12.3 221 95-348 25-271 (297)
246 cd06608 STKc_myosinIII_like Ca 99.9 1.1E-24 2.4E-29 211.5 15.3 221 92-346 7-270 (275)
247 cd07841 STKc_CDK7 Catalytic do 99.9 1.1E-24 2.3E-29 215.9 15.3 227 93-348 2-282 (298)
248 cd06627 STKc_Cdc7_like Catalyt 99.9 2.1E-24 4.5E-29 207.2 16.8 223 93-346 2-249 (254)
249 cd05578 STKc_Yank1 Catalytic d 99.9 8.3E-25 1.8E-29 212.0 14.1 219 93-342 2-247 (258)
250 cd05040 PTKc_Ack_like Catalyti 99.9 1.1E-24 2.3E-29 210.9 14.7 220 97-346 1-252 (257)
251 cd05112 PTKc_Itk Catalytic dom 99.9 1.5E-24 3.3E-29 209.6 15.7 219 93-345 6-251 (256)
252 cd05058 PTKc_Met_Ron Catalytic 99.9 1E-24 2.2E-29 211.5 14.6 222 97-346 1-253 (262)
253 cd06658 STKc_PAK5 Catalytic do 99.9 3.8E-25 8.2E-30 220.3 11.8 220 96-348 27-272 (292)
254 cd06612 STKc_MST1_2 Catalytic 99.9 9.2E-25 2E-29 210.6 14.0 219 93-346 5-251 (256)
255 cd06641 STKc_MST3 Catalytic do 99.9 1.1E-24 2.4E-29 214.1 14.9 224 92-347 5-252 (277)
256 KOG0033 Ca2+/calmodulin-depend 99.9 1.8E-26 3.9E-31 220.3 2.0 220 93-347 13-266 (355)
257 cd07837 STKc_CdkB_plant Cataly 99.9 9.1E-25 2E-29 215.9 14.0 222 93-346 3-289 (295)
258 cd05065 PTKc_EphR_B Catalytic 99.9 2.5E-24 5.3E-29 210.2 16.8 224 93-344 6-260 (269)
259 cd05111 PTK_HER3 Pseudokinase 99.9 1.9E-24 4.1E-29 213.2 16.1 223 93-346 9-262 (279)
260 cd08220 STKc_Nek8 Catalytic do 99.9 1.8E-24 4E-29 208.5 15.6 222 93-346 2-251 (256)
261 cd06639 STKc_myosinIIIB Cataly 99.9 2.8E-24 6.1E-29 212.5 17.0 219 93-346 24-285 (291)
262 smart00219 TyrKc Tyrosine kina 99.9 1.8E-24 3.9E-29 208.1 15.2 221 94-345 2-254 (258)
263 cd05098 PTKc_FGFR1 Catalytic d 99.9 1.9E-24 4.1E-29 216.1 15.9 225 93-347 20-294 (307)
264 cd06630 STKc_MEKK1 Catalytic d 99.9 1.8E-24 3.8E-29 210.3 15.2 230 93-346 2-262 (268)
265 KOG0579 Ste20-like serine/thre 99.9 6.7E-26 1.4E-30 237.8 5.3 217 93-345 34-286 (1187)
266 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 5.4E-25 1.2E-29 214.2 11.3 213 97-346 1-254 (258)
267 cd07860 STKc_CDK2_3 Catalytic 99.9 1.4E-24 3E-29 213.4 14.3 222 93-346 2-279 (284)
268 cd05577 STKc_GRK Catalytic dom 99.9 1.8E-24 3.8E-29 212.7 15.0 214 99-344 1-245 (277)
269 PHA03210 serine/threonine kina 99.9 5.2E-25 1.1E-29 236.7 12.1 242 93-349 150-455 (501)
270 cd05056 PTKc_FAK Catalytic dom 99.9 2.5E-24 5.5E-29 210.3 16.0 223 93-347 8-260 (270)
271 cd07855 STKc_ERK5 Catalytic do 99.9 1.2E-24 2.7E-29 220.4 14.1 228 92-347 6-293 (334)
272 cd06624 STKc_ASK Catalytic dom 99.9 2.6E-24 5.7E-29 209.9 15.8 216 97-346 14-263 (268)
273 cd07870 STKc_PFTAIRE2 Catalyti 99.9 2.3E-24 4.9E-29 213.2 15.5 222 92-346 6-286 (291)
274 cd07849 STKc_ERK1_2_like Catal 99.9 1.9E-24 4.2E-29 219.1 15.3 226 93-348 7-292 (336)
275 KOG1035 eIF-2alpha kinase GCN2 99.9 1.3E-25 2.7E-30 250.1 7.1 167 182-349 671-872 (1351)
276 cd05099 PTKc_FGFR4 Catalytic d 99.9 3.4E-24 7.3E-29 215.2 16.7 225 93-347 14-288 (314)
277 cd05633 STKc_GRK3 Catalytic do 99.9 3.2E-24 6.9E-29 212.0 16.1 214 98-341 1-243 (279)
278 cd05046 PTK_CCK4 Pseudokinase 99.9 3.1E-24 6.7E-29 209.9 15.8 223 93-346 7-270 (275)
279 cd08215 STKc_Nek Catalytic dom 99.9 2.9E-24 6.2E-29 206.0 15.3 224 93-347 2-254 (258)
280 cd05047 PTKc_Tie Catalytic dom 99.9 3.5E-24 7.6E-29 209.8 16.2 215 97-345 1-261 (270)
281 cd05581 STKc_PDK1 Catalytic do 99.9 1.7E-24 3.8E-29 211.0 14.0 230 93-343 3-268 (280)
282 cd06648 STKc_PAK_II Catalytic 99.9 3E-24 6.6E-29 212.6 15.8 220 96-348 24-269 (285)
283 KOG0580 Serine/threonine prote 99.9 4.1E-25 8.8E-30 210.5 9.0 217 93-342 24-267 (281)
284 cd06606 STKc_MAPKKK Catalytic 99.9 3.4E-24 7.4E-29 205.0 15.6 225 93-346 2-255 (260)
285 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 3.1E-24 6.8E-29 209.8 15.6 218 98-346 2-264 (269)
286 PHA02882 putative serine/threo 99.9 4.2E-24 9.1E-29 212.9 16.8 238 92-345 13-289 (294)
287 PF07714 Pkinase_Tyr: Protein 99.9 9.1E-25 2E-29 213.6 11.7 219 95-344 3-254 (259)
288 cd06626 STKc_MEKK4 Catalytic d 99.9 5.3E-24 1.1E-28 206.2 16.8 225 93-345 2-258 (264)
289 PLN00009 cyclin-dependent kina 99.9 2.8E-24 6.1E-29 212.8 15.2 225 93-349 4-285 (294)
290 cd07831 STKc_MOK Catalytic dom 99.9 2.5E-24 5.5E-29 210.7 14.7 219 93-346 1-277 (282)
291 cd06647 STKc_PAK_I Catalytic d 99.9 3E-24 6.6E-29 213.6 15.0 224 93-349 21-270 (293)
292 cd06607 STKc_TAO Catalytic dom 99.9 3.5E-24 7.5E-29 214.2 15.5 221 93-348 17-267 (307)
293 cd05057 PTKc_EGFR_like Catalyt 99.9 5.9E-24 1.3E-28 208.9 16.7 225 93-347 9-263 (279)
294 cd05063 PTKc_EphR_A2 Catalytic 99.9 4.7E-24 1E-28 207.9 15.8 223 93-345 7-260 (268)
295 cd05613 STKc_MSK1_N N-terminal 99.9 5.2E-24 1.1E-28 210.5 16.3 223 93-342 2-257 (290)
296 cd05042 PTKc_Aatyk Catalytic d 99.9 4.8E-24 1E-28 208.2 15.7 217 98-346 2-264 (269)
297 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.7E-24 7.9E-29 206.7 14.6 211 97-345 1-254 (259)
298 cd05100 PTKc_FGFR3 Catalytic d 99.9 5.9E-24 1.3E-28 215.4 16.7 226 92-347 13-288 (334)
299 cd07842 STKc_CDK8_like Catalyt 99.9 2.5E-24 5.4E-29 214.5 13.7 226 93-346 2-311 (316)
300 cd06614 STKc_PAK Catalytic dom 99.9 3.3E-24 7.1E-29 211.5 14.4 222 93-348 21-270 (286)
301 cd08225 STKc_Nek5 Catalytic do 99.9 3.3E-24 7.1E-29 206.8 14.0 221 93-345 2-251 (257)
302 cd05043 PTK_Ryk Pseudokinase d 99.9 5.3E-24 1.1E-28 209.1 15.7 222 93-345 8-269 (280)
303 cd07845 STKc_CDK10 Catalytic d 99.9 4E-24 8.7E-29 213.7 15.1 225 93-349 9-291 (309)
304 cd05074 PTKc_Tyro3 Catalytic d 99.9 2.7E-24 5.8E-29 209.9 13.4 223 94-345 2-265 (273)
305 cd07865 STKc_CDK9 Catalytic do 99.9 5.1E-24 1.1E-28 211.4 15.5 225 93-346 14-305 (310)
306 cd07843 STKc_CDC2L1 Catalytic 99.9 2.7E-24 5.8E-29 212.8 13.4 223 93-347 7-289 (293)
307 cd06617 PKc_MKK3_6 Catalytic d 99.9 6.3E-24 1.4E-28 208.3 15.9 221 93-347 3-260 (283)
308 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 4.5E-24 9.8E-29 208.8 14.5 213 97-346 1-258 (262)
309 cd07830 STKc_MAK_like Catalyti 99.9 7.1E-24 1.5E-28 207.9 15.7 219 93-345 1-277 (283)
310 cd05107 PTKc_PDGFR_beta Cataly 99.9 5E-24 1.1E-28 223.1 15.6 224 93-346 39-393 (401)
311 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 5.7E-24 1.2E-28 210.4 14.9 222 93-348 3-266 (287)
312 cd06657 STKc_PAK4 Catalytic do 99.9 4.7E-24 1E-28 212.6 14.4 217 97-347 26-269 (292)
313 cd05606 STKc_beta_ARK Catalyti 99.9 6.2E-24 1.4E-28 209.6 15.0 219 98-348 1-255 (278)
314 KOG4721 Serine/threonine prote 99.9 1.8E-24 4E-29 225.2 11.6 203 97-344 130-360 (904)
315 cd05579 STKc_MAST_like Catalyt 99.9 5E-24 1.1E-28 205.5 13.8 222 99-342 1-248 (265)
316 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 3.5E-24 7.6E-29 211.2 12.8 211 98-345 2-269 (274)
317 cd07836 STKc_Pho85 Catalytic d 99.9 6.3E-24 1.4E-28 208.4 14.4 221 93-346 2-279 (284)
318 cd05118 STKc_CMGC Catalytic do 99.9 5.2E-24 1.1E-28 208.3 13.3 222 93-346 1-278 (283)
319 cd07880 STKc_p38gamma_MAPK12 C 99.9 1E-23 2.3E-28 214.9 16.0 224 93-349 17-299 (343)
320 cd08530 STKc_CNK2-like Catalyt 99.9 6.1E-24 1.3E-28 204.5 13.5 221 93-346 2-251 (256)
321 cd05611 STKc_Rim15_like Cataly 99.9 1.8E-23 3.9E-28 202.9 16.8 212 97-343 2-243 (260)
322 cd05110 PTKc_HER4 Catalytic do 99.9 9.6E-24 2.1E-28 210.8 15.1 224 94-347 10-263 (303)
323 cd07857 STKc_MPK1 Catalytic do 99.9 1.2E-23 2.6E-28 213.0 16.0 228 93-348 2-292 (332)
324 cd07834 STKc_MAPK Catalytic do 99.9 7E-24 1.5E-28 213.6 14.1 227 93-348 2-289 (330)
325 cd05572 STKc_cGK_PKG Catalytic 99.9 1.4E-23 3E-28 203.9 15.4 213 99-342 1-241 (262)
326 cd05044 PTKc_c-ros Catalytic d 99.9 3.6E-24 7.9E-29 208.5 11.4 219 97-345 1-263 (269)
327 cd08528 STKc_Nek10 Catalytic d 99.9 7.1E-24 1.5E-28 206.7 13.1 228 93-345 2-263 (269)
328 cd07835 STKc_CDK1_like Catalyt 99.9 1.4E-23 3.1E-28 206.1 15.1 222 93-346 1-278 (283)
329 cd07858 STKc_TEY_MAPK_plant Ca 99.9 1.2E-23 2.6E-28 213.6 14.6 225 93-349 7-292 (337)
330 cd05086 PTKc_Aatyk2 Catalytic 99.9 1.3E-23 2.8E-28 205.8 14.4 216 98-345 2-262 (268)
331 cd07877 STKc_p38alpha_MAPK14 C 99.9 1.7E-23 3.7E-28 213.6 15.5 224 93-349 19-301 (345)
332 cd07852 STKc_MAPK15 Catalytic 99.9 1.2E-23 2.5E-28 213.3 14.2 229 93-348 9-295 (337)
333 cd05583 STKc_MSK_N N-terminal 99.9 2E-23 4.4E-28 206.0 15.5 222 93-343 2-258 (288)
334 KOG4645 MAPKKK (MAP kinase kin 99.9 9.4E-25 2E-29 244.2 6.5 229 94-347 1238-1493(1509)
335 cd06633 STKc_TAO3 Catalytic do 99.9 2.5E-23 5.5E-28 209.1 16.3 222 93-349 23-274 (313)
336 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 2.8E-23 6E-28 210.7 16.5 222 92-348 11-288 (328)
337 cd06635 STKc_TAO1 Catalytic do 99.9 2.6E-23 5.6E-28 209.3 15.7 220 93-347 27-276 (317)
338 cd05576 STKc_RPK118_like Catal 99.9 1.7E-23 3.7E-28 201.8 13.7 203 102-345 4-226 (237)
339 cd07854 STKc_MAPK4_6 Catalytic 99.9 2E-23 4.4E-28 212.6 14.9 227 92-349 6-301 (342)
340 KOG0596 Dual specificity; seri 99.9 6.5E-24 1.4E-28 221.1 11.2 232 87-348 357-627 (677)
341 cd07879 STKc_p38delta_MAPK13 C 99.9 2.8E-23 6.1E-28 211.5 15.7 222 93-349 17-298 (342)
342 KOG0610 Putative serine/threon 99.9 2.4E-23 5.2E-28 211.1 14.6 234 94-348 80-388 (459)
343 cd07866 STKc_BUR1 Catalytic do 99.9 2.2E-23 4.7E-28 207.0 14.2 232 93-347 10-307 (311)
344 PHA03390 pk1 serine/threonine- 99.9 3.3E-23 7.1E-28 203.5 15.1 205 99-345 24-259 (267)
345 cd05123 STKc_AGC Catalytic dom 99.9 4.1E-23 8.8E-28 198.4 15.4 215 99-344 1-240 (250)
346 cd07851 STKc_p38 Catalytic dom 99.9 1.7E-23 3.6E-28 213.3 13.2 223 93-348 17-298 (343)
347 cd07840 STKc_CDK9_like Catalyt 99.9 4E-23 8.7E-28 202.1 15.4 223 93-346 1-282 (287)
348 cd07864 STKc_CDK12 Catalytic d 99.9 2.5E-23 5.5E-28 206.2 13.9 223 93-346 9-297 (302)
349 cd08216 PK_STRAD Pseudokinase 99.9 1.6E-23 3.5E-28 209.3 12.5 231 94-348 5-295 (314)
350 PLN03225 Serine/threonine-prot 99.9 3.7E-23 8E-28 225.4 16.3 226 92-349 133-451 (566)
351 KOG0599 Phosphorylase kinase g 99.9 7.5E-24 1.6E-28 205.0 9.6 225 95-347 21-282 (411)
352 cd08226 PK_STRAD_beta Pseudoki 99.9 2.2E-23 4.8E-28 210.7 13.3 227 97-349 4-309 (328)
353 cd07829 STKc_CDK_like Catalyti 99.9 2.5E-23 5.4E-28 203.4 13.2 221 94-346 2-277 (282)
354 cd07838 STKc_CDK4_6_like Catal 99.9 7.9E-23 1.7E-27 200.4 16.6 221 93-346 1-282 (287)
355 cd06634 STKc_TAO2 Catalytic do 99.9 5.1E-23 1.1E-27 206.3 15.2 224 93-349 17-268 (308)
356 KOG2345 Serine/threonine prote 99.9 3E-23 6.5E-28 198.6 12.4 230 89-347 19-295 (302)
357 PTZ00024 cyclin-dependent prot 99.9 4.7E-23 1E-27 208.5 14.6 245 94-349 12-314 (335)
358 KOG4717 Serine/threonine prote 99.9 1.8E-23 3.9E-28 215.9 10.8 225 92-346 19-268 (864)
359 cd06616 PKc_MKK4 Catalytic dom 99.9 4.1E-23 9E-28 203.6 12.3 219 96-348 9-267 (288)
360 PRK09188 serine/threonine prot 99.9 1.8E-22 3.9E-27 208.3 17.2 161 93-272 20-185 (365)
361 cd06618 PKc_MKK7 Catalytic dom 99.9 1E-22 2.2E-27 202.4 14.6 222 93-348 17-273 (296)
362 KOG0586 Serine/threonine prote 99.9 8.5E-23 1.8E-27 215.4 14.3 224 92-345 57-303 (596)
363 cd08222 STKc_Nek11 Catalytic d 99.9 4.7E-23 1E-27 200.0 11.5 222 93-345 2-254 (260)
364 PRK12274 serine/threonine prot 99.9 1.1E-22 2.4E-27 194.2 13.4 189 95-307 6-204 (218)
365 KOG4279 Serine/threonine prote 99.9 4.5E-23 9.7E-28 218.6 10.5 218 98-349 582-833 (1226)
366 KOG0194 Protein tyrosine kinas 99.9 1.1E-22 2.3E-27 214.3 12.9 224 94-347 160-415 (474)
367 KOG0603 Ribosomal protein S6 k 99.9 3.9E-23 8.4E-28 218.9 9.3 235 73-349 299-564 (612)
368 PRK10359 lipopolysaccharide co 99.9 3E-22 6.5E-27 194.1 14.6 175 93-305 33-217 (232)
369 KOG0604 MAP kinase-activated p 99.9 2.3E-23 4.9E-28 203.9 6.6 213 97-347 68-321 (400)
370 KOG0612 Rho-associated, coiled 99.9 7.5E-23 1.6E-27 226.7 10.6 226 81-334 65-322 (1317)
371 KOG0574 STE20-like serine/thre 99.9 3.3E-24 7.2E-29 209.6 -0.3 220 92-346 34-281 (502)
372 PF09202 Rio2_N: Rio2, N-termi 99.9 2.5E-23 5.5E-28 169.7 4.4 82 8-89 1-82 (82)
373 KOG4236 Serine/threonine prote 99.9 3.7E-22 7.9E-27 206.6 11.9 221 97-347 570-818 (888)
374 KOG0668 Casein kinase II, alph 99.9 1.3E-22 2.7E-27 192.5 6.8 216 93-347 40-321 (338)
375 KOG0587 Traf2- and Nck-interac 99.9 1.1E-21 2.3E-26 213.4 14.8 234 81-347 9-281 (953)
376 KOG0690 Serine/threonine prote 99.9 2.4E-22 5.3E-27 198.4 8.9 219 95-341 172-412 (516)
377 cd00180 PKc Catalytic domain o 99.9 2.4E-21 5.2E-26 177.5 14.8 196 99-345 1-211 (215)
378 KOG0983 Mitogen-activated prot 99.9 1E-21 2.2E-26 190.4 11.2 222 96-349 97-350 (391)
379 KOG0986 G protein-coupled rece 99.9 4E-22 8.8E-27 203.8 8.7 227 93-349 187-443 (591)
380 KOG0696 Serine/threonine prote 99.9 6.4E-22 1.4E-26 200.2 9.6 220 94-347 352-600 (683)
381 KOG1151 Tousled-like protein k 99.9 9.5E-22 2.1E-26 200.3 10.0 231 95-345 467-738 (775)
382 KOG0608 Warts/lats-like serine 99.9 1E-21 2.2E-26 206.9 10.0 236 82-339 620-916 (1034)
383 PLN00113 leucine-rich repeat r 99.9 2.7E-21 5.9E-26 222.4 14.5 211 95-347 694-946 (968)
384 smart00220 S_TKc Serine/Threon 99.9 4.2E-21 9.1E-26 181.2 13.2 211 103-347 1-240 (244)
385 PLN03224 probable serine/threo 99.9 1.1E-20 2.4E-25 202.7 17.6 239 92-346 146-498 (507)
386 KOG0670 U4/U6-associated splic 99.8 2.5E-21 5.4E-26 200.5 11.1 193 77-306 420-631 (752)
387 KOG1095 Protein tyrosine kinas 99.8 6.6E-21 1.4E-25 213.8 14.4 224 94-347 695-956 (1025)
388 KOG1094 Discoidin domain recep 99.8 3.3E-21 7.2E-26 201.8 10.5 232 80-344 529-796 (807)
389 KOG1006 Mitogen-activated prot 99.8 2.5E-21 5.4E-26 187.1 6.4 215 97-347 70-326 (361)
390 KOG0607 MAP kinase-interacting 99.8 7.5E-21 1.6E-25 187.6 9.0 222 96-347 83-360 (463)
391 KOG0671 LAMMER dual specificit 99.8 1.8E-20 3.8E-25 188.7 11.8 176 93-307 91-306 (415)
392 KOG0662 Cyclin-dependent kinas 99.8 6.7E-21 1.5E-25 175.2 7.9 220 96-347 7-282 (292)
393 KOG1026 Nerve growth factor re 99.8 9.9E-21 2.1E-25 206.2 10.0 218 96-344 491-754 (774)
394 KOG0584 Serine/threonine prote 99.8 5E-21 1.1E-25 202.4 7.0 225 92-349 41-297 (632)
395 PRK01723 3-deoxy-D-manno-octul 99.8 9.7E-20 2.1E-24 178.1 14.9 168 97-277 37-215 (239)
396 KOG2269 Serine/threonine prote 99.8 1.5E-20 3.1E-25 186.9 8.5 209 80-307 241-474 (531)
397 TIGR01982 UbiB 2-polyprenylphe 99.8 2.8E-19 6.1E-24 189.3 16.2 211 20-253 63-309 (437)
398 smart00221 STYKc Protein kinas 99.8 5E-19 1.1E-23 166.2 14.4 185 94-309 2-199 (225)
399 KOG0695 Serine/threonine prote 99.8 1.1E-19 2.3E-24 180.3 10.0 216 93-340 252-502 (593)
400 cd05610 STKc_MASTL Catalytic d 99.8 5.3E-19 1.1E-23 196.5 16.1 139 93-252 6-155 (669)
401 PRK14879 serine/threonine prot 99.8 1.2E-18 2.5E-23 165.2 16.2 138 97-250 2-143 (211)
402 KOG0199 ACK and related non-re 99.8 1.2E-19 2.7E-24 193.0 9.6 250 95-374 114-400 (1039)
403 KOG0984 Mitogen-activated prot 99.8 2.2E-19 4.8E-24 168.3 9.9 177 96-308 51-250 (282)
404 KOG0576 Mitogen-activated prot 99.8 5.3E-20 1.1E-24 195.3 5.7 218 93-347 17-270 (829)
405 TIGR03724 arch_bud32 Kae1-asso 99.8 1.7E-18 3.7E-23 162.7 15.3 137 98-251 1-139 (199)
406 KOG0664 Nemo-like MAPK-related 99.8 4.3E-20 9.3E-25 179.0 2.4 181 96-305 58-253 (449)
407 KOG1027 Serine/threonine prote 99.8 3.7E-19 7.9E-24 193.0 8.8 219 91-347 509-766 (903)
408 KOG0196 Tyrosine kinase, EPH ( 99.8 5.5E-19 1.2E-23 190.2 9.9 220 94-343 632-882 (996)
409 KOG4257 Focal adhesion tyrosin 99.8 1.2E-18 2.5E-23 183.8 11.6 220 94-345 392-642 (974)
410 KOG1163 Casein kinase (serine/ 99.8 5.8E-18 1.3E-22 162.0 14.1 212 92-335 16-267 (341)
411 KOG0614 cGMP-dependent protein 99.8 3.9E-19 8.5E-24 183.9 4.7 214 96-343 425-667 (732)
412 KOG0666 Cyclin C-dependent kin 99.8 8.8E-19 1.9E-23 172.6 6.7 189 92-307 25-237 (438)
413 KOG0669 Cyclin T-dependent kin 99.7 2.4E-19 5.1E-24 172.3 1.6 247 95-372 21-341 (376)
414 KOG4278 Protein tyrosine kinas 99.7 3.9E-18 8.5E-23 179.5 9.8 215 94-344 270-515 (1157)
415 KOG1345 Serine/threonine kinas 99.7 7.4E-18 1.6E-22 163.6 9.6 210 92-339 25-275 (378)
416 KOG0665 Jun-N-terminal kinase 99.7 2.8E-18 6.1E-23 169.6 6.6 179 96-306 22-213 (369)
417 PRK04750 ubiB putative ubiquin 99.7 5.2E-17 1.1E-21 175.1 16.0 211 20-253 65-316 (537)
418 KOG1025 Epidermal growth facto 99.7 9.4E-18 2E-22 181.4 9.1 184 92-305 697-895 (1177)
419 KOG0200 Fibroblast/platelet-de 99.7 5.5E-17 1.2E-21 178.5 15.4 223 94-347 299-574 (609)
420 KOG1152 Signal transduction se 99.7 1.3E-17 2.9E-22 174.8 9.6 185 93-306 563-765 (772)
421 KOG3653 Transforming growth fa 99.7 2.3E-17 4.9E-22 170.1 9.9 216 95-347 214-498 (534)
422 KOG2052 Activin A type IB rece 99.7 1.8E-17 3.8E-22 169.8 7.6 178 94-305 214-421 (513)
423 PRK09605 bifunctional UGMP fam 99.7 1.1E-16 2.4E-21 173.7 13.7 139 95-251 337-477 (535)
424 COG3642 Mn2+-dependent serine/ 99.7 3.6E-16 7.9E-21 145.4 13.5 138 97-251 2-141 (204)
425 KOG1164 Casein kinase (serine/ 99.7 4.2E-16 9E-21 158.5 13.8 191 92-307 19-234 (322)
426 PLN00181 protein SPA1-RELATED; 99.7 6.9E-17 1.5E-21 182.8 8.3 167 180-347 53-264 (793)
427 KOG1165 Casein kinase (serine/ 99.7 1.1E-15 2.3E-20 152.2 13.8 220 90-341 27-288 (449)
428 KOG1167 Serine/threonine prote 99.7 1.5E-16 3.2E-21 162.1 7.6 193 91-308 36-276 (418)
429 COG0661 AarF Predicted unusual 99.7 8.3E-16 1.8E-20 164.8 13.6 211 20-253 71-317 (517)
430 PRK10345 hypothetical protein; 99.6 1.2E-15 2.6E-20 146.5 12.2 128 96-248 7-156 (210)
431 cd05120 APH_ChoK_like Aminogly 99.6 2.9E-15 6.3E-20 131.3 11.9 129 96-250 3-138 (155)
432 cd05151 ChoK Choline Kinase (C 99.6 5.2E-15 1.1E-19 134.9 12.6 126 97-250 4-136 (170)
433 COG0515 SPS1 Serine/threonine 99.6 1.8E-14 3.8E-19 138.3 15.7 230 93-347 2-274 (384)
434 KOG1166 Mitotic checkpoint ser 99.6 4.6E-15 9.9E-20 167.0 10.0 186 88-306 695-899 (974)
435 KOG3087 Serine/threonine prote 99.6 3E-14 6.6E-19 132.4 12.8 140 96-250 12-165 (229)
436 PF14531 Kinase-like: Kinase-l 99.4 3E-13 6.6E-18 135.2 9.9 230 94-339 15-288 (288)
437 KOG1235 Predicted unusual prot 99.4 8.6E-13 1.9E-17 141.5 14.0 206 26-254 116-358 (538)
438 KOG0590 Checkpoint kinase and 99.4 1.5E-13 3.3E-18 150.7 7.2 231 96-349 323-586 (601)
439 PF06293 Kdo: Lipopolysacchari 99.4 1.6E-12 3.5E-17 124.2 12.5 117 153-271 55-189 (206)
440 KOG1024 Receptor-like protein 99.4 1.7E-13 3.8E-18 138.8 5.5 223 93-344 286-547 (563)
441 smart00750 KIND kinase non-cat 99.4 3.2E-13 7E-18 123.7 6.7 121 205-347 21-164 (176)
442 KOG1290 Serine/threonine prote 99.4 6E-13 1.3E-17 138.1 9.3 141 68-235 58-222 (590)
443 PRK15123 lipopolysaccharide co 99.4 4.4E-12 9.6E-17 126.2 13.8 136 103-250 34-194 (268)
444 cd05154 ACAD10_11_like Acyl-Co 99.4 2.4E-12 5.2E-17 121.8 10.9 133 97-250 4-206 (223)
445 KOG1240 Protein kinase contain 99.3 3.6E-12 7.8E-17 142.4 6.9 225 94-347 26-290 (1431)
446 PRK09902 hypothetical protein; 99.2 1.5E-10 3.2E-15 110.9 11.8 134 99-250 26-179 (216)
447 PF06176 WaaY: Lipopolysacchar 99.2 5.2E-10 1.1E-14 107.7 13.8 166 68-251 7-184 (229)
448 KOG0603 Ribosomal protein S6 k 99.1 8.4E-12 1.8E-16 133.3 0.6 205 98-341 1-231 (612)
449 TIGR02172 Fb_sc_TIGR02172 Fibr 99.1 4.5E-10 9.8E-15 109.1 12.1 125 97-249 7-181 (226)
450 COG2112 Predicted Ser/Thr prot 99.1 4.1E-10 8.9E-15 104.5 11.1 133 95-254 26-159 (201)
451 KOG1033 eIF-2alpha kinase PEK/ 99.1 2.5E-11 5.4E-16 127.5 0.9 155 181-342 330-506 (516)
452 PF01636 APH: Phosphotransfera 99.0 1.2E-09 2.5E-14 103.6 10.5 129 97-250 3-197 (239)
453 KOG0606 Microtubule-associated 99.0 3.8E-10 8.3E-15 126.3 5.5 131 211-341 153-305 (1205)
454 cd05150 APH Aminoglycoside 3'- 98.9 1.1E-08 2.3E-13 99.6 13.6 125 98-249 5-192 (244)
455 cd05155 APH_ChoK_like_1 Unchar 98.9 9.3E-09 2E-13 99.8 12.7 124 97-249 3-193 (235)
456 KOG4158 BRPK/PTEN-induced prot 98.8 9.1E-09 2E-13 105.3 9.0 158 182-344 318-506 (598)
457 PRK05231 homoserine kinase; Pr 98.8 6E-08 1.3E-12 98.2 14.3 128 97-250 28-217 (319)
458 cd05157 ETNK_euk Ethanolamine 98.8 6.2E-08 1.3E-12 93.5 13.3 74 97-194 4-79 (235)
459 cd05153 HomoserineK_II Homoser 98.8 4.2E-08 9.1E-13 98.1 12.4 128 97-250 20-205 (296)
460 TIGR00938 thrB_alt homoserine 98.8 9.5E-08 2.1E-12 96.5 13.5 128 97-249 28-216 (307)
461 TIGR02721 ycfN_thiK thiamine k 98.8 4.8E-08 1E-12 96.0 11.0 127 98-249 3-174 (256)
462 KOG0590 Checkpoint kinase and 98.7 2.9E-09 6.4E-14 117.1 1.6 232 91-349 20-287 (601)
463 cd05156 ChoK_euk Choline Kinas 98.6 3.5E-07 7.5E-12 91.9 11.6 75 97-195 4-85 (302)
464 PRK10593 hypothetical protein; 98.6 8.7E-07 1.9E-11 89.6 13.4 74 96-194 19-100 (297)
465 COG2334 Putative homoserine ki 98.5 1.6E-06 3.6E-11 88.9 15.2 144 81-250 15-228 (331)
466 cd05152 MPH2' Macrolide 2'-Pho 98.5 1.3E-06 2.7E-11 87.6 13.4 72 100-195 20-92 (276)
467 PLN02876 acyl-CoA dehydrogenas 98.5 2.1E-06 4.6E-11 98.2 15.3 97 77-194 17-131 (822)
468 TIGR02906 spore_CotS spore coa 98.4 2.4E-06 5.3E-11 85.8 12.6 62 106-194 11-82 (313)
469 PRK11768 serine/threonine prot 98.4 3.4E-06 7.3E-11 86.3 13.0 71 101-194 35-114 (325)
470 PRK09550 mtnK methylthioribose 98.3 7.2E-06 1.6E-10 86.2 13.9 82 97-193 32-117 (401)
471 PLN02236 choline kinase 98.1 2.3E-05 5.1E-10 80.8 12.7 129 97-249 42-230 (344)
472 KOG1023 Natriuretic peptide re 98.1 3.4E-06 7.4E-11 90.1 6.3 117 180-307 20-155 (484)
473 PRK06148 hypothetical protein; 98.1 3E-05 6.4E-10 90.6 14.4 129 97-250 31-236 (1013)
474 KOG0195 Integrin-linked kinase 98.0 4.4E-06 9.5E-11 82.3 4.8 209 96-342 195-436 (448)
475 KOG0601 Cyclin-dependent kinas 98.0 6.9E-06 1.5E-10 88.1 6.7 225 94-349 268-515 (524)
476 COG3173 Predicted aminoglycosi 98.0 4.6E-05 1E-09 77.8 12.2 35 220-255 198-232 (321)
477 PF01633 Choline_kinase: Choli 98.0 2.5E-05 5.4E-10 74.5 9.5 112 115-250 2-174 (211)
478 PF10707 YrbL-PhoP_reg: PhoP r 98.0 9.8E-05 2.1E-09 70.6 13.5 142 96-245 6-166 (199)
479 PLN02421 phosphotransferase, a 98.0 6.3E-05 1.4E-09 77.2 12.5 75 97-195 20-98 (330)
480 KOG1266 Protein kinase [Signal 98.0 5.3E-06 1.2E-10 83.7 3.9 159 180-347 145-330 (458)
481 KOG0601 Cyclin-dependent kinas 97.9 7E-06 1.5E-10 88.1 4.3 223 93-346 116-377 (524)
482 PF03881 Fructosamin_kin: Fruc 97.8 0.0002 4.4E-09 72.2 12.2 71 96-192 22-97 (288)
483 KOG1236 Predicted unusual prot 97.8 6.1E-05 1.3E-09 78.5 8.4 139 97-235 195-379 (565)
484 TIGR02904 spore_ysxE spore coa 97.8 0.00019 4.1E-09 72.7 11.3 30 221-250 197-226 (309)
485 TIGR01767 MTRK 5-methylthiorib 97.8 9.2E-05 2E-09 76.7 9.1 78 98-191 2-84 (370)
486 cd05610 STKc_MASTL Catalytic d 97.7 1.6E-05 3.5E-10 89.1 3.1 120 223-349 499-635 (669)
487 PRK06149 hypothetical protein; 97.7 0.0003 6.5E-09 82.1 12.7 73 97-195 37-125 (972)
488 PLN02756 S-methyl-5-thioribose 97.7 0.00037 8E-09 73.4 12.0 80 96-191 37-119 (418)
489 PTZ00384 choline kinase; Provi 97.7 0.0005 1.1E-08 72.1 12.7 75 97-195 56-137 (383)
490 PRK12396 5-methylribose kinase 97.6 0.00028 6.1E-09 74.0 9.9 80 96-191 34-117 (409)
491 PF13095 FTA2: Kinetochore Sim 97.6 0.00067 1.4E-08 65.0 11.6 139 93-248 39-206 (207)
492 PTZ00296 choline kinase; Provi 97.5 0.00088 1.9E-08 71.6 12.9 75 97-195 111-194 (442)
493 PF12260 PIP49_C: Protein-kina 97.5 0.00039 8.4E-09 65.8 8.0 93 157-250 7-111 (188)
494 KOG1243 Protein kinase [Genera 97.5 0.0011 2.5E-08 72.5 12.3 154 113-306 35-199 (690)
495 PF04655 APH_6_hur: Aminoglyco 97.3 0.00071 1.5E-08 67.0 7.7 74 96-198 7-86 (253)
496 KOG2137 Protein kinase [Signal 97.2 0.0004 8.6E-09 76.2 5.2 139 209-349 107-266 (700)
497 KOG0606 Microtubule-associated 97.0 0.0019 4.1E-08 73.9 8.7 167 180-346 877-1087(1205)
498 COG4248 Uncharacterized protei 96.9 0.0042 9.1E-08 65.2 9.5 189 90-306 10-217 (637)
499 KOG1234 ABC (ATP binding casse 96.9 0.00055 1.2E-08 68.0 2.6 156 97-252 55-236 (363)
500 KOG1290 Serine/threonine prote 96.8 0.00079 1.7E-08 71.2 3.3 57 238-306 391-447 (590)
No 1
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.4e-77 Score=591.09 Aligned_cols=454 Identities=51% Similarity=0.822 Sum_probs=375.7
Q ss_pred CCcchhhhccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc-CCCccCccccccccc
Q 012042 1 MKLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD-SSKYDGFRLTYLGYD 79 (472)
Q Consensus 1 m~l~~~~~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~-~~~y~gy~lt~~g~d 79 (472)
|||+++.+||||.+|||||||+||||+||++||.++|.++|+|+.+.+.+.|+.|+|++|+... +..|+||+||+.|||
T Consensus 1 mKl~v~~mryLs~ddFRvLtAvEmgmrnHEiVP~~li~~ia~ik~gg~~k~l~dL~KhkLia~~r~~k~dGYRLTy~GyD 80 (465)
T KOG2268|consen 1 MKLNVSVMRYLSRDDFRVLTAVEMGMRNHEIVPTPLIASIAGIKGGGVTKVLSDLCKHKLIAYERNKKYDGYRLTYAGYD 80 (465)
T ss_pred CccchhhhhhhccchhHHHHHHHHhcccCccccHHHHHHHHhhccCchHHHHHHHHHhHHHHhhccccccceEeeeccch
Confidence 8999999999999999999999999999999999999999999999999999999999999974 568999999999999
Q ss_pred HHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHH
Q 012042 80 FLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKE 159 (472)
Q Consensus 80 ~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE 159 (472)
|+||++|.+||+++.+|+.||.|+++.||.+.+.+|++.++|++|.|+++|+.++++|+|++.+...+|++++|++|.+|
T Consensus 81 yLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kE 160 (465)
T KOG2268|consen 81 YLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKE 160 (465)
T ss_pred HHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCcceeeecCCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 160 FAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 160 ~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.+|+.|+.+|++||.|++.++||+|||++.|.||.++.+..+|..++..++..|..|..+|+||||++.+||||.+++.
T Consensus 161 fafmkaL~e~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~ 240 (465)
T KOG2268|consen 161 FAFMKALYERGFPVPKPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDK 240 (465)
T ss_pred HHHHHHHHHcCCCCCCcccccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCC
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhh--hhccCCcchhhhhc
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFAS--ISKTAGFLDKELAA 317 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~--~t~~~~~l~~~~~~ 317 (472)
+++|||+|+++.+||+|..||.||+.|+..||.++|+|.++. ++|-|.. .+...+.++..+.+
T Consensus 241 i~vIDFPQmvS~sh~nA~~YFdRDv~Ci~~fFrKkf~YE~ed---------------d~~~f~d~~~~~~~~~lD~~~~a 305 (465)
T KOG2268|consen 241 IVVIDFPQMVSTSHPNAEYYFDRDVECIRAFFRKKFGYEPED---------------DEPKFDDGSDVKREGNLDELLHA 305 (465)
T ss_pred EEEeechHhhccCCCccceeecccHHHHHHHHHHhcCCCCCC---------------CCcccccchhhhccCcccccccc
Confidence 999999999999999999999999999999999999997651 3344443 23445678888889
Q ss_pred cCCCHHHHHHHHHHHhcCcccCCCCCCCCC----CCCCccccccccCCCCccchhhccccCCCCCccccccCc---cccc
Q 012042 318 SGFTRKDQDVIQKFIGGSIEESGSDDEGSD----DGNESETNETNVDGLDSLHLAEQDVIHKNPDLNSKKEGV---SEEN 390 (472)
Q Consensus 318 ~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 390 (472)
+||++++...+++..+..-..-...+++.+ +..+.+.++.+...+.-..+++++....--|.....+.. -.+.
T Consensus 306 sGf~kk~~~~l~~~~~~ee~~~~~~dd~s~~~ee~~~~~e~d~~~~~~~~d~~l~~e~~e~~s~d~~e~~~~~~e~~~~~ 385 (465)
T KOG2268|consen 306 SGFTKKMSTDLEKAQEEEELEGYREDDESDNDEEEEEEGEGDEGDEDEIKDSSLSEEDSEQDSEDAQEEEERIIEALGSG 385 (465)
T ss_pred CCcchhhhhhhHHhhhhhhhhccccchhcccchhhhhcccccccchhhhhhhhcCcccchhchHHHHHHHHHHHHHHhcc
Confidence 999999988888776652211111111111 111112233333333333344444322222211111000 0001
Q ss_pred ccccccCCCCccccCCCCCCcCCccccccchHHHHHHHHHHHHHHHHHhhCCCccccccccccccCCCCCcchHHHHhhh
Q 012042 391 QQNSEAGQGSEHDRHNASDKEDDNETVNENDAELMKRIEKQRRRAVSAVRGGRKSLASRNSYKDKGGKSSNNSKIQKQLN 470 (472)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (472)
..+..- ...+.+++.+.|+-+++++++|.++++.+.++|.|+|++|+|+|||+..++||+|++++ ++.||+|+.-.+.
T Consensus 386 ~en~~~-~~~s~~~n~~e~~~~~~~~~~e~~~~~e~d~~~v~~r~~~~~r~rr~qk~~~~~~~~q~-~~~~~~~~~~~~a 463 (465)
T KOG2268|consen 386 VENLKV-DKLSNEKNEDEDEVGSNEEEEEKEEELEEDLGKVRRRRMAAARGRRKQKSSRNTKGKQS-AGRQRKKNKDVMA 463 (465)
T ss_pred cccccc-cccccccccccccccCChhhhhhhhhhhcChhHHHHHHHHHHHHHHHhhhhhhhhcccc-ccccccchhhhhh
Confidence 111100 01123445566788899999999999999999999999999999999999999999999 6999999876654
Q ss_pred c
Q 012042 471 N 471 (472)
Q Consensus 471 ~ 471 (472)
.
T Consensus 464 ~ 464 (465)
T KOG2268|consen 464 E 464 (465)
T ss_pred c
Confidence 3
No 2
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-61 Score=470.31 Aligned_cols=278 Identities=42% Similarity=0.767 Sum_probs=270.6
Q ss_pred CCcchhhhccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccH
Q 012042 1 MKLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDF 80 (472)
Q Consensus 1 m~l~~~~~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~ 80 (472)
|++.++.+++|+++|||||+|||.+|++|||||.++|.++|+++.++....|++|.+.+|+.+.+.+|.||++|+.|||+
T Consensus 1 ~~~~~~~~~~l~~~D~rlLraiE~~mR~~e~VP~~~i~~~ar~~~~~~~~~L~~L~~l~lv~r~~~~y~Gy~lT~~GyD~ 80 (304)
T COG0478 1 MKLVAEAYPKLSKEDFRLLRAIEGGMRSHEWVPLELIKKRARMDEEELLYRLKRLDKLKLVSRRTISYEGYQLTFSGYDA 80 (304)
T ss_pred CcchhhhhhhcCHHHHHHHHHHHhcccccccccHHHHHHHcCCCHHHHHHHHHHHHhcCceeccCCcceeEEEEecchhH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHH
Q 012042 81 LAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEF 160 (472)
Q Consensus 81 ~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~ 160 (472)
+||+.|.++|+++.|++.||.|++|.||.|.++.|.++|||++|.|+++|++++..|+|+....+.+|++.++..|++|+
T Consensus 81 LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf 160 (304)
T COG0478 81 LALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREF 160 (304)
T ss_pred HHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCcceeeecCCceeEEeecCCCChhhhh-ccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 161 AFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVN-QLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 161 ~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l~-~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
.+|.+|+..|++||.|+++++|++||||++|.+|..+. ...++..++..|++.+..+...|||||||+++|||++++|.
T Consensus 161 ~~L~~L~~~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 161 EALQRLYPEGVKVPKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred HHHHHhhhcCCCCCCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 99999999999999999999999999999999998875 45688899999999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccc
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLN 278 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~ 278 (472)
++||||+|++..+||+|.++|.||+.|+..||+++|++.
T Consensus 241 ~~vIDwPQ~v~~~hp~a~e~l~RDv~nii~yFrrky~~~ 279 (304)
T COG0478 241 IVVIDWPQAVPISHPDAEELLERDVENIIKYFRRKYGYK 279 (304)
T ss_pred EEEEeCcccccCCCCCHHHHHHhHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999984
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=270.92 Aligned_cols=215 Identities=14% Similarity=0.177 Sum_probs=170.9
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.+.||+|..|+||+|.+ ++++.+|+|++......- .+....+|+++|+.+.+ |
T Consensus 84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~---------------------~~~Qi~rEl~il~~~~s-----p 137 (364)
T KOG0581|consen 84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPA---------------------LQKQILRELEILRSCQS-----P 137 (364)
T ss_pred hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHH---------------------HHHHHHHHHHHHhhCCC-----C
Confidence 47899999999999999 689999999985432111 12245689999999865 5
Q ss_pred eeeec-------CC-ceeEEeecCCCChhhhhcc--CChH----HHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCc
Q 012042 175 NAVDC-------NR-HCVIMSLVQGYPLVQVNQL--QNPD----SVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 175 ~~i~~-------~~-~~LVMEyi~G~~L~~l~~~--~~~~----~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~ 239 (472)
.++.+ +. ..|+||||+|++|..+... ..++ .++.+++.+|.|||. ++||||||||.||||+..|.
T Consensus 138 yIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe 217 (364)
T KOG0581|consen 138 YIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE 217 (364)
T ss_pred CeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC
Confidence 55543 43 8899999999999997642 1233 488999999999995 99999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
|||||||.+..+.+.. ..+|.++..+++|+...++.|+.++||||||.+++|..+++.+.+.
T Consensus 218 VKicDFGVS~~lvnS~-----------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~ 286 (364)
T KOG0581|consen 218 VKICDFGVSGILVNSI-----------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD 286 (364)
T ss_pred EEeccccccHHhhhhh-----------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC
Confidence 9999999998553221 1346666677788877789999999999999999999998543221
Q ss_pred h------------hhhccC-CCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 K------------ELAASG-FTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~------------~~~~~~-~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+ .-.+.+ ||.+++..|..||+++|.+|||+.++..
T Consensus 287 ~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 287 IFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 112344 9999999999999999999999999887
No 4
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.97 E-value=1e-31 Score=254.51 Aligned_cols=175 Identities=24% Similarity=0.441 Sum_probs=148.7
Q ss_pred ecceecccCceeEEEEEeCC-------CCEEEEEEeecCcchhHHhhhhhHHhhhccc-------hhhHHHhHHHHHHHH
Q 012042 95 VGRQLGVGKESDIFEVARED-------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNS-------YNWLYLSRLAALKEF 160 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~~-------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~-------~~~~~~~r~~a~rE~ 160 (472)
+..+||+|++|.||.|...+ +..+|||+++.+..+|+ ..+.|+.+..+ .+|..+.+.|+++|+
T Consensus 1 ~~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk---~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~ 77 (197)
T cd05146 1 INGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFK---NRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEM 77 (197)
T ss_pred CCCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEc---ChhhhccCCcccccCcCCCCHHHHHHHHHHHHH
Confidence 35789999999999998753 47999999997777775 46778866544 467889999999999
Q ss_pred HHHHHhhhCCCCcceeeecCCceeEEeecCCCChhh--hhcc----CChHHHHHHHHHHHHHH-HHCCceeccCCCCcEE
Q 012042 161 AFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQ--VNQL----QNPDSVFETIIGLVVRL-AEHGLIHCDFNEFNIM 233 (472)
Q Consensus 161 ~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~--l~~~----~~~~~i~~qIl~aL~~L-H~~GIIHrDLKP~NIL 233 (472)
++|.+|+..|++||.|+...+++|||||+.|..+.. +.+. .....++.+++.+|..| |+.|||||||+|+|||
T Consensus 78 r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 78 HNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHHHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 999999999999999999999999999998743211 1111 12345789999999988 8999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccc
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~ 273 (472)
+. ++.++|||||||+..+||+|.++|.||+.|+.+||.+
T Consensus 158 ~~-~~~v~iIDF~qav~~~hp~a~~~l~RD~~ni~~fF~~ 196 (197)
T cd05146 158 WH-DGKVWFIDVSQSVEPTHPHGLEFLFRDCRNVIQFFQK 196 (197)
T ss_pred EE-CCcEEEEECCCceeCCCCCHHHHHHHHHHHHHHHhcC
Confidence 97 4789999999999999999999999999999999964
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.1e-31 Score=271.06 Aligned_cols=229 Identities=16% Similarity=0.176 Sum_probs=167.0
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.+.||+|+||.|-+|.. .+|+.||||++........ .+ ........++|+++|++|+|++
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~-----------s~----~~~~~~~v~~EieILkkL~HP~ 237 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC-----------SR----AIAKTRDVQNEIEILKKLSHPN 237 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc-----------cc----cccchhhhHHHHHHHHhcCCCC
Confidence 467789999999999999998 6799999999863211000 00 0000012468999999999865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc------CChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC---
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL------QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD--- 237 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~------~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~--- 237 (472)
| .++.++ ...|+|||||+|+.|.+.+-. ..-..++.|++.++.|||+.||+||||||+|||+..+
T Consensus 238 I--V~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 238 I--VRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAED 315 (475)
T ss_pred E--EEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcc
Confidence 2 222222 567999999999999886421 1234589999999999999999999999999999865
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc---CCCCcchheeccCchhhhhhhccCCcch--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD---GDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~---~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
-.+||.|||+|+..... .-+.++++++-+++|+...+ ..+..+.|+||+|+++|-.+++..++-+
T Consensus 316 ~llKItDFGlAK~~g~~----------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~ 385 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGEG----------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY 385 (475)
T ss_pred eEEEecccchhhccccc----------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc
Confidence 56899999999865311 22345677766677877643 3344577999999999988887544321
Q ss_pred ------hhhh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ------KELA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ------~~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+. -..++.+-.++|.+||.-||++|||++|-+.
T Consensus 386 ~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 386 TDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred CCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 1121 1236777789999999999999999998776
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=270.46 Aligned_cols=221 Identities=13% Similarity=0.175 Sum_probs=167.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+...||.|+||+||+|++ .++..||||.+....-. ...+..+.+|+.+|+.|.|++|
T Consensus 12 y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~--------------------~k~~e~L~~Ei~iLkel~H~nI 71 (429)
T KOG0595|consen 12 YELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN--------------------KKLVELLLSEIKILKELKHPNI 71 (429)
T ss_pred ceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC--------------------HHHHHHHHHHHHHHHhcCCcce
Confidence 45677799999999999999 56899999987532110 1123456789999999997542
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC----
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD---- 237 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~---- 237 (472)
..++++ +..|||||||.|++|..++... .+ ..++.||+.+|++||+++||||||||.||||+..
T Consensus 72 --V~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~ 149 (429)
T KOG0595|consen 72 --VRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARND 149 (429)
T ss_pred --eeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCC
Confidence 233332 7789999999999999987533 22 3488999999999999999999999999999854
Q ss_pred --CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc----
Q 012042 238 --EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL---- 311 (472)
Q Consensus 238 --g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l---- 311 (472)
-.+||+|||+|+.+... .-..+.++.+++++|++|..+.|+.|.|+||.|+++|+.++++.++-
T Consensus 150 ~~~~LKIADFGfAR~L~~~----------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 150 TSPVLKIADFGFARFLQPG----------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred CCceEEecccchhhhCCch----------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 34899999999976421 22345678899999999989999999999999999999999875432
Q ss_pred ---------hh---hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 312 ---------DK---ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 312 ---------~~---~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. ......++..+.+++..++..++.+|.+..+.
T Consensus 220 ~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 220 KELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred HHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 00 11123355555677888888887777655444
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.3e-30 Score=273.93 Aligned_cols=229 Identities=18% Similarity=0.226 Sum_probs=184.1
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
..|..++.||+|||+.||.+++ .+|+.||+|++.... ..+ . -.+....+|+++.+.|.|+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~--l~k---------~--------~~reKv~~EIeIHr~L~Hp 78 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKL--LKK---------P--------KQREKVLNEIEIHRSLKHP 78 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHH--hcC---------c--------chHHHHHHHHHHHHhcCCC
Confidence 4688899999999999999999 789999999986211 100 0 1233567899999999985
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC----ChH--HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NPD--SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~~--~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+| ..++.+ +..|||.|+|..++|.++.... .++ .++.||+.+|.|||++||||||||..||+++++.+
T Consensus 79 nI--V~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~ 156 (592)
T KOG0575|consen 79 NI--VQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMN 156 (592)
T ss_pred cE--EeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCc
Confidence 42 333332 6789999999999999886522 333 48999999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
|||.|||+|..+.. |-+.-.++++++-+++|++.....-+..+||||+|+++|.++++++++-..
T Consensus 157 VKIgDFGLAt~le~---------~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety 227 (592)
T KOG0575|consen 157 VKIGDFGLATQLEY---------DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY 227 (592)
T ss_pred EEecccceeeeecC---------cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH
Confidence 99999999986543 333344567888788898887788899999999999999999998765322
Q ss_pred -hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+ .++..|.+-+.+|.+||+++|.+|||.++-...+
T Consensus 228 ~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~ 270 (592)
T KOG0575|consen 228 NKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHP 270 (592)
T ss_pred HHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 11 2456788888999999999999999999988766
No 8
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-31 Score=271.86 Aligned_cols=232 Identities=18% Similarity=0.236 Sum_probs=175.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.+++.||.|+|++||+|+. .+++.||||++.. .+..-.++..| ..+|-.+|.+|.++
T Consensus 75 F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K---~~Iike~KvkY----------------V~~Ek~~l~~L~~h-- 133 (604)
T KOG0592|consen 75 FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDK---RYIIKEKKVKY----------------VTREKEALTQLSGH-- 133 (604)
T ss_pred cchhheeccccceeEEEeeecCCCceeeHhhhhH---HHHHhhcccch----------------hhHHHHHHHHhhCC--
Confidence 56689999999999999998 5799999998741 11111111222 23577888899532
Q ss_pred Ccceeee-------cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVD-------CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~-------~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
|.++. ....|+|+||+++|.|..++... ...-++.+|+.+|.|||.+|||||||||+|||++.++
T Consensus 134 --PgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm 211 (604)
T KOG0592|consen 134 --PGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG 211 (604)
T ss_pred --CCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC
Confidence 44443 26789999999999998876432 2344788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcc-cchh-hhccccchh--hhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 239 KVTMIDFPQMVSVSHQ-NAQM-YFDRDVECI--FKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p-~a~~-~l~rD~~~i--~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
+++|.|||.|+.+... .+.+ ....+.... ..|+++-.+++|+.+.....+..||+|+|||++|.++.+.+++-.
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 9999999999877521 1111 111112222 457888788899888899999999999999999999998765421
Q ss_pred -----hhh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -----KEL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -----~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+.| ...+|+..-.++|.|+|..+|.+|.+.++--.
T Consensus 292 eyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 292 EYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 111 24789999999999999999999999966544
No 9
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.97 E-value=8.7e-30 Score=240.66 Aligned_cols=197 Identities=55% Similarity=0.967 Sum_probs=178.1
Q ss_pred cccHHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHH
Q 012042 77 GYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAA 156 (472)
Q Consensus 77 g~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a 156 (472)
||+++.+..+...|..|.+.+.||+|+||.||+|...+|+.||||+++.+..++......++++.......|....+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (198)
T cd05144 1 GYDYLALHTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAA 80 (198)
T ss_pred CccHHHHHHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHH
Confidence 68999999999999999999999999999999998888999999999887767766666667777667777888788889
Q ss_pred HHHHHHHHHhhhCCCCcceeeecCCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 157 LKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 157 ~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
.+|+.++.++.+.++.+|.++....+++||||++|.+|..+........++.+++.++.++|..||+||||||.||+++.
T Consensus 81 ~~E~~~l~~l~~~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 81 QKEFAALKALYEEGFPVPKPIDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD 160 (198)
T ss_pred HHHHHHHHHHHHcCCCCCceeecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC
Confidence 99999999999888889999998899999999999999877543556778999999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccc
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~ 273 (472)
++.++|+|||+|....+++...++.||..|+..||.+
T Consensus 161 ~~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (198)
T cd05144 161 DEKIYIIDWPQMVSTDHPNAEELLDRDVENILRFFRR 197 (198)
T ss_pred CCcEEEEECCccccCCCccHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999975
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.6e-31 Score=257.58 Aligned_cols=216 Identities=17% Similarity=0.245 Sum_probs=172.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|+|.++||.|+||.||++.. .+|..||.|-+.-+... ...+..+.+|+.+|++|+|
T Consensus 21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md--------------------~k~rq~~v~Ei~lLkQL~H--- 77 (375)
T KOG0591|consen 21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMD--------------------AKARQDCVKEISLLKQLNH--- 77 (375)
T ss_pred HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhcc--------------------HHHHHHHHHHHHHHHhcCC---
Confidence 56678999999999999998 78999999966422111 1123456689999999998
Q ss_pred Ccceeeec--------CC-ceeEEeecCCCChhhhhcc------CChH----HHHHHHHHHHHHHHH--CC--ceeccCC
Q 012042 172 PVPNAVDC--------NR-HCVIMSLVQGYPLVQVNQL------QNPD----SVFETIIGLVVRLAE--HG--LIHCDFN 228 (472)
Q Consensus 172 ~vP~~i~~--------~~-~~LVMEyi~G~~L~~l~~~------~~~~----~i~~qIl~aL~~LH~--~G--IIHrDLK 228 (472)
|+++.+ +. .+||||||.+++|.+++.. ..|+ .++.|++.||.+||. .. |+|||||
T Consensus 78 --pNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIK 155 (375)
T KOG0591|consen 78 --PNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIK 155 (375)
T ss_pred --chHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCc
Confidence 555543 22 7899999999999998642 1333 478899999999998 45 9999999
Q ss_pred CCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccC
Q 012042 229 EFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 229 P~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
|.||+++.+|.+||.|||+++. |.++..-..+|++++|+++|+...+..|+.+|||||+|+.+|++..-.+
T Consensus 156 PaNIFl~~~gvvKLGDfGL~r~---------l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~ 226 (375)
T KOG0591|consen 156 PANIFLTANGVVKLGDFGLGRF---------LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQS 226 (375)
T ss_pred chheEEcCCCceeeccchhHhH---------hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCC
Confidence 9999999999999999999984 4555566678899999999998888999999999999999999887543
Q ss_pred Ccc-------hhhh--------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 309 GFL-------DKEL--------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 309 ~~l-------~~~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
++. ...| +...+|..+..+|..|+..+|+.||+.
T Consensus 227 PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 227 PFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred CcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 321 1112 224578899999999999999999986
No 11
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.97 E-value=1.5e-29 Score=244.24 Aligned_cols=197 Identities=27% Similarity=0.501 Sum_probs=170.4
Q ss_pred ccHHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchh-----hHHHh
Q 012042 78 YDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYN-----WLYLS 152 (472)
Q Consensus 78 ~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~-----~~~~~ 152 (472)
+....+..|..+|.+..+..+|++|+++.||+|...++..+|||+++..+..|+. .+.|+.+.+++. ...+.
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~---~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKR---IRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhh---HHHHHhcChhhhcCCCCHHHHH
Confidence 4478899999999999999999999999999998888999999999988888865 577887776654 34456
Q ss_pred HHHHHHHHHHHHHhhhCCCCcceeeecCCceeEEeecCCC--ChhhhhccC----ChHHHHHHHHHHHHHHHH-CCceec
Q 012042 153 RLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGY--PLVQVNQLQ----NPDSVFETIIGLVVRLAE-HGLIHC 225 (472)
Q Consensus 153 r~~a~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~--~L~~l~~~~----~~~~i~~qIl~aL~~LH~-~GIIHr 225 (472)
..|+.+|+.+|.++...|++||+|+.+..++||||||+.. +-..+.... .+..++.++++.+..|.. +|+||+
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHg 191 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHG 191 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccc
Confidence 7899999999999999999999999999999999999743 222222211 366789999999999976 999999
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccc
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNF 279 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~ 279 (472)
||+++|||+. ++.++|||||||+...||+|.++|.||+.|+.+||+ ++|+..
T Consensus 192 DLSEyNiL~~-~~~p~iID~~QaV~~~hp~a~e~L~RDv~Ni~~fF~-r~gv~~ 243 (268)
T COG1718 192 DLSEYNILVH-DGEPYIIDVSQAVTIDHPNAFEFLERDVRNIARFFR-RKGVEA 243 (268)
T ss_pred cchhhheEEE-CCeEEEEECccccccCCCchHHHHHHHHHHHHHHHH-HcCCCC
Confidence 9999999999 788999999999999999999999999999999996 477654
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-30 Score=256.58 Aligned_cols=227 Identities=14% Similarity=0.191 Sum_probs=173.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+++.++||+|+||+||.++. .+++.+|+|+++...- +.. -.......|..+|.+++|+ +
T Consensus 27 F~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~i-----------v~~--------~e~~~~~~Er~IL~~v~hP-F 86 (357)
T KOG0598|consen 27 FEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKI-----------VEK--------KEVRHTKAERNILSKIKHP-F 86 (357)
T ss_pred eeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHh-----------hhh--------hhHHHHHHHHHHHHhCCCC-c
Confidence 56789999999999999998 4699999999863210 000 0112356799999998774 2
Q ss_pred Ccceeeec---CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
-|.-.+.+ ...|||++|+.|+.|...++.+ .+ .-++.+|+.||.|||+.|||||||||+|||++.+|+++|
T Consensus 87 iv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~L 166 (357)
T KOG0598|consen 87 IVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKL 166 (357)
T ss_pred EeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEE
Confidence 23333333 6789999999999998877533 22 237889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---------
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--------- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--------- 313 (472)
+|||+|+..-+. -....+|++++-+++|++.....++..+|.||+|+++|+++++.+++...
T Consensus 167 tDFgL~k~~~~~---------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I 237 (357)
T KOG0598|consen 167 TDFGLCKEDLKD---------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI 237 (357)
T ss_pred eccccchhcccC---------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH
Confidence 999999854322 22334578888888898888899999999999999999999987654311
Q ss_pred ---h-hhccC-CCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---E-LAASG-FTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---~-~~~~~-~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. ....+ ++.+.+.+|.++|..+|++|--...+.++
T Consensus 238 ~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ 277 (357)
T KOG0598|consen 238 LKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEE 277 (357)
T ss_pred hcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHH
Confidence 1 22344 88899999999999999999764333333
No 13
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.96 E-value=9.8e-30 Score=239.72 Aligned_cols=171 Identities=39% Similarity=0.695 Sum_probs=134.8
Q ss_pred eEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhh----ccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeeecCC
Q 012042 106 DIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRH----RNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNR 181 (472)
Q Consensus 106 ~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~----~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~~~ 181 (472)
.||.|..++|..+|||+++.++.+|+..+..+.+... +.+..|....+.++++|+++|.+|...|+++|.|+.++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 5999999999999999999999999886655555433 345689999999999999999999999999999999999
Q ss_pred ceeEEeecC--CCChhhhhcc----CChHHHHHHHHHHHHH-HHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcc
Q 012042 182 HCVIMSLVQ--GYPLVQVNQL----QNPDSVFETIIGLVVR-LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQ 254 (472)
Q Consensus 182 ~~LVMEyi~--G~~L~~l~~~----~~~~~i~~qIl~aL~~-LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p 254 (472)
++||||||+ |.++..+... ..+..++.+++..+.. +|..|||||||++.|||++++ .++|||||+|+...||
T Consensus 81 ~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~~p 159 (188)
T PF01163_consen 81 NVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSSHP 159 (188)
T ss_dssp TEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEETTST
T ss_pred CEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceecCCc
Confidence 999999999 8888776543 3577899999996666 579999999999999999966 8999999999999999
Q ss_pred cchhhhccccchhhhhccccccc
Q 012042 255 NAQMYFDRDVECIFKFFRKRFHL 277 (472)
Q Consensus 255 ~a~~~l~rD~~~i~~~f~~~y~~ 277 (472)
+|.++|.||+.|+.+||.+.+..
T Consensus 160 ~a~~~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 160 NAEELLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp THHHHHHHHHHHHHHHHHCCC--
T ss_pred cHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999987654
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.96 E-value=7e-30 Score=249.68 Aligned_cols=228 Identities=14% Similarity=0.137 Sum_probs=172.7
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|+...++|+|++|.||+|++. +|+.||||.+..+.... ..+..|.||+++|++|+|.++
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~--------------------~VkKIAlREIrmLKqLkH~NL 63 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDP--------------------VVKKIALREIRMLKQLKHENL 63 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccH--------------------HHHHHHHHHHHHHHhcccchH
Confidence 445678999999999999994 69999999886432111 123457899999999998542
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
.+.+.. .+.+||+|||+-.-|.++-... . ...++.|++.++.|+|++++|||||||+||||+.+|.+|
T Consensus 64 --VnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvK 141 (396)
T KOG0593|consen 64 --VNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVK 141 (396)
T ss_pred --HHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEE
Confidence 222222 6789999999977666653221 2 235899999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCC-----cchh--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAG-----FLDK-- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~-----~l~~-- 313 (472)
|||||+|+.+..|.+ +-+.|++++++-+|+-.. ..+|+...|||+.|+++-++.++.+- .+|.
T Consensus 142 LCDFGFAR~L~~pgd---------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy 212 (396)
T KOG0593|consen 142 LCDFGFARTLSAPGD---------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLY 212 (396)
T ss_pred eccchhhHhhcCCcc---------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHH
Confidence 999999998776644 335677777776777654 48999999999999999888886430 0110
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDGNE 351 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~~~ 351 (472)
+..-++.+.-.-+++.+|+..+|.+|++.++...-+=+
T Consensus 213 ~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yF 287 (396)
T KOG0593|consen 213 LIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYF 287 (396)
T ss_pred HHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHH
Confidence 00113455556689999999999999999999886544
No 15
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.96 E-value=1.9e-29 Score=238.16 Aligned_cols=174 Identities=23% Similarity=0.389 Sum_probs=139.9
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhc-------cchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHR-------NSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~-------~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
.+.||+|+||.||+|.+.+|++||||+++.+..++.. ...++... ....+..+...++.+|+.+|.+|.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKD---RDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEeccccccc---HHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999888999999999876554432 11122111 1223444556677889999999999
Q ss_pred CCCCcceeeecCCceeEEeecCCCChhhh-hc-cC----ChHHHHHHHHHHHHHH-HHCCceeccCCCCcEEEcCCCcEE
Q 012042 169 HGFPVPNAVDCNRHCVIMSLVQGYPLVQV-NQ-LQ----NPDSVFETIIGLVVRL-AEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 169 ~gi~vP~~i~~~~~~LVMEyi~G~~L~~l-~~-~~----~~~~i~~qIl~aL~~L-H~~GIIHrDLKP~NILl~~~g~vk 241 (472)
.++++|.++.....+|||||++|.++... +. .. ....++.|++.+|.++ |+.||+||||||+|||++ ++.++
T Consensus 79 ~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 79 AGIPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 99888998887788999999999766433 21 11 1234788999999999 799999999999999998 57899
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccc
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~ 273 (472)
|||||+|....+|++..+|.||+.++.+||++
T Consensus 158 LiDFG~a~~~~~~~~~~~~~~d~~~~~~~f~~ 189 (190)
T cd05147 158 IIDVSQSVEHDHPHALEFLRMDCVNVNDFFRK 189 (190)
T ss_pred EEEccccccCCCcCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999975
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.7e-29 Score=259.02 Aligned_cols=228 Identities=15% Similarity=0.171 Sum_probs=170.4
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DH 169 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~ 169 (472)
-|.+++.||+|+||.|+.|.+ .+|+.||||++......-. .......+.+|+.+|+++. |+
T Consensus 18 ~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~-----------------~~~~~~~i~rEi~~~~~~~~Hp 80 (370)
T KOG0583|consen 18 KYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSK-----------------SQKLDELIKREISILRRLRSHP 80 (370)
T ss_pred ceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhccccc-----------------ccccchhhHHHHHHHHHhccCC
Confidence 477899999999999999988 5799999998753211000 0000113447999999999 54
Q ss_pred CCCcceeee----cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC-C
Q 012042 170 GFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD-E 238 (472)
Q Consensus 170 gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~-g 238 (472)
+| -+.+. ....|+||||+.|+.|.+.+... ....+|.|++.|+.|||++||+||||||+|||++.+ +
T Consensus 81 nI--~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~ 158 (370)
T KOG0583|consen 81 NI--IRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG 158 (370)
T ss_pred CE--eEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC
Confidence 32 22222 15689999999999998875332 223599999999999999999999999999999988 9
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-C-CCCcchheeccCchhhhhhhccCCcchhh--
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-G-DDGSDIDTDEGSRLSFASISKTAGFLDKE-- 314 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~-~~~~~sDiySlG~~~f~~~t~~~~~l~~~-- 314 (472)
.+||+|||++.... ++-....++.+.+.+.+|+.+.+ . ..+.+.||||+|+++|.++++..++-+..
T Consensus 159 ~~Kl~DFG~s~~~~---------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~ 229 (370)
T KOG0583|consen 159 NLKLSDFGLSAISP---------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP 229 (370)
T ss_pred CEEEeccccccccC---------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH
Confidence 99999999997542 11223445667777777776544 3 34689999999999999999876543321
Q ss_pred -----hh------ccCC-CHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 -----LA------ASGF-TRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 -----~~------~~~~-s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+. +..+ |.+.+.+|.+|+..+|..|++..+-.+
T Consensus 230 ~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 230 NLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred HHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 11 2345 899999999999999999999988774
No 17
>smart00090 RIO RIO-like kinase.
Probab=99.96 E-value=8.6e-29 Score=241.64 Aligned_cols=206 Identities=29% Similarity=0.511 Sum_probs=168.3
Q ss_pred ccCcccccccccHHHHHHHHhCCceeeecceecccCceeEEEEE-e-CCCCEEEEEEeecCcchhHHhhhhhHHhhhc--
Q 012042 68 YDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVA-R-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHR-- 143 (472)
Q Consensus 68 y~gy~lt~~g~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~-~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~-- 143 (472)
-+.|++|+.|||++++++|.++|.+|.+.++||+|+||.||+|. + .+|+.||||+++.....+.... .+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~---~~~~~~~~ 81 (237)
T smart00090 5 RATYEEVLDGRTRLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRD---RYVDGDFR 81 (237)
T ss_pred ceehhhccChHHHHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchh---hhcccchh
Confidence 35799999999999999999999999999999999999999998 3 6899999999986654332211 011000
Q ss_pred ---cchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeeecCCceeEEeecCCCChhhhh-ccC-----ChHHHHHHHHHHH
Q 012042 144 ---NSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVN-QLQ-----NPDSVFETIIGLV 214 (472)
Q Consensus 144 ---~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l~-~~~-----~~~~i~~qIl~aL 214 (472)
....+....+..+.+|+.+|.++.+.++.+|.++.....+|||||++|.+|.... ... ....++.+|+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l 161 (237)
T smart00090 82 FKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEM 161 (237)
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHH
Confidence 1123344445667899999999998888899999888899999999998876543 111 1235889999999
Q ss_pred HHHHHCC-ceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccc
Q 012042 215 VRLAEHG-LIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLN 278 (472)
Q Consensus 215 ~~LH~~G-IIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~ 278 (472)
.+||..| |+||||||.|||++ ++.++|||||.|....+|....++.||+.++..+|.+. |+.
T Consensus 162 ~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~ 224 (237)
T smart00090 162 RKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPMALEFLERDIRNIIRFFRRK-GVD 224 (237)
T ss_pred HHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCCcchHHHHHHHHHHHHHHHHHc-CCC
Confidence 9999999 99999999999999 78899999999999999998889999999999999876 443
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-28 Score=248.46 Aligned_cols=222 Identities=15% Similarity=0.229 Sum_probs=168.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
...++.||+|+||.||++.+. +|..+|||......... ...+.+|+.+|.+|.|
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~----------------------~~~l~~Ei~iL~~l~~--- 73 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT----------------------SESLEREIRILSRLNH--- 73 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchh----------------------HHHHHHHHHHHHhCCC---
Confidence 344788999999999999984 59999999875431111 1245689999999985
Q ss_pred Ccceeeec-------C--CceeEEeecCCCChhhhhccC---ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 172 PVPNAVDC-------N--RHCVIMSLVQGYPLVQVNQLQ---NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 172 ~vP~~i~~-------~--~~~LVMEyi~G~~L~~l~~~~---~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
|+++.+ . ..+|.|||++|++|.+++... .++ .+..+|+.+|.|||++|||||||||.|||++
T Consensus 74 --p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~ 151 (313)
T KOG0198|consen 74 --PNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD 151 (313)
T ss_pred --CCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe
Confidence 555543 1 488999999999999976432 233 4788999999999999999999999999999
Q ss_pred C-CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcch-
Q 012042 236 D-DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLD- 312 (472)
Q Consensus 236 ~-~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~- 312 (472)
. ++.+||+|||.++.... .. . .......+.++++.++|+.+.. ......+||||||++.+++.|+..+-.+
T Consensus 152 ~~~~~~KlaDFG~a~~~~~-~~-~----~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~ 225 (313)
T KOG0198|consen 152 PSNGDVKLADFGLAKKLES-KG-T----KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF 225 (313)
T ss_pred CCCCeEEeccCcccccccc-cc-c----cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh
Confidence 8 69999999999986542 00 0 0111223456678888887753 3444599999999999999998532111
Q ss_pred -----h----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -----K----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -----~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ...+..++.+.++.|.+|+..+|+.|||+++.++
T Consensus 226 ~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 226 FEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred cchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 0 1123457778899999999999999999999988
No 19
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96 E-value=2.2e-28 Score=247.94 Aligned_cols=217 Identities=16% Similarity=0.178 Sum_probs=162.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++... .... .....+.+|+.+|.++.|+++
T Consensus 20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~-----------------~~~~~~~~E~~~l~~l~hp~i 80 (329)
T PTZ00263 20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE--ILKM-----------------KQVQHVAQEKSILMELSHPFI 80 (329)
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--Hhhh-----------------hhHHHHHHHHHHHHhCCCCCC
Confidence 56789999999999999998 468999999986211 1000 011235679999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..|+||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 81 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 158 (329)
T PTZ00263 81 --VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVK 158 (329)
T ss_pred --CcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEE
Confidence 33333 26789999999999998765322 22 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||.+....... ..+.+...+++|+.+....++.++|+||||+++|+++++..+.... .
T Consensus 159 l~Dfg~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 226 (329)
T PTZ00263 159 VTDFGFAKKVPDRT------------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEK 226 (329)
T ss_pred EeeccCceEcCCCc------------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 99999997543211 1122333345666666677899999999999999999986543210 1
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
+ .+..++..++++|.+||..+|.+|+++
T Consensus 227 i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 227 ILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred HhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1 123478889999999999999999985
No 20
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.2e-28 Score=245.87 Aligned_cols=208 Identities=24% Similarity=0.449 Sum_probs=173.5
Q ss_pred HHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchh-------hHHHh
Q 012042 80 FLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYN-------WLYLS 152 (472)
Q Consensus 80 ~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~-------~~~~~ 152 (472)
..-|..|+.+|++..|.++|..|+++.||.|...+|..+|||+++.+--.| +....|+.+.-+|. ...+.
T Consensus 133 rmvLfrll~RG~i~~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvF---KDRdRYV~GEfRFRhgyck~NPRKMV 209 (520)
T KOG2270|consen 133 RMVLFRLLNRGVIVEINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVF---KDRDRYVSGEFRFRHGYCKHNPRKMV 209 (520)
T ss_pred HHHHHHHHhcCeeeecccccccCccceeEeeecCCCceEEEEEEeeeEEEE---echhhhccceeeeecccccCCcHHHH
Confidence 456789999999999999999999999999998999999999997554444 56777887765543 45688
Q ss_pred HHHHHHHHHHHHHhhhCCCCcceeeecCCceeEEeecCC--CChhhhhcc----CChHHHHHHHHHHHHHH-HHCCceec
Q 012042 153 RLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQG--YPLVQVNQL----QNPDSVFETIIGLVVRL-AEHGLIHC 225 (472)
Q Consensus 153 r~~a~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G--~~L~~l~~~----~~~~~i~~qIl~aL~~L-H~~GIIHr 225 (472)
+.||++|+++|.+|+..|||+|.|+....|+|||+||.+ .+-..+... .....++.+++..|..| +.+++||.
T Consensus 210 k~WAEKE~RNLkRl~~aGIP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHA 289 (520)
T KOG2270|consen 210 KTWAEKEMRNLKRLNNAGIPCPEPILLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHA 289 (520)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceeeecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceecc
Confidence 999999999999999999999999999999999999974 222222211 13456888999999988 57899999
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
||+.+|+|+. +|.++|||.+|++..+||+|..+|..|+.|+..||.+ .|++.- -+..+|+.++
T Consensus 290 DLSEfN~Lyh-dG~lyiIDVSQSVE~DHP~aldFLRmDc~NVn~FF~r-~gv~v~---------------t~r~LFefI~ 352 (520)
T KOG2270|consen 290 DLSEFNLLYH-DGKLYIIDVSQSVEHDHPHALDFLRMDCNNVNDFFRR-LGVAVM---------------TVRELFEFIT 352 (520)
T ss_pred chhhhhheEE-CCEEEEEEccccccCCChhHHHHHHHHHHHHHHHHHH-cCCeee---------------cHHHHHHHhh
Confidence 9999999997 5789999999999999999999999999999999975 455432 1456799988
Q ss_pred cc
Q 012042 306 KT 307 (472)
Q Consensus 306 ~~ 307 (472)
..
T Consensus 353 d~ 354 (520)
T KOG2270|consen 353 DP 354 (520)
T ss_pred cc
Confidence 64
No 21
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.96 E-value=1.7e-28 Score=247.90 Aligned_cols=218 Identities=14% Similarity=0.141 Sum_probs=158.4
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
+.||+|+||.||+|.+ .+|+.||||+++....... . ......+|+.+|.++.|+++....
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-----~--------------~~~~~~~e~~~l~~l~hp~i~~~~ 61 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAK-----D--------------EVAHTLTESRVLQNTRHPFLTALK 61 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-----H--------------HHHHHHHHHHHHHhCCCCCCCCEE
Confidence 3689999999999998 5799999999863210000 0 011345799999999887642221
Q ss_pred -ee-ecCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 176 -AV-DCNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 176 -~i-~~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
.+ ..+..||||||++|++|...+... . ...++.||+.+|.|||++||+||||||.|||++.++.++|+|||+
T Consensus 62 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 141 (323)
T cd05571 62 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGL 141 (323)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 11 126689999999999998765322 1 124778999999999999999999999999999999999999999
Q ss_pred ceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h------
Q 012042 248 MVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E------ 314 (472)
Q Consensus 248 A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~------ 314 (472)
+....... .....+.+...+++|+.+....++.++|+||||+++++++++..+.... .
T Consensus 142 a~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~ 212 (323)
T cd05571 142 CKEGISDG---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 212 (323)
T ss_pred CcccccCC---------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC
Confidence 86432111 1111233444445666656678899999999999999999986443210 0
Q ss_pred hhccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 315 LAASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 315 ~~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
..+..++.++.++|.+||..+|++||+.
T Consensus 213 ~~p~~~~~~~~~li~~~L~~dP~~R~~~ 240 (323)
T cd05571 213 RFPRTLSPEAKSLLAGLLKKDPKQRLGG 240 (323)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence 1134688899999999999999999953
No 22
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=3.9e-28 Score=245.91 Aligned_cols=223 Identities=15% Similarity=0.135 Sum_probs=164.7
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++... .... .....+.+|+.+|..+.|+++
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~-----------------~~~~~~~~e~~~l~~~~h~~i 63 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSL--LFKL-----------------NEVRHVLTERDILTTTKSEWL 63 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHH--Hhhh-----------------hHHHHHHHHHHHHHhCCCCCC
Confidence 567899999999999999984 68999999986321 0000 001234579999999987654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..||||||++|++|..++... . ...++.||+.+|.+||++||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 141 (333)
T cd05600 64 --VKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIK 141 (333)
T ss_pred --ccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEE
Confidence 33333 25689999999999999876422 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----h---h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----K---E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~---~ 314 (472)
|+|||++..... ......+...+++|+.+....++.++||||||+++++++++..+... . .
T Consensus 142 L~Dfg~a~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~ 209 (333)
T cd05600 142 LTDFGLSKGIVT------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN 209 (333)
T ss_pred EEeCcCCccccc------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHH
Confidence 999999875422 11122333334466655667899999999999999999997643210 0 0
Q ss_pred h-------h-c------cCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 315 L-------A-A------SGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 315 ~-------~-~------~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
+ . + ..++.++.++|.+|+..+|.+||+.++...-
T Consensus 210 i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 210 LKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0 0 0 1457888999999999999999998776653
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.95 E-value=2.4e-28 Score=247.39 Aligned_cols=224 Identities=16% Similarity=0.112 Sum_probs=157.1
Q ss_pred eeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++.... ... ...+.+|+.+|.++
T Consensus 9 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~--------------------~~~~~~E~~~l~~l 67 (338)
T cd05102 9 LRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASE--------------------HKALMSELKILIHI 67 (338)
T ss_pred ceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHH--------------------HHHHHHHHHHHHHh
Confidence 56789999999999999974 2357899998863321 100 11356799999999
Q ss_pred -hhCCCCcceeeec-----CCceeEEeecCCCChhhhhccCC--------------------------------------
Q 012042 167 -EDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQN-------------------------------------- 202 (472)
Q Consensus 167 -~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~~-------------------------------------- 202 (472)
.|+++ +..++. +..+++|||++|++|..++....
T Consensus 68 ~~h~ni--v~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (338)
T cd05102 68 GNHLNV--VNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVL 145 (338)
T ss_pred ccCcce--eeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcc
Confidence 55442 333332 34789999999999987653210
Q ss_pred ------------------------------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecC
Q 012042 203 ------------------------------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVS 252 (472)
Q Consensus 203 ------------------------------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~ 252 (472)
...++.||+.+|.|||+.||+||||||.|||++.++.++|+|||++....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~ 225 (338)
T cd05102 146 FSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY 225 (338)
T ss_pred ccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccc
Confidence 01367799999999999999999999999999999999999999997543
Q ss_pred cccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcc----h----hhh-------h
Q 012042 253 HQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL----D----KEL-------A 316 (472)
Q Consensus 253 ~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l----~----~~~-------~ 316 (472)
.... ... .........+++|+.+....++.++||||||+++|++++ +..+.. . ..+ .
T Consensus 226 ~~~~--~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 298 (338)
T cd05102 226 KDPD--YVR-----KGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA 298 (338)
T ss_pred cCcc--hhc-----ccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC
Confidence 2111 000 000011112335555556788999999999999999886 432211 0 001 1
Q ss_pred ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 317 ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 317 ~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
....+..+..+|.+|+..+|++|||..+..
T Consensus 299 ~~~~~~~l~~li~~cl~~dp~~RPs~~el~ 328 (338)
T cd05102 299 PENATPEIYRIMLACWQGDPKERPTFSALV 328 (338)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 235677899999999999999999987654
No 24
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.95 E-value=2.3e-28 Score=242.98 Aligned_cols=216 Identities=13% Similarity=0.094 Sum_probs=160.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+ ....+.+|+.+|.++.|+++
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~-----------------~~~~~~~E~~~l~~l~hp~i 63 (291)
T cd05612 3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPE--VIRLK-----------------QEQHVHNEKRVLKEVSHPFI 63 (291)
T ss_pred ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHH--HhhhH-----------------HHHHHHHHHHHHHhCCCCcH
Confidence 456789999999999999984 79999999885321 10000 01235679999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..++||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~k 141 (291)
T cd05612 64 --IRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIK 141 (291)
T ss_pred --hhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence 33332 25689999999999998875322 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||++...... .....+.....+|+......++.++||||||+++++++++..+.... .
T Consensus 142 l~Dfg~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~ 209 (291)
T cd05612 142 LTDFGFAKKLRDR------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEK 209 (291)
T ss_pred EEecCcchhccCC------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999998754211 01122333345666556677899999999999999999976432110 0
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
+ .+..++..++++|.+||..+|.+|++
T Consensus 210 i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 210 ILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred HHhCCcCCCccCCHHHHHHHHHHcCCCHHHccC
Confidence 1 12456788899999999999999997
No 25
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95 E-value=4.3e-28 Score=243.69 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=156.5
Q ss_pred ecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||+|+||.||+|.+. +++.||||+++....... .....+.+|+.+|.++.|+++ +.++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~-------------------~~~~~~~~E~~~l~~l~h~~i--v~~~ 59 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSR-------------------SEVTHTLAERTVLAQVNCPFI--VPLK 59 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-------------------hHHHHHHHHHHHHHhCCCCcE--ecee
Confidence 799999999999984 689999998862210000 001234579999999987653 2222
Q ss_pred e----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 178 D----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 178 ~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
. .+..++||||++|++|...+... . ...++.||+.+|.|||++||+||||||.|||++.++.++|+|||+
T Consensus 60 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~ 139 (312)
T cd05585 60 FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGL 139 (312)
T ss_pred eEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcc
Confidence 2 26789999999999998865322 1 124788999999999999999999999999999999999999999
Q ss_pred ceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh-----
Q 012042 248 MVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL----- 315 (472)
Q Consensus 248 A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~----- 315 (472)
+....... .....+.+...+++|+.+....++.++|+||||+++|+++++..+.... .+
T Consensus 140 ~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~ 210 (312)
T cd05585 140 CKLNMKDD---------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL 210 (312)
T ss_pred cccCccCC---------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC
Confidence 87432111 1111223333444666556677899999999999999999986543210 01
Q ss_pred -hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 316 -AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 316 -~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
....++.++.++|.+||..+|++||+.
T Consensus 211 ~~~~~~~~~~~~li~~~L~~dp~~R~~~ 238 (312)
T cd05585 211 RFPDGFDRDAKDLLIGLLSRDPTRRLGY 238 (312)
T ss_pred CCCCcCCHHHHHHHHHHcCCCHHHcCCC
Confidence 134678899999999999999999875
No 26
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.95 E-value=5.9e-28 Score=239.14 Aligned_cols=221 Identities=13% Similarity=0.092 Sum_probs=159.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||.+.... ..... ....+.+|+.+|.++.|+++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~-----------------~~~~~~~E~~il~~l~~~~i 62 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR--IKKRK-----------------GEAMALNEKRILEKVNSRFV 62 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhh--hhhhh-----------------hHHHHHHHHHHHHhcCCCcE
Confidence 35568899999999999998 579999999875321 10000 01134579999999987643
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc----CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL----QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~----~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
...+. .+..++||||++|++|...+.. ..+ ..++.|++.+|.|||+.||+||||||.|||++.++.
T Consensus 63 --v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~ 140 (285)
T cd05631 63 --VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGH 140 (285)
T ss_pred --EEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC
Confidence 22222 2568999999999999765421 111 236789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
++|+|||++....... ......+....++|+......++.++||||||+++|+++++..+...
T Consensus 141 ~kl~Dfg~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~ 210 (285)
T cd05631 141 IRISDLGLAVQIPEGE----------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR 210 (285)
T ss_pred EEEeeCCCcEEcCCCC----------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH
Confidence 9999999997542110 01111223233455555667899999999999999999997643211
Q ss_pred ----hhh------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 ----KEL------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 ----~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
..+ ....++..+..+|.+||..+|++|++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05631 211 EEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRG 252 (285)
T ss_pred HHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCC
Confidence 001 12458889999999999999999998544
No 27
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-29 Score=252.91 Aligned_cols=224 Identities=13% Similarity=0.134 Sum_probs=177.1
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
..|.....||+|+||.||+|.+ .+++.||||++........ -...++|+.+|..+.+.
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de---------------------Iediqqei~~Ls~~~~~ 71 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE---------------------IEDIQQEISVLSQCDSP 71 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchh---------------------hHHHHHHHHHHHhcCcc
Confidence 3455568999999999999999 6799999999975432211 12356899999999864
Q ss_pred CCCcceee----ecCCceeEEeecCCCChhhhhccCCh------HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 170 GFPVPNAV----DCNRHCVIMSLVQGYPLVQVNQLQNP------DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 170 gi~vP~~i----~~~~~~LVMEyi~G~~L~~l~~~~~~------~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
++ -+-+ .-...+++||||.|+.+..++....+ .-++++++.++.|+|..+.+|||||+.|||+..+|.
T Consensus 72 ~i--t~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~ 149 (467)
T KOG0201|consen 72 NI--TEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGD 149 (467)
T ss_pred hH--HhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCc
Confidence 32 1111 22678999999999999888765433 137899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
++|+|||.+..++.. ..--.+|++++|.++|++.....|+.+.||||||.+.+++.++.++.-+.
T Consensus 150 vkl~DfgVa~ql~~~---------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl 220 (467)
T KOG0201|consen 150 VKLADFGVAGQLTNT---------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL 220 (467)
T ss_pred EEEEecceeeeeech---------hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE
Confidence 999999999866422 11225789999999999877789999999999999999999986532111
Q ss_pred --------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+...||+-+++.++.||+.+|+.|||+.+.+
T Consensus 221 flIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LL 261 (467)
T KOG0201|consen 221 FLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELL 261 (467)
T ss_pred EeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 112247999999999999999999999998764
No 28
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95 E-value=5.8e-28 Score=243.94 Aligned_cols=223 Identities=13% Similarity=0.071 Sum_probs=160.0
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||+++....... ........|..++..+.++.+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~~~~~~~ 62 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQD-------------------DDVECTMVEKRVLALPGKPPF 62 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhh-------------------hHHHHHHHHHHHHHhcCCCCc
Confidence 467789999999999999984 688999999863210000 001134468888888876532
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
++.... .+..|+||||++|++|...+... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 63 -i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 141 (324)
T cd05587 63 -LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIK 141 (324)
T ss_pred -eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEE
Confidence 233322 25689999999999998765321 1 123778999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h----h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K----E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~----~ 314 (472)
|+|||++........ ....+.+...+.+|+.+....++.++|+||+|+++|+++++..+... . .
T Consensus 142 L~Dfg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~ 212 (324)
T cd05587 142 IADFGMCKENIFGGK---------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS 212 (324)
T ss_pred EeecCcceecCCCCC---------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999864321110 01112233333455555667789999999999999999998654311 0 0
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
+ .+..++.++.++|.+|+..+|.+|++...
T Consensus 213 i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 248 (324)
T cd05587 213 IMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGP 248 (324)
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCC
Confidence 1 13467888999999999999999998754
No 29
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-28 Score=255.18 Aligned_cols=224 Identities=17% Similarity=0.237 Sum_probs=178.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|..-..||+|+.|.||.|.. .+++.||||.+......- +..+..|+.+|+.++|.++
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~----------------------keLilnEi~Vm~~~~H~Ni 332 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK----------------------KELLLNEILVMRDLHHPNI 332 (550)
T ss_pred hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc----------------------hhhhHHHHHHHHhccchHH
Confidence 44457899999999999988 578999999986543211 1234579999999987542
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
.+.+. .+..|+||||++|++|.++.... ....++++++.||.|||..||||||||..|||++.+|.+||
T Consensus 333 --Vnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKl 410 (550)
T KOG0578|consen 333 --VNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKL 410 (550)
T ss_pred --HHHHHHhcccceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEE
Confidence 22221 16789999999999999886432 23458999999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc-hhhhh-----
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL-DKELA----- 316 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l-~~~~~----- 316 (472)
+|||+|..+.... ..-.+.++++|.++|+......|+.+.||||||....|++.+.++.+ +..+.
T Consensus 411 tDFGFcaqi~~~~---------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI 481 (550)
T KOG0578|consen 411 TDFGFCAQISEEQ---------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 481 (550)
T ss_pred eeeeeeecccccc---------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence 9999998664321 12345788999999999888999999999999999999999876654 22111
Q ss_pred ----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 317 ----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 317 ----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
...+|..+++.|.+||..++++|+|+.|+++--
T Consensus 482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence 234899999999999999999999999998743
No 30
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.95 E-value=5.3e-28 Score=238.34 Aligned_cols=224 Identities=11% Similarity=0.133 Sum_probs=161.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|++. +++.||||+++.....-. ....+.+|+.++.++.|+++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 62 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE--------------------VKETTLRELKMLRTLKQENI 62 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccccc--------------------chhhHHHHHHHHHhCCCccc
Confidence 567899999999999999994 689999999864321100 01234579999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..++. .+..++||||++++.+..+.... . ...++.||+.+|.|||+.||+||||||.|||++.++.++
T Consensus 63 --v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~k 140 (287)
T cd07848 63 --VELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLK 140 (287)
T ss_pred --cchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 22222 25679999999998776554321 1 234789999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---h----
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---E---- 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---~---- 314 (472)
|+|||.+........ .....+.+.....+|+......++.++|+||||+++++++++...+... .
T Consensus 141 l~Dfg~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (287)
T cd07848 141 LCDFGFARNLSEGSN--------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT 212 (287)
T ss_pred EeeccCccccccccc--------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999976532211 0111223333344555555677899999999999999999876422100 0
Q ss_pred h--------------------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 L--------------------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 ~--------------------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+ ....++..+.++|.+||..+|++|||+++-.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 213 IQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred HHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0 0012577789999999999999999987644
No 31
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=1.5e-28 Score=254.47 Aligned_cols=221 Identities=20% Similarity=0.232 Sum_probs=180.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.++.+++ .++..+|+|.++..+.+-+. +..|.+|+.++.++.|
T Consensus 6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~--------------------r~~A~~E~~lis~~~h--- 62 (426)
T KOG0589|consen 6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE--------------------RRSAIQEMDLLSKLLH--- 62 (426)
T ss_pred hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh--------------------hHHHHHHHHHHHhccC---
Confidence 56678999999999999988 46889999998865543321 2257899999999987
Q ss_pred Ccceeeec-------CC-ceeEEeecCCCChhhhhccC----ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 172 PVPNAVDC-------NR-HCVIMSLVQGYPLVQVNQLQ----NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 172 ~vP~~i~~-------~~-~~LVMEyi~G~~L~~l~~~~----~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
|+++.+ +. .+|||+||+|++|.+.+... .++ .++.|++.++.|||+.+|+|||||+.||+++
T Consensus 63 --P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt 140 (426)
T KOG0589|consen 63 --PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT 140 (426)
T ss_pred --CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc
Confidence 666654 44 79999999999999976432 233 4889999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc----c
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF----L 311 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~----l 311 (472)
.++.|+|.|||+|+.+..+ ..-..++.+++|++.|+.+.+..|+.++||||||+.+|++.+-+..+ +
T Consensus 141 k~~~VkLgDfGlaK~l~~~---------~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m 211 (426)
T KOG0589|consen 141 KDKKVKLGDFGLAKILNPE---------DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM 211 (426)
T ss_pred ccCceeecchhhhhhcCCc---------hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence 9999999999999866543 22334567888999999999999999999999999999999854322 1
Q ss_pred h----h------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 D----K------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ~----~------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. + ...+++++.+++-+|..|+..+|+.||++.+.+-
T Consensus 212 ~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 212 SELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred HHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhh
Confidence 0 0 1135789999999999999999999999998765
No 32
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95 E-value=1.1e-27 Score=243.02 Aligned_cols=215 Identities=16% Similarity=0.130 Sum_probs=156.9
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
+.||+|+||.||+|.+ .+|+.||||+++.....- . .......+|+.+|..+.|+++ +.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~--------------~~~~~~~~E~~~l~~l~hp~i--v~ 59 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-----K--------------DEVAHTLTESRVLKNTRHPFL--TS 59 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----h--------------hHHHHHHHHHHHHHhCCCCCC--cc
Confidence 3689999999999998 479999999986321000 0 001234578999999988654 22
Q ss_pred eee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 176 AVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 176 ~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
++. .+..||||||++|++|...+... . ...++.||+.+|.|||++||+||||||.|||++.++.++|+||
T Consensus 60 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~Df 139 (328)
T cd05593 60 LKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDF 139 (328)
T ss_pred eEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecC
Confidence 222 26689999999999997765322 1 2247889999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h----
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E---- 314 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~---- 314 (472)
|++...... ......+.+...+++|+......++.++|+||||+++++++++..+.... .
T Consensus 140 G~~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~ 210 (328)
T cd05593 140 GLCKEGITD---------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 210 (328)
T ss_pred cCCccCCCc---------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC
Confidence 998743211 11112233343444666555678899999999999999999976543110 0
Q ss_pred --hhccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 315 --LAASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 315 --~~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
..+..++.++..+|.+||..+|++|++
T Consensus 211 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 239 (328)
T cd05593 211 DIKFPRTLSADAKSLLSGLLIKDPNKRLG 239 (328)
T ss_pred CccCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence 113467889999999999999999984
No 33
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.95 E-value=9.2e-28 Score=226.03 Aligned_cols=176 Identities=28% Similarity=0.478 Sum_probs=140.6
Q ss_pred ecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhcc-------chhhHHHhHHHHHHHHHHHHHhh
Q 012042 95 VGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRN-------SYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~-------~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+.+.||+|+||.||+|.+.+|+.||||+++.+...+... ..++.... ...+......+..+|+.++.++.
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDR---DKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeH---HHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999998889999999998764433211 11111110 12344445567789999999999
Q ss_pred hCCCCcceeeecCCceeEEeecCCCChhhh-hc-cC----ChHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcE
Q 012042 168 DHGFPVPNAVDCNRHCVIMSLVQGYPLVQV-NQ-LQ----NPDSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 168 ~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l-~~-~~----~~~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++.+|.++.....+|||||++|.++... +. .. ....++.+++.++.+||. .||+||||||.|||++ ++.+
T Consensus 78 ~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 78 EAGVPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred hCCCCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence 999999999888778999999998754322 21 11 223588999999999999 9999999999999998 7899
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccc
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKR 274 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~ 274 (472)
+|+|||+|+...+|++..++.||+.++.+||+++
T Consensus 157 ~liDFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (190)
T cd05145 157 YIIDVSQAVELDHPNALEFLRRDIRNINRFFRKK 190 (190)
T ss_pred EEEEcccceecCCCCHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999864
No 34
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95 E-value=9.1e-28 Score=242.86 Aligned_cols=216 Identities=14% Similarity=0.138 Sum_probs=157.5
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
+.||+|+||.||+|.+ .+|..||+|+++....... .......+|+.+|.++.|+++ +.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~hp~i--~~ 59 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------------------DEVAHTVTESRVLQNTRHPFL--TA 59 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-------------------HHHHHHHHHHHHHHhCCCCCC--cc
Confidence 3689999999999998 5799999999863210000 001134568999999988653 23
Q ss_pred eee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 176 AVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 176 ~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
++. .+..||||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++|+||
T Consensus 60 ~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Df 139 (323)
T cd05595 60 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 139 (323)
T ss_pred eeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEeccc
Confidence 222 26689999999999997765322 11 247789999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh---
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL--- 315 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~--- 315 (472)
|++....... .....+.+...+++|+......++.++|+||||+++++++++..+.... .+
T Consensus 140 g~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 210 (323)
T cd05595 140 GLCKEGISDG---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 210 (323)
T ss_pred HHhccccCCC---------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Confidence 9986432111 1111233444445666556678899999999999999999976432110 01
Q ss_pred ---hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 316 ---AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 316 ---~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.+..++.+++++|.+|+..+|++|++.
T Consensus 211 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 240 (323)
T cd05595 211 EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 240 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCHHHhCCC
Confidence 134678899999999999999999843
No 35
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95 E-value=6e-28 Score=246.89 Aligned_cols=222 Identities=14% Similarity=0.107 Sum_probs=160.7
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
+.+.||+|+||.||+|.+ .+|+.||||++....... ....+.+|+.+|.++.|.++
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i-- 134 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDT---------------------VRRQICREIEILRDVNHPNV-- 134 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHH---------------------HHHHHHHHHHHHHhCCCCCc--
Confidence 457899999999999998 479999999985322110 01235679999999988664
Q ss_pred ceeeec----CCceeEEeecCCCChhhhhccC--ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 174 PNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 174 P~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
..+++. +..++||||++|++|....... ....++.+|+.+|.|||++||+||||||.|||++.++.++|+|||+
T Consensus 135 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~ 214 (353)
T PLN00034 135 VKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGV 214 (353)
T ss_pred ceeeeEeccCCeEEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccccc
Confidence 333332 5688999999999986543222 2235889999999999999999999999999999999999999999
Q ss_pred ceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhhccCCcc-----hh----
Q 012042 248 MVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASISKTAGFL-----DK---- 313 (472)
Q Consensus 248 A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t~~~~~l-----~~---- 313 (472)
+........ ......+...+++|+.+. +...+.++||||||+++|+++++...+. ++
T Consensus 215 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~ 285 (353)
T PLN00034 215 SRILAQTMD---------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM 285 (353)
T ss_pred ceecccccc---------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH
Confidence 976532111 011122333334555431 2334568999999999999998754321 10
Q ss_pred --------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 --------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 --------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++.++.++|.+|+..+|++||++.|...-
T Consensus 286 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 286 CAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00134578899999999999999999999887764
No 36
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.95 E-value=7.1e-28 Score=242.90 Aligned_cols=230 Identities=13% Similarity=0.118 Sum_probs=160.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|..||||.++........ ...+.+|+.+|.++.|+++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~hpni 61 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSD--------------------ATRILREIKLLRLLRHPDI 61 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchh--------------------HHHHHHHHHHHHhCCCCCE
Confidence 67789999999999999998 47999999987522110000 1134579999999988653
Q ss_pred Ccc-eeee------cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVP-NAVD------CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP-~~i~------~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
... .++. ....|+||||+++ +|.+++... . ...++.||+.+|.|||++||+||||||.|||++.++
T Consensus 62 v~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~ 140 (338)
T cd07859 62 VEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC 140 (338)
T ss_pred eeecceEeccCCCCCceEEEEEecCCC-CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 211 1111 1347999999964 676654321 1 124788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--CCCCcchheeccCchhhhhhhccCCcchhh--
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLDKE-- 314 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~~~-- 314 (472)
.++|+|||++............ ...+.+...+.+|+.... ..++.++||||||+++++++++...+....
T Consensus 141 ~~kL~Dfg~~~~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~ 214 (338)
T cd07859 141 KLKICDFGLARVAFNDTPTAIF------WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 214 (338)
T ss_pred cEEEccCccccccccccCcccc------ccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH
Confidence 9999999999754322111100 011233333445554332 578999999999999999999754321000
Q ss_pred ------------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 315 ------------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 315 ------------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
....+++..+.++|.+|+..+|++||++++-....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 215 HQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 00124567778999999999999999998887654
No 37
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5e-28 Score=246.64 Aligned_cols=230 Identities=17% Similarity=0.151 Sum_probs=177.1
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|++...||.|..++||+|+. +.+..||||++....-.- + -..+++|+..|..+.|++
T Consensus 27 ~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--------~-------------ld~l~kE~~~msl~~HPN 85 (516)
T KOG0582|consen 27 DYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--------D-------------LDALRKEVQTMSLIDHPN 85 (516)
T ss_pred ceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--------h-------------HHHHHHHHHHhhhcCCCC
Confidence 478889999999999999998 789999999987542110 0 124568999999998865
Q ss_pred CCcce--eeecCCceeEEeecCCCChhhhhccC--------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPN--AVDCNRHCVIMSLVQGYPLVQVNQLQ--------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~--~i~~~~~~LVMEyi~G~~L~~l~~~~--------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
|.... ++.-...|+||.|+.++++.+++... ....++++++.+|.|||++|.||||+|+.||||+.+|.|
T Consensus 86 Iv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~V 165 (516)
T KOG0582|consen 86 IVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTV 165 (516)
T ss_pred cceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcE
Confidence 32111 22236789999999999999886422 123488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc--ccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET--TDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~--~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
+|.|||.+..+-+.. .|-.....+|.+..|.++|+.. .-.-|+.|+||||||.+..|+.++..++-+-
T Consensus 166 kLadFgvsa~l~~~G-----~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv 240 (516)
T KOG0582|consen 166 KLADFGVSASLFDSG-----DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV 240 (516)
T ss_pred EEcCceeeeeecccC-----ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH
Confidence 999999988776533 1222223456677788888863 3467999999999999999999875432110
Q ss_pred ------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.-....|++.+++.|..||..+|.+|||+++...
T Consensus 241 Ll~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 241 LLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred HHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0112458888999999999999999999999876
No 38
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.95 E-value=1e-27 Score=241.33 Aligned_cols=218 Identities=14% Similarity=0.163 Sum_probs=159.2
Q ss_pred ceecccCceeEEEEEe----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 97 RQLGVGKESDIFEVAR----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.||+|+||.||++.. .+|+.||||+++....... ......+|+.+|.++.|+++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~ni- 60 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVR--------------------DRVRTKMERDILAEVNHPFI- 60 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhh--------------------hHHHHHHHHHHHHhCCCCCc-
Confidence 5799999999999976 2588999999863211000 01234579999999988764
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.++. .+..|+||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++|
T Consensus 61 -v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL 139 (318)
T cd05582 61 -VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 139 (318)
T ss_pred -ccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEE
Confidence 33333 25689999999999998765322 12 247889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------hhh
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KEL 315 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~ 315 (472)
+|||++........ ....+.+....++|+......++.++|+||||+++++++++..+... ..+
T Consensus 140 ~Dfg~~~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 140 TDFGLSKESIDHEK---------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred eeccCCcccCCCCC---------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 99999875432211 11112233333455555566788999999999999999997643211 001
Q ss_pred ------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 316 ------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 316 ------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+..++..+..+|.+|++.+|++||++.++
T Consensus 211 ~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~ 246 (318)
T cd05582 211 LKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPD 246 (318)
T ss_pred HcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCC
Confidence 123578889999999999999999998874
No 39
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.95 E-value=1.3e-27 Score=241.46 Aligned_cols=215 Identities=15% Similarity=0.156 Sum_probs=156.0
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
+.||+|+||.||+|.+ .+|+.||||+++... ... .. ......+|+.++..+.|+++ +.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~--~~~---~~--------------~~~~~~~e~~~l~~~~hp~i--~~ 59 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEV--IVA---KD--------------EVAHTLTENRVLQNSRHPFL--TA 59 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH--hhh---hh--------------HHHHHHHHHHHHHhCCCCCC--Cc
Confidence 3689999999999998 579999999986321 000 00 01133468889999988754 33
Q ss_pred eee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcEEEEe
Q 012042 176 AVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 176 ~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
++. .+..||||||++|++|...+... .+ ..++.||+.+|.|||+ .||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~D 139 (325)
T cd05594 60 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITD 139 (325)
T ss_pred eEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEec
Confidence 322 25689999999999998765322 12 2477899999999997 7999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~-- 315 (472)
||++....... .....+.+...+++|+......++.++|+||||+++++++++..+.... .+
T Consensus 140 fg~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~ 210 (325)
T cd05594 140 FGLCKEGIKDG---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 210 (325)
T ss_pred CCCCeecCCCC---------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc
Confidence 99987432111 1111223333344566556678899999999999999999976443110 00
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
.+..++.++..+|.+||+.+|++|++
T Consensus 211 ~~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 240 (325)
T cd05594 211 EEIRFPRTLSPEAKSLLSGLLKKDPKQRLG 240 (325)
T ss_pred CCCCCCCCCCHHHHHHHHHHhhcCHHHhCC
Confidence 13468899999999999999999984
No 40
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.95 E-value=7.7e-28 Score=238.69 Aligned_cols=221 Identities=13% Similarity=0.108 Sum_probs=157.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .+++.||||+++.....-. ...+.+|+.+|.++.|+++
T Consensus 7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~h~ni 65 (288)
T cd07871 7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA---------------------PCTAIREVSLLKNLKHANI 65 (288)
T ss_pred ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc---------------------chhHHHHHHHHHhCCCCCE
Confidence 66779999999999999998 4789999998864321100 0124579999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc-C--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL-Q--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~-~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++. +..++||||++| +|...+.. . . ...++.||+.+|.+||++||+||||||.|||++.++.+
T Consensus 66 --v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~ 142 (288)
T cd07871 66 --VTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGEL 142 (288)
T ss_pred --eeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCE
Confidence 333332 457899999987 67665422 1 1 13478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh----h-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK----E- 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----~- 314 (472)
+|+|||.+.....+.. ............+|+.+. ...++.++|+||+|+++++++++...+... .
T Consensus 143 kl~DfG~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~ 213 (288)
T cd07871 143 KLADFGLARAKSVPTK---------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEEL 213 (288)
T ss_pred EECcCcceeeccCCCc---------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999999875432211 011112233334555443 356889999999999999999875322100 0
Q ss_pred --------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 --------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 --------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......+.+..++|.+||..+|.+|||+++-.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 214 HLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred HHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00124567788999999999999999987643
No 41
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.95 E-value=1.6e-27 Score=240.71 Aligned_cols=223 Identities=14% Similarity=0.104 Sum_probs=158.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH---HHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM---KALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L---~~L~~ 168 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++....... . ....+.+|..++ .++.|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~--~-----------------~~~~l~~e~~~~~~~~~l~h 61 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR--D-----------------EVESLMCEKRIFETANSERH 61 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh--h-----------------HHHHHHHHHHHHHhccccCC
Confidence 45678999999999999988 5799999999863210000 0 001233455554 44555
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+++ +.+++ .+..|+||||++|++|...+... ....++.+|+.+|.|||+.||+||||||.|||++.++.
T Consensus 62 p~i--~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~ 139 (324)
T cd05589 62 PFL--VNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGF 139 (324)
T ss_pred CCh--hceeeEEEcCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCc
Confidence 442 33333 26689999999999998765432 12247899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h---
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K--- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~--- 313 (472)
++|+|||.+........ ....+.+...+++|+.+....++.++|+||||+++|+++++..+... .
T Consensus 140 ~kL~Dfg~~~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 140 VKIADFGLCKEGMGFGD---------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred EEeCcccCCccCCCCCC---------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999864321111 11122333344566655677889999999999999999997643211 0
Q ss_pred -hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ .+..++..+..+|.+||..+|.+||++.+.
T Consensus 211 ~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 249 (324)
T cd05589 211 DSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEK 249 (324)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCC
Confidence 01 124578889999999999999999987664
No 42
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.95 E-value=1.7e-27 Score=240.47 Aligned_cols=220 Identities=12% Similarity=0.118 Sum_probs=155.5
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHH-HHHHhhhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFA-FMKALEDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~-~L~~L~~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+|+.||||++........ . .......|.. ++..+.|+++ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~--------------~~~~~~~e~~~~~~~l~hp~i--v 59 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK-----K--------------EQKHIMAERNVLLKNVKHPFL--V 59 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh-----h--------------HHHHHHHHHHHHHhhCCCCCC--C
Confidence 3689999999999999 4799999999863210000 0 0011223433 4566777653 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.++. .+..|+||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~D 139 (323)
T cd05575 60 GLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTD 139 (323)
T ss_pred CeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEec
Confidence 3322 25689999999999998765322 12 23788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~-- 315 (472)
||++.....+.. ....+.+....++|+.+....++.++|+||||+++|+++++..+.... .+
T Consensus 140 fg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 210 (323)
T cd05575 140 FGLCKEGIEHSK---------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN 210 (323)
T ss_pred cCCCcccccCCC---------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence 999864321110 111122333334566556678899999999999999999976543110 01
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
....++..+.++|.+||..+|.+||++.+..
T Consensus 211 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (323)
T cd05575 211 KPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDF 245 (323)
T ss_pred CCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCH
Confidence 1346788999999999999999999997543
No 43
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=1.7e-27 Score=240.82 Aligned_cols=223 Identities=17% Similarity=0.165 Sum_probs=156.6
Q ss_pred eeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.+.+.||+|+||.||+|... +|+.||||+++... ... . ........+|+.+|.++.+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~---~-------------~~~~~~~~~e~~~l~~l~~ 63 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAA--LVQ---K-------------AKTVEHTRTERNVLEHVRQ 63 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHH--Hhh---h-------------hhHHHHHHHHHHHHHhccC
Confidence 567899999999999999862 58899999986211 000 0 0011234578999999864
Q ss_pred -CCCCcceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 -HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 -~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ +.++. .+..++||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.+
T Consensus 64 ~~~i--~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~ 141 (332)
T cd05614 64 SPFL--VTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE 141 (332)
T ss_pred CCCc--ccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC
Confidence 332 22222 25678999999999998765321 12 2477899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcc-----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFL----- 311 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l----- 311 (472)
+.++|+|||++........ .....+.+...+++|+.+.. ..++.++||||||+++++++++..+..
T Consensus 142 ~~~kl~DfG~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 213 (332)
T cd05614 142 GHVVLTDFGLSKEFLSEEK--------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER 213 (332)
T ss_pred CCEEEeeCcCCccccccCC--------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC
Confidence 9999999999875422111 11112233333345554433 347889999999999999999764321
Q ss_pred --h----hhh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 312 --D----KEL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 312 --~----~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
. ..+ ....++..+.++|.+||..+|++||++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 214 NTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred CCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 0 001 1235788889999999999999999655
No 44
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95 E-value=2.2e-27 Score=239.67 Aligned_cols=223 Identities=13% Similarity=0.086 Sum_probs=158.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||+++....... . .......|..++..+.++..
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-----~--------------~~~~~~~e~~~l~~~~~~~~ 62 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD-----D--------------DVECTMVEKRVLALSGKPPF 62 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-----h--------------HHHHHHHHHHHHHhccCCCe
Confidence 456789999999999999984 688999999863210000 0 01123456677776654321
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
++..+. .+..++||||++|++|...+... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 63 -i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k 141 (323)
T cd05616 63 -LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred -EeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEE
Confidence 222222 25678999999999998765321 1 224788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||++........ ....+.+....++|+......++.++|+||||+++++++++..+.... .
T Consensus 142 L~DfG~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~ 212 (323)
T cd05616 142 IADFGMCKENMWDGV---------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 212 (323)
T ss_pred EccCCCceecCCCCC---------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999875321110 111122333334555556678899999999999999999976543110 0
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
+ .+..++.++..+|.+||..+|.+|++...
T Consensus 213 i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~ 248 (323)
T cd05616 213 IMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGP 248 (323)
T ss_pred HHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCC
Confidence 1 13468889999999999999999999753
No 45
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.95 E-value=1.1e-27 Score=243.24 Aligned_cols=234 Identities=15% Similarity=0.124 Sum_probs=165.0
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++....... .....+.+|+.+|..+.|+++
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~~~~~~i 63 (350)
T cd05573 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKR-------------------NQIAHVRAERDILADADSPWI 63 (350)
T ss_pred ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhc-------------------cHHHHHHHHHHHHHhcCCCCc
Confidence 567899999999999999984 799999999863210000 001234578999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..|+||||++|++|..++... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 64 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~k 141 (350)
T cd05573 64 --VKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIK 141 (350)
T ss_pred --cchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 33322 26689999999999998875432 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhcc--------------------ccchhhhhccccccccccccccCCCCcchheeccCchhh
Q 012042 242 MIDFPQMVSVSHQNAQMYFDR--------------------DVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~r--------------------D~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
|+|||++.............. .........+...+.+|+.+....++.++||||||+++|
T Consensus 142 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 142 LADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILY 221 (350)
T ss_pred eecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhh
Confidence 999999976543320000000 000111223333334566556778999999999999999
Q ss_pred hhhhccCCcchh-------hh---------h-ccCCCHHHHHHHHHHHhcCcccCCC-CCCCCCC
Q 012042 302 ASISKTAGFLDK-------EL---------A-ASGFTRKDQDVIQKFIGGSIEESGS-DDEGSDD 348 (472)
Q Consensus 302 ~~~t~~~~~l~~-------~~---------~-~~~~s~~~~~~l~k~l~~~p~~R~s-~~e~~~~ 348 (472)
+++++..+.... .+ . ...++.++.++|.+|+. +|.+||+ +++....
T Consensus 222 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 222 EMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred hhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 999976432110 01 0 12358889999999997 9999999 6666553
No 46
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.95 E-value=4.2e-27 Score=242.49 Aligned_cols=235 Identities=14% Similarity=0.160 Sum_probs=163.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++... ... ......+.+|+.+|.++.|+++
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~--~~~-----------------~~~~~~~~~E~~il~~l~h~~i 63 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD--VLM-----------------RNQAAHVKAERDILAEADNEWV 63 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH--HHh-----------------hhhHHHHHHHHHHHHhCCCCCc
Confidence 67789999999999999998 469999999885211 000 0011235579999999988654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..||||||++|++|..++... .+ ..++.||+.+|.|||+.||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ik 141 (376)
T cd05598 64 --VKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIK 141 (376)
T ss_pred --ceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEE
Confidence 33333 26789999999999998876432 12 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhc-----------------------------c----ccch-hhhhccccccccccccccCCC
Q 012042 242 MIDFPQMVSVSHQNAQMYFD-----------------------------R----DVEC-IFKFFRKRFHLNFQETTDGDD 287 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~-----------------------------r----D~~~-i~~~f~~~y~~~~~~~~~~~~ 287 (472)
|+|||+|..........++. + ...+ ...+++...+++|+......+
T Consensus 142 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 221 (376)
T cd05598 142 LTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY 221 (376)
T ss_pred EEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCC
Confidence 99999975332100000000 0 0000 012344444456665566778
Q ss_pred CcchheeccCchhhhhhhccCCcch-------hhhh----------ccCCCHHHHHHHHHHHhcCcccCC---CCCCCCC
Q 012042 288 GSDIDTDEGSRLSFASISKTAGFLD-------KELA----------ASGFTRKDQDVIQKFIGGSIEESG---SDDEGSD 347 (472)
Q Consensus 288 ~~~sDiySlG~~~f~~~t~~~~~l~-------~~~~----------~~~~s~~~~~~l~k~l~~~p~~R~---s~~e~~~ 347 (472)
+.++||||||+++|+++++..++.. ..+. ...++.+..++|.+|+ .+|++|+ +.++...
T Consensus 222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 222 TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999999999999997643311 0010 1246788889999977 5999999 5666655
Q ss_pred CC
Q 012042 348 DG 349 (472)
Q Consensus 348 ~~ 349 (472)
..
T Consensus 301 h~ 302 (376)
T cd05598 301 HP 302 (376)
T ss_pred CC
Confidence 43
No 47
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.95 E-value=1.3e-27 Score=238.53 Aligned_cols=223 Identities=14% Similarity=0.155 Sum_probs=157.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+. +|+.||||+++.....-. ...+.+|+.+|.++.|+++
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~h~ni 65 (303)
T cd07869 7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT---------------------PFTAIREASLLKGLKHANI 65 (303)
T ss_pred ceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccccc---------------------chhHHHHHHHHhhCCCCCc
Confidence 667899999999999999984 789999999863211000 0124579999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc-C---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-Q---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
. .+++ ....++||||+++ +|...+.. . . ...++.||+.+|.|||++||+||||||.|||++.++.+
T Consensus 66 v--~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 142 (303)
T cd07869 66 V--LLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGEL 142 (303)
T ss_pred C--eEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence 2 3332 2568999999976 44443321 1 1 23478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-----h
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK-----E 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~-----~ 314 (472)
+|+|||.+.....+... .....+..+..+|+.+.+ ..++.++|+||+|+++|+++++..++... .
T Consensus 143 kl~Dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 213 (303)
T cd07869 143 KLADFGLARAKSVPSHT---------YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQ 213 (303)
T ss_pred EECCCCcceeccCCCcc---------CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH
Confidence 99999998754322110 011122233445554433 45788999999999999999875432100 0
Q ss_pred ---h--------------------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 315 ---L--------------------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 315 ---~--------------------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
+ ....++....++|.+||+.+|.+|||+++-..-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 214 LERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred HHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0 001234567799999999999999999877653
No 48
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.95 E-value=1.5e-27 Score=244.36 Aligned_cols=232 Identities=13% Similarity=0.120 Sum_probs=162.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++....... .....+.+|+.+|..+.|+++
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~h~~i 63 (364)
T cd05599 3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEK-------------------EQVAHVRAERDILAEADNPWV 63 (364)
T ss_pred ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-------------------hHHHHHHHHHHHHHhCCCCCC
Confidence 56679999999999999998 4699999999863210000 011235579999999987654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..||||||++|++|..++... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~k 141 (364)
T cd05599 64 --VKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIK 141 (364)
T ss_pred --cceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence 33333 26689999999999998875322 1 224788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccc------------------------------hhhhhccccccccccccccCCCCcch
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVE------------------------------CIFKFFRKRFHLNFQETTDGDDGSDI 291 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~------------------------------~i~~~f~~~y~~~~~~~~~~~~~~~s 291 (472)
|+|||++..+......... ++.. .....+++....+|+......++.++
T Consensus 142 l~Dfg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 220 (364)
T cd05599 142 LSDFGLCTGLKKSHRTEFY-RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKEC 220 (364)
T ss_pred Eeecccceecccccccccc-ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCee
Confidence 9999998754321100000 0000 00012333334456555667789999
Q ss_pred heeccCchhhhhhhccCCcchh-------hh----------hccCCCHHHHHHHHHHHhcCcccCCC---CCCCCC
Q 012042 292 DTDEGSRLSFASISKTAGFLDK-------EL----------AASGFTRKDQDVIQKFIGGSIEESGS---DDEGSD 347 (472)
Q Consensus 292 DiySlG~~~f~~~t~~~~~l~~-------~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s---~~e~~~ 347 (472)
|+||||+++|+++++..+.... .+ ....++.+..++|.+|+. +|.+|++ +++...
T Consensus 221 DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 221 DWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred eeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999999999999976432110 00 112468888999999996 9999998 554444
No 49
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-27 Score=243.77 Aligned_cols=234 Identities=14% Similarity=0.169 Sum_probs=162.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+...||+|.||.|-+|++ .+++.||||++.... ..+.+...++... ...--....+|+.+|++|+|++
T Consensus 99 y~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~-------~~~~~~~~~~~a~-~~~~~ekv~~EIailKkl~H~n- 169 (576)
T KOG0585|consen 99 YELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKE-------LRRQYGFPRQPAM-KLMPIEKVRREIAILKKLHHPN- 169 (576)
T ss_pred eehhhhhcCCccceEEEEeecCCCcEEEEEeechhh-------hhhhccccccccc-ccCcHHHHHHHHHHHHhcCCcC-
Confidence 78889999999999999999 579999999985211 1111111111100 0011235779999999999854
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhcc------CChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQL------QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~------~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
|.+++.+ +..|||+|||..+++...-.. .....+++.++.+|.|||.+|||||||||.|+||+.+|.
T Consensus 170 -VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 170 -VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred -eeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc
Confidence 3444442 679999999998887655321 123468999999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcc---cchhhhccccchhhhhccccccccccccc----cCCCCcchheeccCchhhhhhhccCCcch
Q 012042 240 VTMIDFPQMVSVSHQ---NAQMYFDRDVECIFKFFRKRFHLNFQETT----DGDDGSDIDTDEGSRLSFASISKTAGFLD 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p---~a~~~l~rD~~~i~~~f~~~y~~~~~~~~----~~~~~~~sDiySlG~~~f~~~t~~~~~l~ 312 (472)
|||.|||.+...... .....|.+ ..+++-.++|+... .-..+.+.||||+|+++|-++-+..++.+
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~-------tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSR-------TVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhh-------cCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 999999998765322 11222322 23333334444322 23467789999999999998887655432
Q ss_pred h-------hh-----h---ccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 313 K-------EL-----A---ASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 313 ~-------~~-----~---~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
. .| . ...+...++++|.+||++||+.|.+-.
T Consensus 322 ~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~ 367 (576)
T KOG0585|consen 322 DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLP 367 (576)
T ss_pred chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehh
Confidence 1 01 0 122567788999999999999995443
No 50
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95 E-value=2.6e-27 Score=233.55 Aligned_cols=219 Identities=17% Similarity=0.176 Sum_probs=157.6
Q ss_pred ecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||+|+||.||++.. .+|+.||+|.+.... ... . .....+..|+.+|.++.|+++ ...+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~---~--------------~~~~~~~~E~~il~~l~hp~i--~~~~ 59 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKR--LKK---K--------------SGEKMALLEKEILEKVNSPFI--VNLA 59 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHH--hhc---c--------------hhhHHHHHHHHHHHhcCCCcE--EEEE
Confidence 79999999999988 469999999875211 000 0 001123468999999987653 2222
Q ss_pred e----cCCceeEEeecCCCChhhhhccC-----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 178 D----CNRHCVIMSLVQGYPLVQVNQLQ-----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 178 ~----~~~~~LVMEyi~G~~L~~l~~~~-----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
. ....++||||++|++|...+... .. ..++.||+.+|.+||+.||+||||||.|||++.++.++|+||
T Consensus 60 ~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Df 139 (277)
T cd05607 60 YAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDL 139 (277)
T ss_pred EEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeec
Confidence 2 25679999999999997754211 11 236789999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----------hh
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-----------KE 314 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----------~~ 314 (472)
|++......... ....+.....+|+.+....++.++|+||+|+++|+++++..+... ..
T Consensus 140 g~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~ 209 (277)
T cd05607 140 GLAVELKDGKTI----------TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR 209 (277)
T ss_pred eeeeecCCCcee----------eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH
Confidence 998765321110 011122233355555566799999999999999999997643211 00
Q ss_pred -------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 315 -------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 315 -------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.....++.++.++|.+||+.+|++||++.|..++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 210 TLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred hhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 0124688899999999999999999999887643
No 51
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-27 Score=244.07 Aligned_cols=219 Identities=13% Similarity=0.086 Sum_probs=160.3
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
...||+|+||+||+|.+.....||||++......-.. ...+.+|+.+|.+|+|++| ..
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~--------------------~~~f~~E~~il~~l~HpNI--V~ 103 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES--------------------RKAFRREASLLSRLRHPNI--VQ 103 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH--------------------HHHHHHHHHHHHhCCCCCe--ee
Confidence 4559999999999998863334999998643211110 2356789999999998653 22
Q ss_pred eeec---C--CceeEEeecCCCChhhhhcc--C---Ch---HHHHHHHHHHHHHHHHCC-ceeccCCCCcEEEcCCC-cE
Q 012042 176 AVDC---N--RHCVIMSLVQGYPLVQVNQL--Q---NP---DSVFETIIGLVVRLAEHG-LIHCDFNEFNIMIDDDE-KV 240 (472)
Q Consensus 176 ~i~~---~--~~~LVMEyi~G~~L~~l~~~--~---~~---~~i~~qIl~aL~~LH~~G-IIHrDLKP~NILl~~~g-~v 240 (472)
+++. . ..+|||||++|++|.+++.. . .+ ..++.+|+.+|.|||+++ ||||||||.||||+.++ .+
T Consensus 104 f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~ 183 (362)
T KOG0192|consen 104 FYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTL 183 (362)
T ss_pred EEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEE
Confidence 3332 2 47999999999999998754 1 11 247889999999999999 99999999999999987 99
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccc--cCCCCcchheeccCchhhhhhhccCCc--chh--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETT--DGDDGSDIDTDEGSRLSFASISKTAGF--LDK-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~--~~~~~~~sDiySlG~~~f~~~t~~~~~--l~~-- 313 (472)
||+|||+++...... ...+..+++|. ++|+.+. ...++.++||||||+++++.+|+..+. +..
T Consensus 184 KI~DFGlsr~~~~~~----------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~ 253 (362)
T KOG0192|consen 184 KIADFGLSREKVISK----------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ 253 (362)
T ss_pred EECCCccceeecccc----------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH
Confidence 999999998654221 11111233344 4555554 457999999999999999999985332 110
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
...+......+..+++.|...+|..||+-.+-.
T Consensus 254 ~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 254 VASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIV 297 (362)
T ss_pred HHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence 011234778899999999999999999976543
No 52
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=2.1e-27 Score=253.64 Aligned_cols=225 Identities=12% Similarity=0.107 Sum_probs=167.4
Q ss_pred eeeecceecccCceeEEEEEeC-C-CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-D-GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~-g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
.|.+.+.||+|+||.||+|... + ++.||+|+........ ...+.+|+.+|..+.|+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~----------------------~~~~~~E~~~l~~l~Hp 125 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ----------------------AAYARSELHCLAACDHF 125 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH----------------------HHHHHHHHHHHHhCCCC
Confidence 4788899999999999999873 4 6789999764321100 11345799999999987
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhcc----C--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL----Q--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~----~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
++ +++++. +..||||||++|++|...+.. . . ...++.||+.+|.|||++||+||||||.|||++
T Consensus 126 ni--v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~ 203 (478)
T PTZ00267 126 GI--VKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM 203 (478)
T ss_pred CE--eEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC
Confidence 63 444442 678999999999999775421 1 1 124788999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--- 312 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--- 312 (472)
.++.++|+|||++......... .....+.++..+++|+.+....++.++||||||+++++++++..+...
T Consensus 204 ~~~~~kL~DFgla~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~ 276 (478)
T PTZ00267 204 PTGIIKLGDFGFSKQYSDSVSL-------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ 276 (478)
T ss_pred CCCcEEEEeCcCceecCCcccc-------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999865432110 111223344444566666677899999999999999999997543211
Q ss_pred ----hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ----KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ----~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+ ....++.++.++|.+|+..+|++||++++...
T Consensus 277 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 277 REIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 000 12467889999999999999999999887654
No 53
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=2.8e-27 Score=239.90 Aligned_cols=223 Identities=16% Similarity=0.116 Sum_probs=165.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+|..||+|+++..... .....+.+|+.+|.++.|+++
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---------------------~~~~~~~~E~~~l~~l~h~~i 65 (331)
T cd06649 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKP---------------------AIRNQIIRELQVLHECNSPYI 65 (331)
T ss_pred ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCH---------------------HHHHHHHHHHHHHHHCCCCCC
Confidence 56678999999999999998 47899999998643110 011245679999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHC-CceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEH-GLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~-GIIHrDLKP~NILl~~~g~v 240 (472)
..+++ .+..++||||++|++|.+++... .+ ..++.+++.+|.|||+. +|+||||||.|||++.++.+
T Consensus 66 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~ 143 (331)
T cd06649 66 --VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEI 143 (331)
T ss_pred --CeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcE
Confidence 33333 26689999999999998876432 12 24788999999999985 69999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---h---
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---E--- 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---~--- 314 (472)
+|+|||++....... ...+.+...+.+|+.+.+..++.++|+||||+++++++++..+.... .
T Consensus 144 kl~Dfg~~~~~~~~~-----------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~ 212 (331)
T cd06649 144 KLCDFGVSGQLIDSM-----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEA 212 (331)
T ss_pred EEccCcccccccccc-----------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999987543211 11122333344566556677999999999999999999875432100 0
Q ss_pred -------------------------------------------------------hhccCCCHHHHHHHHHHHhcCcccC
Q 012042 315 -------------------------------------------------------LAASGFTRKDQDVIQKFIGGSIEES 339 (472)
Q Consensus 315 -------------------------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R 339 (472)
.....++.+++++|.+|+..+|++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~R 292 (331)
T cd06649 213 IFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAER 292 (331)
T ss_pred HhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccC
Confidence 0011367889999999999999999
Q ss_pred CCCCCCCCCC
Q 012042 340 GSDDEGSDDG 349 (472)
Q Consensus 340 ~s~~e~~~~~ 349 (472)
|++++..+-.
T Consensus 293 pt~~ell~h~ 302 (331)
T cd06649 293 ADLKMLMNHT 302 (331)
T ss_pred CCHHHHhcCh
Confidence 9999887643
No 54
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.95 E-value=3.1e-27 Score=235.59 Aligned_cols=221 Identities=14% Similarity=0.108 Sum_probs=156.4
Q ss_pred eeecceecccCceeEEEEEeC-----------------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHH
Q 012042 93 TAVGRQLGVGKESDIFEVARE-----------------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLA 155 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-----------------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~ 155 (472)
|.+.+.||+|+||.||+|.+. ++..||||+++.....- .+..
T Consensus 7 ~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~ 65 (304)
T cd05096 7 LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN---------------------ARND 65 (304)
T ss_pred CeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH---------------------HHHH
Confidence 456789999999999999753 23479999886432110 0123
Q ss_pred HHHHHHHHHHhhhCCCCcceeee----cCCceeEEeecCCCChhhhhccCC-------------------------hHHH
Q 012042 156 ALKEFAFMKALEDHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN-------------------------PDSV 206 (472)
Q Consensus 156 a~rE~~~L~~L~~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~-------------------------~~~i 206 (472)
+.+|+.+|.++.|+++ ..+++ .+..++||||++|++|..++.... ...+
T Consensus 66 ~~~E~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 143 (304)
T cd05096 66 FLKEVKILSRLKDPNI--IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHV 143 (304)
T ss_pred HHHHHHHHhhcCCCCe--eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHH
Confidence 4579999999987653 33443 266899999999999987653210 1248
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccC
Q 012042 207 FETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDG 285 (472)
Q Consensus 207 ~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~ 285 (472)
+.+|+.+|.|||++||+||||||.|||++.++.++|+|||.+.......... .......... ++|+....+
T Consensus 144 ~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~ 215 (304)
T cd05096 144 ALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR--------IQGRAVLPIRWMAWECILMG 215 (304)
T ss_pred HHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeE--------ecCcCCCCccccCHHHHhcC
Confidence 8899999999999999999999999999999999999999997553221100 0000111222 355544567
Q ss_pred CCCcchheeccCchhhhhhhcc--CCc--ch-hh------------------hhccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 286 DDGSDIDTDEGSRLSFASISKT--AGF--LD-KE------------------LAASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 286 ~~~~~sDiySlG~~~f~~~t~~--~~~--l~-~~------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.++.++|+||||++++++++.. .+. .. .. ..++.++..+.++|.+|++.+|++|||.
T Consensus 216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 7999999999999999987632 111 00 00 0123456788999999999999999998
Q ss_pred CC
Q 012042 343 DE 344 (472)
Q Consensus 343 ~e 344 (472)
++
T Consensus 296 ~~ 297 (304)
T cd05096 296 SD 297 (304)
T ss_pred HH
Confidence 65
No 55
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-28 Score=251.21 Aligned_cols=219 Identities=17% Similarity=0.255 Sum_probs=165.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|.||.||+|+. .+|..||||.++.. |. .|-. ..-.||+..|++|..+
T Consensus 12 Y~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K---f~---------------s~ee---~~nLREvksL~kln~h-- 68 (538)
T KOG0661|consen 12 YTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKK---FY---------------SWEE---CMNLREVKSLRKLNPH-- 68 (538)
T ss_pred HHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhh---hc---------------cHHH---HHHHHHHHHHHhcCCC--
Confidence 55568899999999999998 57999999976421 11 1211 1234799999999832
Q ss_pred Ccceeeec-------C-CceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVDC-------N-RHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~~-------~-~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
|+++.. + ..++||||++ ..|++++... ....++.||+.+|.+||++|+.|||+||+||||..
T Consensus 69 --pniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~ 145 (538)
T KOG0661|consen 69 --PNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG 145 (538)
T ss_pred --CcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc
Confidence 554442 3 6799999997 6777775432 12358999999999999999999999999999997
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCC-----c
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAG-----F 310 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~-----~ 310 (472)
...|||+|||+|+.+... .-.+.|+.++++-+|+.+ .++.|+...|+|++|++++|..+-++- .
T Consensus 146 ~~~iKiaDFGLARev~Sk----------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE 215 (538)
T KOG0661|consen 146 NDVIKIADFGLAREVRSK----------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE 215 (538)
T ss_pred cceeEecccccccccccC----------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH
Confidence 788999999999976421 123457777777778776 579999999999999999887663210 0
Q ss_pred chh--------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 LDK--------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 l~~--------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+|. ..+-+..+.+...+|.+|+.-||++||++.+-++
T Consensus 216 ~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 216 IDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 000 1112347788889999999999999999998877
No 56
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.95 E-value=3.6e-27 Score=238.30 Aligned_cols=219 Identities=16% Similarity=0.202 Sum_probs=157.4
Q ss_pred ceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 97 RQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.||+|+||.||+|... +++.||||+++.... .... .......+|+.+|..+.|+++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~-~~~~-----------------~~~~~~~~E~~il~~l~hp~i- 62 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI-VRNQ-----------------KDTAHTKAERNILEAVKHPFI- 62 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHH-Hhhh-----------------hhHHHHHHHHHHHHhCCCCch-
Confidence 57999999999999862 578999999863210 0000 001234579999999988764
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.++. .+..|+||||++|++|...+... . ...++.||+.+|.|||+.||+||||||.|||++.++.++|
T Consensus 63 -v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl 141 (323)
T cd05584 63 -VDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKL 141 (323)
T ss_pred -hceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEE
Confidence 33332 25689999999999998865322 1 1236789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL 315 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~ 315 (472)
+|||++......... ...+.+...+++|+.+....++.++||||||+++|+++++..+.... .+
T Consensus 142 ~Dfg~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~ 212 (323)
T cd05584 142 TDFGLCKESIHEGTV---------THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKI 212 (323)
T ss_pred eeCcCCeecccCCCc---------ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 999998753222110 11122333344566555677889999999999999999976432110 00
Q ss_pred ------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 316 ------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 316 ------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.+..++..+.++|.+|+..+|++||++..
T Consensus 213 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 247 (323)
T cd05584 213 LKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGP 247 (323)
T ss_pred HcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCC
Confidence 13457888999999999999999996543
No 57
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.95 E-value=3.9e-27 Score=238.05 Aligned_cols=220 Identities=11% Similarity=0.104 Sum_probs=155.5
Q ss_pred ceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHH-HHHHHhhhCCCCcc
Q 012042 97 RQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEF-AFMKALEDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~-~~L~~L~~~gi~vP 174 (472)
+.||+|+||.||+|.+. +++.||||++.... ..... .......|. .++..+.|+++ +
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~-----------------~~~~~~~e~~~~l~~~~h~~I--v 59 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKA--ILKKK-----------------EEKHIMSERNVLLKNVKHPFL--V 59 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--HHhhh-----------------HHHHHHHHHHHHHHhCCCCCC--C
Confidence 36899999999999984 68899999986321 00000 000112333 34566776653 2
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.++. .+..|+||||++|++|...+... . ...++.||+.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~D 139 (325)
T cd05602 60 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTD 139 (325)
T ss_pred ceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEcc
Confidence 3322 26689999999999998865422 1 123778999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~-- 315 (472)
||++.....+.. ....+.+...+++|+......++.++||||||+++++++++..+.... .+
T Consensus 140 fG~a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 210 (325)
T cd05602 140 FGLCKENIEHNG---------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 210 (325)
T ss_pred CCCCcccccCCC---------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence 999874322111 111223333334566556678899999999999999999976543110 01
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
....++..+..+|.+||..+|.+|+++.+..
T Consensus 211 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 211 KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1246888999999999999999999988653
No 58
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=2.2e-27 Score=228.97 Aligned_cols=222 Identities=18% Similarity=0.243 Sum_probs=161.2
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++++.||+|+||.||+|.+. +++.||+|++......... .....+|+.++.++.|+++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~--------------------~~~~~~e~~~~~~l~~~~i 60 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE--------------------REENIREIKILRRLRHPNI 60 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH--------------------HHHHHHHHHHHHHHTBTTB
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc--------------------cchhhhhhhcccccccccc
Confidence 678899999999999999995 5778999998754322211 0112349999999987664
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhc-c-C----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQ-L-Q----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~-~-~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++ ....++||||+++++|.+++. . . ....++.+|+.+|.+||+.||+|+||||.||+++.++.++
T Consensus 61 --~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~ 138 (260)
T PF00069_consen 61 --VQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVK 138 (260)
T ss_dssp --CHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEE
T ss_pred --cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 33443 266889999999999988764 1 1 1235889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||++...... ..............+|+.+. ....+.++|+||+|+++++++++..+....
T Consensus 139 l~Dfg~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~ 209 (260)
T PF00069_consen 139 LIDFGSSVKLSEN---------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLE 209 (260)
T ss_dssp ESSGTTTEESTST---------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHH
T ss_pred ccccccccccccc---------ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 9999999754110 01111122222233454444 688999999999999999999975422110
Q ss_pred --------hhhccC-----CCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 --------ELAASG-----FTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 --------~~~~~~-----~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
...... ...++.++|.+|++.+|++||+..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l 254 (260)
T PF00069_consen 210 IIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEEL 254 (260)
T ss_dssp HHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHH
T ss_pred hhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHH
Confidence 011111 13788999999999999999997653
No 59
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.5e-27 Score=248.76 Aligned_cols=219 Identities=14% Similarity=0.108 Sum_probs=158.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||.|+||.||+|.+ .+++.||||.... ..+.+|+.+|.+|.|++
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~----------------------------~~~~~E~~il~~l~Hpn 144 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR----------------------------GGTATEAHILRAINHPS 144 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh----------------------------hhhHHHHHHHHhCCCCC
Confidence 378889999999999999999 5799999996421 02347999999999876
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ ..+++ ....++|||++.+ +|...+... ....++.||+.+|.|||++|||||||||.|||++.++.+
T Consensus 145 I--v~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~v 221 (391)
T PHA03212 145 I--IQLKGTFTYNKFTCLILPRYKT-DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDV 221 (391)
T ss_pred C--CCEeEEEEECCeeEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCE
Confidence 4 33333 2567899999964 555543211 123578999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||+|........ .....+.++..+.+|+.+....++.++|+||||+++|+++++.......
T Consensus 222 kL~DFG~a~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~ 293 (391)
T PHA03212 222 CLGDFGAACFPVDINA--------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDC 293 (391)
T ss_pred EEEeCCcccccccccc--------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccC
Confidence 9999999864321111 1111223343444666556678899999999999999999875321100
Q ss_pred -----------------------------hh-------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -----------------------------EL-------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -----------------------------~~-------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ ....++.++..+|.+||..+|++|||++|.
T Consensus 294 ~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~el 373 (391)
T PHA03212 294 DSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEAL 373 (391)
T ss_pred chhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHH
Confidence 00 001234567889999999999999999988
Q ss_pred CCCC
Q 012042 346 SDDG 349 (472)
Q Consensus 346 ~~~~ 349 (472)
+...
T Consensus 374 L~hp 377 (391)
T PHA03212 374 LDFA 377 (391)
T ss_pred hcCh
Confidence 7643
No 60
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=2.8e-27 Score=239.33 Aligned_cols=223 Identities=13% Similarity=0.095 Sum_probs=158.6
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
++.+.||+|+||.||+|.+ .+|+.||||+++... ... . ........|..++..+.++.+
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~---~--------------~~~~~~~~e~~~l~~~~~~~~- 62 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDV--VIQ---D--------------DDVECTMVEKRVLALQDKPPF- 62 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--hhh---h--------------hHHHHHHHHHHHHHhccCCCc-
Confidence 4568999999999999998 479999999986321 000 0 001123467788877765432
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
++.... .+..|+||||++|++|...+... ....++.+|+.+|.|||++||+||||||.|||++.++.++|
T Consensus 63 i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL 142 (323)
T cd05615 63 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred hhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEE
Confidence 233322 25689999999999998765321 12247889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL 315 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~ 315 (472)
+|||++.....+.. ....+.+....++|+......++.++|+||||+++++++++..+.... .+
T Consensus 143 ~Dfg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i 213 (323)
T cd05615 143 ADFGMCKEHMVDGV---------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 213 (323)
T ss_pred eccccccccCCCCc---------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999874321111 011122232334555555677899999999999999999976532110 01
Q ss_pred ------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 316 ------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 316 ------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+..++.+...++.+|+..+|.+|++..++
T Consensus 214 ~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~ 249 (323)
T cd05615 214 MEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPE 249 (323)
T ss_pred HhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCC
Confidence 124578888999999999999999997643
No 61
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95 E-value=2.3e-27 Score=239.15 Aligned_cols=219 Identities=13% Similarity=0.074 Sum_probs=154.6
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+++.||||+++........ .......|..++..+ .|+++ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~~~~hp~i--~ 59 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDD-------------------DVECTMVERRVLALAWEHPFL--T 59 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhh-------------------hHHHHHHHHHHHHhccCCCCc--c
Confidence 3689999999999998 46889999998632100000 001223455556544 44432 3
Q ss_pred eeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
..+.. ...|+||||++|++|...+... . ...++.||+.+|.|||+.||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~D 139 (316)
T cd05592 60 HLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIAD 139 (316)
T ss_pred ceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEcc
Confidence 33322 5689999999999998765322 1 124788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h----h---
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K----E--- 314 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~----~--- 314 (472)
||++....... .....+.+...+++|+.+....++.++|+||||+++++++++..+... . .
T Consensus 140 fg~a~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~ 210 (316)
T cd05592 140 FGMCKENMNGE---------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN 210 (316)
T ss_pred CcCCeECCCCC---------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 99997542211 111122334444566655667789999999999999999997643211 0 0
Q ss_pred ---hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 ---LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ---~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+..++.++.++|.+|++.+|.+||+..++
T Consensus 211 ~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~ 244 (316)
T cd05592 211 DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGD 244 (316)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHH
Confidence 1134578889999999999999999988543
No 62
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=4.7e-27 Score=240.65 Aligned_cols=224 Identities=14% Similarity=0.139 Sum_probs=159.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......... ...+.+|+.++..+.|+++
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~ni 82 (359)
T cd07876 23 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH--------------------AKRAYRELVLLKCVNHKNI 82 (359)
T ss_pred eEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH--------------------HHHHHHHHHHHHhCCCCCE
Confidence 67789999999999999998 56999999988532111110 1134579999999988653
Q ss_pred Ccceeeec----------CCceeEEeecCCCChhhhhccC----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
..++.. ...|+||||+++..+ ..+... ....++.||+.+|.|||++||+||||||.|||++.+
T Consensus 83 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~-~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~ 159 (359)
T cd07876 83 --ISLLNVFTPQKSLEEFQDVYLVMELMDANLC-QVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 159 (359)
T ss_pred --eeeeeeeccCCCccccceeEEEEeCCCcCHH-HHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence 222221 246899999987543 332222 123478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+.++|+|||++....... ....+.++..+.+|+...+..++.++|+||||+++++++++...+-..
T Consensus 160 ~~~kl~Dfg~a~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~ 229 (359)
T cd07876 160 CTLKILDFGLARTACTNF----------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 229 (359)
T ss_pred CCEEEecCCCccccccCc----------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999999986432110 111223334445666656778999999999999999999875322100
Q ss_pred ----------------------hh-----------------------------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 314 ----------------------EL-----------------------------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 314 ----------------------~~-----------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.+ .....+..++++|.+||..+|++|||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 309 (359)
T cd07876 230 QWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISV 309 (359)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCH
Confidence 00 000124567899999999999999999
Q ss_pred CCCCCCC
Q 012042 343 DEGSDDG 349 (472)
Q Consensus 343 ~e~~~~~ 349 (472)
.|-....
T Consensus 310 ~e~l~hp 316 (359)
T cd07876 310 DEALRHP 316 (359)
T ss_pred HHHhcCc
Confidence 8877644
No 63
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95 E-value=2.8e-27 Score=238.98 Aligned_cols=219 Identities=15% Similarity=0.112 Sum_probs=155.9
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+++.||||+++... ... . .......+|..++..+. |++ ++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~----~-------------~~~~~~~~e~~~l~~~~~h~~--iv 59 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDV--ILQ----D-------------DDVECTMTEKRILSLARNHPF--LT 59 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHH--Hhh----c-------------cHHHHHHHHHHHHHhccCCCc--hh
Confidence 3689999999999998 468999999886321 000 0 00112346777777664 443 23
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
..+. .+..|+||||++|++|...+... .+ ..++.|++.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~D 139 (320)
T cd05590 60 QLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLAD 139 (320)
T ss_pred ceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEee
Confidence 3332 26689999999999998765322 11 23788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~-- 315 (472)
||++....... .....+.+...+++|+......++.++|+||||+++++++++..+.... .+
T Consensus 140 fG~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~ 210 (320)
T cd05590 140 FGMCKEGIFNG---------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 210 (320)
T ss_pred CCCCeecCcCC---------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc
Confidence 99987532111 0111223333344566556677899999999999999999976542110 01
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
....++.++.++|.+||..+|++|+++.+.
T Consensus 211 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 244 (320)
T cd05590 211 DEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTL 244 (320)
T ss_pred CCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 123578888999999999999999999664
No 64
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=2.5e-27 Score=254.43 Aligned_cols=229 Identities=14% Similarity=0.108 Sum_probs=166.1
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++....+-.. ...+.+|+.+|..+.|++
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~--------------------~~~~~~Ei~~l~~~~h~~ 92 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEAD--------------------KNRAQAEVCCLLNCDFFS 92 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHH--------------------HHHHHHHHHHHhcCCCCc
Confidence 477889999999999999988 57999999998643211110 123557888888887654
Q ss_pred CCcce-eeec---------CCceeEEeecCCCChhhhhccC------Ch----HHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 171 FPVPN-AVDC---------NRHCVIMSLVQGYPLVQVNQLQ------NP----DSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 171 i~vP~-~i~~---------~~~~LVMEyi~G~~L~~l~~~~------~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
+.... .+.. ...++||||++|++|.+.+... .+ ..++.|++.+|.|||+.||+||||||.
T Consensus 93 iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~ 172 (496)
T PTZ00283 93 IVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSA 172 (496)
T ss_pred EEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHH
Confidence 21111 1110 1257999999999998765311 11 237889999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
|||++.++.++|+|||++......... + ....+.+...+++|+.+....++.++||||||+++++++++..++
T Consensus 173 NILl~~~~~vkL~DFGls~~~~~~~~~-----~--~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf 245 (496)
T PTZ00283 173 NILLCSNGLVKLGDFGFSKMYAATVSD-----D--VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPF 245 (496)
T ss_pred HEEEeCCCCEEEEecccCeeccccccc-----c--ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999765432111 1 011233444445666666778999999999999999999976432
Q ss_pred ch--------h------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 LD--------K------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 l~--------~------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. . ...+..++.++..+|.+|+..+|.+||+..+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 246 DGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 11 0 0123567889999999999999999999987654
No 65
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.95 E-value=4.9e-27 Score=238.27 Aligned_cols=217 Identities=17% Similarity=0.127 Sum_probs=155.5
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+++.||||+++.....-. .....+..|..++.++ .|+++ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~~~~hp~i--v 59 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-------------------EDIDWVQTEKHVFEQASNHPFL--V 59 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-------------------hHHHHHHHHHHHHHhcCCCCcC--C
Confidence 3699999999999998 4689999999863210000 0011345688888776 45443 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.+++ .+..++||||++|++|...+... .+ ..++.+|+.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~D 139 (329)
T cd05618 60 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTD 139 (329)
T ss_pred ceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEee
Confidence 3333 26789999999999997764321 22 24788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--------h----
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--------D---- 312 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--------~---- 312 (472)
||++.....+.. ....+.+....++|+...+..++.++|+||||+++++++++..+.. .
T Consensus 140 fG~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~ 210 (329)
T cd05618 140 YGMCKEGLRPGD---------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE 210 (329)
T ss_pred CCccccccCCCC---------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccH
Confidence 999874322111 1112233333445665566778999999999999999999754321 0
Q ss_pred ----hhh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 313 ----KEL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 313 ----~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
..+ .+..++.++.++|.+||..+|++|+++.
T Consensus 211 ~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~ 251 (329)
T cd05618 211 DYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCH 251 (329)
T ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCC
Confidence 000 1345788889999999999999999975
No 66
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.95 E-value=4.5e-27 Score=237.55 Aligned_cols=220 Identities=14% Similarity=0.110 Sum_probs=155.2
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHH-HHHHhhhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFA-FMKALEDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~-~L~~L~~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+|+.||||+++........ ......+|.. ++..+.|+++ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-------------------~~~~~~~e~~~~l~~~~hp~i--v 59 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRK-------------------EQKHIMAERNVLLKNVKHPFL--V 59 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhh-------------------HHHHHHHHHHHHHHhCCCCCC--c
Confidence 3689999999999998 57999999998632100000 0011223443 4566777653 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.++. .+..|+||||++|++|...+... . ...++.||+.+|.|||+.||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~D 139 (325)
T cd05604 60 GLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTD 139 (325)
T ss_pred cEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEee
Confidence 3332 26789999999999997765322 1 124788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------hhh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KEL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~-- 315 (472)
||++....... .....+.+...+++|+......++.++|+||||+++++++++..+... ..+
T Consensus 140 fG~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~ 210 (325)
T cd05604 140 FGLCKEGIAQS---------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH 210 (325)
T ss_pred cCCcccCCCCC---------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc
Confidence 99986432110 111122333334456655667789999999999999999997643211 001
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
...+++..+..+|.+|+..+|.+||+..+..
T Consensus 211 ~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 211 KPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred CCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 1346788889999999999999999997543
No 67
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.95 E-value=6.6e-27 Score=235.76 Aligned_cols=219 Identities=14% Similarity=0.119 Sum_probs=154.6
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHH-HHHHHhhhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEF-AFMKALEDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~-~~L~~L~~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+|+.||||++.... ..... ......+|. .++..+.|+++ +
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~-----------------~~~~~~~e~~~~l~~~~h~~i--v 59 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKT--ILKKK-----------------EQNHIMAERNVLLKNLKHPFL--V 59 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH--HHHhh-----------------HHHHHHHHHHHHHHhCCCCCc--c
Confidence 3689999999999998 468999999985221 10000 001122343 35677777653 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.++. .+..|+||||++|++|...+... . ...++.||+.+|.|||+.||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~D 139 (321)
T cd05603 60 GLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTD 139 (321)
T ss_pred ceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEcc
Confidence 3332 26689999999999997754321 1 124788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~-- 315 (472)
||++.....+.. ....+.+...+.+|+.+....++.++|+||||+++|+++++..+.... .+
T Consensus 140 fg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 210 (321)
T cd05603 140 FGLCKEGVEPEE---------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH 210 (321)
T ss_pred CCCCccCCCCCC---------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc
Confidence 999864322211 111223333334566555677899999999999999999986543110 01
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+.+.+..+.++|.+||..+|.+|+++...
T Consensus 211 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (321)
T cd05603 211 KPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKAD 244 (321)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCC
Confidence 124577888999999999999999998643
No 68
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95 E-value=5.2e-27 Score=236.71 Aligned_cols=216 Identities=13% Similarity=0.092 Sum_probs=153.0
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+|+.||||+++... ...- ........|..++..+. |++ ++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~-----------------~~~~~~~~e~~il~~~~~hp~--i~ 59 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDV--ILQD-----------------DDVDCTMTEKRILALAAKHPF--LT 59 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHH--hhhh-----------------hHHHHHHHHHHHHHhccCCCC--cc
Confidence 3689999999999998 468999999986321 0000 00112346778887663 433 23
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.++. .+..|+||||++|++|...+... . ...++.+|+.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~D 139 (321)
T cd05591 60 ALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLAD 139 (321)
T ss_pred ceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEee
Confidence 3333 25689999999999997764321 1 124788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------hhh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KEL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~-- 315 (472)
||++.....+.. ....+.+...+++|+.+....++.++|+||||+++++++++..+... ..+
T Consensus 140 fg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~ 210 (321)
T cd05591 140 FGMCKEGILNGV---------TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH 210 (321)
T ss_pred cccceecccCCc---------cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 999875322111 01112233333455555567789999999999999999997643211 011
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.+..++.++.++|.+||..+|++|++.
T Consensus 211 ~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~ 241 (321)
T cd05591 211 DDVLYPVWLSKEAVSILKAFMTKNPNKRLGC 241 (321)
T ss_pred CCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 123468889999999999999999954
No 69
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.1e-28 Score=253.14 Aligned_cols=215 Identities=16% Similarity=0.266 Sum_probs=166.1
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.+.||.|+||.||.|++ .+.+.||||.+..+.. .....|. .+.+|+.+|.+|.| |
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGK--------------Qs~EKWq-----DIlKEVrFL~~l~H-----P 86 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--------------QSNEKWQ-----DILKEVRFLRQLRH-----P 86 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeecccccc--------------ccHHHHH-----HHHHHHHHHHhccC-----C
Confidence 47799999999999999 5788999997753211 1112333 25689999999987 5
Q ss_pred eeeec-------CCceeEEeecCCC--ChhhhhccC----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 175 NAVDC-------NRHCVIMSLVQGY--PLVQVNQLQ----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 175 ~~i~~-------~~~~LVMEyi~G~--~L~~l~~~~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.|.+ ...|||||||-|. +|.++.... ....|+.+.+.+|.|||+++.||||||..|||+++.|.||
T Consensus 87 ntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VK 166 (948)
T KOG0577|consen 87 NTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVK 166 (948)
T ss_pred CcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeee
Confidence 55554 4578999999874 333332211 2335889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcch------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLD------ 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------ 312 (472)
|.|||.|.... -...|++++|.++|+.. -.+.|+-+.||||+|++|.++...+++...
T Consensus 167 LaDFGSAsi~~-------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 167 LADFGSASIMA-------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred eccccchhhcC-------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 99999986332 13457899999999875 359999999999999999998876543211
Q ss_pred ---------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ---------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ---------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.-+....||..|.+.++.||+.-|++|||+++..-
T Consensus 234 LYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 234 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 01223458999999999999999999999998754
No 70
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.95 E-value=6.9e-27 Score=241.15 Aligned_cols=234 Identities=15% Similarity=0.182 Sum_probs=160.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .+|+.||||++.... .+. . .....+.+|+.+|.++.|+++
T Consensus 3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-~~~-----~-------------~~~~~~~~E~~il~~l~hp~i 63 (377)
T cd05629 3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE-MFK-----K-------------DQLAHVKAERDVLAESDSPWV 63 (377)
T ss_pred ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-HHH-----h-------------HHHHHHHHHHHHHHhCCCCCc
Confidence 45678999999999999988 579999999875211 000 0 001235679999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+++++. +..||||||++|++|..++... . ...++.|++.+|.|||++||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~k 141 (377)
T cd05629 64 --VSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK 141 (377)
T ss_pred --ceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEE
Confidence 444432 5689999999999998875321 1 123788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhcc--------------cc-------------c-----------hhhhhccccccccccccc
Q 012042 242 MIDFPQMVSVSHQNAQMYFDR--------------DV-------------E-----------CIFKFFRKRFHLNFQETT 283 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~r--------------D~-------------~-----------~i~~~f~~~y~~~~~~~~ 283 (472)
|+|||++..........+..+ .. . ....+++...+++|+.+.
T Consensus 142 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 221 (377)
T cd05629 142 LSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL 221 (377)
T ss_pred EeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc
Confidence 999999864321100000000 00 0 000123333344666556
Q ss_pred cCCCCcchheeccCchhhhhhhccCCcch-------hhhh----------ccCCCHHHHHHHHHHHhcCcccC---CCCC
Q 012042 284 DGDDGSDIDTDEGSRLSFASISKTAGFLD-------KELA----------ASGFTRKDQDVIQKFIGGSIEES---GSDD 343 (472)
Q Consensus 284 ~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~~----------~~~~s~~~~~~l~k~l~~~p~~R---~s~~ 343 (472)
...++.++|+||||+++|+++++..++.. ..+. ...++.+.+++|.+||. +|.+| ++++
T Consensus 222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 222 QQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred cCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 67889999999999999999998643210 0010 12467888999999997 77765 4666
Q ss_pred CCCCC
Q 012042 344 EGSDD 348 (472)
Q Consensus 344 e~~~~ 348 (472)
+....
T Consensus 301 ~~l~h 305 (377)
T cd05629 301 EIKSH 305 (377)
T ss_pred HHhcC
Confidence 65553
No 71
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.94 E-value=7.1e-27 Score=236.94 Aligned_cols=217 Identities=17% Similarity=0.125 Sum_probs=156.2
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+++.||||+++.....-. .....+.+|..++.++. |+++ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-------------------~~~~~~~~e~~il~~~~~hp~I--v 59 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-------------------EDIDWVQTEKHVFETASNHPFL--V 59 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-------------------hHHHHHHHHHHHHHhccCCCCC--C
Confidence 3689999999999998 4689999999863210000 00113457888888884 4432 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
..+. .+..||||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~D 139 (329)
T cd05588 60 GLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTD 139 (329)
T ss_pred ceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECc
Confidence 3333 25689999999999997765321 22 24788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc-----h-------
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL-----D------- 312 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l-----~------- 312 (472)
||++.....+.. ....+.+....++|+.+....++.++|+||||+++++++++..+.- +
T Consensus 140 fg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~ 210 (329)
T cd05588 140 YGMCKEGIRPGD---------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTE 210 (329)
T ss_pred CccccccccCCC---------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccch
Confidence 999864221111 1112233333446665567788999999999999999999754321 0
Q ss_pred ----hhh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 313 ----KEL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 313 ----~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
..+ .+..++.++..+|.+||..+|.+|++..
T Consensus 211 ~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 251 (329)
T cd05588 211 DYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCH 251 (329)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 000 1345788899999999999999999864
No 72
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=3.4e-27 Score=243.54 Aligned_cols=228 Identities=14% Similarity=0.200 Sum_probs=164.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCc--chhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGR--TSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~--~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
|+..++||+|.||.||+|++ .+|+.||+|.++... ..|- ..+.||+.+|++|.|+
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~----------------------~t~~REI~ILr~l~Hp 176 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFP----------------------ITAIREIKILRRLDHP 176 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcch----------------------HHHHHHHHHHHhcCCC
Confidence 45568899999999999999 689999999887543 2221 2356899999999997
Q ss_pred CCCcce-eee---cCCceeEEeecCCCChhhhhcc-----C--ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 170 GFPVPN-AVD---CNRHCVIMSLVQGYPLVQVNQL-----Q--NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 170 gi~vP~-~i~---~~~~~LVMEyi~G~~L~~l~~~-----~--~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+|.--. ++. .+..|||+||++. +|.-++.. . ....++.||+.+|.|||.+||+|||||..||||+.+|
T Consensus 177 NIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G 255 (560)
T KOG0600|consen 177 NIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG 255 (560)
T ss_pred cccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC
Confidence 642222 222 2578999999983 34333321 1 2345999999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCc-----ch
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGF-----LD 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~-----l~ 312 (472)
.+||+|||+|..........+..| +-+.++-+|+.+ ....|+...|+||.|+++-|+.++++-. ++
T Consensus 256 ~LKiaDFGLAr~y~~~~~~~~T~r--------VvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve 327 (560)
T KOG0600|consen 256 VLKIADFGLARFYTPSGSAPYTSR--------VVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE 327 (560)
T ss_pred CEEeccccceeeccCCCCcccccc--------eEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH
Confidence 999999999986653322222211 112222244443 4589999999999999998888764300 00
Q ss_pred ----------------hh---hh------------------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCCCC
Q 012042 313 ----------------KE---LA------------------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDGNE 351 (472)
Q Consensus 313 ----------------~~---~~------------------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~~~ 351 (472)
|. ++ -..|+...-.+|++||..+|.+|.|+.+-+..+-+
T Consensus 328 Ql~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 328 QLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred HHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 00 00 12367777799999999999999999988876644
No 73
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.94 E-value=1.2e-26 Score=234.48 Aligned_cols=226 Identities=14% Similarity=0.114 Sum_probs=161.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++....... .....+..|+.++..+.|+++
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-------------------~~~~~~~~e~~i~~~~~~~~i 63 (330)
T cd05601 3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQ-------------------ETVSFFEEERDILSISNSPWI 63 (330)
T ss_pred ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhh-------------------hHHHHHHHHHHHHHhCCCCCC
Confidence 56779999999999999998 4799999999863211000 011235578888888887653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++. .+..+|||||++|++|..++... .+ ..++.||+.+|.+||+.||+||||||.|||++.++.+
T Consensus 64 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~ 141 (330)
T cd05601 64 --PQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHI 141 (330)
T ss_pred --cceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCE
Confidence 33332 25689999999999998876432 12 2377899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc------cCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT------DGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~------~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
+|+|||++......... ......+...+.+|+.+. ...++.++||||||+++++++++..+...
T Consensus 142 kL~Dfg~a~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 142 KLADFGSAARLTANKMV--------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred EeccCCCCeECCCCCce--------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 99999999765422110 000011222233444332 45678999999999999999997643211
Q ss_pred -----hhh---------h-ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 313 -----KEL---------A-ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 313 -----~~~---------~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
..+ . ...++..+.++|.+|+. +|.+||+.++....
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000 0 12468889999999997 99999999877654
No 74
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.94 E-value=5.7e-27 Score=231.55 Aligned_cols=216 Identities=16% Similarity=0.138 Sum_probs=155.5
Q ss_pred ecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||+|+||.||+|.+ .+|+.||||++........ . ....+..|+.+|..++|+++ ....
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~--------------~~~~~~~E~~il~~l~~~~i--~~~~ 59 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-----K--------------GYEGAMVEKRILAKVHSRFI--VSLA 59 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-----H--------------HHHHHHHHHHHHHhCCCCcE--eeee
Confidence 69999999999998 4799999998753211000 0 00134579999999987643 2222
Q ss_pred e----cCCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 178 D----CNRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 178 ~----~~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
. .+..++||||++|++|...+.. ..+ ..++.||+.+|.|||++||+||||||.|||++.++.++|+
T Consensus 60 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~ 139 (280)
T cd05608 60 YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRIS 139 (280)
T ss_pred EEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence 2 2568999999999999765411 111 2478899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------hhh-
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KEL- 315 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~- 315 (472)
|||.+........ ....+.+.....+|+......++.++|+||||+++++++++..+... ..+
T Consensus 140 dfg~~~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~ 210 (280)
T cd05608 140 DLGLAVELKDGQS---------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 210 (280)
T ss_pred eCccceecCCCCc---------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH
Confidence 9999976532211 11112233334456655677889999999999999999987543210 000
Q ss_pred ---------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 316 ---------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 316 ---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
....++..+.+++.+|+..+|++||+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 248 (280)
T cd05608 211 QRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRD 248 (280)
T ss_pred HhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCC
Confidence 12457888999999999999999997654
No 75
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.94 E-value=5.1e-27 Score=239.85 Aligned_cols=216 Identities=12% Similarity=0.096 Sum_probs=158.2
Q ss_pred eeecceecccCceeEEEEEeC-C-CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-D-GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~-g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+. + +..||||++........ .....+.+|+.+|..+.|++
T Consensus 32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~hp~ 92 (340)
T PTZ00426 32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQ-------------------KQVDHVFSERKILNYINHPF 92 (340)
T ss_pred cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhh-------------------hhHHHHHHHHHHHHhCCCCC
Confidence 556789999999999999863 3 46899998852210000 00123457999999998875
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +..++ .+..|+||||++|++|..++... .+ ..++.||+.+|.|||+.||+||||||.|||++.++.+
T Consensus 93 I--v~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~i 170 (340)
T PTZ00426 93 C--VNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFI 170 (340)
T ss_pred C--cceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCE
Confidence 4 33333 25689999999999998876432 12 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------h
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------K 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~ 313 (472)
+|+|||.+...... ...+.+...+++|+......++.++|+||||+++++++++..+... .
T Consensus 171 kL~DFG~a~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 238 (340)
T PTZ00426 171 KMTDFGFAKVVDTR------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ 238 (340)
T ss_pred EEecCCCCeecCCC------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHH
Confidence 99999999754311 0112233333455555566788999999999999999998654321 0
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
.+ .+..++...+++|.+||..+|++|+.
T Consensus 239 ~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 239 KILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYG 272 (340)
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCC
Confidence 11 13457888899999999999999974
No 76
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.94 E-value=7.9e-27 Score=241.12 Aligned_cols=227 Identities=15% Similarity=0.177 Sum_probs=158.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++....... .....+.+|+.+|.++.|+++
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-------------------~~~~~~~~E~~il~~~~h~~i 63 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLR-------------------NQVAHVKAERDILAEADNEWV 63 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhH-------------------HHHHHHHHHHHHHHhCCCCcC
Confidence 56778999999999999998 5689999998863210000 011235679999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+..+. .+..||||||++|++|..++... .+ ..++.||+.+|.|||+.||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~k 141 (382)
T cd05625 64 --VRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIK 141 (382)
T ss_pred --CeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 33333 25689999999999998875322 22 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhc-------------------------------------cccchh-hhhccccccccccccc
Q 012042 242 MIDFPQMVSVSHQNAQMYFD-------------------------------------RDVECI-FKFFRKRFHLNFQETT 283 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~-------------------------------------rD~~~i-~~~f~~~y~~~~~~~~ 283 (472)
|+|||+|..........+.. ....+. ..+.++..+.+|+.+.
T Consensus 142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 221 (382)
T cd05625 142 LTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL 221 (382)
T ss_pred EeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc
Confidence 99999975332100000000 000000 1123333445666556
Q ss_pred cCCCCcchheeccCchhhhhhhccCCcchh-------hh---------h-ccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 284 DGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL---------A-ASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 284 ~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~---------~-~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
...++.++|+||+|+++|+++++..++... .+ . ...++.+..++|.+|+ .+|++|++
T Consensus 222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 222 RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 778999999999999999999986543210 01 1 1347888889999987 49999987
No 77
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.94 E-value=5.3e-27 Score=236.60 Aligned_cols=219 Identities=14% Similarity=0.074 Sum_probs=154.9
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+|+.||||+++........ .......|..++..+ .|++ ++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~~~~~~~--i~ 59 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDD-------------------DVECTMVEKRVLALAWENPF--LT 59 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcc-------------------hHHHHHHHHHHHHhccCCCC--cc
Confidence 3699999999999998 46899999998632100000 001234577777655 4433 23
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
..+. .+..|+||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~D 139 (316)
T cd05620 60 HLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIAD 139 (316)
T ss_pred CeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCc
Confidence 3333 25689999999999998765322 11 23778999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h---
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E--- 314 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~--- 314 (472)
||++....... .....+.+....++|+.+....++.++|+||||+++++++++..+.... .
T Consensus 140 fg~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~ 210 (316)
T cd05620 140 FGMCKENVFGD---------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV 210 (316)
T ss_pred cCCCeecccCC---------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 99986432110 0111223333444666656678899999999999999999976432110 0
Q ss_pred ---hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 ---LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ---~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+..++.+++++|.+|+..+|++|++..++
T Consensus 211 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~ 244 (316)
T cd05620 211 DTPHYPRWITKESKDILEKLFERDPTRRLGVVGN 244 (316)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHH
Confidence 0123468889999999999999999998543
No 78
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.94 E-value=9.6e-27 Score=240.77 Aligned_cols=236 Identities=14% Similarity=0.147 Sum_probs=162.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++.....-. .....+.+|+.+|.++.|+++
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~-------------------~~~~~~~~E~~il~~l~h~~i 63 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNR-------------------NQVAHVKAERDILAEADNEWV 63 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-------------------HHHHHHHHHHHHHHhcCCCCe
Confidence 56778999999999999998 5789999999863210000 001235679999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..|+||||++|++|..++... .+ ..++.||+.+|.|||..||+||||||.||||+.++.++
T Consensus 64 --v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~k 141 (381)
T cd05626 64 --VKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIK 141 (381)
T ss_pred --eeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEE
Confidence 33333 26689999999999998875322 22 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhc----------------cc---------------------cchh-hhhccccccccccccc
Q 012042 242 MIDFPQMVSVSHQNAQMYFD----------------RD---------------------VECI-FKFFRKRFHLNFQETT 283 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~----------------rD---------------------~~~i-~~~f~~~y~~~~~~~~ 283 (472)
|+|||++..........+.. .+ ..+. ..+.++..+++|+...
T Consensus 142 L~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 221 (381)
T cd05626 142 LTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL 221 (381)
T ss_pred EeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc
Confidence 99999975432110000000 00 0000 1233444445666555
Q ss_pred cCCCCcchheeccCchhhhhhhccCCcch-------hhhh----------ccCCCHHHHHHHHHHHhc--CcccCCCCCC
Q 012042 284 DGDDGSDIDTDEGSRLSFASISKTAGFLD-------KELA----------ASGFTRKDQDVIQKFIGG--SIEESGSDDE 344 (472)
Q Consensus 284 ~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~~----------~~~~s~~~~~~l~k~l~~--~p~~R~s~~e 344 (472)
...++.++||||||+++++++++..++.. ..+. ...++.+..++|.+|+.. ++..|+++++
T Consensus 222 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 222 RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 67789999999999999999998654311 0111 124788899999997654 4446999888
Q ss_pred CCCCC
Q 012042 345 GSDDG 349 (472)
Q Consensus 345 ~~~~~ 349 (472)
...-.
T Consensus 302 ~l~hp 306 (381)
T cd05626 302 IKAHP 306 (381)
T ss_pred HhcCc
Confidence 76643
No 79
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94 E-value=1.1e-26 Score=235.26 Aligned_cols=218 Identities=17% Similarity=0.125 Sum_probs=155.8
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
+.||+|+||.||+|.. .+++.||||+++.... .. . .....+.+|..++.++.++. .++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~---~--------------~~~~~~~~e~~~~~~~~~~~-~i~~ 60 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV--HD---D--------------EDIDWVQTEKHVFEQASSNP-FLVG 60 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hh---h--------------hHHHHHHHHHHHHHhhcCCC-CEee
Confidence 3699999999999998 4689999999863210 00 0 00123457888888885431 1233
Q ss_pred eee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 176 AVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 176 ~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
++. .+..|+||||++|++|...+... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++|+||
T Consensus 61 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Df 140 (327)
T cd05617 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDY 140 (327)
T ss_pred EEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEecc
Confidence 332 26689999999999997764321 22 247889999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc------h-------
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL------D------- 312 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l------~------- 312 (472)
|++.....+.. ....+.+....++|+.+....++.++|+||||+++|+++++..++- .
T Consensus 141 g~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 141 GMCKEGLGPGD---------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred ccceeccCCCC---------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 99874322111 0112233333345555567788999999999999999999764331 0
Q ss_pred -hh------hhccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 313 -KE------LAASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 313 -~~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.. ..+..++.++..+|.+||..+|.+|++..
T Consensus 212 ~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 212 FQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 00 01235678889999999999999999975
No 80
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94 E-value=1.6e-26 Score=224.03 Aligned_cols=228 Identities=14% Similarity=0.130 Sum_probs=164.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+++.||.|++|.||.|.+ .+++.||||.++......... .....+.+|+.++.++.|+++
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~-----------------~~~~~~~~e~~~l~~l~~~~i 66 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETK-----------------KEVNALECEIQLLKNLQHERI 66 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhH-----------------HHHHHHHHHHHHHHhCCCCCe
Confidence 45689999999999999998 468999999886432111100 001235679999999988764
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..+++. ...++||||++|++|.+.+... ....++.+++.+|.+||+.||+||||+|.||+++.++.++
T Consensus 67 --~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~ 144 (263)
T cd06625 67 --VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVK 144 (263)
T ss_pred --eeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 333332 6789999999999998865322 1234788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--h------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--K------ 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--~------ 313 (472)
|+|||.+......... ......+.+.....+|+...+..++.++|+||||+++++.+++..+..+ .
T Consensus 145 l~dfg~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 218 (263)
T cd06625 145 LGDFGASKRLQTICSS------GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK 218 (263)
T ss_pred Eeecccceeccccccc------cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH
Confidence 9999998754321110 0000112222333455555566789999999999999999997543211 0
Q ss_pred -------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
...+..++..+.++|.+|+..+|++||+..+-
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 257 (263)
T cd06625 219 IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEEL 257 (263)
T ss_pred HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 01124578889999999999999999997654
No 81
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.94 E-value=7.1e-27 Score=230.64 Aligned_cols=222 Identities=14% Similarity=0.138 Sum_probs=154.3
Q ss_pred eeecceecccCceeEEEEEe-C-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh---
Q 012042 93 TAVGRQLGVGKESDIFEVAR-E-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE--- 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~--- 167 (472)
|.+.+.||+|+||.||+|.+ . +|+.||||+++.....-.. .....+|+.++..+.
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~e~~~l~~l~~~~ 62 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM--------------------PLSTIREVAVLRHLETFE 62 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc--------------------hHHHHHHHHHHHhhcccC
Confidence 56778999999999999987 3 4788999988643211000 012335777777664
Q ss_pred hCCCCcceeeec---------CCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 168 DHGFPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 168 ~~gi~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
|+++ +.+++. ...++||||++| +|..++... . ...++.+|+.+|.|||+.||+||||||.
T Consensus 63 hpni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~ 139 (290)
T cd07862 63 HPNV--VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQ 139 (290)
T ss_pred CCCc--ceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHH
Confidence 5432 333331 347899999985 666654321 1 1247899999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
|||++.++.++|+|||.+....... ......+...+.+|+.+....++.++|+||||+++++++++...+
T Consensus 140 Nil~~~~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f 209 (290)
T cd07862 140 NILVTSSGQIKLADFGLARIYSFQM----------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 209 (290)
T ss_pred HEEEcCCCCEEEccccceEeccCCc----------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCc
Confidence 9999999999999999997543221 011112233334555555677899999999999999998865322
Q ss_pred ch---h----h---------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 LD---K----E---------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 l~---~----~---------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
-. . . .....++..++++|.+||..+|++|||+.|-..
T Consensus 210 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 210 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 10 0 0 001246677789999999999999999877553
No 82
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.94 E-value=4.5e-27 Score=229.49 Aligned_cols=214 Identities=18% Similarity=0.196 Sum_probs=167.3
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
++...||.|+||.|.+++. .+|..+|+|++... .+ ++.++ ......|-.+|+.+.+
T Consensus 47 e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~-----~v------VklKQ--------veH~~nEk~vL~~v~~---- 103 (355)
T KOG0616|consen 47 ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ-----KV------VKLKQ--------VEHTHNEKRVLKAVSH---- 103 (355)
T ss_pred hheeeeccCccceEEEEEEccCCceeehhhcCHH-----HH------HHHHH--------HHHHhhHHHHHhhccC----
Confidence 3457899999999999999 57999999998532 11 11110 1234568889998885
Q ss_pred cceeee-------cCCceeEEeecCCCChhhhhcc--C--Ch--HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 173 VPNAVD-------CNRHCVIMSLVQGYPLVQVNQL--Q--NP--DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 173 vP~~i~-------~~~~~LVMEyi~G~~L~~l~~~--~--~~--~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
|.++. ....|+||||++|+.|..++.. . .+ .-++.+|+.|++|||.++|++|||||+|||++.+|.
T Consensus 104 -PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~ 182 (355)
T KOG0616|consen 104 -PFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH 182 (355)
T ss_pred -ceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc
Confidence 44332 3678999999999999987643 1 22 237789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+||+|||+|+.... .+.+.++++-+++|++.....++...|-|+||+.+|+++.+.+++.+.
T Consensus 183 iKitDFGFAK~v~~------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY 250 (355)
T KOG0616|consen 183 IKITDFGFAKRVSG------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIY 250 (355)
T ss_pred EEEEeccceEEecC------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHH
Confidence 99999999986532 133456777777888888899999999999999999999987654321
Q ss_pred -hh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 -EL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 -~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.| -++.|+...+++|.++|+.|...|...-
T Consensus 251 ~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnl 287 (355)
T KOG0616|consen 251 EKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNL 287 (355)
T ss_pred HHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCc
Confidence 11 2577999999999999999999995443
No 83
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.94 E-value=1e-26 Score=238.85 Aligned_cols=234 Identities=14% Similarity=0.129 Sum_probs=160.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+++.||||+++... ... ......+.+|..++.++.|+++
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~-----------------~~~~~~~~~E~~il~~~~~~~i 63 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKAD--MLE-----------------KEQVGHIRAERDILVEADSLWV 63 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHH--HHH-----------------hhHHHHHHHHHHHHHhCCCCCc
Confidence 46678999999999999988 468999999986321 000 0011235578999999987643
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+..+. ....||||||++|++|..++... . ...++.|++.+|.|||++||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vk 141 (363)
T cd05628 64 --VKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVK 141 (363)
T ss_pred --ceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEE
Confidence 33333 25689999999999998876422 1 234788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhc-------cc------------------c-chhhhhccccccccccccccCCCCcchheec
Q 012042 242 MIDFPQMVSVSHQNAQMYFD-------RD------------------V-ECIFKFFRKRFHLNFQETTDGDDGSDIDTDE 295 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~-------rD------------------~-~~i~~~f~~~y~~~~~~~~~~~~~~~sDiyS 295 (472)
|+|||++..........+.. .+ . .....++++..+++|+......++.++|+||
T Consensus 142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwS 221 (363)
T cd05628 142 LSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (363)
T ss_pred EeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhh
Confidence 99999987543211000000 00 0 0011233444445666556778899999999
Q ss_pred cCchhhhhhhccCCcch-------hhhh----------ccCCCHHHHHHHHHHHhcCccc---CCCCCCCCCC
Q 012042 296 GSRLSFASISKTAGFLD-------KELA----------ASGFTRKDQDVIQKFIGGSIEE---SGSDDEGSDD 348 (472)
Q Consensus 296 lG~~~f~~~t~~~~~l~-------~~~~----------~~~~s~~~~~~l~k~l~~~p~~---R~s~~e~~~~ 348 (472)
||+++|+++++..++.. ..+. ...++.+.+++|.+|+. +|++ ||+.++-..-
T Consensus 222 lGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 222 LGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred hHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 99999999998654311 0111 12467888899998875 5554 4666666553
No 84
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.94 E-value=8.9e-27 Score=238.02 Aligned_cols=223 Identities=14% Similarity=0.153 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||.+......... ...+.+|+.+++.+.|+++
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~ni 78 (355)
T cd07874 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH--------------------AKRAYRELVLMKCVNHKNI 78 (355)
T ss_pred eeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHH--------------------HHHHHHHHHHHHHhCCCch
Confidence 67789999999999999998 46899999987532111110 1134579999999988763
Q ss_pred Ccceeeec----------CCceeEEeecCCCChhhhhccC-C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ-N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~-~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
..+++. ...|+||||+++. |.+.+... . ...++.|++.+|.|||++||+||||||.|||++.+
T Consensus 79 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~ 155 (355)
T cd07874 79 --ISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155 (355)
T ss_pred --hceeeeeeccccccccceeEEEhhhhccc-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCC
Confidence 222221 3468999999875 43333222 1 22478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchhh---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDKE--- 314 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~~--- 314 (472)
+.++|+|||++....... ....+.++....+|+.+.+..++.++|+||||+++++++++...+....
T Consensus 156 ~~~kl~Dfg~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 225 (355)
T cd07874 156 CTLKILDFGLARTAGTSF----------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225 (355)
T ss_pred CCEEEeeCcccccCCCcc----------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999999997543211 1112233444456665566778999999999999999988653211000
Q ss_pred -----------------------h-----------------------------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 315 -----------------------L-----------------------------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 315 -----------------------~-----------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
+ .....+..+.++|.+|+..+|++|||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~ 305 (355)
T cd07874 226 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305 (355)
T ss_pred HHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH
Confidence 0 001123466799999999999999999
Q ss_pred CCCCCC
Q 012042 343 DEGSDD 348 (472)
Q Consensus 343 ~e~~~~ 348 (472)
++-..-
T Consensus 306 ~ell~h 311 (355)
T cd07874 306 DEALQH 311 (355)
T ss_pred HHHhcC
Confidence 987764
No 85
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94 E-value=1e-26 Score=236.38 Aligned_cols=221 Identities=19% Similarity=0.156 Sum_probs=162.7
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|+||.||+|.+. +|..+|+|+........ ....+.+|+.+|.++.|+++
T Consensus 7 y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i 65 (333)
T cd06650 7 FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPA---------------------IRNQIIRELQVLHECNSPYI 65 (333)
T ss_pred hheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHH---------------------HHHHHHHHHHHHHHCCCCcc
Confidence 566789999999999999984 78999999876432110 01235689999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++ .+..++||||++|++|.+++... .+ ..++.+++.+|.|||. ++|+||||||.|||++.++.+
T Consensus 66 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~ 143 (333)
T cd06650 66 --VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 143 (333)
T ss_pred --cceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCE
Confidence 33333 26789999999999998876422 11 2477899999999997 589999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---hh---
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---KE--- 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~~--- 314 (472)
+|+|||++........ ..+.+.....+|+.+.+..++.++|+||||+++++++++..+... ..
T Consensus 144 kL~Dfg~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~ 212 (333)
T cd06650 144 KLCDFGVSGQLIDSMA-----------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELEL 212 (333)
T ss_pred EEeeCCcchhhhhhcc-----------ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHH
Confidence 9999999864422111 112233233455555567789999999999999999887532110 00
Q ss_pred -----------------------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 315 -----------------------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 315 -----------------------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
+....++.+++++|.+||+.+|++||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt 292 (333)
T cd06650 213 MFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERAD 292 (333)
T ss_pred HhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcC
Confidence 001136778899999999999999999
Q ss_pred CCCCCC
Q 012042 342 DDEGSD 347 (472)
Q Consensus 342 ~~e~~~ 347 (472)
..+...
T Consensus 293 ~~ell~ 298 (333)
T cd06650 293 LKQLMV 298 (333)
T ss_pred HHHHhh
Confidence 998865
No 86
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.94 E-value=2e-27 Score=246.85 Aligned_cols=227 Identities=12% Similarity=0.151 Sum_probs=159.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+++..+||+|+||.||+|+. .+|..+|+|+++... . +...+. ...+.|-.+|....++.
T Consensus 143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~--M---------~~~~Qv--------~hV~aERdiL~~~ds~~- 202 (550)
T KOG0605|consen 143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE--M---------LKKNQV--------EHVRAERDILAEVDSPW- 202 (550)
T ss_pred chhheeeccccceeEEEEEEccCCcEEeeecccHHH--H---------HhhhhH--------HHHHHHHHHhhhcCCCc-
Confidence 56679999999999999998 469999999987321 1 111110 12334667776644432
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+.+. ....||||||++||++..++... . ..-++.+++-||..+|++|+|||||||+|+||+..|++|
T Consensus 203 -vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiK 281 (550)
T KOG0605|consen 203 -VVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIK 281 (550)
T ss_pred -EEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEe
Confidence 223222 26789999999999998876432 2 233778899999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchh--------------hhccccc------------------------hhhhhccccccccccccc
Q 012042 242 MIDFPQMVSVSHQNAQM--------------YFDRDVE------------------------CIFKFFRKRFHLNFQETT 283 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~--------------~l~rD~~------------------------~i~~~f~~~y~~~~~~~~ 283 (472)
|.|||+|..+...+-.. ....+.. -...+++++=+++|++..
T Consensus 282 LSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll 361 (550)
T KOG0605|consen 282 LSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL 361 (550)
T ss_pred eccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh
Confidence 99999986432100000 0000100 111345666667888877
Q ss_pred cCCCCcchheeccCchhhhhhhccCCcch-------hhhh----------ccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 284 DGDDGSDIDTDEGSRLSFASISKTAGFLD-------KELA----------ASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 284 ~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
+..++..||.||+|+++||++.+-+++-. ..+. ....+.+-.++|.+||- +|++|--
T Consensus 362 ~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 362 GKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred cCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 88899999999999999999998654310 1111 13356777799999999 9999966
No 87
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.94 E-value=1.3e-26 Score=228.37 Aligned_cols=221 Identities=14% Similarity=0.155 Sum_probs=153.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh---h
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE---D 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~---~ 168 (472)
|++.+.||+|+||.||+|.+ .+|+.||||.++........ .....+|+.++.++. |
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------~~~~~~e~~~l~~l~~~~h 61 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL--------------------PLSTVREVALLKRLEAFDH 61 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC--------------------chHHHHHHHHHHHhhhcCC
Confidence 56778999999999999998 47999999988642111000 012335777777764 3
Q ss_pred CCCCcceeeec---------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 169 HGFPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 169 ~gi~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
+++ ..+++. ...+++|||+++ +|..++... .+ ..++.||+.+|.|||+.||+||||||.|
T Consensus 62 ~ni--~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N 138 (288)
T cd07863 62 PNI--VRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 138 (288)
T ss_pred CCe--eeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 332 223321 236899999986 565554221 11 2478899999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
||++.++.++|+|||.+........ .....+.....+|+.+....++.++|+||+|+++++++++...+.
T Consensus 139 ili~~~~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 139 ILVTSGGQVKLADFGLARIYSCQMA----------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred EEECCCCCEEECccCccccccCccc----------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 9999999999999999875532211 011122223345555556778999999999999999987653211
Q ss_pred h--------h--------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 D--------K--------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 ~--------~--------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. . ......++.++.++|.+||..+|++|||+.+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 209 GNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred CCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 0 0 000124667788999999999999999987643
No 88
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94 E-value=1.1e-26 Score=235.13 Aligned_cols=217 Identities=12% Similarity=0.120 Sum_probs=148.5
Q ss_pred ecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh---hCCCCcc
Q 012042 99 LGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE---DHGFPVP 174 (472)
Q Consensus 99 IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~---~~gi~vP 174 (472)
||+|+||.||+|.+ .+|+.||||++.... +.. .. .......|..++.++. |++ ++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~--~~~---~~--------------~~~~~~~e~~~l~~~~~~~~p~--i~ 59 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKE--IVA---KK--------------EVAHTIGERNILVRTLLDESPF--IV 59 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHH--Hhh---hh--------------HHHHHHHHHHHHHHhccCCCCc--Cc
Confidence 79999999999998 469999999875211 100 00 0011234556665553 322 22
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.++. .+..|+||||++|++|...+... . ...++.||+.+|.|||++||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~D 139 (330)
T cd05586 60 GLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCD 139 (330)
T ss_pred ceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEec
Confidence 2222 25689999999999997765322 1 224788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcch-------hh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLD-------KE-- 314 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~-- 314 (472)
||++....... .....+.++..+++|+.... ..++.++|+||||+++|+++++..+... ..
T Consensus 140 fg~a~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~ 210 (330)
T cd05586 140 FGLSKANLTDN---------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA 210 (330)
T ss_pred CCcCcCCCCCC---------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH
Confidence 99986432111 01112233333345554433 3478999999999999999997644211 01
Q ss_pred -----hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 -----LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 -----~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+....++....++|.+||..+|.+||++...
T Consensus 211 ~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~ 246 (330)
T cd05586 211 FGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRD 246 (330)
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCC
Confidence 1123478888999999999999999976544
No 89
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94 E-value=8.7e-27 Score=233.17 Aligned_cols=224 Identities=15% Similarity=0.140 Sum_probs=159.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||.++....... ...+.+|+.++.++.|+++
T Consensus 8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~h~~i 66 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA---------------------PCTAIREVSLLKDLKHANI 66 (309)
T ss_pred eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc---------------------chhHHHHHHHHHhCCCCCc
Confidence 567899999999999999984 688999998864321100 0123479999999988764
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc-C---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL-Q---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~-~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++. +..++||||+++ +|...+.. . . ...++.||+.+|.+||++||+||||||.|||++.++.+
T Consensus 67 --v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~ 143 (309)
T cd07872 67 --VTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGEL 143 (309)
T ss_pred --ceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence 333332 668999999987 55554321 1 1 22477899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||.+.....+... ...........+|+.+. ...++.++|+||||+++++++++...+...
T Consensus 144 kl~Dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~ 214 (309)
T cd07872 144 KLADFGLARAKSVPTKT---------YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDEL 214 (309)
T ss_pred EECccccceecCCCccc---------cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 99999998754322111 00111222333455432 356889999999999999999975322100
Q ss_pred --h-----------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 --E-----------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 --~-----------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
. .....++.+..++|.+||..+|.+|||++|.....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 215 HLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred HHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 0 00123577888999999999999999998877644
No 90
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-26 Score=237.73 Aligned_cols=230 Identities=14% Similarity=0.143 Sum_probs=163.9
Q ss_pred ccHHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcch-hHHhhhhhHHhhhccchhhHHHhHHHH
Q 012042 78 YDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTS-FRAVKSKRDYLRHRNSYNWLYLSRLAA 156 (472)
Q Consensus 78 ~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~s-f~~~k~~r~yl~~~~~~~~~~~~r~~a 156 (472)
|++-.+....+. +.-.+.||+|+||.||+|...+|..||||.+...... .+ .+
T Consensus 65 fs~~el~~AT~~---Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~-----------------------eF 118 (361)
T KOG1187|consen 65 FSYDELRKATNN---FSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGER-----------------------EF 118 (361)
T ss_pred eeHHHHHHHHhC---CchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchh-----------------------HH
Confidence 455555555433 2224789999999999999998899999977543221 11 14
Q ss_pred HHHHHHHHHhhhCCCCcceeeec----C-CceeEEeecCCCChhhhhccCC-----h---HHHHHHHHHHHHHHHHC---
Q 012042 157 LKEFAFMKALEDHGFPVPNAVDC----N-RHCVIMSLVQGYPLVQVNQLQN-----P---DSVFETIIGLVVRLAEH--- 220 (472)
Q Consensus 157 ~rE~~~L~~L~~~gi~vP~~i~~----~-~~~LVMEyi~G~~L~~l~~~~~-----~---~~i~~qIl~aL~~LH~~--- 220 (472)
..|+.+|.+++|+++ .+++++ + ..+||+||+++++|.+.+.... . -.|+..++.+|.|||..
T Consensus 119 ~~Ei~~ls~l~H~Nl--v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~ 196 (361)
T KOG1187|consen 119 LNEVEILSRLRHPNL--VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPP 196 (361)
T ss_pred HHHHHHHhcCCCcCc--ccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCC
Confidence 579999999998653 445554 4 3899999999999988765432 1 25899999999999974
Q ss_pred CceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCch
Q 012042 221 GLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRL 299 (472)
Q Consensus 221 GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~ 299 (472)
.||||||||.|||+|.+..+||+|||+|+.. |.. ...+.....+.+||.+++| ..+.++.++||||||++
T Consensus 197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~--~~~-------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVv 267 (361)
T KOG1187|consen 197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLG--PEG-------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVV 267 (361)
T ss_pred CEecCCCCHHHeeECCCCCEEccCccCcccC--Ccc-------ccceeeecCCCCccCChhhhccCCcCcccccccchHH
Confidence 3999999999999999999999999999643 210 0111111145678866665 46899999999999999
Q ss_pred hhhhhhccCCc-----------chh----------------hhhccCCC--HHH---HHHHHHHHhcCcccCCCCCC
Q 012042 300 SFASISKTAGF-----------LDK----------------ELAASGFT--RKD---QDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 300 ~f~~~t~~~~~-----------l~~----------------~~~~~~~s--~~~---~~~l~k~l~~~p~~R~s~~e 344 (472)
+++.+|++... .++ .+....+. +.+ ..+..+|++.+|.+||+..+
T Consensus 268 llElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~ 344 (361)
T KOG1187|consen 268 LLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQ 344 (361)
T ss_pred HHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHH
Confidence 99999975310 111 11102233 233 35567889999999999765
No 91
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.94 E-value=1.9e-26 Score=238.18 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=161.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++.... ... + .....+.+|+.+|..+.|+++
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~----~-------------~~~~~~~~e~~il~~~~h~~i 105 (370)
T cd05596 45 FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE--MIK----R-------------SDSAFFWEERDIMAHANSEWI 105 (370)
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--hhh----h-------------hhHHHHHHHHHHHHhCCCCCc
Confidence 56678999999999999998 468999999985210 000 0 001124578999999988654
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+..+.. +..|+||||++|++|..++... .+ ..++.+|+.+|.|||++||+||||||.|||++.++.++|
T Consensus 106 --v~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL 183 (370)
T cd05596 106 --VQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKL 183 (370)
T ss_pred --ceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEE
Confidence 333322 5689999999999998876432 22 236789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhcccccccccccccc----CCCCcchheeccCchhhhhhhccCCcch------
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD----GDDGSDIDTDEGSRLSFASISKTAGFLD------ 312 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~----~~~~~~sDiySlG~~~f~~~t~~~~~l~------ 312 (472)
+|||.+........ . ......+...+++|+.+.. ..++.++|+||||+++|+++++..++..
T Consensus 184 ~DfG~~~~~~~~~~---~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~ 255 (370)
T cd05596 184 ADFGTCMKMDANGM---V-----RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 255 (370)
T ss_pred EeccceeeccCCCc---c-----cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH
Confidence 99999975532211 0 0011223333445554422 3478999999999999999998654321
Q ss_pred -hhhh----------ccCCCHHHHHHHHHHHhcCccc--CCCCCCCCCC
Q 012042 313 -KELA----------ASGFTRKDQDVIQKFIGGSIEE--SGSDDEGSDD 348 (472)
Q Consensus 313 -~~~~----------~~~~s~~~~~~l~k~l~~~p~~--R~s~~e~~~~ 348 (472)
..+. ...++.+..++|.+||..+|.+ |+++++...-
T Consensus 256 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 256 YSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0110 1246888899999999988886 9998877653
No 92
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.94 E-value=7.9e-27 Score=246.83 Aligned_cols=221 Identities=14% Similarity=0.089 Sum_probs=156.4
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+++.||+|+||.||+|.+ .+++.||||.+..... ...+|+.+|..+.|++
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~--------------------------~~~~Ei~il~~l~h~n 120 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ--------------------------YKNRELLIMKNLNHIN 120 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc--------------------------hHHHHHHHHHhcCCCC
Confidence 478899999999999999998 4689999998742210 1236999999998876
Q ss_pred CCcc-eeee-----c----CCceeEEeecCCCChhhhhc------cCCh----HHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 171 FPVP-NAVD-----C----NRHCVIMSLVQGYPLVQVNQ------LQNP----DSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 171 i~vP-~~i~-----~----~~~~LVMEyi~G~~L~~l~~------~~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
+... ..+. . ...++||||++|. |..++. ...+ ..++.||+.+|.|||++||+||||||.
T Consensus 121 iv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~ 199 (440)
T PTZ00036 121 IIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQ 199 (440)
T ss_pred CcceeeeEeecccccCCCceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHH
Confidence 4211 1110 0 1256899999874 433321 1111 246789999999999999999999999
Q ss_pred cEEEcCCC-cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccC
Q 012042 231 NIMIDDDE-KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 231 NILl~~~g-~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
|||++.++ .++|+|||+|....... ....+.+..++++|+.+.+ ..++.++||||||+++++++++..
T Consensus 200 NILl~~~~~~vkL~DFGla~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~ 269 (440)
T PTZ00036 200 NLLIDPNTHTLKLCDFGSAKNLLAGQ----------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYP 269 (440)
T ss_pred HEEEcCCCCceeeeccccchhccCCC----------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99998654 69999999997543211 1112334444556665433 468999999999999999999754
Q ss_pred Ccchh--------h----------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 309 GFLDK--------E----------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 309 ~~l~~--------~----------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+... . ..+.+.+.+..++|.+||..+|.+|+|+.+..
T Consensus 270 pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 270 IFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 32110 0 00123567788999999999999999998877
Q ss_pred CCC
Q 012042 347 DDG 349 (472)
Q Consensus 347 ~~~ 349 (472)
...
T Consensus 350 ~hp 352 (440)
T PTZ00036 350 ADP 352 (440)
T ss_pred CCh
Confidence 644
No 93
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.94 E-value=1.6e-26 Score=236.98 Aligned_cols=228 Identities=12% Similarity=0.128 Sum_probs=158.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.. .+|+.||||+++....... .....+.+|..+|..+.|+++
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~~~~i 63 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEK-------------------EQVAHIRAERDILVEADGAWV 63 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhh-------------------hhHHHHHHHHHHHHhCCCCCE
Confidence 45678999999999999998 4699999999863210000 001234578899999987643
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+..+. .+..||||||++|++|..++... .+ ..++.|++.+|.|||+.||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vk 141 (360)
T cd05627 64 --VKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVK 141 (360)
T ss_pred --eeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEE
Confidence 33332 25689999999999998875422 12 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhc------------cc--------------cchhhhhccccccccccccccCCCCcchheec
Q 012042 242 MIDFPQMVSVSHQNAQMYFD------------RD--------------VECIFKFFRKRFHLNFQETTDGDDGSDIDTDE 295 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~------------rD--------------~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiyS 295 (472)
|+|||++............. .. ......+.++..+++|+......++.++|+||
T Consensus 142 L~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS 221 (360)
T cd05627 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (360)
T ss_pred EeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecc
Confidence 99999987543211100000 00 00011223444445666556778899999999
Q ss_pred cCchhhhhhhccCCcchh-------hhh----------ccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 296 GSRLSFASISKTAGFLDK-------ELA----------ASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 296 lG~~~f~~~t~~~~~l~~-------~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
||+++++++++..++... .+. ...++.+.+++|.+|+. +|++|++.
T Consensus 222 lGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~ 284 (360)
T cd05627 222 LGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS 284 (360)
T ss_pred ccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC
Confidence 999999999976432110 011 12367888899999874 99999875
No 94
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=5.4e-27 Score=248.16 Aligned_cols=223 Identities=17% Similarity=0.171 Sum_probs=173.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCc-chhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGR-TSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~-~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
+.+++-||.|+.|.|-+|++ .+|+.+|||++.... .+-. ....+++|+.+|+-|.|++
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s--------------------~~~~IerEIviMkLi~Hpn 73 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSS--------------------QPAGIEREIVIMKLIEHPN 73 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccc--------------------cccchhhhhHHHHHhcCCC
Confidence 67889999999999999999 689999999985321 0000 0124568999999999865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ -..|+. ...|||.||++||.|.+++-.. ....+|.||+.++.|+|..+|+||||||+|+|++..++|
T Consensus 74 V--l~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nI 151 (786)
T KOG0588|consen 74 V--LRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNI 151 (786)
T ss_pred e--eeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCE
Confidence 3 444443 5689999999999998875322 233589999999999999999999999999999998899
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchhh-----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDKE----- 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~~----- 314 (472)
||+|||+|..- - .-..+.+.++.+.+..|++..+ ...+.++||||+|+++|.++|++-++-|..
T Consensus 152 KIADFGMAsLe-~---------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LL 221 (786)
T KOG0588|consen 152 KIADFGMASLE-V---------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLL 221 (786)
T ss_pred eeeccceeecc-c---------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHH
Confidence 99999999521 1 2234556677777777777644 556889999999999999999875442211
Q ss_pred --------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 --------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 --------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
-.++.++.+-|.+|.+|++-||+.|.+.++=..
T Consensus 222 lKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 222 LKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred HHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 124779999999999999999999998877544
No 95
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.94 E-value=1.8e-26 Score=224.22 Aligned_cols=221 Identities=13% Similarity=0.066 Sum_probs=160.1
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC-
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF- 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi- 171 (472)
|++.+.||+|+||.||+|...++..||+|.++...... ..+.+|+.++.++.|+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~-----------------------~~~~~E~~~l~~l~~~~i~ 64 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP-----------------------ESFLEEAQIMKKLRHDKLV 64 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCCCCCH-----------------------HHHHHHHHHHHhcCCCceE
Confidence 45678999999999999988888889999886432111 124579999999988653
Q ss_pred CcceeeecCCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 172 PVPNAVDCNRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 172 ~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
.....+.....+++|||++|++|.+++... . ...++.+++.+|.|||+.||+||||||.||++++++.++|+
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~ 144 (260)
T cd05070 65 QLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIA 144 (260)
T ss_pred EEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeC
Confidence 111122235679999999999998875321 1 13478899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch-------hh
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD-------KE 314 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~-------~~ 314 (472)
|||.+......... ...... ..+.| +|+......++.++|+||||++++++++ +..+... ..
T Consensus 145 dfg~~~~~~~~~~~--------~~~~~~-~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 215 (260)
T cd05070 145 DFGLARLIEDNEYT--------ARQGAK-FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 215 (260)
T ss_pred CceeeeeccCcccc--------cccCCC-CCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99999755322110 000111 12333 4444455778999999999999999998 4332110 00
Q ss_pred h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+ ....++..+.++|.+|+..+|++|||.++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 253 (260)
T cd05070 216 VERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYL 253 (260)
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHH
Confidence 1 123467889999999999999999998754
No 96
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94 E-value=2e-26 Score=227.31 Aligned_cols=225 Identities=12% Similarity=0.021 Sum_probs=161.2
Q ss_pred eeeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
.|.+.+.||+|+||.||+|.. .++..||||.++.... ... ...+.+|+.+|.++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~--------------------~~~~~~e~~~l~~l 63 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNH--------------------IADLKKEIEILRNL 63 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHH--------------------HHHHHHHHHHHHhC
Confidence 456778999999999999974 3578899998763311 100 11356899999999
Q ss_pred hhCCCCcceeeec------CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 167 EDHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 167 ~~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
.|+++ +..++. ...++||||++|++|..++... . ...++.+++.+|.+||+.||+||||||.|||
T Consensus 64 ~h~~i--~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil 141 (284)
T cd05079 64 YHENI--VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVL 141 (284)
T ss_pred CCCCe--eeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEE
Confidence 88653 222221 3578999999999998876321 1 1247889999999999999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL-- 311 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l-- 311 (472)
++.++.++|+|||.+.....+...... ...+.+..+.++|+.+....++.++|+||||++++++++......
T Consensus 142 ~~~~~~~~l~dfg~~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~ 215 (284)
T cd05079 142 VESEHQVKIGDFGLTKAIETDKEYYTV------KDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSP 215 (284)
T ss_pred EcCCCCEEECCCccccccccCccceee------cCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccc
Confidence 999999999999998765432221100 011222233456665556778999999999999999987432100
Q ss_pred -----------------hh----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 312 -----------------DK----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 312 -----------------~~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. .-....++..+.++|.+|+..+|++||+..+-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 276 (284)
T cd05079 216 MTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNL 276 (284)
T ss_pred cchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 00 00134578899999999999999999998764
No 97
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.94 E-value=2.8e-26 Score=223.21 Aligned_cols=221 Identities=14% Similarity=0.097 Sum_probs=158.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC-
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF- 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi- 171 (472)
+.+...||+|++|.||+|.+..+..+|||..+..... ...+.+|+.++.++.|+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~-----------------------~~~~~~E~~~l~~l~h~~i~ 64 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-----------------------PEAFLQEAQIMKKLRHDKLV 64 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc-----------------------HHHHHHHHHHHHhCCCCCee
Confidence 5677899999999999998876678999987543211 1124579999999988763
Q ss_pred CcceeeecCCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 172 PVPNAVDCNRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 172 ~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
++...+..+..+++|||++|++|.+++... . ...++.+++.+|.|||+.||+|+||||.||++++++.++|+
T Consensus 65 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~ 144 (260)
T cd05069 65 PLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIA 144 (260)
T ss_pred eEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEEC
Confidence 111122236689999999999998876321 1 12478899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc---hh----h
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL---DK----E 314 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l---~~----~ 314 (472)
|||.+.......... .. .......| +|+......++.++|+||||++++++++ +..+.. +. .
T Consensus 145 dfg~~~~~~~~~~~~--------~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05069 145 DFGLARLIEDNEYTA--------RQ-GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ 215 (260)
T ss_pred CCccceEccCCcccc--------cC-CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999997553221100 00 01112333 3443355778999999999999999998 432211 10 0
Q ss_pred h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+ ....++..+++++.+|+..+|++||+.++-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 253 (260)
T cd05069 216 VERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYI 253 (260)
T ss_pred HHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHH
Confidence 0 123467889999999999999999998653
No 98
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.94 E-value=1.6e-26 Score=233.12 Aligned_cols=218 Identities=13% Similarity=0.094 Sum_probs=155.7
Q ss_pred ceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCCCCcc
Q 012042 97 RQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~gi~vP 174 (472)
+.||+|+||.||+|.+. +++.||||+++....... . ......+|..++..+. |++ ++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~--------------~~~~~~~e~~il~~~~~h~~--i~ 59 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQD-----D--------------DVECTMTEKRVLALAGKHPF--LT 59 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh-----h--------------HHHHHHHHHHHHHhccCCCC--cc
Confidence 36899999999999984 688999999863210000 0 0112346778887774 443 33
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
..++ .+..|+||||++|++|...+... .+ ..++.||+.+|.|||+.||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~D 139 (318)
T cd05570 60 QLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIAD 139 (318)
T ss_pred ceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecc
Confidence 4333 25689999999999997765322 12 24788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------hhh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KEL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~-- 315 (472)
||++........ ....+.+....++|+.+.+..++.++|+||||+++++++++..+... ..+
T Consensus 140 fg~~~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~ 210 (318)
T cd05570 140 FGMCKEGILGGV---------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE 210 (318)
T ss_pred cCCCeecCcCCC---------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence 999864321111 11112233333455555677889999999999999999997643211 001
Q ss_pred ----hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 316 ----AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 316 ----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.+..++.++.++|.+|+..+|.+||++.+
T Consensus 211 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~ 243 (318)
T cd05570 211 DEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLP 243 (318)
T ss_pred CCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCC
Confidence 12457888999999999999999999954
No 99
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94 E-value=2.7e-26 Score=226.05 Aligned_cols=223 Identities=13% Similarity=0.114 Sum_probs=163.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+++.+.||+|+||.||+|.+ .+++.||||+.......- ....+.+|+.+|.++.|+++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i 61 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVE---------------------LQKQIMSELEILYKCDSPYI 61 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChH---------------------HHHHHHHHHHHHHhCCCCCe
Confidence 34568899999999999998 578999999886431110 01135579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccCC--hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN--PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~--~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
..+++ .+..++||||++|++|........ ...++.+++.+|.+||+.||+|+||||.|||++.++.++|+||
T Consensus 62 --v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~df 139 (279)
T cd06619 62 --IGFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDF 139 (279)
T ss_pred --eeEEEEEEECCEEEEEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeC
Confidence 33333 266889999999999876533222 2358899999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----------h--
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----------K-- 313 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----------~-- 313 (472)
|++.....+.. ..+++.....+|+......++.++|+||||+++++++++..+... .
T Consensus 140 g~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 208 (279)
T cd06619 140 GVSTQLVNSIA-----------KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL 208 (279)
T ss_pred Ccceecccccc-----------cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence 99975532211 112222233355555567789999999999999999987533210 0
Q ss_pred ----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 ----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+....++.++.++|.+|+..+|++||+.++-..-.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 209 LQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred HHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 001234677899999999999999999988766543
No 100
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.94 E-value=1.6e-26 Score=239.18 Aligned_cols=223 Identities=14% Similarity=0.108 Sum_probs=156.8
Q ss_pred eeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+++.||+|+||.||+|.. .++..||||+++..... . ....+.+|+.+|..+
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~--------------------~~~~~~~Ei~il~~l 95 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-T--------------------EREALMSELKVLSYL 95 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-H--------------------HHHHHHHHHHHHHHh
Confidence 67789999999999999964 24668999988632110 0 012345799999999
Q ss_pred -hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC----------------------------------------
Q 012042 167 -EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---------------------------------------- 201 (472)
Q Consensus 167 -~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---------------------------------------- 201 (472)
.|+++ +.+++. +..++||||++|++|..++...
T Consensus 96 ~~HpnI--v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 173 (375)
T cd05104 96 GNHINI--VNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKP 173 (375)
T ss_pred cCCcce--eeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCC
Confidence 55442 333332 5689999999999997765211
Q ss_pred --------------------------------------C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 202 --------------------------------------N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 202 --------------------------------------~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
. ...++.+|+.+|.|||++||+||||||.|||++.++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~ 253 (375)
T cd05104 174 GVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRIT 253 (375)
T ss_pred CcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcE
Confidence 0 01367799999999999999999999999999998999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc----hh-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL----DK- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l----~~- 313 (472)
+|+|||++.......... ..........| +|+......++.++|+||||++++++++ +..+.. +.
T Consensus 254 kl~DfG~a~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~ 325 (375)
T cd05104 254 KICDFGLARDIRNDSNYV--------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK 325 (375)
T ss_pred EEecCccceeccCccccc--------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH
Confidence 999999997653221100 00001112233 4554456789999999999999999887 332211 00
Q ss_pred ---h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ---E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ---~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. ..+...+.++.++|.+|+..+|++|||..+-.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 368 (375)
T cd05104 326 FYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIV 368 (375)
T ss_pred HHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 0 01223567899999999999999999987653
No 101
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.94 E-value=1.3e-26 Score=233.84 Aligned_cols=219 Identities=15% Similarity=0.088 Sum_probs=154.3
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~vP 174 (472)
+.||+|+||.||+|.+ .+++.||||+++........ .......|..++..+ .|+++ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~~~~hp~i--v 59 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDD-------------------DVECTMVEKRVLSLAWEHPFL--T 59 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcc-------------------hHHHHHHHHHHHHhccCCCcC--c
Confidence 3689999999999998 46889999998632100000 001233566777654 45432 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
..+. .+..++||||++|++|...+... . ...++.|++.+|.|||+.||+||||||.|||++.++.++|+|
T Consensus 60 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~D 139 (316)
T cd05619 60 HLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIAD 139 (316)
T ss_pred ceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEcc
Confidence 3332 25678999999999998875321 1 124788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h---
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E--- 314 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~--- 314 (472)
||++........ ....+.+....++|+......++.++|+||||+++++++++..+.... .
T Consensus 140 fg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~ 210 (316)
T cd05619 140 FGMCKENMLGDA---------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM 210 (316)
T ss_pred CCcceECCCCCC---------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 999875321111 011122333334555555677899999999999999999976432110 0
Q ss_pred ---hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 ---LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ---~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+..++.+..++|.+|+..+|++|++..++
T Consensus 211 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 244 (316)
T cd05619 211 DNPCYPRWLTREAKDILVKLFVREPERRLGVKGD 244 (316)
T ss_pred CCCCCCccCCHHHHHHHHHHhccCHhhcCCChHH
Confidence 1123477888999999999999999999743
No 102
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.94 E-value=2.1e-26 Score=223.52 Aligned_cols=219 Identities=14% Similarity=0.104 Sum_probs=159.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+++.+.||+|+||.||+|...++..||+|.+...... ...+.+|+.++.++.|+++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-----------------------~~~~~~e~~~l~~l~h~~i- 63 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-----------------------VQAFLEEANLMKTLQHDKL- 63 (261)
T ss_pred eEEeeecCCcCCceEEEEEecCCceEEEEEccCCchh-----------------------HHHHHHHHHHHHhCCCCCe-
Confidence 5678999999999999999877888999987533211 1134579999999988654
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC-----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
...++ .+..+++|||++|++|.+++... .. ..++.+++.+|.|||..|++||||||.||+++.++.+
T Consensus 64 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~ 142 (261)
T cd05072 64 -VRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMC 142 (261)
T ss_pred -eeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcE
Confidence 33332 26679999999999998875321 11 2377899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD------ 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~------ 312 (472)
+|+|||.+......... .... ......| +|+......++.++|+||||++++++++ +..+...
T Consensus 143 ~l~dfg~~~~~~~~~~~--------~~~~-~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~ 213 (261)
T cd05072 143 KIADFGLARVIEDNEYT--------AREG-AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV 213 (261)
T ss_pred EECCCccceecCCCcee--------ccCC-CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH
Confidence 99999999765322110 0000 1112233 4444456778889999999999999998 5432210
Q ss_pred -hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 -KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 -~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+ ....++.++.++|.+|+..+|++||+.++-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 254 (261)
T cd05072 214 MSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYL 254 (261)
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 000 113467889999999999999999998764
No 103
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.94 E-value=2.4e-26 Score=223.32 Aligned_cols=219 Identities=14% Similarity=0.068 Sum_probs=160.2
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|++.+.||+|+||.||+|...+++.||||.+....... ....+|+.++.++.|+++
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~-----------------------~~~~~E~~~l~~l~h~~i- 63 (260)
T cd05067 8 LKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP-----------------------EAFLAEANLMKQLQHPRL- 63 (260)
T ss_pred ceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcH-----------------------HHHHHHHHHHHhcCCcCe-
Confidence 56789999999999999998888999999876432111 123469999999988653
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++ ....+++|||++|++|..++... .+ ..++.+++.+|.+||+.|++||||||.||++++++.++
T Consensus 64 -~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~ 142 (260)
T cd05067 64 -VRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCK 142 (260)
T ss_pred -eeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEE
Confidence 22232 35689999999999998865321 11 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc--h-h---
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL--D-K--- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l--~-~--- 313 (472)
|+|||.+......... .. ......+.| +|+......++.++|+||||+++++.++ +..+.. . .
T Consensus 143 l~dfg~~~~~~~~~~~--------~~-~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 213 (260)
T cd05067 143 IADFGLARLIEDNEYT--------AR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI 213 (260)
T ss_pred EccCcceeecCCCCcc--------cc-cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH
Confidence 9999998765421110 00 001112334 4444456778899999999999999998 543221 0 0
Q ss_pred -------h-hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -------E-LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -------~-~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .....++.++.++|.+|+..+|++||+.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l 253 (260)
T cd05067 214 QNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYL 253 (260)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 0 0124467889999999999999999998754
No 104
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.94 E-value=5e-26 Score=221.26 Aligned_cols=219 Identities=13% Similarity=0.088 Sum_probs=160.2
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||.|++|.||+|...+++.||||.++...... ..+.+|+.++.++.|+++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~-----------------------~~~~~e~~~l~~l~h~~i- 63 (261)
T cd05068 8 IQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP-----------------------KDFLAEAQIMKKLRHPKL- 63 (261)
T ss_pred eeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccH-----------------------HHHHHHHHHHHHCCCCCc-
Confidence 56779999999999999998777889999886432111 123469999999988654
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccCC--------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN--------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~--------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++. .+..+++|||++|++|.+++.... ...++.+++.++.+||+.||+||||||.||+++.++.+
T Consensus 64 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~ 142 (261)
T cd05068 64 -IQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNIC 142 (261)
T ss_pred -cceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCE
Confidence 33333 256899999999999988753211 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc--h-h--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL--D-K-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l--~-~-- 313 (472)
+|+|||++.....+.... ... ......| +|+......++.++|+||||++++++++ +..+.. . .
T Consensus 143 ~l~dfg~~~~~~~~~~~~--------~~~-~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~ 213 (261)
T cd05068 143 KVADFGLARVIKEDIYEA--------REG-AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV 213 (261)
T ss_pred EECCcceEEEccCCcccc--------cCC-CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 999999998664221100 000 0011233 4443355778999999999999999998 442210 0 0
Q ss_pred --hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 --EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 --~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ .....+..+.+++.+|+..+|++||+.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l 254 (261)
T cd05068 214 LQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETL 254 (261)
T ss_pred HHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 01 123467888999999999999999998764
No 105
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.94 E-value=2.5e-26 Score=224.26 Aligned_cols=219 Identities=13% Similarity=0.062 Sum_probs=159.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.+...||||+++...... ....+|+.++.++.|+++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~-----------------------~~~~~E~~~l~~l~~~~i- 63 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-----------------------EAFLQEAQVMKKLRHEKL- 63 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCH-----------------------HHHHHHHHHHHhCCCCCc-
Confidence 67789999999999999988666679999886322111 123579999999987653
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..++. ....++||||++|++|.+++... . ...++.+++.+|.+||+.||+||||||.||+++.++.++
T Consensus 64 -~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~ 142 (262)
T cd05071 64 -VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 142 (262)
T ss_pred -ceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEE
Confidence 33333 35679999999999998876421 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccc-cccccccccCCCCcchheeccCchhhhhhh-ccCCcc---hhh--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRF-HLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL---DKE-- 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y-~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l---~~~-- 314 (472)
|+|||.+.....+.... ... ..... +++|+......++.++|+||||++++++++ +..+.. ...
T Consensus 143 L~dfg~~~~~~~~~~~~--------~~~-~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~ 213 (262)
T cd05071 143 VADFGLARLIEDNEYTA--------RQG-AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 213 (262)
T ss_pred eccCCceeecccccccc--------ccC-CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH
Confidence 99999997654321100 000 11122 234554456778999999999999999998 432210 110
Q ss_pred --h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 --L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 --~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+ ....++..+.++|.+|+..+|++||+..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~ 253 (262)
T cd05071 214 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 253 (262)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 0 123467889999999999999999998764
No 106
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94 E-value=2.5e-26 Score=235.74 Aligned_cols=225 Identities=15% Similarity=0.123 Sum_probs=157.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++......... ...+.+|+.+++.+.|+++
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i 85 (364)
T cd07875 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH--------------------AKRAYRELVLMKCVNHKNI 85 (364)
T ss_pred eeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchh--------------------HHHHHHHHHHHHhcCCCCc
Confidence 67789999999999999998 46899999987532111100 1134578999999988764
Q ss_pred Ccce-eee-------cCCceeEEeecCCCChhhhhccCC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPN-AVD-------CNRHCVIMSLVQGYPLVQVNQLQN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~-~i~-------~~~~~LVMEyi~G~~L~~l~~~~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
.... .+. ....|+||||+++. |...+.... ...++.|++.+|.+||++||+||||||.|||++.++.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~ 164 (364)
T cd07875 86 IGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164 (364)
T ss_pred cccceeecccccccccCeEEEEEeCCCCC-HHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCc
Confidence 2111 111 13469999999874 444332221 2247899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
++|+|||++....... ....+.++.++.+|+...+..++.++|+||||+++++++++...+..
T Consensus 165 ~kL~DfG~a~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 234 (364)
T cd07875 165 LKILDFGLARTAGTSF----------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234 (364)
T ss_pred EEEEeCCCccccCCCC----------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999999997543211 11122333344456555667889999999999999999987532210
Q ss_pred -hhhh-----------------------------------------------ccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 -KELA-----------------------------------------------ASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 -~~~~-----------------------------------------------~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
..+. ....+..++++|.+||..+|.+|||+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 235 NKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred HHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 0000 0012346779999999999999999988
Q ss_pred CCCC
Q 012042 345 GSDD 348 (472)
Q Consensus 345 ~~~~ 348 (472)
-..-
T Consensus 315 ~L~h 318 (364)
T cd07875 315 ALQH 318 (364)
T ss_pred HhcC
Confidence 7664
No 107
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-26 Score=245.03 Aligned_cols=225 Identities=15% Similarity=0.144 Sum_probs=173.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.+..+||+|+||+|+++.. .+++.+|||+++.+.. +..+. .+.+..|-+++.-...
T Consensus 370 F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I-----------l~~d~--------Ve~~~~EkrI~~la~~--- 427 (694)
T KOG0694|consen 370 FRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI-----------LQRDE--------VESLMCEKRIFELANR--- 427 (694)
T ss_pred eEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccce-----------ecccc--------HHHHHHHHHHHHHhcc---
Confidence 45679999999999999998 5789999999974321 11111 1234567777776663
Q ss_pred Ccceeeec-------CCceeEEeecCCCChhhhhccC---ChH--HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC-------NRHCVIMSLVQGYPLVQVNQLQ---NPD--SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~~---~~~--~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+|-+... .+.|+||||+.|+++..+.+.. .+. -++..|+.+|.|||++|||+||||.+|||+|.+|.
T Consensus 428 -HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh 506 (694)
T KOG0694|consen 428 -HPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH 506 (694)
T ss_pred -CCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCc
Confidence 3655442 6789999999999977665422 222 36789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc---h----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL---D---- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l---~---- 312 (472)
+||+|||+++..-.. + ....+|++++-+++|++..+..|+...|-|+|||.+|+++++..++. +
T Consensus 507 ~kiADFGlcKe~m~~--------g-~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~F 577 (694)
T KOG0694|consen 507 VKIADFGLCKEGMGQ--------G-DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVF 577 (694)
T ss_pred EEecccccccccCCC--------C-CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 999999999854211 1 13457888888889999899999999999999999999999865442 1
Q ss_pred ------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 313 ------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 313 ------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
....+-..+.+...+|.+||..+|++|--+.|.++++
T Consensus 578 dsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~ 620 (694)
T KOG0694|consen 578 DSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAED 620 (694)
T ss_pred HHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchh
Confidence 1122456788888999999999999998776554443
No 108
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.94 E-value=5.2e-27 Score=244.26 Aligned_cols=222 Identities=12% Similarity=0.138 Sum_probs=172.5
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
-+.+.||+|+||.||+|+. .+.+.||||++......-+.++ .+.+|+++++.|+|++|
T Consensus 5 hv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~--------------------~l~~ev~i~r~lkHpni- 63 (808)
T KOG0597|consen 5 HVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELK--------------------NLRQEVRILRSLKHPNI- 63 (808)
T ss_pred hHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHH--------------------HHHHHHHHHHhcCCcch-
Confidence 3457899999999999988 4789999999854333222222 24589999999998432
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC--ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
...+++ ...|+|.||+.| +|..++... .|+ .+..+++.+|.|||+.+|+|||+||.|||+..+|.+|+
T Consensus 64 -v~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~Kl 141 (808)
T KOG0597|consen 64 -VEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKL 141 (808)
T ss_pred -hhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceee
Confidence 222222 668999999999 888886532 343 47889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---------
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--------- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--------- 313 (472)
||||+|+..+.. ...+.+.-+++++++|+.+.++.++.-+|.||+|+++|++.++.+++...
T Consensus 142 cdFg~Ar~m~~~---------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I 212 (808)
T KOG0597|consen 142 CDFGLARAMSTN---------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI 212 (808)
T ss_pred chhhhhhhcccC---------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 999999865421 11123334567888888778899999999999999999999998765321
Q ss_pred ----hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...++..+..+.+.|+-+|..+|..|-+.-....
T Consensus 213 ~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 213 LKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred hcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1235678999999999999999999977765544
No 109
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.94 E-value=2e-26 Score=237.24 Aligned_cols=225 Identities=13% Similarity=0.131 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+++.+.||+|+||.||+|.+ .+|+.||||.+........ ....+.+|+.+|..+.|+++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~ni 61 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLV--------------------SCKRVFRELKMLCFFKHDNV 61 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchH--------------------HHHHHHHHHHHHHhCCCCCc
Confidence 35678999999999999998 5799999998742211110 01235679999999988764
Q ss_pred Ccceeeec---------CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
..+++. ...|+||||+.+ +|...+... . ...++.||+.+|.|||+.||+||||||.|||++.
T Consensus 62 --v~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~ 138 (372)
T cd07853 62 --LSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS 138 (372)
T ss_pred --CCHhheecCCCccccceEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC
Confidence 222221 257999999975 555543211 1 2347889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||++......... .........++.+|+.+.+ ..++.++|+||+|+++++++++...+...
T Consensus 139 ~~~~kL~Dfg~a~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 139 NCVLKICDFGLARVEEPDESK--------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred CCCEEeccccceeecccCccc--------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 999999999999754322111 1111223334445554433 45789999999999999999875321000
Q ss_pred ----------------------------h---------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ----------------------------E---------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ----------------------------~---------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. ......+.++.++|.+||..+|++|||+++-...
T Consensus 211 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 211 IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 0112356778899999999999999999877653
No 110
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.94 E-value=5.2e-26 Score=225.26 Aligned_cols=223 Identities=15% Similarity=0.104 Sum_probs=159.3
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.+.+.||.|+||.||+|.+ .+|+.||||++........ .......+|+.+|.++.|+++.
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~~~~i~ 63 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR-------------------KGESMALNEKQILEKVNSQFVV 63 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhh-------------------hHHHHHHHHHHHHHHcCCcCce
Confidence 4568899999999999998 5799999998853211000 0011345799999999886542
Q ss_pred cce-eee-cCCceeEEeecCCCChhhhhcc----CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPN-AVD-CNRHCVIMSLVQGYPLVQVNQL----QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~-~i~-~~~~~LVMEyi~G~~L~~l~~~----~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
... .+. .+..+++|||++|++|...+.. ..+ ..++.|++.+|.|||+.||+||||||.||+++.++.++|
T Consensus 64 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl 143 (285)
T cd05632 64 NLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred eEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEE
Confidence 211 111 2568999999999998765421 111 247889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h-
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E- 314 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~- 314 (472)
+|||.+........ .....+.....+|+......++.++|+||||+++++++++..+.-.. .
T Consensus 144 ~Dfg~~~~~~~~~~----------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~ 213 (285)
T cd05632 144 SDLGLAVKIPEGES----------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV 213 (285)
T ss_pred ecCCcceecCCCCc----------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999865432110 00112222233555445677899999999999999999976432110 0
Q ss_pred ---------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 ---------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ---------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.....++.++.+++.+|+..+|++||+..|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 253 (285)
T cd05632 214 DRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEE 253 (285)
T ss_pred HHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCccc
Confidence 1124578888999999999999999998655
No 111
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.94 E-value=4.2e-26 Score=228.51 Aligned_cols=183 Identities=14% Similarity=0.127 Sum_probs=126.7
Q ss_pred ecceecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 95 VGRQLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
.+..||+|+||.||+|... +++.||||.+...... ..+.+|+.+|.++.|+++
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~------------------------~~~~~E~~~l~~l~h~ni 60 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS------------------------MSACREIALLRELKHPNV 60 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc------------------------HHHHHHHHHHHhcCCCCC
Confidence 3678999999999999863 5688999987532111 123579999999998764
Q ss_pred Ccce-eee---cCCceeEEeecCCCChhhhhcc-----------CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 172 PVPN-AVD---CNRHCVIMSLVQGYPLVQVNQL-----------QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 172 ~vP~-~i~---~~~~~LVMEyi~G~~L~~l~~~-----------~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
.... .+. ....+++|||+++ +|..++.. .. ...++.||+.+|.|||+.||+||||||.||
T Consensus 61 v~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Ni 139 (317)
T cd07868 61 ISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANI 139 (317)
T ss_pred cceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHE
Confidence 2211 111 1346899999876 55444321 11 134789999999999999999999999999
Q ss_pred EE----cCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhcc
Q 012042 233 MI----DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 233 Ll----~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~ 307 (472)
|+ +..+.++|+|||+|.....+... ........++..+.+|+.+.+ ..++.++|+||+|+++++++++.
T Consensus 140 l~~~~~~~~~~~kl~DfG~a~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 213 (317)
T cd07868 140 LVMGEGPERGRVKIADMGFARLFNSPLKP------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 213 (317)
T ss_pred EEecCCCCcCcEEEeecCceeccCCCCcc------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCC
Confidence 99 35578999999999765432111 011112233333445554444 56899999999999999999875
Q ss_pred C
Q 012042 308 A 308 (472)
Q Consensus 308 ~ 308 (472)
.
T Consensus 214 ~ 214 (317)
T cd07868 214 P 214 (317)
T ss_pred C
Confidence 3
No 112
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=3.6e-26 Score=222.71 Aligned_cols=220 Identities=13% Similarity=0.164 Sum_probs=158.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+.+.....- ...+.+|+.++.++.|+++
T Consensus 11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~----------------------~~~~~~e~~~l~~~~h~~i 68 (267)
T cd06646 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD----------------------FSLIQQEIFMVKECKHCNI 68 (267)
T ss_pred cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccch----------------------HHHHHHHHHHHHhcCCCCe
Confidence 56789999999999999998 578999999986432110 0124578999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+..++ .+..++||||+++++|..++... .+ ..++.|++.+|.+||+.||+||||+|.||+++.++.++
T Consensus 69 --i~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~ 146 (267)
T cd06646 69 --VAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVK 146 (267)
T ss_pred --eeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEE
Confidence 33332 26689999999999998865322 11 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcch-----h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLD-----K 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~ 313 (472)
|+|||.+.....+... ...+.+..+..+|+.. ....++.++|+||||+++++++++..+..+ .
T Consensus 147 l~dfg~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~ 217 (267)
T cd06646 147 LADFGVAAKITATIAK---------RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA 217 (267)
T ss_pred ECcCccceeecccccc---------cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh
Confidence 9999999765322110 0111222222344432 134577899999999999999886532110 0
Q ss_pred -------h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -------E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -------~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .....++..+.++|.+|+..+|++||+.++-
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i 262 (267)
T cd06646 218 LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERL 262 (267)
T ss_pred heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 0 0123567889999999999999999998764
No 113
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.8e-27 Score=232.43 Aligned_cols=224 Identities=13% Similarity=0.162 Sum_probs=168.7
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc-
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV- 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v- 173 (472)
.+.||.|++|.|+.|.+ .+|+.||||.+. ..|... ..-.++.||+++|+++.|.+|..
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~---~~F~~~-----------------~~akRtlRElklLr~~~HeNIi~l 86 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKIL---NPFENQ-----------------IDAKRTLRELKLLRHLRHENIIGL 86 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhh---hhhhch-----------------HHHHHHHHHHHHHHHhcCCCcceE
Confidence 58899999999999999 689999999653 123211 11235679999999999877421
Q ss_pred -----c-eeeecCCceeEEeecCCCChhhhhccCC--h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 174 -----P-NAVDCNRHCVIMSLVQGYPLVQVNQLQN--P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 174 -----P-~~i~~~~~~LVMEyi~G~~L~~l~~~~~--~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
| ..-.++..|+|+|++ +.+|.+++..+. . .-++.||+.+|.|+|+.+|+||||||.|+|++.+..+|
T Consensus 87 ~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lK 165 (359)
T KOG0660|consen 87 LDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLK 165 (359)
T ss_pred EeecccccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEE
Confidence 2 111247799999999 678888765443 1 23789999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCcc-----hh--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGFL-----DK-- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~l-----~~-- 313 (472)
|+|||+|+..+.. . .-.-++.|+.++++-+|+.. ....||...||||.|+.+-+++++++-+. ++
T Consensus 166 I~DFGLAR~~~~~-~------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~ 238 (359)
T KOG0660|consen 166 ICDFGLARYLDKF-F------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQ 238 (359)
T ss_pred eccccceeecccc-C------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHH
Confidence 9999999876421 1 11235677877776677764 56899999999999999988888653111 00
Q ss_pred ---------------hh----------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ---------------EL----------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ---------------~~----------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ .-++.+..--++|++||..+|.+|+|++|-+.
T Consensus 239 lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 239 LILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 00234555568999999999999999998877
No 114
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.94 E-value=4.4e-26 Score=220.18 Aligned_cols=218 Identities=14% Similarity=0.098 Sum_probs=155.8
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
+.||+|+||.||+|.+ .+|+.||+|.++.....- ....+.+|+.+|.++.|+++ +.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h~~i--~~ 57 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPD---------------------LKAKFLQEARILKQYSHPNI--VR 57 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHH---------------------HHHHHHHHHHHHHhCCCCCc--ce
Confidence 3689999999999998 479999999875321110 11235679999999988764 34
Q ss_pred eeec----CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 176 AVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 176 ~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
+++. ...++||||++|++|..++... .. ..++.+++.+|.|||+.||+||||||.|||++.++.++|+|
T Consensus 58 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~d 137 (252)
T cd05084 58 LIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISD 137 (252)
T ss_pred EEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECc
Confidence 4432 5679999999999998876321 11 24788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCc--ch-h----h-
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGF--LD-K----E- 314 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~--l~-~----~- 314 (472)
||.+........ ..........+.| +|+....+.++.++|+||||+++++.++ +..+. .. . .
T Consensus 138 fg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~ 209 (252)
T cd05084 138 FGMSREEEDGVY--------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI 209 (252)
T ss_pred cccCcccccccc--------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH
Confidence 999865421100 0000011112223 4444456778999999999999999887 43221 10 0 0
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.....++..+.+++.+|+..+|++|||.++-
T Consensus 210 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 246 (252)
T cd05084 210 EQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTV 246 (252)
T ss_pred HcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0123467888999999999999999998764
No 115
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.94 E-value=4.1e-26 Score=235.92 Aligned_cols=227 Identities=15% Similarity=0.112 Sum_probs=159.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||+|++.... .... .....+..|+.++..+.|+++
T Consensus 45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~--~~~~-----------------~~~~~~~~e~~i~~~~~hp~i 105 (370)
T cd05621 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFE--MIKR-----------------SDSAFFWEERDIMAFANSPWV 105 (370)
T ss_pred CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--hhhh-----------------hhHHHHHHHHHHHHhCCCCCE
Confidence 66778999999999999998 468999999885211 0000 001134578899999887653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.++. ....|+||||++|++|..++... .+ ..++.+|+.+|.+||++||+||||||.|||++.++.++|
T Consensus 106 --v~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL 183 (370)
T cd05621 106 --VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKL 183 (370)
T ss_pred --eeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEE
Confidence 33333 25689999999999998876432 12 237789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhcccccccccccccc----CCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD----GDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~----~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
+|||+|.....+.. .......++..+++|+.+.. ..++.++|+||+|+++|+++++..++...
T Consensus 184 ~DFG~a~~~~~~~~--------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~ 255 (370)
T cd05621 184 ADFGTCMKMDETGM--------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT 255 (370)
T ss_pred EecccceecccCCc--------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH
Confidence 99999986532211 01112234434445554422 34788999999999999999986543110
Q ss_pred --hh---------h-ccCCCHHHHHHHHHHHhcCcc--cCCCCCCCCCC
Q 012042 314 --EL---------A-ASGFTRKDQDVIQKFIGGSIE--ESGSDDEGSDD 348 (472)
Q Consensus 314 --~~---------~-~~~~s~~~~~~l~k~l~~~p~--~R~s~~e~~~~ 348 (472)
.+ . ...++...+.+|.+|+...+. .|++.++...-
T Consensus 256 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 256 YSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 01 0 123577888999999985554 37887776553
No 116
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94 E-value=7.1e-26 Score=219.11 Aligned_cols=222 Identities=17% Similarity=0.145 Sum_probs=163.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|+||.||++.+ .+++.||+|.++.... ... .....+|+.++..+.|+++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~--------------------~~~~~~e~~~l~~l~h~~i 60 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSA--------------------VEDSRKEAVLLAKMKHPNI 60 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHH--------------------HHHHHHHHHHHHhCCCCCc
Confidence 46779999999999999998 4689999998864321 110 1134568899999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.+++ .+..|++|||++|++|...+... .+ ..++.+|+.+|.+||++||+|+||||.||++++++.
T Consensus 61 --~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~ 138 (255)
T cd08219 61 --VAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK 138 (255)
T ss_pred --ceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCc
Confidence 33333 26789999999999987764321 11 246889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
++|+|||.+.....+... ...+.+.....+|+.+....++.++|+||||+++++++++..+....
T Consensus 139 ~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~ 209 (255)
T cd08219 139 VKLGDFGSARLLTSPGAY---------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI 209 (255)
T ss_pred EEEcccCcceeecccccc---------cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHH
Confidence 999999998765432210 01122233344566555677899999999999999999875432110
Q ss_pred -hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ ....++..+.++|.+|++.+|++||++.+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 250 (255)
T cd08219 210 LKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTIL 250 (255)
T ss_pred HHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHh
Confidence 01 1234677889999999999999999987653
No 117
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.94 E-value=3.2e-26 Score=232.57 Aligned_cols=222 Identities=14% Similarity=0.143 Sum_probs=158.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .+++.||||.+........ ....+.+|+.+|.++.|+++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 76 (343)
T cd07878 17 YQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLI--------------------HARRTYRELRLLKHMKHENV 76 (343)
T ss_pred hhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhH--------------------HHHHHHHHHHHHHhcCCCch
Confidence 56678999999999999998 5788999998753211111 01134579999999988653
Q ss_pred Ccceeee----------cCCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVD----------CNRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~----------~~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
...++ ....|++|+++ |++|..++... . ...++.||+.+|.|||++||+||||||.|||++.
T Consensus 77 --v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~ 153 (343)
T cd07878 77 --IGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE 153 (343)
T ss_pred --hhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC
Confidence 12221 13468999987 67777665322 1 2348899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||++...... ...+.+...+.+|+.+.. ..++.++||||||+++++++++.......
T Consensus 154 ~~~~kl~Dfg~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 221 (343)
T cd07878 154 DCELRILDFGLARQADDE------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY 221 (343)
T ss_pred CCCEEEcCCccceecCCC------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH
Confidence 999999999999754321 112333444455655433 56889999999999999999875322100
Q ss_pred -----h---------------h----------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -----E---------------L----------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -----~---------------~----------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
. + ...+.+..+.++|.+|+..+|++|||+.+.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 222 IDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred HHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0 0 0013455567899999999999999998887643
No 118
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.94 E-value=4.4e-26 Score=225.73 Aligned_cols=220 Identities=14% Similarity=0.077 Sum_probs=158.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||++.+ .+++.||||++........ .....+.+|+.+|.++.|+++
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~h~~i 62 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR-------------------KGEAMALNEKQILEKVNSRFV 62 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh-------------------hhHHHHHHHHHHHHhcCCCCE
Confidence 45678999999999999998 5799999998853211000 001234579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc----CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL----QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~----~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+..+. .+..++||||++|++|...+.. ..+ ..++.|++.+|.|||+.||+||||||.||++++++.
T Consensus 63 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~ 140 (285)
T cd05605 63 --VSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGH 140 (285)
T ss_pred --eeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCC
Confidence 22222 2568999999999999765421 112 236789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
++|+|||++........ .....+....++|+......++.++|+||+|+++++.+++..+...
T Consensus 141 ~~l~Dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~ 210 (285)
T cd05605 141 IRISDLGLAVEIPEGET----------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR 210 (285)
T ss_pred EEEeeCCCceecCCCCc----------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH
Confidence 99999999875432111 0111222223355544567789999999999999999987543211
Q ss_pred ----hhh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 313 ----KEL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 313 ----~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
..+ ....++..+.++|.+|+..+|++||+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05605 211 EEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCR 251 (285)
T ss_pred HHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCC
Confidence 001 1235788899999999999999999665
No 119
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94 E-value=4e-26 Score=256.38 Aligned_cols=232 Identities=13% Similarity=0.104 Sum_probs=165.0
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++........ .+..+.+|+.++.++.|+++
T Consensus 4 YeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~-------------------~~~rflrEi~ILs~L~HPNI 64 (932)
T PRK13184 4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPL-------------------LKKRFLREAKIAADLIHPGI 64 (932)
T ss_pred eEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHH-------------------HHHHHHHHHHHHHhCCCcCc
Confidence 567899999999999999984 6999999988632111110 11235679999999998764
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--------------C---hHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--------------N---PDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--------------~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
+.+++. +..++||||++|++|..++... . ...++.+|+.+|.|||+.||+||||||.
T Consensus 65 --Vkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPe 142 (932)
T PRK13184 65 --VPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPD 142 (932)
T ss_pred --CeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchh
Confidence 333332 5689999999999998865310 0 1236789999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccch-hhh--------ccccchhhhhccccccccccccccCCCCcchheeccCchhh
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQ-MYF--------DRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~-~~l--------~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
|||++.++.++|+|||++......... ... .........+.++..+++|+...+..++.++|+||||++++
T Consensus 143 NILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILy 222 (932)
T PRK13184 143 NILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILY 222 (932)
T ss_pred eEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHH
Confidence 999999999999999999866321110 000 00011111223444445566556778899999999999999
Q ss_pred hhhhccCCcchh--------h-h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 302 ASISKTAGFLDK--------E-L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 302 ~~~t~~~~~l~~--------~-~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+++++..+.... . + ....++..+..++.+|+..+|++||++.++
T Consensus 223 ELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~ee 282 (932)
T PRK13184 223 QMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQE 282 (932)
T ss_pred HHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 999976432110 0 0 112567789999999999999999886554
No 120
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94 E-value=4e-26 Score=223.59 Aligned_cols=222 Identities=12% Similarity=0.069 Sum_probs=159.3
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|.+.+.||+|+||.||+|... +++.||||+++.....- ....+.+|+.+|.++
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~l~~l 65 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASND---------------------ARKDFEREAELLTNF 65 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHH---------------------HHHHHHHHHHHHHhc
Confidence 455688999999999999863 24789999886332110 012456799999999
Q ss_pred hhCCCCcceeee----cCCceeEEeecCCCChhhhhccCC--------------------hHHHHHHHHHHHHHHHHCCc
Q 012042 167 EDHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN--------------------PDSVFETIIGLVVRLAEHGL 222 (472)
Q Consensus 167 ~~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~--------------------~~~i~~qIl~aL~~LH~~GI 222 (472)
.|+++ +.+++ ....++||||++|++|..++.... ...++.+++.++.+||+.|+
T Consensus 66 ~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 143 (280)
T cd05049 66 QHENI--VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF 143 (280)
T ss_pred CCCCc--hheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe
Confidence 88653 33333 267899999999999988753211 12378899999999999999
Q ss_pred eeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhh
Q 012042 223 IHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 223 IHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
+||||||.|||++.++.++|+|||.+........ .. ... .... ... .+|+.+....++.++|+||||++++
T Consensus 144 ~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~---~~--~~~--~~~~-~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 144 VHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY---YR--VGG--HTML-PIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred eccccccceEEEcCCCeEEECCcccceecccCcc---ee--cCC--CCcc-cceecChhhhccCCcchhhhHHHHHHHHH
Confidence 9999999999999999999999999875421110 00 000 0011 122 3555556678999999999999999
Q ss_pred hhhh-ccCCcch-------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 302 ASIS-KTAGFLD-------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 302 ~~~t-~~~~~l~-------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+.++ +..+... . ......++..+.++|.+|+..+|++||+..|-
T Consensus 216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei 274 (280)
T cd05049 216 EIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDI 274 (280)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 9987 5433210 0 01134577889999999999999999998764
No 121
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.94 E-value=2.2e-26 Score=244.25 Aligned_cols=179 Identities=20% Similarity=0.315 Sum_probs=143.8
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH- 169 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~- 169 (472)
-|.|.+.||+|.||+|.+|.+ .+++.||||+++....-++ .+.-|+.+|..|+.+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~-----------------------Q~~~Ei~iL~~ln~~d 243 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLR-----------------------QAQIEIRILELLNKHD 243 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHH-----------------------HHHHHHHHHHHHhccC
Confidence 478899999999999999999 5799999999975432222 345699999999832
Q ss_pred ---CCCcceeeec----CCceeEEeecCCCChhhhhccC--------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 170 ---GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 170 ---gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
..++.+.+++ +.+|||+|.+. .+|++++... ....++.||+.+|.+||+.||||+||||+||||
T Consensus 244 ~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL 322 (586)
T KOG0667|consen 244 PDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILL 322 (586)
T ss_pred CCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheee
Confidence 1334445553 77899999984 6777775422 124589999999999999999999999999999
Q ss_pred cCC--CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc
Q 012042 235 DDD--EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 235 ~~~--g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
.+- ..|||||||+|+... ..+.+|...+|+-+|++..+..|+.+.|+||||+++-|+.++
T Consensus 323 ~~~~r~~vKVIDFGSSc~~~------------q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG 384 (586)
T KOG0667|consen 323 KDPKRSRIKVIDFGSSCFES------------QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG 384 (586)
T ss_pred ccCCcCceeEEecccccccC------------CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcC
Confidence 743 359999999998543 234578888998899998999999999999999999888775
No 122
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=6.2e-26 Score=223.43 Aligned_cols=221 Identities=12% Similarity=0.060 Sum_probs=157.5
Q ss_pred eeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+++.+.||+|+||.||+|.. .++..||||..+.....- ....+.+|+.++.++.
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~---------------------~~~~~~~E~~~l~~l~ 65 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQ---------------------QWGEFQQEASLMAELH 65 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHH---------------------HHHHHHHHHHHHhhCC
Confidence 45678999999999999985 246789999875321110 0113557999999998
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------------C----hHHHHHHHHHHHHHHHHC
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------------N----PDSVFETIIGLVVRLAEH 220 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------------~----~~~i~~qIl~aL~~LH~~ 220 (472)
|+++ +.+++. ...|+||||+++++|.+++... . ...++.+++.+|.|||++
T Consensus 66 h~ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 143 (283)
T cd05090 66 HPNI--VCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH 143 (283)
T ss_pred CCCe--eeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 8653 344432 5679999999999998865211 0 123788999999999999
Q ss_pred CceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCch
Q 012042 221 GLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRL 299 (472)
Q Consensus 221 GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~ 299 (472)
||+||||||.|||++.++.++|+|||++.......... ....+...+.|.++++ ....++.++|+||||++
T Consensus 144 ~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 144 FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYR--------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred CeehhccccceEEEcCCCcEEeccccccccccCCccee--------cccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 99999999999999999999999999997653221100 0001111233433433 45778999999999999
Q ss_pred hhhhhh-ccCCcc---hhh-----------hhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 300 SFASIS-KTAGFL---DKE-----------LAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 300 ~f~~~t-~~~~~l---~~~-----------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
++++++ +..+.. ... .....++..+.++|.+|+..+|++||+..+
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 275 (283)
T cd05090 216 LWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKD 275 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHH
Confidence 999987 543211 000 012457888999999999999999999765
No 123
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=2.7e-26 Score=235.62 Aligned_cols=173 Identities=15% Similarity=0.132 Sum_probs=128.8
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||.|+||.||+|.+. +++.||+|+..... ...|+.+|.++.|++
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~----------------------------~~~E~~~l~~l~h~~ 118 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT----------------------------TLIEAMLLQNVNHPS 118 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc----------------------------cHHHHHHHHhCCCCC
Confidence 3778899999999999999984 68899999753221 125889999999876
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhc-cC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQ-LQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~-~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +++++ ....++||||+.| +|..++. .. . ...++.||+.+|.|||.+|||||||||.|||++.++.
T Consensus 119 i--v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~ 195 (357)
T PHA03209 119 V--IRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQ 195 (357)
T ss_pred C--cChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC
Confidence 4 33333 2567899999976 4444432 11 1 1347889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
++|+|||.+...... .....+.+..++.+|+.+....++.++|+||||+++|++++
T Consensus 196 ~kl~DfG~a~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~ 251 (357)
T PHA03209 196 VCIGDLGAAQFPVVA----------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251 (357)
T ss_pred EEEecCccccccccC----------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHH
Confidence 999999998643211 01111223334446666667789999999999999999886
No 124
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=4.2e-26 Score=222.47 Aligned_cols=223 Identities=14% Similarity=0.112 Sum_probs=156.3
Q ss_pred eecceecccCceeEEEEEeC-CCC--EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGT--VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~--~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.+++.||+|+||.||+|... ++. .||||.++....+... ...+.+|+.+|.++.|++
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~ 61 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSE--------------------MEDFLSEAVCMKEFDHPN 61 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHH--------------------HHHHHHHHHHHHhCCCCC
Confidence 46789999999999999884 343 6999987643211111 113457899999998876
Q ss_pred CCcceeeec----------CCceeEEeecCCCChhhhhcc------C--Ch----HHHHHHHHHHHHHHHHCCceeccCC
Q 012042 171 FPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQL------Q--NP----DSVFETIIGLVVRLAEHGLIHCDFN 228 (472)
Q Consensus 171 i~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~------~--~~----~~i~~qIl~aL~~LH~~GIIHrDLK 228 (472)
+ ++.++. ...+++|||+++++|...+.. . .+ ..++.+++.+|.|||++||+|||||
T Consensus 62 i--v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 139 (272)
T cd05075 62 V--MRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLA 139 (272)
T ss_pred c--ceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 4 443331 246899999999998775411 0 11 2478899999999999999999999
Q ss_pred CCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccc-cccccccccCCCCcchheeccCchhhhhhh-c
Q 012042 229 EFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRF-HLNFQETTDGDDGSDIDTDEGSRLSFASIS-K 306 (472)
Q Consensus 229 P~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y-~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~ 306 (472)
|.|||++.++.++|+|||.+......... .......... ..+|+......++.++|+||||++++++++ +
T Consensus 140 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g 211 (272)
T cd05075 140 ARNCMLNENMNVCVADFGLSKKIYNGDYY--------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRG 211 (272)
T ss_pred hhheEEcCCCCEEECCCCcccccCcccce--------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999998765322110 0000111112 234444456778999999999999999987 3
Q ss_pred cCCcc---hhh-----------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 307 TAGFL---DKE-----------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 307 ~~~~l---~~~-----------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+.. ... .....++..+.++|.+|+..+|++|||.++..
T Consensus 212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~ 265 (272)
T cd05075 212 QTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLR 265 (272)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 32211 000 11345778899999999999999999987653
No 125
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94 E-value=5e-26 Score=223.91 Aligned_cols=224 Identities=15% Similarity=0.084 Sum_probs=159.5
Q ss_pred eeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+++.+.||+|+||.||+|.. .++..||||.+....... ...+.+|+.+|.++.
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~----------------------~~~~~~e~~~l~~l~ 63 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEH----------------------LRDFEREIEILKSLQ 63 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHH----------------------HHHHHHHHHHHHhCC
Confidence 45678999999999999973 358899999875332110 013457999999998
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
|+++ +..++. ...++||||++|++|..++... .+ ..++.+++.+|.+||++||+||||||.|||+
T Consensus 64 h~~i--v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili 141 (284)
T cd05081 64 HDNI--VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV 141 (284)
T ss_pred CCCe--eEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE
Confidence 8764 333331 3578999999999999876321 11 2478899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc--c-
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF--L- 311 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~--l- 311 (472)
+.++.++|+|||.+......... +..+ .......+.++|+......++.++|+||||+++++++++.... .
T Consensus 142 ~~~~~~~l~dfg~~~~~~~~~~~-~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~ 215 (284)
T cd05081 142 ESENRVKIGDFGLTKVLPQDKEY-YKVR-----EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP 215 (284)
T ss_pred CCCCeEEECCCcccccccCCCcc-eeec-----CCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc
Confidence 99999999999999865322110 0000 0011122344666555677899999999999999998742110 0
Q ss_pred -h---------------hhh-----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 -D---------------KEL-----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 -~---------------~~~-----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. ..+ ....++.++.++|.+|+..+|++|||+.+-.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~ 277 (284)
T cd05081 216 AEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELA 277 (284)
T ss_pred hhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 0 000 0134667899999999999999999987653
No 126
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94 E-value=7.3e-26 Score=219.47 Aligned_cols=220 Identities=13% Similarity=0.016 Sum_probs=157.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||++...++..+|+|.++..... ...+.+|+.+|.++.|+++
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~-----------------------~~~~~~e~~~l~~l~h~~i- 61 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS-----------------------EEDFIEEAKVMMKLSHPKL- 61 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc-----------------------HHHHHHHHHHHHHCCCCCc-
Confidence 4556889999999999998877788999987533211 1124569999999988664
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..+++. ...++||||++|++|.+.+... .+ ..++.+++.+|.|||+.||+||||||.||+++.++.++
T Consensus 62 -~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05114 62 -VQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVK 140 (256)
T ss_pred -eeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEE
Confidence 233332 5679999999999998875321 11 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcc-----h--h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL-----D--K 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l-----~--~ 313 (472)
|+|||.+.....+... +...........+|+......++.++|+||||++++++++ +..+.. + .
T Consensus 141 l~d~g~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~ 212 (256)
T cd05114 141 VSDFGMTRYVLDDEYT--------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVE 212 (256)
T ss_pred ECCCCCccccCCCcee--------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999998754322110 0001111112234444445678899999999999999988 443211 0 0
Q ss_pred hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ .+...+..+..+|.+|+..+|++|||.++.
T Consensus 213 ~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l 251 (256)
T cd05114 213 MISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAEL 251 (256)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 01 123356778899999999999999998764
No 127
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.94 E-value=5.9e-26 Score=223.60 Aligned_cols=225 Identities=14% Similarity=0.037 Sum_probs=159.8
Q ss_pred eeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+.+.+.||+|+||.||++.. .++..||||+++...... ....+.+|+.+|.++.
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~ 64 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQ---------------------NTSGWKKEINILKTLY 64 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChH---------------------HHHHHHHHHHHHHhCC
Confidence 35678999999999988652 357899999886432111 0113457999999998
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
|+++ +..++. ...+++|||+++++|..++... . ...++.+++.+|.+||+.||+||||||.|||++.
T Consensus 65 h~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~ 142 (283)
T cd05080 65 HENI--VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN 142 (283)
T ss_pred CCCE--eeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC
Confidence 8753 344432 2468999999999998875422 1 2247889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--h--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--D-- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~-- 312 (472)
++.++|+|||.+.............. ......+.++|+.+....++.++|+||||+++++++++..+.. .
T Consensus 143 ~~~~~l~dfg~~~~~~~~~~~~~~~~------~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~ 216 (283)
T cd05080 143 DRLVKIGDFGLAKAVPEGHEYYRVRE------DGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK 216 (283)
T ss_pred CCcEEEeecccccccCCcchhhccCC------CCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch
Confidence 99999999999875532211100000 0112223456665556778999999999999999998642210 0
Q ss_pred --------------hhh-----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 --------------KEL-----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 --------------~~~-----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+ ....++.++.+++.+|+..+|++|||.++-.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~ 275 (283)
T cd05080 217 FEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLI 275 (283)
T ss_pred hhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHH
Confidence 000 0233567899999999999999999987643
No 128
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94 E-value=6.4e-26 Score=218.49 Aligned_cols=217 Identities=14% Similarity=0.113 Sum_probs=156.3
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
++||+|+||.||+|...++..||+|+++.....- ....+.+|+.++.++.|+++ +.+
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h~~i--~~~ 57 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE---------------------LKIKFLSEARILKQYDHPNI--VKL 57 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHH---------------------HHHHHHHHHHHHHhCCCCCc--CeE
Confidence 3689999999999988788999999876332110 11235579999999988764 333
Q ss_pred eec----CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 177 VDC----NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 177 i~~----~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
++. +..++||||++|++|...+... .. ..++.+++.+|.+||++|++||||+|.||+++.++.++|+||
T Consensus 58 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~ 137 (250)
T cd05085 58 IGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDF 137 (250)
T ss_pred EEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCC
Confidence 332 6689999999999998865321 11 247789999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch---h-------
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K------- 313 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~------- 313 (472)
|.+........ .........+.| +|+......++.++|+||||+.+++.++ +..+... .
T Consensus 138 g~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~ 208 (250)
T cd05085 138 GMSRQEDDGIY---------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE 208 (250)
T ss_pred ccceecccccc---------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 99864322110 000111112333 4444456778999999999999999887 4322100 0
Q ss_pred ---h-hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ---E-LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ---~-~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .....++..+.+++.+|+..+|++||+..+-
T Consensus 209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l 244 (250)
T cd05085 209 KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSEL 244 (250)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 0 1123467889999999999999999998764
No 129
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.94 E-value=3.8e-26 Score=236.38 Aligned_cols=222 Identities=14% Similarity=0.084 Sum_probs=157.7
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|++++.||+|+||.||+|.+. ++..||||+++...... ....+.+|+.+|..+
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~il~~l 98 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD---------------------EREALMSELKILSHL 98 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHH---------------------HHHHHHHHHHHHHhh
Confidence 567899999999999999852 24579999886432110 012356799999999
Q ss_pred -hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC----------------------------------------
Q 012042 167 -EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---------------------------------------- 201 (472)
Q Consensus 167 -~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---------------------------------------- 201 (472)
.|+++ +..++. +..++||||++|++|.+++...
T Consensus 99 ~~h~nI--v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (374)
T cd05106 99 GQHKNI--VNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQ 176 (374)
T ss_pred ccCCce--eeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccc
Confidence 56543 444432 5689999999999988764210
Q ss_pred ---------------------------------C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 202 ---------------------------------N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 202 ---------------------------------~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
. ...++.+|+.+|.|||++||+||||||.|||+++++.++|+||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~Df 256 (374)
T cd05106 177 GSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDF 256 (374)
T ss_pred ccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeec
Confidence 0 1247789999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhh-ccCCcch----h---hh-
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD----K---EL- 315 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~----~---~~- 315 (472)
|++.....+.... .......... ++|+......++.++|+||||++++++++ +..+... . ..
T Consensus 257 Gla~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~ 328 (374)
T cd05106 257 GLARDIMNDSNYV--------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV 328 (374)
T ss_pred eeeeeccCCccee--------eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH
Confidence 9997654322110 0000111222 34554456778999999999999999987 5432210 0 01
Q ss_pred -------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 316 -------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 316 -------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.....+.++.++|.+|+..+|++|||.++-
T Consensus 329 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l 365 (374)
T cd05106 329 KRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQI 365 (374)
T ss_pred HcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 112357889999999999999999998764
No 130
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=2.9e-26 Score=249.76 Aligned_cols=224 Identities=18% Similarity=0.206 Sum_probs=163.6
Q ss_pred eeeecceecccCceeEEEEEeCC-CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARED-GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~-g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-..|.+.|.+||||.||+|.+.. |..||+|.+-..... .-..+.+|+.+|+.|..+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~----------------------~L~~v~~EI~~MK~L~gh- 94 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEE----------------------ALNAVKREIDIMKLLSGH- 94 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHH----------------------HHHHHHHHHHHHHHhcCC-
Confidence 35777999999999999999954 499999976432110 112456899999999854
Q ss_pred CCcceeeec--------------CCceeEEeecCCCChhhhhcc----C----ChHHHHHHHHHHHHHHHHCC--ceecc
Q 012042 171 FPVPNAVDC--------------NRHCVIMSLVQGYPLVQVNQL----Q----NPDSVFETIIGLVVRLAEHG--LIHCD 226 (472)
Q Consensus 171 i~vP~~i~~--------------~~~~LVMEyi~G~~L~~l~~~----~----~~~~i~~qIl~aL~~LH~~G--IIHrD 226 (472)
|++|.+ ....|+||||.|+.|-+++.. . ....|+.++++|+.+||.+. |||||
T Consensus 95 ---~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRD 171 (738)
T KOG1989|consen 95 ---KNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRD 171 (738)
T ss_pred ---CceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhh
Confidence 555543 235789999999888777531 1 23469999999999999887 99999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCc-c-cch--hhhccccchhhhhcccccccccccc---ccCCCCcchheeccCch
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSH-Q-NAQ--MYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRL 299 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~-p-~a~--~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~ 299 (472)
||-+||||..+|..||||||.|....+ | ++. .++. .+|.+|-...|. +|+++ .+..++.|+|||+|||.
T Consensus 172 LKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve---~eI~k~TTp~YR-sPEMIDlysg~pI~eKsDIWALGcl 247 (738)
T KOG1989|consen 172 LKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVE---EEIEKYTTPQYR-SPEMIDLYSGLPIGEKSDIWALGCL 247 (738)
T ss_pred hhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHH---HHHHhhCCcccc-ChHHHhhhcCCCCcchhHHHHHHHH
Confidence 999999999999999999999976543 2 222 2333 234444444343 45543 67889999999999999
Q ss_pred hhhhhhccCCcch----------hhhhc-cCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 300 SFASISKTAGFLD----------KELAA-SGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 300 ~f~~~t~~~~~l~----------~~~~~-~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+|.+.=...++-+ ..++. +.++..++.+|..||+.+|++||+.-.-
T Consensus 248 LYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv 304 (738)
T KOG1989|consen 248 LYKLCYFTTPFEESGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQV 304 (738)
T ss_pred HHHHHHhCCCcCcCcceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHH
Confidence 8766543222111 11222 5789999999999999999999886543
No 131
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.94 E-value=4.8e-26 Score=221.47 Aligned_cols=222 Identities=14% Similarity=0.184 Sum_probs=160.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcc-hhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRT-SFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~-sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||.|+||.||+|.. .+++.||||.++.... ... ....+.+|+.+|+++.|++
T Consensus 4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~ 63 (267)
T cd08228 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAK--------------------ARQDCVKEIDLLKQLNHPN 63 (267)
T ss_pred eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHH--------------------HHHHHHHHHHHHHhCCCcc
Confidence 56778999999999999998 4789999998753211 110 1123457999999998876
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhcc-----C-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-----Q-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-----~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ +.+++ .+..+++|||++|++|..++.. . .+ ..++.+|+.+|.|||++||+|+||||.||+++.
T Consensus 64 i--~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~ 141 (267)
T cd08228 64 V--IKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA 141 (267)
T ss_pred e--eeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC
Confidence 4 33333 2678999999999999876521 1 12 247889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
++.++|+|||.+........ ......+.....+|+.+....++.++|+||||+++++++++..+...
T Consensus 142 ~~~~~l~d~g~~~~~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~ 212 (267)
T cd08228 142 TGVVKLGDLGLGRFFSSKTT---------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 212 (267)
T ss_pred CCCEEECccccceeccchhH---------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc
Confidence 99999999999875432111 11111222233455554566788999999999999999987543210
Q ss_pred -----hh--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 -----KE--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 -----~~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. +....++..+.++|.+|+..+|++||+..+-
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~v 258 (267)
T cd08228 213 LFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYV 258 (267)
T ss_pred HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHH
Confidence 00 1123466788999999999999999998764
No 132
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.93 E-value=8.7e-26 Score=219.69 Aligned_cols=235 Identities=15% Similarity=0.153 Sum_probs=165.0
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.++..||.|++|.||+|.+ .+++.||||.+............. ......+.+|+.++.++.|+++
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~i- 68 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRK-------------RSMLDALAREIALLKELQHENI- 68 (267)
T ss_pred cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHH-------------HHHHHHHHHHHHHHHhcCCCCe-
Confidence 4578999999999999998 468999999886443222110000 0111346689999999988763
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.+++ .+..+++|||++|++|..++... . ...++.+++.+|.+||+.|++||||+|.||++++++.++|
T Consensus 69 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l 147 (267)
T cd06628 69 -VQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKI 147 (267)
T ss_pred -eeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEe
Confidence 44443 26789999999999998876432 1 1247889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----h-----
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----K----- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~----- 313 (472)
+|||.+............. .....+.+.....+|+......++.++|+||||+++++++++..+.-. .
T Consensus 148 ~dfg~~~~~~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 224 (267)
T cd06628 148 SDFGISKKLEANSLSTKTN---GARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKI 224 (267)
T ss_pred cccCCCcccccccccCCcc---ccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHH
Confidence 9999998664321111000 011111222222345544566788899999999999999987543211 0
Q ss_pred -----hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -----ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -----~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
...+..++..+.++|.+|+..+|.+||+..+-.
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 262 (267)
T cd06628 225 GENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELL 262 (267)
T ss_pred hccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHh
Confidence 011234778889999999999999999986644
No 133
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.93 E-value=6.9e-26 Score=221.69 Aligned_cols=222 Identities=11% Similarity=0.073 Sum_probs=158.0
Q ss_pred eeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+++.+.||+|+||.||+|... .+..||+|.++..... .. ...+.+|+..|.++.|
T Consensus 7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~-~~--------------------~~~~~~e~~~l~~l~h 65 (266)
T cd05064 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD-KQ--------------------RRGFLAEALTLGQFDH 65 (266)
T ss_pred eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH-HH--------------------HHHHHHHHHHHhcCCC
Confidence 567899999999999999762 3568999988643211 00 1134579999999988
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ +++++. +..++||||++|++|..++... .+ ..++.+|+.+|.+||++|++||||||.|||++.+
T Consensus 66 ~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~ 143 (266)
T cd05064 66 SNI--VRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSD 143 (266)
T ss_pred CCc--CeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCC
Confidence 653 444442 6789999999999998875321 11 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~ 313 (472)
+.++++|||.+........ .............+|+.+....++.++||||||+++++.++ +..+... .
T Consensus 144 ~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~ 215 (266)
T cd05064 144 LVCKISGFRRLQEDKSEAI--------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ 215 (266)
T ss_pred CcEEECCCcccccccccch--------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence 9999999998754321100 00000111112345555566788999999999999999665 4432210 0
Q ss_pred ----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .....++..+.+++.+|+..+|++||+.++-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i 258 (266)
T cd05064 216 DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQI 258 (266)
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 0 1124467888999999999999999998653
No 134
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.2e-26 Score=232.23 Aligned_cols=228 Identities=14% Similarity=0.148 Sum_probs=160.1
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
+-+.-.+++|.|+||.||.|.. .+++.||||..-..+ .++ -+|+.+|.++.|+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-r~k-------------------------nrEl~im~~l~Hp 77 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-RYK-------------------------NRELQIMRKLDHP 77 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-CcC-------------------------cHHHHHHHhcCCc
Confidence 4456679999999999999998 568999999653322 121 2699999988875
Q ss_pred CCCcceeee-c-----C---CceeEEeecCCCChhhhhc------cC----ChHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 170 GFPVPNAVD-C-----N---RHCVIMSLVQGYPLVQVNQ------LQ----NPDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 170 gi~vP~~i~-~-----~---~~~LVMEyi~G~~L~~l~~------~~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
++ .+.+. + . ...+||||++ .+|.+.+. .. ...-+..||+++|.|||..||+||||||.
T Consensus 78 NI--V~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPq 154 (364)
T KOG0658|consen 78 NI--VRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQ 154 (364)
T ss_pred Ce--eeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChh
Confidence 43 11111 1 2 2468999998 45555432 11 22348899999999999999999999999
Q ss_pred cEEEcCC-CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccc-cccCCCCcchheeccCchhhhhhhccC
Q 012042 231 NIMIDDD-EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQE-TTDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 231 NILl~~~-g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~-~~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
|||||.+ |.+||||||+|+.+. +...++.-.+. +|+-+|+- .....|+++.||||.|+++.|++.+.+
T Consensus 155 NlLvD~~tg~LKicDFGSAK~L~---------~~epniSYicS-RyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 155 NLLVDPDTGVLKICDFGSAKVLV---------KGEPNISYICS-RYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred eEEEcCCCCeEEeccCCcceeec---------cCCCceeEEEe-ccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence 9999965 899999999998653 22333332333 44444443 356899999999999999988877532
Q ss_pred Cc-----c--------------h---------------hhhh--------ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 309 GF-----L--------------D---------------KELA--------ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 309 ~~-----l--------------~---------------~~~~--------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
-+ . + ..+. ....+.+.-+++.++|...|.+|.++-+-.
T Consensus 225 lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 225 LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 00 0 0 0111 122455667899999999999999999988
Q ss_pred CCCCCcccccc
Q 012042 347 DDGNESETNET 357 (472)
Q Consensus 347 ~~~~~~~~~~~ 357 (472)
-..=++++-+.
T Consensus 305 ~h~fFdelr~~ 315 (364)
T KOG0658|consen 305 AHPFFDELRDP 315 (364)
T ss_pred cchhhHHhhCc
Confidence 87655454443
No 135
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.93 E-value=9.7e-26 Score=233.08 Aligned_cols=226 Identities=15% Similarity=0.123 Sum_probs=157.4
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+++.||+|++.... ... . .......+|..++..+.|++
T Consensus 44 ~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~--~~~----~-------------~~~~~~~~e~~i~~~~~hp~ 104 (371)
T cd05622 44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE--MIK----R-------------SDSAFFWEERDIMAFANSPW 104 (371)
T ss_pred hcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHH--hhh----h-------------HHHHHHHHHHHHHHhCCCCC
Confidence 467789999999999999998 468999999875211 000 0 00112456888899888765
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+ +..+. .+..|+||||++|++|..++... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 105 i--v~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ik 182 (371)
T cd05622 105 V--VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 182 (371)
T ss_pred C--CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEE
Confidence 3 33332 25689999999999998876432 12 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccccc----CCCCcchheeccCchhhhhhhccCCcch-----
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD----GDDGSDIDTDEGSRLSFASISKTAGFLD----- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~----~~~~~~sDiySlG~~~f~~~t~~~~~l~----- 312 (472)
|+|||++......... ......++...++|+.+.. ..++.++|+||||+++|+++++..++..
T Consensus 183 L~DfG~a~~~~~~~~~--------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~ 254 (371)
T cd05622 183 LADFGTCMKMNKEGMV--------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG 254 (371)
T ss_pred EEeCCceeEcCcCCcc--------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH
Confidence 9999999765322110 0112233334445554422 2378999999999999999997643311
Q ss_pred --hhh---------h-ccCCCHHHHHHHHHHHhcCccc---CCCCCCCCC
Q 012042 313 --KEL---------A-ASGFTRKDQDVIQKFIGGSIEE---SGSDDEGSD 347 (472)
Q Consensus 313 --~~~---------~-~~~~s~~~~~~l~k~l~~~p~~---R~s~~e~~~ 347 (472)
..+ . ...++...+.+|.+||. +|.. |++.++-..
T Consensus 255 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 255 TYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIKR 303 (371)
T ss_pred HHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhc
Confidence 011 1 12478889999999998 4443 556555443
No 136
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.93 E-value=7.5e-26 Score=220.47 Aligned_cols=228 Identities=15% Similarity=0.133 Sum_probs=160.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+++.||+|+||.||+|.+ .+|+.||||.++.........+ ....+.+|+.++.++.|+++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~-----------------~~~~~~~E~~~l~~l~h~~i 66 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSK-----------------EVNALECEIQLLKNLLHERI 66 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHH-----------------HHHHHHHHHHHHHhcCCCCe
Confidence 56789999999999999998 4699999998753221110000 01245679999999988764
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+..++. ...+++|||++|++|...+... . ...++.+++.+|.+||+.||+|+||+|.|||++.++.
T Consensus 67 --~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~ 144 (265)
T cd06652 67 --VQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGN 144 (265)
T ss_pred --eeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCC
Confidence 333331 3467899999999998875321 1 2347889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
++|+|||.+.....+.. ...+...+.+.....+|+.+....++.++|+||||+++++++++..+....
T Consensus 145 ~~l~Dfg~~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 218 (265)
T cd06652 145 VKLGDFGASKRLQTICL------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAI 218 (265)
T ss_pred EEECcCccccccccccc------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHH
Confidence 99999999875543211 011111122222333555555677889999999999999999976432110
Q ss_pred ---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
...+..++.....+|.+|+. +|++||+.++-.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il 259 (265)
T cd06652 219 FKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELL 259 (265)
T ss_pred HHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHh
Confidence 00123456677889999984 899999986643
No 137
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.93 E-value=4e-26 Score=222.37 Aligned_cols=221 Identities=13% Similarity=0.167 Sum_probs=157.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++...... ...+.+|+.++..+.|+++
T Consensus 11 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------~~~~~~e~~~~~~l~h~~i 68 (267)
T cd06645 11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGED----------------------FAVVQQEIIMMKDCKHSNI 68 (267)
T ss_pred HHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhH----------------------HHHHHHHHHHHHhCCCCCe
Confidence 34567899999999999988 568999999986432110 0123468899999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
...+. .+..++||||++|++|..++... . ...++.+++.++.|||..||+|+||||.||+++.++.++
T Consensus 69 --i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~ 146 (267)
T cd06645 69 --VAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVK 146 (267)
T ss_pred --eeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 22222 26789999999999998875322 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcch----hh
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLD----KE 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~~ 314 (472)
|+|||.+....... .....+.+.....+|+.. ....++.++|+||||++++++.++..+... ..
T Consensus 147 l~dfg~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~ 217 (267)
T cd06645 147 LADFGVSAQITATI---------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA 217 (267)
T ss_pred ECcceeeeEccCcc---------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh
Confidence 99999987543110 111112232223344432 145688899999999999999886543211 00
Q ss_pred --------h------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 --------L------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 --------~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. ....++..+.++|.+|+..+|++||+.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll 263 (267)
T cd06645 218 LFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLL 263 (267)
T ss_pred HHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHh
Confidence 0 0124667788999999999999999987643
No 138
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.93 E-value=1e-25 Score=219.28 Aligned_cols=234 Identities=15% Similarity=0.159 Sum_probs=165.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+++.||.|+||.||+|...+|+.+|||.++......... .+ ....+.+|+.+|.++.|.++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~--~~--------------~~~~~~~e~~~l~~l~~~~i- 64 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAA--EK--------------EYEKLQEEVDLLKSLKHVNI- 64 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhH--HH--------------HHHHHHHHHHHHHhcCCCCE-
Confidence 35678999999999999988889999999886443221110 00 01235679999999987653
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+..++ .+..+++|||++|++|.+++... .+ ..++.+++.+|.+||+.||+|+||+|.||+++.++.++|
T Consensus 65 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l 143 (265)
T cd06631 65 -VQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKL 143 (265)
T ss_pred -eeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEe
Confidence 34443 26689999999999998876432 12 237789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----h----
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-----K---- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~---- 313 (472)
+|||.+............. .....+.+..+..+|+......++.++|+||||+++++++++..+... .
T Consensus 144 ~dfg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~ 220 (265)
T cd06631 144 IDFGCARRLAWVGLHGTHS---NMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI 220 (265)
T ss_pred ccchhhHhhhhcccccccc---ccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh
Confidence 9999987542111100000 011112233333455544567788999999999999999997643210 0
Q ss_pred -------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+..+|.+|+..+|++||+..+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 221 GAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0123457888999999999999999999876543
No 139
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=5.9e-26 Score=226.39 Aligned_cols=224 Identities=15% Similarity=0.211 Sum_probs=165.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .+|+.||||.+....... ...+.+|+.++..+.|+++
T Consensus 21 y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~~~e~~~l~~~~h~~i 78 (297)
T cd06656 21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK----------------------KELIINEILVMRENKNPNI 78 (297)
T ss_pred ceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch----------------------HHHHHHHHHHHHhCCCCCE
Confidence 56678999999999999998 579999999875432111 1134578999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.+++ ....++||||++|++|..++... ....++.+++.+|.+||+.||+||||||.|||++.++.++|
T Consensus 79 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l 156 (297)
T cd06656 79 --VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKL 156 (297)
T ss_pred --eeEEEEEecCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence 33333 25689999999999998876422 12247789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----h----
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----E---- 314 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----~---- 314 (472)
+|||.+........ ......+..+..+|+......++.++|+||||+++++.+++..+.... .
T Consensus 157 ~Dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~ 227 (297)
T cd06656 157 TDFGFCAQITPEQS---------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (297)
T ss_pred CcCccceEccCCcc---------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee
Confidence 99999875432211 011122333344555555677889999999999999999976432110 0
Q ss_pred --------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 315 --------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 315 --------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.....++..+.++|.+|+..+|++||+.++-....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 01234667788999999999999999998877644
No 140
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.93 E-value=1.5e-26 Score=228.80 Aligned_cols=229 Identities=10% Similarity=0.149 Sum_probs=162.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|+..+.|++|.||.||+|++ .+++.||+|.++.... ...+. +...||+.+|.+++|++|
T Consensus 78 fe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke--------------k~GFP------ItsLREIniLl~~~H~NI 137 (419)
T KOG0663|consen 78 FEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE--------------KEGFP------ITSLREINILLKARHPNI 137 (419)
T ss_pred HHHHhhcccCcceeEEEeccCCcceeEEeeecccccc--------------cCCCc------chhHHHHHHHHhcCCCCe
Confidence 45568899999999999999 5799999998864321 00111 234689999999998664
Q ss_pred Ccce-ee-e--cCCceeEEeecCCCChhhhhcc---C----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPN-AV-D--CNRHCVIMSLVQGYPLVQVNQL---Q----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~-~i-~--~~~~~LVMEyi~G~~L~~l~~~---~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
.-.+ ++ + .+..|+|||||+ .+|..+++. . ....++.|++.++.|||.+.|+||||||+|+|++..|.+
T Consensus 138 V~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~l 216 (419)
T KOG0663|consen 138 VEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGIL 216 (419)
T ss_pred eeeEEEEeccccceeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcE
Confidence 2222 22 1 267899999998 344444321 1 223488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCC-----cc---
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAG-----FL--- 311 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~-----~l--- 311 (472)
||+|||+|+....|... .+..+-+-++-+|+.+ ....|+...|+||+|+++-++++.++- .+
T Consensus 217 KiaDFGLAR~ygsp~k~---------~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl 287 (419)
T KOG0663|consen 217 KIADFGLAREYGSPLKP---------YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQL 287 (419)
T ss_pred EecccchhhhhcCCccc---------CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHH
Confidence 99999999988776321 1111222233344444 458899999999999999887775320 01
Q ss_pred hh-------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCCCC
Q 012042 312 DK-------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDGNE 351 (472)
Q Consensus 312 ~~-------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~~~ 351 (472)
++ ...+.+.+..=-++|..++..+|.+|.|+++.+.-+=+
T Consensus 288 ~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F 364 (419)
T KOG0663|consen 288 DKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYF 364 (419)
T ss_pred HHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccc
Confidence 00 00111122333478999999999999999999987755
No 141
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.93 E-value=6.2e-26 Score=226.74 Aligned_cols=181 Identities=14% Similarity=0.136 Sum_probs=125.6
Q ss_pred ecceecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 95 VGRQLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
.+..||+|+||.||+|... ++..||+|.+...... ..+.+|+.+|.++.|+++
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~------------------------~~~~~E~~~l~~l~h~ni 60 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS------------------------MSACREIALLRELKHPNV 60 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc------------------------HHHHHHHHHHHhCCCCCe
Confidence 4578999999999999864 4578999987532110 123479999999988653
Q ss_pred Ccceeee------cCCceeEEeecCCCChhhhhcc-----------CC----hHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 172 PVPNAVD------CNRHCVIMSLVQGYPLVQVNQL-----------QN----PDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 172 ~vP~~i~------~~~~~LVMEyi~G~~L~~l~~~-----------~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
..++. ....++||||+++ +|..++.. .. ...++.||+.+|.|||+.||+||||||.
T Consensus 61 --v~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~ 137 (317)
T cd07867 61 --IALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPA 137 (317)
T ss_pred --eeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHH
Confidence 22222 1456899999986 44333210 01 1247889999999999999999999999
Q ss_pred cEEE----cCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhh
Q 012042 231 NIMI----DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 231 NILl----~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t 305 (472)
|||+ +.++.++|+|||++.....+... ........+...+.+|+.+.+ ..++.++|+||||+++++++|
T Consensus 138 Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~t 211 (317)
T cd07867 138 NILVMGEGPERGRVKIADMGFARLFNSPLKP------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred HEEEccCCCCCCcEEEeeccceeccCCCccc------ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHh
Confidence 9999 45678999999999865433211 011112222323345554433 458999999999999999999
Q ss_pred ccC
Q 012042 306 KTA 308 (472)
Q Consensus 306 ~~~ 308 (472)
+..
T Consensus 212 g~~ 214 (317)
T cd07867 212 SEP 214 (317)
T ss_pred CCC
Confidence 753
No 142
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.93 E-value=8.4e-26 Score=224.98 Aligned_cols=226 Identities=13% Similarity=0.105 Sum_probs=160.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+. +++.||+|.++.....-. ...+.+|+.++.+|.|+++
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~h~nI 66 (301)
T cd07873 8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA---------------------PCTAIREVSLLKDLKHANI 66 (301)
T ss_pred eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc---------------------hhHHHHHHHHHHhcCCCCc
Confidence 567799999999999999884 689999998864321100 0123469999999988764
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. +..++||||+++ +|...+... ....++.+|+.+|.+||+.||+||||||.|||++.++.+
T Consensus 67 --~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~ 143 (301)
T cd07873 67 --VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGEL 143 (301)
T ss_pred --ceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcE
Confidence 333332 568999999986 665543211 123477899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||.+.....+... ...........+|+.+. ...++.++|+||||+++++++++.......
T Consensus 144 kl~dfg~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~ 214 (301)
T cd07873 144 KLADFGLARAKSIPTKT---------YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQL 214 (301)
T ss_pred EECcCcchhccCCCCCc---------ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999998754332211 00111222334455433 345788999999999999999875322100
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDGNE 351 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~~~ 351 (472)
......++..++++|.+||..+|.+|||++|...-.-+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f 289 (301)
T cd07873 215 HFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYF 289 (301)
T ss_pred HHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 00012467778899999999999999999887775544
No 143
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.93 E-value=9.8e-26 Score=221.46 Aligned_cols=223 Identities=11% Similarity=0.053 Sum_probs=158.5
Q ss_pred eeecceecccCceeEEEEEeCC-C-----CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARED-G-----TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~-g-----~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||+|+||.||+|.... + ..||+|.++...... ....+.+|+.+|.++
T Consensus 7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~---------------------~~~~~~~ei~~l~~l 65 (283)
T cd05048 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK---------------------VQQEFRQEAELMSDL 65 (283)
T ss_pred cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHH---------------------HHHHHHHHHHHHHhc
Confidence 3556889999999999998732 2 579999875321110 012355799999999
Q ss_pred hhCCCCcceeee----cCCceeEEeecCCCChhhhhccCC----------------------hHHHHHHHHHHHHHHHHC
Q 012042 167 EDHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN----------------------PDSVFETIIGLVVRLAEH 220 (472)
Q Consensus 167 ~~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~----------------------~~~i~~qIl~aL~~LH~~ 220 (472)
.|+++ ..+++ ....+++|||++|++|.+++.... ...++.+++.+|.+||+.
T Consensus 66 ~h~~i--~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~ 143 (283)
T cd05048 66 QHPNI--VCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH 143 (283)
T ss_pred CCccc--ceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 88764 33333 256899999999999987653210 124788999999999999
Q ss_pred CceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchh
Q 012042 221 GLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLS 300 (472)
Q Consensus 221 GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~ 300 (472)
||+||||||.||++++++.++|+|||.+.....+...... .....+...++|+......++.++|+||||+++
T Consensus 144 ~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il 216 (283)
T cd05048 144 HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQ-------SKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL 216 (283)
T ss_pred CeeccccccceEEEcCCCcEEECCCcceeecccccccccc-------CCCcccccccCHHHhccCcCchhhhHHHHHHHH
Confidence 9999999999999999999999999998754322111100 011112223355545567789999999999999
Q ss_pred hhhhh-ccCCcc-----h--hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 301 FASIS-KTAGFL-----D--KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 301 f~~~t-~~~~~l-----~--~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+++++ +..+.. + ..+ ....++.++.+++.+|++.+|.+||+..+-
T Consensus 217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i 276 (283)
T cd05048 217 WEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDI 276 (283)
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99987 432211 0 001 124578899999999999999999998753
No 144
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.93 E-value=1.2e-25 Score=217.85 Aligned_cols=220 Identities=14% Similarity=0.067 Sum_probs=160.1
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|...++..||||.+....... ..+.+|+.++.++.|+++
T Consensus 8 ~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~-----------------------~~~~~e~~~l~~l~h~~i- 63 (261)
T cd05034 8 LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP-----------------------EAFLQEAQIMKKLRHDKL- 63 (261)
T ss_pred eeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCH-----------------------HHHHHHHHHHhhCCCCCE-
Confidence 56789999999999999998777889999886432211 124469999999987653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccCC--------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN--------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~--------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
++.+.. ...+++|||++|++|.+++.... ...++.+++.++.+||+.|++|+||||.||++++++.+
T Consensus 64 -~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~ 142 (261)
T cd05034 64 -VQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVC 142 (261)
T ss_pred -eeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCE
Confidence 444432 66899999999999988763211 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD------- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~------- 312 (472)
+|+|||.+....+... ...........+.+|+...+..++.++|+||||++++++++ +..+...
T Consensus 143 ~l~d~g~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~ 214 (261)
T cd05034 143 KIADFGLARLIEDDEY--------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVL 214 (261)
T ss_pred EECccccceeccchhh--------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999876532110 00000011111234444455778999999999999999988 5432211
Q ss_pred -hh------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 -KE------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 -~~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. .....++.++.+++.+|+..+|++||+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l 254 (261)
T cd05034 215 EQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYL 254 (261)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 00 0123457789999999999999999998653
No 145
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.93 E-value=1.3e-25 Score=216.45 Aligned_cols=224 Identities=16% Similarity=0.179 Sum_probs=162.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|++|.||+|.. .+|+.|++|.+........ ....+.+|+.++.++.|+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 61 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRR--------------------EREEAIDEARVLAKLDSSYI 61 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHH--------------------HHHHHHHHHHHHHhcCCCCe
Confidence 45678899999999999998 4689999998763221111 11245679999999988654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.++. .+..++||||++|++|..++... .+ ..++.+++.+|.+||..||+|+||||.||+++.++.
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~ 139 (256)
T cd08529 62 --IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDN 139 (256)
T ss_pred --ehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCC
Confidence 22232 25689999999999998875321 11 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--hh----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--DK---- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~~---- 313 (472)
++|+|||.+......... .....+.....+|+......++.++|+||||+++++++++..+.. ..
T Consensus 140 ~~l~df~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 210 (256)
T cd08529 140 VKIGDLGVAKLLSDNTNF---------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALI 210 (256)
T ss_pred EEEcccccceeccCccch---------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999998765422110 011122222335554456778899999999999999999754321 00
Q ss_pred -h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++..+.++|.+|+..+|++||++.+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 211 LKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 0 012256788999999999999999999877543
No 146
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=6.6e-26 Score=225.92 Aligned_cols=222 Identities=17% Similarity=0.243 Sum_probs=163.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||.+....... ...+.+|+.++..+.|+++
T Consensus 22 y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~----------------------~~~~~~e~~~l~~~~h~~v 79 (296)
T cd06654 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----------------------KELIINEILVMRENKNPNI 79 (296)
T ss_pred eeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch----------------------HHHHHHHHHHHHhCCCCCE
Confidence 66778999999999999998 578999999876432111 0134578999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
..+++ ....|+||||++|++|..++... . ...++.+++.+|.+||..||+||||||.|||++.++.++|
T Consensus 80 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl 157 (296)
T cd06654 80 --VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL 157 (296)
T ss_pred --eeEEEEEEeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEE
Confidence 33333 26789999999999998876422 1 2347889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---------
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--------- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--------- 313 (472)
+|||.+......... .....+...+.+|+.+....++.++|+||||+++|+++++..++...
T Consensus 158 ~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~ 228 (296)
T cd06654 158 TDFGFCAQITPEQSK---------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (296)
T ss_pred Cccccchhccccccc---------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH
Confidence 999998754321110 01112223334555455667889999999999999999976543110
Q ss_pred ------hh-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------EL-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++..+.++|.+|+..+|++||++.+-..
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 00 12346778889999999999999999988765
No 147
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.93 E-value=8.3e-26 Score=234.59 Aligned_cols=223 Identities=17% Similarity=0.245 Sum_probs=172.4
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+++.||.|.||.||+|+.. +|+.+|+|++........ .....+.+|+.+|++|..+
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-------------------~~~~~v~~Ev~il~~l~~h- 95 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-------------------EDREDVRREVAILQQLSGH- 95 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-------------------ccHHHHHHHHHHHHhccCC-
Confidence 5888999999999999999995 599999999853211100 0223567899999999832
Q ss_pred CCcceeeec-------CCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC-
Q 012042 171 FPVPNAVDC-------NRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD- 237 (472)
Q Consensus 171 i~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~- 237 (472)
|+++.. ...++|||+|.|+.|.+.+... ....++.+++.++.|||+.||+||||||+|+|+...
T Consensus 96 ---pniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~ 172 (382)
T KOG0032|consen 96 ---PNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD 172 (382)
T ss_pred ---CCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc
Confidence 444432 5679999999999998865332 233589999999999999999999999999999732
Q ss_pred ---CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 238 ---EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 238 ---g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
+.++++|||+|+.... -..+...++..++++|+......++..+|+||+|+.+|.++.+..++...
T Consensus 173 ~~~~~ik~~DFGla~~~~~----------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 173 EGSGRIKLIDFGLAKFIKP----------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred CCCCcEEEeeCCCceEccC----------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 4799999999986543 12233456777778888766689999999999999999999876554321
Q ss_pred ------hhhc----------cCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------ELAA----------SGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------~~~~----------~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+.. ..++...+..|.+|+..+|..|+++.+-+.
T Consensus 243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1111 346778889999999999999999988776
No 148
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.93 E-value=8.7e-26 Score=219.03 Aligned_cols=224 Identities=15% Similarity=0.184 Sum_probs=161.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|... +|+.||+|.++........ ....+.+|+.++.++.|.++
T Consensus 4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-------------------~~~~~~~ei~~l~~~~~~~i 64 (267)
T cd08224 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK-------------------ARQDCLKEIDLLKQLDHPNV 64 (267)
T ss_pred eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchh-------------------hHHHHHHHHHHHHhCCCCCe
Confidence 566789999999999999995 7999999987632211100 01245679999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc----C--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL----Q--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~----~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.++. .+..++||||++|++|..++.. . .+ ..++.+++.+|.+||+.||+||||+|.||+++.+
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~ 142 (267)
T cd08224 65 --IKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITAT 142 (267)
T ss_pred --eeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCC
Confidence 33332 2668999999999999876531 1 11 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+.++|+|||.+......... ...........+|+......++.++|+||||+++++++++..+....
T Consensus 143 ~~~~l~d~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 213 (267)
T cd08224 143 GVVKLGDLGLGRFFSSKTTA---------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred CcEEEeccceeeeccCCCcc---------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccH
Confidence 99999999998754322110 01112222233555445667889999999999999999875432100
Q ss_pred -------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+....++..+.++|.+|+..+|++||+..+-.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il 259 (267)
T cd08224 214 YSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVL 259 (267)
T ss_pred HHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 011236777899999999999999999987643
No 149
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.93 E-value=6.5e-26 Score=221.13 Aligned_cols=221 Identities=12% Similarity=0.170 Sum_probs=156.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DH 169 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~ 169 (472)
.|.+.+.||.|+||.||+|.. .+++.||||++....... ..+.+|+.++.++. |+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~-----------------------~~~~~e~~~l~~~~~h~ 63 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-----------------------EEIKQEINMLKKYSHHR 63 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccH-----------------------HHHHHHHHHHHHhcCCC
Confidence 356678899999999999988 468999999986432111 12346888888884 54
Q ss_pred CCCcceeeec----------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 170 GFPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 170 gi~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
++ ...++. ...+++|||+++++|..++... .+ ..++.|++.+|.|||++||+|+||||.|
T Consensus 64 ~i--~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~n 141 (272)
T cd06637 64 NI--ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN 141 (272)
T ss_pred Ce--eeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH
Confidence 42 332221 2468999999999998875421 12 2378899999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhhc
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
|++++++.++|+|||++........ ....+.+.....+|+... ...++.++|+||||+++++++++
T Consensus 142 ili~~~~~~~l~Dfg~~~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g 212 (272)
T cd06637 142 VLLTENAEVKLVDFGVSAQLDRTVG---------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212 (272)
T ss_pred EEECCCCCEEEccCCCceecccccc---------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999999875432110 011112222223444322 34578899999999999999997
Q ss_pred cCCcch---------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 307 TAGFLD---------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 307 ~~~~l~---------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+.-+ .......++.++.++|.+|+..+|.+|||..+..
T Consensus 213 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 267 (272)
T cd06637 213 APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLM 267 (272)
T ss_pred CCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 643211 0111235678999999999999999999986543
No 150
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.93 E-value=1.4e-25 Score=224.36 Aligned_cols=221 Identities=12% Similarity=0.057 Sum_probs=154.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCE--EEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTV--LAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-ED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~--VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~ 168 (472)
+++.+.||+|+||.||+|.+ .+|.. +|+|.+....... ....+.+|+.++.++ .|
T Consensus 9 ~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~---------------------~~~~~~~Ei~~l~~l~~h 67 (303)
T cd05088 9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---------------------DHRDFAGELEVLCKLGHH 67 (303)
T ss_pred ceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHH---------------------HHHHHHHHHHHHHHhcCC
Confidence 45678999999999999997 45654 5666554221100 012345799999999 56
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC----------------------ChHHHHHHHHHHHHHHHHCCc
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----------------------NPDSVFETIIGLVVRLAEHGL 222 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----------------------~~~~i~~qIl~aL~~LH~~GI 222 (472)
+++ +++++. +..++||||++|++|..++... ....++.+|+.+|.+||++||
T Consensus 68 ~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 145 (303)
T cd05088 68 PNI--INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 145 (303)
T ss_pred CCc--ceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 543 444432 6689999999999998875321 012478899999999999999
Q ss_pred eeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhh
Q 012042 223 IHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 223 IHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
+||||||.|||++.++.++|+|||++...... ..... ....+.| +|+......++.++|+||||++++
T Consensus 146 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 214 (303)
T cd05088 146 IHRDLAARNILVGENYVAKIADFGLSRGQEVY-----VKKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 214 (303)
T ss_pred cccccchheEEecCCCcEEeCccccCcccchh-----hhccc------CCCcccccCHHHHhccCCcccccchhhhhHHH
Confidence 99999999999999999999999998532111 00000 0111223 444344566889999999999999
Q ss_pred hhhh-ccCCcch-------hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 302 ASIS-KTAGFLD-------KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 302 ~~~t-~~~~~l~-------~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+++| +..+... ..+ ....++..+.++|.+|+..+|++||+.++...
T Consensus 215 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 275 (303)
T cd05088 215 EIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 275 (303)
T ss_pred HHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9987 4432210 001 12346788899999999999999999987654
No 151
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.93 E-value=9.9e-26 Score=223.46 Aligned_cols=220 Identities=15% Similarity=0.094 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+++.||||.+......... ......+|+.+|.++.|+++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~-------------------~~~~~~~E~~il~~l~~~~i 62 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK-------------------GESMALNEKQILEKVNSRFV 62 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH-------------------HHHHHHHHHHHHHhCCCCCe
Confidence 35568899999999999998 47999999987532111000 01123469999999987643
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc----CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL----QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~----~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
...+. .+..++||||++|++|...+.. ..+ ..++.|++.+|.|||+.||+||||||.||+++.++.
T Consensus 63 --~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~ 140 (285)
T cd05630 63 --VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGH 140 (285)
T ss_pred --eeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC
Confidence 22222 2568999999999999876521 111 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch------h
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------K 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------~ 313 (472)
++|+|||.+....... ......+....++|+......++.++|+||||+++++++++..+... .
T Consensus 141 ~~l~Dfg~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~ 210 (285)
T cd05630 141 IRISDLGLAVHVPEGQ----------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 210 (285)
T ss_pred EEEeeccceeecCCCc----------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH
Confidence 9999999986542110 00111222233455555567789999999999999999997643210 0
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
......++..+.++|.+|+..+|++|||.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ 251 (285)
T cd05630 211 EEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQ 251 (285)
T ss_pred HHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCC
Confidence 011235788899999999999999999954
No 152
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=5.4e-26 Score=236.34 Aligned_cols=221 Identities=14% Similarity=0.160 Sum_probs=159.2
Q ss_pred eeeecceecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
-|.+...||.|+||.||+|... .+..||||.+.... ...+|+.+|.+|.|
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~---------------------------~~~~E~~il~~l~h 145 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK---------------------------TPGREIDILKTISH 145 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc---------------------------cHHHHHHHHHhcCC
Confidence 3788899999999999999763 46789999764321 12369999999998
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+++ ++++.. ...|+|||++.+ .|..++... ....++.||+.+|.|||++|||||||||.|||++.++
T Consensus 146 ~~i--v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~ 222 (392)
T PHA03207 146 RAI--INLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE 222 (392)
T ss_pred CCc--cceeeeEeeCCEEEEEehhcCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC
Confidence 753 333332 568999999975 555543221 1234788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||++......... .....+.+...+.+|+......++.++|+||||+++++++++..++...
T Consensus 223 ~~~l~DfG~a~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~ 295 (392)
T PHA03207 223 NAVLGDFGAACKLDAHPDT-------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS 295 (392)
T ss_pred CEEEccCccccccCccccc-------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc
Confidence 9999999999755322110 0011223333333555555677899999999999999998865332110
Q ss_pred ---------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+...+++.+++.+|.+||..+|++||++.|...-
T Consensus 296 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 296 SSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00012456677889999999999999999987764
Q ss_pred C
Q 012042 349 G 349 (472)
Q Consensus 349 ~ 349 (472)
.
T Consensus 376 p 376 (392)
T PHA03207 376 P 376 (392)
T ss_pred c
Confidence 4
No 153
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.93 E-value=1.5e-25 Score=216.41 Aligned_cols=223 Identities=15% Similarity=0.145 Sum_probs=161.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|++|.||++.+. +++.||||.+......-. ....+.+|+.++.++.|+++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 61 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRR--------------------ERKAAEQEAQLLSQLKHPNI 61 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHH--------------------HHHHHHHHHHHHHhCCCCCe
Confidence 567899999999999999984 688999998753211100 01234578999999987653
Q ss_pred Ccceeeec-----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
..++.. +..+++|||++|++|.+.+... .+ ..++.+++.++.+||+.||+||||+|.||+++.++
T Consensus 62 --~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~ 139 (257)
T cd08223 62 --VAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN 139 (257)
T ss_pred --eeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC
Confidence 222221 2468999999999998765321 11 24788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----h-
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----K- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~- 313 (472)
.++|+|||.+.....+.. ......+....++|+......++.++|+||||+++++++++...... .
T Consensus 140 ~~~l~df~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~ 210 (257)
T cd08223 140 IIKVGDLGIARVLENQCD---------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL 210 (257)
T ss_pred cEEEecccceEEecccCC---------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 999999999876533211 01112233233455555667788999999999999999987543211 0
Q ss_pred --hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ ....++..+.++|.+|++.+|++||+..+-.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 252 (257)
T cd08223 211 VYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSIL 252 (257)
T ss_pred HHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 01 1234678899999999999999999987643
No 154
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.93 E-value=1.3e-25 Score=218.04 Aligned_cols=219 Identities=13% Similarity=0.062 Sum_probs=155.7
Q ss_pred eecccCceeEEEEEe---CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 98 QLGVGKESDIFEVAR---EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~---~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.||+|+||.||+|.. .++..+|||+++....... ....+..|+.+|.++.|+++ +
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i--~ 59 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPA--------------------LKDELLREANVMQQLDNPYI--V 59 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHH--------------------HHHHHHHHHHHHHhCCCCCc--c
Confidence 589999999999965 3578899998764321111 11234578999999988764 3
Q ss_pred eeeec---CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 175 NAVDC---NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 175 ~~i~~---~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
.+++. ...++||||+++++|..++... ....++.|++.+|.+||++||+||||||.|||++.++.++|+||
T Consensus 60 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Df 139 (257)
T cd05116 60 RMIGICEAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDF 139 (257)
T ss_pred eEEEEEcCCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCC
Confidence 33432 5678999999999998876322 12347889999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcchh-----------
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLDK----------- 313 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~~----------- 313 (472)
|.+.......... ............++|+......++.++|+||||+++++.++ +..+....
T Consensus 140 g~~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~ 213 (257)
T cd05116 140 GLSKALGADENYY------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213 (257)
T ss_pred ccccccCCCCCee------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence 9997654321100 00000011111234554455678889999999999999987 54322110
Q ss_pred ---hhhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 314 ---ELAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 314 ---~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
...+..++.+++++|.+|+..+|++||+.++
T Consensus 214 ~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~ 247 (257)
T cd05116 214 GERMECPQRCPPEMYDLMKLCWTYGVDERPGFAV 247 (257)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHH
Confidence 0113457889999999999999999999764
No 155
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.93 E-value=1.2e-25 Score=219.10 Aligned_cols=219 Identities=14% Similarity=0.080 Sum_probs=158.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.+.+.||.|++|.||+|.+ .+++.||+|++....... ..+.+|+.+|.++.|+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-----------------------~~~~~e~~~l~~l~h~~i 64 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----------------------EEFLKEAAVMKEIKHPNL 64 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHH-----------------------HHHHHHHHHHHhCCCCCh
Confidence 45678999999999999998 468899999875321110 124579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
..++. .+..+++|||++|++|.+.+... .. ..++.|++.+|.+||+.|++||||||.||++++++.
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~ 142 (263)
T cd05052 65 --VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 142 (263)
T ss_pred --hheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCc
Confidence 22232 25678999999999998875321 11 236789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD----- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~----- 312 (472)
++|+|||.+.....+.... .+ . .....+| +|+......++.++|+||||++++++++ +..+...
T Consensus 143 ~kl~df~~~~~~~~~~~~~------~~-~--~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~ 213 (263)
T cd05052 143 VKVADFGLSRLMTGDTYTA------HA-G--AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 213 (263)
T ss_pred EEeCCCccccccccceeec------cC-C--CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999987654321100 00 0 0011233 3443356778899999999999999988 4332110
Q ss_pred --hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 --KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 --~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. .....++.++.++|.+|+..+|++||+..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l 255 (263)
T cd05052 214 VYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEI 255 (263)
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 00 0124567889999999999999999998765
No 156
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93 E-value=1.2e-25 Score=217.35 Aligned_cols=221 Identities=15% Similarity=0.175 Sum_probs=160.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .+++.+++|++....... ...+.+|+.++.++.|+++
T Consensus 5 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------~~~~~~e~~~l~~~~h~~i 62 (262)
T cd06613 5 YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----------------------FEIIQQEISMLKECRHPNI 62 (262)
T ss_pred eEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----------------------HHHHHHHHHHHHhCCCCCh
Confidence 56678999999999999998 468899999987442211 1235579999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++ .+..|++|||++|++|..++... .+ ..++.+++.+|.+||++||+|+||+|.||+++.++.+
T Consensus 63 --~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~ 140 (262)
T cd06613 63 --VAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDV 140 (262)
T ss_pred --hceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCE
Confidence 33333 26689999999999998865322 11 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC---CCCcchheeccCchhhhhhhccCCcchh----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG---DDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~---~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+|+|||.+........ ....+....+..+|+..... .++.++|+||||+++++++++..+....
T Consensus 141 ~l~d~g~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 141 KLADFGVSAQLTATIA---------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred EECccccchhhhhhhh---------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999875432110 00111222233455544334 6888999999999999999975432110
Q ss_pred h---h-----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 E---L-----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ~---~-----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. + ....++.+++++|.+|+..+|.+||+.++-.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 258 (262)
T cd06613 212 ALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLL 258 (262)
T ss_pred HHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 0 0 1123467788999999999999999986643
No 157
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.93 E-value=1e-25 Score=223.20 Aligned_cols=225 Identities=11% Similarity=0.085 Sum_probs=160.7
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
-.|++.+.||.|+||.||+|.+ .++..|++|++....... .....+|+.++.++.|+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~----------------------~~~~~~e~~~l~~l~h~ 69 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----------------------LEDYMVEIEILATCNHP 69 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHH----------------------HHHHHHHHHHHHhCCCC
Confidence 3466788999999999999998 468999999986432111 11244688999999886
Q ss_pred CCCcceeee----cCCceeEEeecCCCChhhhhcc---C-C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 170 GFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---Q-N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 170 gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~-~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
++ +.+++ .+..++||||++|++|..++.. . . ...++.|++.++.+||++||+||||||.||+++.++
T Consensus 70 ~i--~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~ 147 (292)
T cd06644 70 YI--VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG 147 (292)
T ss_pred cE--eeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC
Confidence 53 33333 2678999999999998775421 1 1 134788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhhccCCcchh
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
.++|+|||.+......... ...+.+..+..+|+... ...++.++|+||||+++++++++....-..
T Consensus 148 ~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 148 DIKLADFGVSAKNVKTLQR---------RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred CEEEccCccceeccccccc---------cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 9999999988643221110 00111222333444321 344678999999999999999976432110
Q ss_pred -------h---------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -------E---------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -------~---------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. .....++.++.++|.+|+..+|++||+.++-.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 219 NPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 0124567788999999999999999998766543
No 158
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.93 E-value=1.7e-25 Score=217.62 Aligned_cols=222 Identities=15% Similarity=0.127 Sum_probs=156.4
Q ss_pred eecceecccCceeEEEEEeC-C---CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 94 AVGRQLGVGKESDIFEVARE-D---GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~---g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
.+++.||+|+||.||+|... + +..||||.++........ ...+.+|+..|..+.|+
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~e~~~l~~l~h~ 61 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSE--------------------IEEFLSEAACMKDFDHP 61 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHH--------------------HHHHHHHHHHHHhCCCC
Confidence 56789999999999999873 2 478999988643211111 11355789999999887
Q ss_pred CCCcceeeec----------CCceeEEeecCCCChhhhhccC--------Ch----HHHHHHHHHHHHHHHHCCceeccC
Q 012042 170 GFPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ--------NP----DSVFETIIGLVVRLAEHGLIHCDF 227 (472)
Q Consensus 170 gi~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~--------~~----~~i~~qIl~aL~~LH~~GIIHrDL 227 (472)
++ ..+++. ...+++|||+++++|..++... .+ ..++.+++.+|.|||+.||+||||
T Consensus 62 ~i--v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dl 139 (273)
T cd05035 62 NV--MKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDL 139 (273)
T ss_pred Ce--eeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 53 333331 1368999999999998764211 11 237889999999999999999999
Q ss_pred CCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhh-
Q 012042 228 NEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASIS- 305 (472)
Q Consensus 228 KP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t- 305 (472)
||.||++++++.++|+|||.+........ +.... .....+. ++|+......++.++|+||||++++++++
T Consensus 140 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~------~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~ 211 (273)
T cd05035 140 AARNCMLREDMTVCVADFGLSKKIYSGDY--YRQGR------IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 211 (273)
T ss_pred chheEEECCCCeEEECCccceeecccccc--ccccc------cccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhC
Confidence 99999999999999999999876532211 00000 0111122 34444445778899999999999999987
Q ss_pred ccCCcch--------h------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 306 KTAGFLD--------K------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 306 ~~~~~l~--------~------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+..+... . .-....++.++.++|.+|+..+|.+||+..|-
T Consensus 212 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~ 265 (273)
T cd05035 212 GQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKL 265 (273)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 4322110 0 00134578899999999999999999998764
No 159
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.93 E-value=1.5e-25 Score=218.03 Aligned_cols=220 Identities=13% Similarity=0.049 Sum_probs=158.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||.|...++..||||.++...... ..+.+|+.++.++.|+++
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~-----------------------~~~~~e~~~l~~l~h~~i- 61 (256)
T cd05113 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-----------------------DEFIEEAKVMMKLSHEKL- 61 (256)
T ss_pred eEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccH-----------------------HHHHHHHHHHhcCCCCCe-
Confidence 45678999999999999987666679999876332110 123569999999988653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
++.++. ...+++|||+.+++|..++... .+ ..++.+|+.+|.+||+.|++|+||||.||+++.++.++
T Consensus 62 -~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~k 140 (256)
T cd05113 62 -VQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVK 140 (256)
T ss_pred -eeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEE
Confidence 444443 4579999999999998875321 11 24889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccc-ccccccCCCCcchheeccCchhhhhhh-ccCCc--ch-----
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLN-FQETTDGDDGSDIDTDEGSRLSFASIS-KTAGF--LD----- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~-~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~--l~----- 312 (472)
|+|||.+.....+... .... ....+.|. |+......++.++|+||||++++++.+ +..+. ..
T Consensus 141 l~d~g~~~~~~~~~~~-------~~~~--~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~ 211 (256)
T cd05113 141 VSDFGLSRYVLDDEYT-------SSVG--SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETV 211 (256)
T ss_pred ECCCccceecCCCcee-------ecCC--CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH
Confidence 9999998755322110 0000 11123343 443345678999999999999999987 53221 10
Q ss_pred hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+ ....++.++.+++.+|+..+|++||+..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll 252 (256)
T cd05113 212 EKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLL 252 (256)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 000 1234678899999999999999999987643
No 160
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.93 E-value=1.7e-25 Score=224.71 Aligned_cols=225 Identities=13% Similarity=0.019 Sum_probs=158.8
Q ss_pred eeecceecccCceeEEEEEe-CCCC----EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGT----VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~----~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|++.+.||+|+||.||+|.+ .+|. .||||+++.....- ....+..|+.++..+.
T Consensus 9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~ 67 (316)
T cd05108 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK---------------------ANKEILDEAYVMASVD 67 (316)
T ss_pred ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHH---------------------HHHHHHHHHHHHHhCC
Confidence 56679999999999999986 3444 48999875321100 0113456889999998
Q ss_pred hCCCCcceeeec---CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ .+.++. ...+++|+|+++++|.+.+... .+ ..++.+|+.+|.|||+.||+||||||.|||++.+
T Consensus 68 h~ni--v~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~ 145 (316)
T cd05108 68 NPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTP 145 (316)
T ss_pred CCCC--CeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCC
Confidence 8764 344442 5678999999999998865322 11 2477899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~ 313 (472)
+.++|+|||.+......... ... ........+++|+......++.++|+||||++++++++ +..+.-. .
T Consensus 146 ~~~kl~DfG~a~~~~~~~~~------~~~-~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~ 218 (316)
T cd05108 146 QHVKITDFGLAKLLGADEKE------YHA-EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 218 (316)
T ss_pred CcEEEccccccccccCCCcc------eec-cCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99999999999765321110 000 00011112234554456788999999999999999887 4332110 0
Q ss_pred h----h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 E----L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ~----~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. + .....+..+..++.+|+..+|++||+..+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 219 EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0 0 01335678889999999999999999988765
No 161
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=2.6e-25 Score=221.80 Aligned_cols=225 Identities=16% Similarity=0.227 Sum_probs=165.6
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||.|++|.||+|.+ .+|+.||||.+....... ...+.+|+..+..+.|++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----------------------~~~~~~e~~~l~~l~h~~ 77 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK----------------------KELIINEILVMKELKNPN 77 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch----------------------HHHHHHHHHHHHhcCCCc
Confidence 477889999999999999998 579999999875322111 113457899999998876
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+ +.+++ ....++||||++|++|..++... . ...++.+++.+|.+||+.|++||||||.||+++.++.++
T Consensus 78 i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~k 155 (296)
T cd06655 78 I--VNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVK 155 (296)
T ss_pred e--eeeeeeEecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 4 33333 26689999999999998875432 1 124778999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||.+........ ......+...+.+|+......++.++|+||||+++++++++..++... .
T Consensus 156 l~dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~ 226 (296)
T cd06655 156 LTDFGFCAQITPEQS---------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL 226 (296)
T ss_pred EccCccchhcccccc---------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999875432111 001112222233555445667889999999999999999976432110 0
Q ss_pred h---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 315 L---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 315 ~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
+ ....++..+.++|.+|+..+|++||+..+-....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 227 IATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred HHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 0 1234677889999999999999999998776644
No 162
>PHA02988 hypothetical protein; Provisional
Probab=99.93 E-value=1.1e-25 Score=223.52 Aligned_cols=216 Identities=7% Similarity=0.001 Sum_probs=157.0
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..||+|+++.||+|.. +|+.||||.++........ ....+.+|+.+|.++.|+++ .+.
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~-------------------~~~~~~~E~~~l~~l~h~nI--v~~ 83 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKV-------------------LIDITENEIKNLRRIDSNNI--LKI 83 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHH-------------------HHHHHHHHHHHHHhcCCCCE--EEE
Confidence 5689999999999987 6889999988643211110 01235689999999998753 444
Q ss_pred eec--------CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcEE
Q 012042 177 VDC--------NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 177 i~~--------~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~vk 241 (472)
++. ...++||||++|++|.+++... ....++.+++.+|.+||. .+++||||||.|||++.++.++
T Consensus 84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~k 163 (283)
T PHA02988 84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLK 163 (283)
T ss_pred eeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEE
Confidence 431 3578999999999999886432 123578899999999998 5999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--CCCCcchheeccCchhhhhhhccCCcch---h---
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLD---K--- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~---~--- 313 (472)
|+|||++.....+.. .+ .+...+.+|+.... ..++.++||||||+++++++++..+.-. .
T Consensus 164 l~dfg~~~~~~~~~~--------~~----~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 164 IICHGLEKILSSPPF--------KN----VNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred EcccchHhhhccccc--------cc----cCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 999999875432211 11 11122234443322 5789999999999999999997643211 0
Q ss_pred -hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ .+...+.+++++|.+|++.+|++|||.+|..
T Consensus 232 ~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell 273 (283)
T PHA02988 232 DLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEIL 273 (283)
T ss_pred HHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 01 0125678899999999999999999987653
No 163
>PTZ00284 protein kinase; Provisional
Probab=99.93 E-value=9.4e-26 Score=239.84 Aligned_cols=220 Identities=13% Similarity=0.068 Sum_probs=154.0
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+++.||||+++.... +. .....|+.++..+.+.+
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~----------------------~~~~~e~~~l~~l~~~~ 186 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YT----------------------RDAKIEIQFMEKVRQAD 186 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hH----------------------HHHHHHHHHHHHHhhcC
Confidence 477889999999999999998 4688999999863210 10 12345788888887654
Q ss_pred C----Ccceeeec-----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHH-CCceeccCCCCcEEE
Q 012042 171 F----PVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAE-HGLIHCDFNEFNIMI 234 (472)
Q Consensus 171 i----~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl 234 (472)
+ .++.++.+ ...||||+++ |+.|..++... ....++.||+.+|.|||. .|||||||||.|||+
T Consensus 187 ~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl 265 (467)
T PTZ00284 187 PADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILM 265 (467)
T ss_pred cccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE
Confidence 2 23333332 4578999988 45555543211 123588999999999997 699999999999999
Q ss_pred cCCC----------------cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCc
Q 012042 235 DDDE----------------KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSR 298 (472)
Q Consensus 235 ~~~g----------------~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~ 298 (472)
+.++ .+||+|||.+....+. ...+++...+++|+.+.+..++.++||||||+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~------------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGv 333 (467)
T PTZ00284 266 ETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS------------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC 333 (467)
T ss_pred ecCCcccccccccccCCCCceEEECCCCccccCccc------------cccccCCccccCcHHhhcCCCCcHHHHHHHHH
Confidence 8655 4999999987533211 11234444555677666778999999999999
Q ss_pred hhhhhhhccCCcch---hh----h-hc----------------------------c-------------------CCCHH
Q 012042 299 LSFASISKTAGFLD---KE----L-AA----------------------------S-------------------GFTRK 323 (472)
Q Consensus 299 ~~f~~~t~~~~~l~---~~----~-~~----------------------------~-------------------~~s~~ 323 (472)
++|+++++...+.. .. + .. . ..+..
T Consensus 334 il~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (467)
T PTZ00284 334 IIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDL 413 (467)
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHH
Confidence 99999997643210 00 0 00 0 01223
Q ss_pred HHHHHHHHHhcCcccCCCCCCCCC
Q 012042 324 DQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 324 ~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+.++|.+||..||++|||+++...
T Consensus 414 ~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 414 LCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHHHHHhCCcChhhCCCHHHHhc
Confidence 458999999999999999999876
No 164
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.93 E-value=1.6e-25 Score=222.34 Aligned_cols=222 Identities=14% Similarity=0.131 Sum_probs=155.7
Q ss_pred eeecceecccCceeEEEEEeCC-------------C--CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHH
Q 012042 93 TAVGRQLGVGKESDIFEVARED-------------G--TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAAL 157 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~-------------g--~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~ 157 (472)
|++.+.||+|+||.||+|.... + ..||||+++...... .+..+.
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~ 65 (295)
T cd05097 7 LRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKT---------------------ARNDFL 65 (295)
T ss_pred CeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHH---------------------HHHHHH
Confidence 5677999999999999997632 2 248999886432110 012345
Q ss_pred HHHHHHHHhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC--------------Ch----HHHHHHHHHHHH
Q 012042 158 KEFAFMKALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--------------NP----DSVFETIIGLVV 215 (472)
Q Consensus 158 rE~~~L~~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--------------~~----~~i~~qIl~aL~ 215 (472)
+|+.+|.++.|+++ +.+++. +..++||||++|++|..++... .+ ..++.+++.+|.
T Consensus 66 ~ei~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~ 143 (295)
T cd05097 66 KEIKIMSRLKNPNI--IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMK 143 (295)
T ss_pred HHHHHHHhCCCCCc--CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHH
Confidence 79999999998753 444432 6789999999999998865321 01 237889999999
Q ss_pred HHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheec
Q 012042 216 RLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDE 295 (472)
Q Consensus 216 ~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiyS 295 (472)
|||+.|++||||||.|||+++++.++|+|||.+......... ............++|+....+.++.++|+||
T Consensus 144 ~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 216 (295)
T cd05097 144 YLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY-------RIQGRAVLPIRWMAWESILLGKFTTASDVWA 216 (295)
T ss_pred HHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcce-------eccCcCcCceeecChhhhccCCcCchhhHHH
Confidence 999999999999999999999999999999998754221110 0000111111223455445677899999999
Q ss_pred cCchhhhhhhcc--CCc--c--hhh-----------------hhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 296 GSRLSFASISKT--AGF--L--DKE-----------------LAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 296 lG~~~f~~~t~~--~~~--l--~~~-----------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
||++++++++.. .+. + ... .....++..+.++|.+|++.+|++|||.++
T Consensus 217 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~ 288 (295)
T cd05097 217 FGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK 288 (295)
T ss_pred HHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 999999988732 111 0 000 012335678899999999999999999865
No 165
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.93 E-value=1.5e-25 Score=234.55 Aligned_cols=224 Identities=17% Similarity=0.073 Sum_probs=157.8
Q ss_pred eeeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-+.+++.||+|+||.||+|.+. .+..||||+++...... ....+.+|+.+|.+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~---------------------~~~~~~~Ei~~l~~ 96 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSS---------------------EKQALMSELKIMTH 96 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChH---------------------HHHHHHHHHHHHHh
Confidence 3567899999999999999862 13469999886432110 01235679999999
Q ss_pred hh-hCCCCcceeeec----CCceeEEeecCCCChhhhhccC---------------------------------------
Q 012042 166 LE-DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--------------------------------------- 201 (472)
Q Consensus 166 L~-~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--------------------------------------- 201 (472)
|. |++ +++.++. +..||||||++|++|.+++...
T Consensus 97 l~~Hpn--Iv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (400)
T cd05105 97 LGPHLN--IVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENK 174 (400)
T ss_pred cCCCCC--eeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccc
Confidence 96 654 3444432 5689999999999997754210
Q ss_pred -----------------------------------------------------------C----hHHHHHHHHHHHHHHH
Q 012042 202 -----------------------------------------------------------N----PDSVFETIIGLVVRLA 218 (472)
Q Consensus 202 -----------------------------------------------------------~----~~~i~~qIl~aL~~LH 218 (472)
. ...++.||+.+|.|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH 254 (400)
T cd05105 175 GDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA 254 (400)
T ss_pred ccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0136779999999999
Q ss_pred HCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCc
Q 012042 219 EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSR 298 (472)
Q Consensus 219 ~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~ 298 (472)
..||+||||||.|||++.++.++|+|||++......... ......+.....++|+.+....++.++||||||+
T Consensus 255 ~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGv 327 (400)
T cd05105 255 SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY-------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGI 327 (400)
T ss_pred hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHH
Confidence 999999999999999999999999999999765322110 0011112222234555555677899999999999
Q ss_pred hhhhhhh-ccCCcc----hhh-----------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 299 LSFASIS-KTAGFL----DKE-----------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 299 ~~f~~~t-~~~~~l----~~~-----------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+++++++ +..+.. +.. .....++.++.++|.+|+..+|++||+..+.
T Consensus 328 il~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 390 (400)
T cd05105 328 LLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHL 390 (400)
T ss_pred HHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHH
Confidence 9999886 432211 000 0124567889999999999999999997653
No 166
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.93 E-value=1.2e-25 Score=218.76 Aligned_cols=222 Identities=14% Similarity=0.187 Sum_probs=159.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.. .+|+.+|||.+.... ....+ ....+.+|+.++..+.|+++
T Consensus 4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~--~~~~~-----------------~~~~~~~e~~~l~~~~h~~i 64 (267)
T cd08229 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFD--LMDAK-----------------ARADCIKEIDLLKQLNHPNV 64 (267)
T ss_pred hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehh--hhhHH-----------------HHHHHHHHHHHHHHccCCch
Confidence 34568899999999999997 579999999775321 11000 11235579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.++. .+..+++|||++|++|..++.. ..+ ..++.+|+.+|.+||+.|++|+||||.||+++.+
T Consensus 65 --~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~ 142 (267)
T cd08229 65 --IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT 142 (267)
T ss_pred --hhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence 33332 2568999999999999886531 112 2368899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc----h-
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL----D- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l----~- 312 (472)
+.++|+|||.+....... .....+.+..+..+|+.+....++.++|+||||+++++++++..+.. +
T Consensus 143 ~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 213 (267)
T cd08229 143 GVVKLGDLGLGRFFSSKT---------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred CCEEECcchhhhccccCC---------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH
Confidence 999999999886442111 00111223333345554456778899999999999999998753321 0
Q ss_pred ----h--------hhhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 ----K--------ELAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 ----~--------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
. ......++.+++.+|.+|+..+|++||+..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 257 (267)
T cd08229 214 YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITY 257 (267)
T ss_pred HHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHH
Confidence 0 0112347789999999999999999999874
No 167
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.93 E-value=2e-25 Score=221.18 Aligned_cols=224 Identities=12% Similarity=0.056 Sum_probs=159.8
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||+|+||.||+|... ++..+++|.+.... ... ...+.+|+.++.++
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~--------------------~~~~~~e~~~l~~l 64 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAA--------------------RKDFQREAELLTNL 64 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHH--------------------HHHHHHHHHHHhcC
Confidence 456789999999999999752 34568899875322 110 12356799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC----------------------hHHHHHHHHHHHHHHHHC
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN----------------------PDSVFETIIGLVVRLAEH 220 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~----------------------~~~i~~qIl~aL~~LH~~ 220 (472)
.|+++ ..+++. ...++||||++|++|.+++.... ...++.+|+.++.+||++
T Consensus 65 ~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 142 (291)
T cd05094 65 QHEHI--VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ 142 (291)
T ss_pred CCCCc--ceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 88654 344432 56899999999999988763211 124788999999999999
Q ss_pred CceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchh
Q 012042 221 GLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLS 300 (472)
Q Consensus 221 GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~ 300 (472)
||+||||||.|||++.++.++|+|||.+.....+.... . . .........++|+......++.++|+||||+++
T Consensus 143 ~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~-~--~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 215 (291)
T cd05094 143 HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR-V--G----GHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 215 (291)
T ss_pred CeeecccCcceEEEccCCcEEECCCCcccccCCCceee-c--C----CCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence 99999999999999999999999999987543221100 0 0 001111223355544567789999999999999
Q ss_pred hhhhh-ccCCcc--hh------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 301 FASIS-KTAGFL--DK------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 301 f~~~t-~~~~~l--~~------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+++++ +..+.. .. ......++..+.++|.+|+..+|++||+.++-.+
T Consensus 216 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 216 WEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99988 554321 10 0012346788999999999999999999887544
No 168
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.93 E-value=1.2e-25 Score=220.82 Aligned_cols=222 Identities=14% Similarity=0.124 Sum_probs=156.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|.+ .+|..||||.++....... ....+.+|+.++.++.|+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 61 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG--------------------VPSTAIREISLLKELQHPNI 61 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCC--------------------chHHHHHHHHHHHhcCCCCE
Confidence 46678999999999999998 4699999998864321100 00124579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc-----CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-----QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-----~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+++++ .+..++||||++| +|..++.. ..+ ..++.||+.+|.|||+.||+||||||.|||++.++
T Consensus 62 --~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~ 138 (285)
T cd07861 62 --VCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG 138 (285)
T ss_pred --eeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC
Confidence 44443 2668999999985 56554321 111 23789999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+.....+... ...........+|+.+.+ ..++.++|+||||+++++++++.......
T Consensus 139 ~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~ 209 (285)
T cd07861 139 VIKLADFGLARAFGIPVRV---------YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID 209 (285)
T ss_pred cEEECcccceeecCCCccc---------ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 9999999998754322110 000111222334443332 45688999999999999999975322100
Q ss_pred --------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++.++.++|.+|+..+|.+||++.+-.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll 280 (285)
T cd07861 210 QLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280 (285)
T ss_pred HHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHh
Confidence 001134678888999999999999999987644
No 169
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.93 E-value=2.1e-25 Score=221.53 Aligned_cols=223 Identities=14% Similarity=0.104 Sum_probs=157.1
Q ss_pred eeecceecccCceeEEEEEeC-----------------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHH
Q 012042 93 TAVGRQLGVGKESDIFEVARE-----------------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLA 155 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-----------------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~ 155 (472)
|++.+.||+|+||.||+|... ++..||||+.+...... ....
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~---------------------~~~~ 65 (296)
T cd05095 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKN---------------------ARND 65 (296)
T ss_pred ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHH---------------------HHHH
Confidence 567899999999999998532 23468999876332110 0123
Q ss_pred HHHHHHHHHHhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC-----------------hHHHHHHHHHHH
Q 012042 156 ALKEFAFMKALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-----------------PDSVFETIIGLV 214 (472)
Q Consensus 156 a~rE~~~L~~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-----------------~~~i~~qIl~aL 214 (472)
+.+|+.+|.++.|+++ +.+++. +..+++|||++|++|..++.... ...++.+++.+|
T Consensus 66 ~~~E~~~l~~l~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05095 66 FLKEIKIMSRLKDPNI--IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGM 143 (296)
T ss_pred HHHHHHHHHhCCCCCc--ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHH
Confidence 4579999999988653 444432 66899999999999988753211 224788999999
Q ss_pred HHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchhee
Q 012042 215 VRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294 (472)
Q Consensus 215 ~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiy 294 (472)
.+||+.||+||||||.|||++.++.++|+|||.+..+....... ...+.......++|+....+.++.++|+|
T Consensus 144 ~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 144 KYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYR-------IQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred HHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCccee-------ccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 99999999999999999999999999999999987543221100 00011111223455544567789999999
Q ss_pred ccCchhhhhhhc--cCCc--ch-hh------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 295 EGSRLSFASISK--TAGF--LD-KE------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 295 SlG~~~f~~~t~--~~~~--l~-~~------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
|||++++++++. ..+. .. .. .....++..+.+++.+|++.+|++||+.++-
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i 290 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEI 290 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 999999999873 2111 00 00 0123466788999999999999999998764
No 170
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93 E-value=2.9e-25 Score=218.24 Aligned_cols=225 Identities=13% Similarity=0.013 Sum_probs=158.4
Q ss_pred eeecceecccCceeEEEEEe-CCCC----EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGT----VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~----~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+.+.+.||+|+||.||+|.+ .+|+ .||||+.+.....- ....+.+|+.++..+.
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~---------------------~~~~~~~e~~~l~~~~ 67 (279)
T cd05109 9 LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK---------------------ANKEILDEAYVMAGVG 67 (279)
T ss_pred eeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH---------------------HHHHHHHHHHHHHhcC
Confidence 45678999999999999986 4555 48999876322110 0113457888888888
Q ss_pred hCCCCcceeeec---CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.+++. ...+++|+|+++++|.+.+... .+ ..++.+++.+|.|||+.||+||||||.|||++++
T Consensus 68 ~~~i--~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~ 145 (279)
T cd05109 68 SPYV--CRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP 145 (279)
T ss_pred CCCC--ceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC
Confidence 7654 333332 4578999999999998875321 11 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCc--chh-
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGF--LDK- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~--l~~- 313 (472)
+.++|+|||.+........... .... -......+|+......++.++|+||||++++++++ +..+. ...
T Consensus 146 ~~~kL~dfG~~~~~~~~~~~~~------~~~~-~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 218 (279)
T cd05109 146 NHVKITDFGLARLLDIDETEYH------ADGG-KVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR 218 (279)
T ss_pred CcEEECCCCceeecccccceee------cCCC-ccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9999999999986643221100 0000 00112234554456778999999999999999887 43221 110
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+..+|.+|+..+|++||+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 219 EIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0012446788889999999999999999988754
No 171
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.93 E-value=7.1e-26 Score=222.34 Aligned_cols=222 Identities=11% Similarity=0.100 Sum_probs=161.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .++..||||++....... ....+.+|+.++.++.|+++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h~~i 64 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED---------------------EIEDIQQEITVLSQCDSPYI 64 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH---------------------HHHHHHHHHHHHHcCCCCcc
Confidence 44457899999999999988 468899999875322111 01234579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccCC-----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN-----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~-----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.+++ .+..++||||++|++|..++.... ...++.+++.++.+||+.|++|+||+|.||+++.++.++|
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l 142 (277)
T cd06642 65 --TRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKL 142 (277)
T ss_pred --HhhhcccccCCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEE
Confidence 33333 266899999999999988754321 1247889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h-
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E- 314 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~- 314 (472)
+|||.+......... ...+.+..+..+|+.+....++.++|+||||+.+++.+++..+..+. .
T Consensus 143 ~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 213 (277)
T cd06642 143 ADFGVAGQLTDTQIK---------RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 213 (277)
T ss_pred ccccccccccCcchh---------hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh
Confidence 999998755322110 01112233344555555667889999999999999999976432110 0
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.....++..+..+|.+|+..+|++||+..+-.
T Consensus 214 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06642 214 PKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELL 251 (277)
T ss_pred hcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 01124667889999999999999999987654
No 172
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.93 E-value=1.8e-25 Score=217.01 Aligned_cols=219 Identities=13% Similarity=0.041 Sum_probs=158.0
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|.+.++..+|||++..+.... ..+.+|+.++.++.|+++
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~-----------------------~~~~~e~~~l~~l~~~~i- 61 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-----------------------DDFIEEAKVMMKLSHPNL- 61 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCH-----------------------HHHHHHHHHHHhCCCCCE-
Confidence 45678999999999999988777789999875321110 123468999999987653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+..++. +..++||||++|++|.+++... .+ ..++.+++.++.+||+.||+||||||.||+++.++.++
T Consensus 62 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05059 62 -VQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVK 140 (256)
T ss_pred -EEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEE
Confidence 334332 5678999999999998875321 11 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCc--ch-----
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGF--LD----- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~--l~----- 312 (472)
|+|||.+.....+... ...... ..+.| +|+......++.++|+||||+++++.++ +..+. ..
T Consensus 141 l~dfg~~~~~~~~~~~--------~~~~~~-~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~ 211 (256)
T cd05059 141 VSDFGLARYVLDDQYT--------SSQGTK-FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV 211 (256)
T ss_pred ECCcccceeccccccc--------ccCCCC-CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH
Confidence 9999998754321110 000001 11234 4443456778999999999999999988 33221 00
Q ss_pred hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+ ....++.++.+++.+|+..+|++||+.++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~ 251 (256)
T cd05059 212 ESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKL 251 (256)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 001 123468889999999999999999998764
No 173
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.93 E-value=9.4e-26 Score=218.70 Aligned_cols=220 Identities=13% Similarity=0.104 Sum_probs=159.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||.|+||.||+|.+.++..+|+|++....... ...+.+|+.+|..+.|+++
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~----------------------~~~~~~e~~~l~~l~~~~i- 64 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK----------------------QQDFQKEVQALKRLRHKHL- 64 (261)
T ss_pred HHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhh----------------------HHHHHHHHHHHhcCCCcch-
Confidence 55678999999999999999778999999876332100 1124578999999987653
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC-----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++ ....++||||++|++|.+++... . ...++.+|+.+|.+||+.||+||||+|.||+++.++.+
T Consensus 65 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~ 143 (261)
T cd05148 65 -ISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVC 143 (261)
T ss_pred -hheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceE
Confidence 33333 25679999999999998876421 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc--h-h--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL--D-K-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l--~-~-- 313 (472)
+|+|||.+.....+.. ...... ..+.+ +|+......++.++|+||||++++++++ +..+.. . .
T Consensus 144 kl~d~g~~~~~~~~~~---------~~~~~~-~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~ 213 (261)
T cd05148 144 KVADFGLARLIKEDVY---------LSSDKK-IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV 213 (261)
T ss_pred EEccccchhhcCCccc---------cccCCC-CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 9999999875432211 000111 12333 4444455778899999999999999987 432211 0 0
Q ss_pred --hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ .....+..+.++|.+|+..+|++|||..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~ 255 (261)
T cd05148 214 YDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALR 255 (261)
T ss_pred HHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 00 1245678899999999999999999987654
No 174
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.93 E-value=2.1e-25 Score=220.67 Aligned_cols=221 Identities=12% Similarity=0.052 Sum_probs=158.3
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||.|+||.||++... ++..+|||.++...... ...+.+|+.+|.++
T Consensus 7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~----------------------~~~~~~e~~~l~~l 64 (288)
T cd05093 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA----------------------RKDFHREAELLTNL 64 (288)
T ss_pred eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHH----------------------HHHHHHHHHHHHhC
Confidence 566789999999999999752 34568999875322111 11345799999999
Q ss_pred hhCCCCcceeee----cCCceeEEeecCCCChhhhhccC---------------Ch----HHHHHHHHHHHHHHHHCCce
Q 012042 167 EDHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---------------NP----DSVFETIIGLVVRLAEHGLI 223 (472)
Q Consensus 167 ~~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---------------~~----~~i~~qIl~aL~~LH~~GII 223 (472)
.|+++ +.+++ .+..++||||++|++|..++... .+ ..++.+++.+|.+||++|++
T Consensus 65 ~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~ 142 (288)
T cd05093 65 QHEHI--VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFV 142 (288)
T ss_pred CCCCc--ceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 88764 33333 26789999999999998765311 11 23788999999999999999
Q ss_pred eccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccc-cccccccccCCCCcchheeccCchhhh
Q 012042 224 HCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRF-HLNFQETTDGDDGSDIDTDEGSRLSFA 302 (472)
Q Consensus 224 HrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y-~~~~~~~~~~~~~~~sDiySlG~~~f~ 302 (472)
||||||.|||+++++.++|+|||.+........ ........... .++|+......++.++|+||||+.+++
T Consensus 143 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~ 214 (288)
T cd05093 143 HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY--------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 214 (288)
T ss_pred ecccCcceEEEccCCcEEeccCCccccccCCce--------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 999999999999999999999999875422110 00000011112 235554556788999999999999999
Q ss_pred hhh-ccCCcch--h-----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 303 SIS-KTAGFLD--K-----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 303 ~~t-~~~~~l~--~-----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+++ +..+... . . .....++..+.++|.+|++.+|.+|||.++.
T Consensus 215 l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v 272 (288)
T cd05093 215 IFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEI 272 (288)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 998 5432210 0 0 1123577899999999999999999998875
No 175
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.93 E-value=3.3e-25 Score=224.92 Aligned_cols=227 Identities=14% Similarity=0.155 Sum_probs=156.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||++.. .+++.||||+++... .. + + .....+.+|..++..+.|+++
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~--~--~-------------~~~~~~~~e~~~l~~~~~~~i 63 (331)
T cd05597 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE--ML--K--R-------------AETACFREERDVLVNGDRRWI 63 (331)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--Hh--h--h-------------hhHHHHHHHHHHHHhCCCCCC
Confidence 56789999999999999998 468999999985210 00 0 0 001234568888888887654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++. .+..|+||||++|++|..++.. ..+ ..++.||+.+|.|||++||+||||||.|||++.++.+
T Consensus 64 --~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~ 141 (331)
T cd05597 64 --TNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHI 141 (331)
T ss_pred --CceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCE
Confidence 33332 2568999999999999887632 122 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
+|+|||++.......... .....+....++|+.+. ...++.++|+||||+++++++++..+....
T Consensus 142 kl~Dfg~~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 142 RLADFGSCLRLLADGTVQ--------SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred EEEECCceeecCCCCCcc--------ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 999999987543211100 00112222333454432 245788999999999999999976432110
Q ss_pred -----hh-----------hccCCCHHHHHHHHHHHhcCcc--cCCCCCCCCCC
Q 012042 314 -----EL-----------AASGFTRKDQDVIQKFIGGSIE--ESGSDDEGSDD 348 (472)
Q Consensus 314 -----~~-----------~~~~~s~~~~~~l~k~l~~~p~--~R~s~~e~~~~ 348 (472)
.+ ....++..++.+|.+|+...++ .|++.++...-
T Consensus 214 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 214 VETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 01 0123688889999999865333 36666655553
No 176
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.93 E-value=4.1e-25 Score=218.89 Aligned_cols=218 Identities=15% Similarity=0.180 Sum_probs=160.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||++.+ .+++.||||++.... ....+ ....+.+|+.+|.++.|+++
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~-----------------~~~~~~~e~~~l~~l~h~~i 63 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK--IVKLK-----------------QVEHVLNEKRILQSIRHPFL 63 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH--hhhhh-----------------HHHHHHHHHHHHHhCCCCCc
Confidence 56679999999999999998 468999999885321 00000 01235679999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|...+... .+ ..++.+|+.+|.+||+.||+||||+|.|||++.++.++
T Consensus 64 --~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~k 141 (290)
T cd05580 64 --VNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIK 141 (290)
T ss_pred --cceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEE
Confidence 444432 5678999999999998875322 12 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--h-----hh
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--D-----KE 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~-----~~ 314 (472)
|+|||++....+.. ....+....++|+.+.....+.++|+||||+++++++++..+.. + ..
T Consensus 142 l~dfg~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 209 (290)
T cd05580 142 ITDFGFAKRVKGRT------------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEK 209 (290)
T ss_pred EeeCCCccccCCCC------------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99999987653320 11122223345555555678889999999999999999764321 1 00
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
+ .+..++..++++|.+|+..+|.+|+++.
T Consensus 210 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~ 244 (290)
T cd05580 210 ILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNL 244 (290)
T ss_pred HhcCCccCCccCCHHHHHHHHHHccCCHHHccCcc
Confidence 0 1245788899999999999999999654
No 177
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.93 E-value=1.4e-25 Score=228.81 Aligned_cols=223 Identities=16% Similarity=0.116 Sum_probs=156.4
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|++.+.||.|+||.||+|... +++.||||+++.... ... ...+.+|+.++.++
T Consensus 9 ~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~--------------------~~~~~~E~~~~~~l 67 (337)
T cd05054 9 LKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASE--------------------YKALMTELKILIHI 67 (337)
T ss_pred hhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHH--------------------HHHHHHHHHHHHhh
Confidence 567899999999999999642 357899998863221 110 01245799999999
Q ss_pred -hhCCCCcceeeec-----CCceeEEeecCCCChhhhhccC---------------------------------------
Q 012042 167 -EDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ--------------------------------------- 201 (472)
Q Consensus 167 -~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~--------------------------------------- 201 (472)
.|+++ +..++. ...+++|||++|++|..++...
T Consensus 68 ~~h~ni--v~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (337)
T cd05054 68 GHHLNV--VNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASS 145 (337)
T ss_pred ccCcch--hheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccccc
Confidence 45443 333321 4578999999999998764210
Q ss_pred ------------------------C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCc
Q 012042 202 ------------------------N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSH 253 (472)
Q Consensus 202 ------------------------~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~ 253 (472)
. ...++.+|+.+|.|||+.||+||||||.|||++.++.++|+|||++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~ 225 (337)
T cd05054 146 GFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 225 (337)
T ss_pred ccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhccc
Confidence 0 123678999999999999999999999999999999999999999976532
Q ss_pred ccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc----hh----h-------hh
Q 012042 254 QNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL----DK----E-------LA 316 (472)
Q Consensus 254 p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l----~~----~-------~~ 316 (472)
... ..... . ......| +|+......++.++|+||||++++++++ +..+.. +. . ..
T Consensus 226 ~~~--~~~~~-----~-~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 297 (337)
T cd05054 226 DPD--YVRKG-----D-ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA 297 (337)
T ss_pred Ccc--hhhcc-----C-CCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC
Confidence 211 00000 0 1112233 4444456789999999999999999887 543221 00 0 01
Q ss_pred ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 317 ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 317 ~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
...++.++..++.+|+..+|++||++++-.
T Consensus 298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell 327 (337)
T cd05054 298 PEYATPEIYSIMLDCWHNNPEDRPTFSELV 327 (337)
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 234677889999999999999999988753
No 178
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93 E-value=3.2e-25 Score=214.35 Aligned_cols=223 Identities=14% Similarity=0.151 Sum_probs=162.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||++.. .+|+.||||.+........ ....+.+|+.+++++.|+++
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 61 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPK--------------------EREESRKEVAVLSNMKHPNI 61 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChH--------------------HHHHHHHHHHHHHhCCCCCe
Confidence 56779999999999999998 4689999998753211111 01235679999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.+++. +..++||||++|++|...+... .+ ..++.+++.++.+||++|++|+||+|.|||++.++.
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~ 139 (256)
T cd08218 62 --VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 139 (256)
T ss_pred --eeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC
Confidence 344432 6789999999999998765321 12 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
++|+|||.+......... .....+.....+|+.......+.++|+||||+++++++++.......
T Consensus 140 ~~l~d~~~~~~~~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~ 210 (256)
T cd08218 140 IKLGDFGIARVLNSTVEL---------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLV 210 (256)
T ss_pred EEEeeccceeecCcchhh---------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHH
Confidence 999999998755332110 01112222233455445677889999999999999999975432100
Q ss_pred -h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .....++.++..+|.+|+..+|.+||+..+-.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl 251 (256)
T cd08218 211 LKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSIL 251 (256)
T ss_pred HHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence 0 01245678899999999999999999987643
No 179
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.93 E-value=3.5e-25 Score=214.12 Aligned_cols=223 Identities=16% Similarity=0.134 Sum_probs=162.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|+||.||.+.. .+++.+++|.+.....+... ...+.+|+.+|+++.|+++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~--------------------~~~~~~e~~~l~~~~h~~i 61 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKE--------------------RRDALNEIVILSLLQHPNI 61 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhH--------------------HHHHHHHHHHHHhCCCCCe
Confidence 56789999999999999988 56899999987533211111 1134579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
..+++ .+..+++|||++|++|.+.+... .+ ..++.+++.+|.+||+.|++||||+|.||+++.++.
T Consensus 62 --~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~ 139 (256)
T cd08221 62 --IAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGL 139 (256)
T ss_pred --eEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCC
Confidence 33333 26689999999999999876432 11 247789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----h--
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----K-- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~-- 313 (472)
++|+|||.+.....+.. ......+.....+|+...+...+.++|+||||+++++++++...... .
T Consensus 140 ~kl~d~~~~~~~~~~~~---------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~ 210 (256)
T cd08221 140 IKLGDFGISKILGSEYS---------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLV 210 (256)
T ss_pred EEECcCcceEEcccccc---------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 99999999876543221 11112223333455544455678899999999999999886432110 0
Q ss_pred -hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ ....++.++..+|.+|+..+|++||+..+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll 251 (256)
T cd08221 211 VKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVL 251 (256)
T ss_pred HHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 00 1245788899999999999999999987653
No 180
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.93 E-value=1.4e-25 Score=224.07 Aligned_cols=227 Identities=15% Similarity=0.160 Sum_probs=160.2
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.+.||+|.||.||+|+. .+|+.||+|.++.....- + ....+.+|+.+|++|.|.+- +-
T Consensus 16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~E-----------G---------~P~taiREisllk~L~~~~~-iv 74 (323)
T KOG0594|consen 16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE-----------G---------VPSTAIREISLLKRLSHANH-IV 74 (323)
T ss_pred HHHhCCCCceEEEEEEEecCCCEEEEEEEecccccc-----------C---------CCchhhHHHHHHHHhCCCcc-eE
Confidence 46799999999999999 579999999998653210 0 01135689999999998751 22
Q ss_pred eeeec----C------CceeEEeecCCCChhhhhccC----------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 175 NAVDC----N------RHCVIMSLVQGYPLVQVNQLQ----------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 175 ~~i~~----~------~~~LVMEyi~G~~L~~l~~~~----------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
.+.+. + ..++||||++ .+|..++... ....++.||+.+|.|||++||+||||||.||||
T Consensus 75 ~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi 153 (323)
T KOG0594|consen 75 RLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI 153 (323)
T ss_pred EEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE
Confidence 22221 3 6789999996 4555554321 134589999999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcc--
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFL-- 311 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l-- 311 (472)
++.|.+||+|||+|+....|.-. +.+++ .+-.+-+|+... ...|+...|+||+|+++.++.++.+-+.
T Consensus 154 ~~~G~lKlaDFGlAra~~ip~~~--yt~ev-------vTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~ 224 (323)
T KOG0594|consen 154 SSSGVLKLADFGLARAFSIPMRT--YTPEV-------VTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGD 224 (323)
T ss_pred CCCCcEeeeccchHHHhcCCccc--ccccE-------EEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCC
Confidence 99999999999999976655321 11111 111222455443 4579999999999999988887543110
Q ss_pred -------------------hhhh----------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCCC
Q 012042 312 -------------------DKEL----------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDGN 350 (472)
Q Consensus 312 -------------------~~~~----------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~~ 350 (472)
.|.. .....+..-.+++.+||+.+|.+|.|+....+...
T Consensus 225 se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~y 304 (323)
T KOG0594|consen 225 SEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPY 304 (323)
T ss_pred cHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChh
Confidence 0000 00112224568999999999999999999988765
Q ss_pred Ccc
Q 012042 351 ESE 353 (472)
Q Consensus 351 ~~~ 353 (472)
+++
T Consensus 305 f~~ 307 (323)
T KOG0594|consen 305 FSE 307 (323)
T ss_pred hcc
Confidence 533
No 181
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.93 E-value=1.2e-25 Score=216.73 Aligned_cols=225 Identities=14% Similarity=0.180 Sum_probs=161.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|...+.||+|.||.||+|++ .+|+.||||.++.+...- . ....+.||+..|+.++|.+|
T Consensus 4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-G-------------------i~~talREIK~Lqel~h~nI 63 (318)
T KOG0659|consen 4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-G-------------------INRTALREIKLLQELKHPNI 63 (318)
T ss_pred hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-C-------------------ccHHHHHHHHHHHHccCcch
Confidence 33457899999999999999 689999999988663110 0 11257799999999998542
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
-.+++. ...-||+||++ .+|..++... ....++.+++.++.|||++.|+||||||.|+||+++|.+
T Consensus 64 --i~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~l 140 (318)
T KOG0659|consen 64 --IELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQL 140 (318)
T ss_pred --hhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcE
Confidence 223332 66789999997 4565554322 234588999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccC---C--cchh-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTA---G--FLDK- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~---~--~l~~- 313 (472)
||+|||+|+....|+-.. ....+. +++-+|+.. ....|+...|+||.||++-|++-+.+ + .+++
T Consensus 141 KiADFGLAr~f~~p~~~~--------~~~V~T-RWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 141 KIADFGLARFFGSPNRIQ--------THQVVT-RWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred EeecccchhccCCCCccc--------ccceee-eeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 999999999876654321 111222 333345543 56889999999999988877665421 0 0000
Q ss_pred -------------------------hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -------------------------EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -------------------------~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+ .-+..+...-+++.+|+..||.+|.++++-++..
T Consensus 212 ~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 212 SKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred HHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 00 0122344556899999999999999999988866
No 182
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.93 E-value=2.3e-25 Score=218.69 Aligned_cols=224 Identities=15% Similarity=0.070 Sum_probs=156.6
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|++.+.||+|+||.||+|.+. ++..||||.+....... ....+.+|+.++..+
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~---------------------~~~~~~~e~~~l~~l 66 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMR---------------------ERIEFLNEASVMKEF 66 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHH---------------------HHHHHHHHHHHHHhC
Confidence 567899999999999999752 35679999875321100 011345789999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------C---hHHHHHHHHHHHHHHHHCCceecc
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------N---PDSVFETIIGLVVRLAEHGLIHCD 226 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------~---~~~i~~qIl~aL~~LH~~GIIHrD 226 (472)
.|+++ +.+++. +..++||||++|++|..++... . ...++.+++.+|.|||+.|++|||
T Consensus 67 ~~~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~d 144 (277)
T cd05062 67 NCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRD 144 (277)
T ss_pred CCCCe--eeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 87653 333332 5689999999999998875321 0 123678999999999999999999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
|||.||+++.++.++|+|||.+......... ...... .....+++|+.+....++.++|+||||++++++++.
T Consensus 145 lkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~----~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 217 (277)
T cd05062 145 LAARNCMVAEDFTVKIGDFGMTRDIYETDYY---RKGGKG----LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 217 (277)
T ss_pred cchheEEEcCCCCEEECCCCCccccCCccee---ecCCCC----ccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcC
Confidence 9999999999999999999998654321110 000000 001122355555567789999999999999999883
Q ss_pred -cCCcc--h--h----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 307 -TAGFL--D--K----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 307 -~~~~l--~--~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+.. . . .......+..+..+|.+|+..+|++|||..|..
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 272 (277)
T cd05062 218 AEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 272 (277)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 32211 0 0 011234667889999999999999999987643
No 183
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93 E-value=5.8e-25 Score=219.61 Aligned_cols=231 Identities=13% Similarity=0.130 Sum_probs=159.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||++.+ .+++.||||.+......... ....+.+|+.++..+.|+++
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~-------------------~~~~~~~e~~~l~~~~~~~i 63 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRN-------------------QIQQVFVERDILTFAENPFV 63 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHH-------------------HHHHHHHHHHHHHhCCCCCe
Confidence 45678999999999999998 46899999987533110000 01134578999999988654
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|..++... .+ ..++.+++.++.|||+.||+||||||.||+++.++.++
T Consensus 64 --~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~ 141 (305)
T cd05609 64 --VSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIK 141 (305)
T ss_pred --eeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEE
Confidence 444432 4568999999999998876422 12 24678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhc----cccch-h-hhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---
Q 012042 242 MIDFPQMVSVSHQNAQMYFD----RDVEC-I-FKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~----rD~~~-i-~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--- 312 (472)
|+|||.+....-+....... .+... . ..+.+...+.+|+......++.++|+||||+++++++++..+...
T Consensus 142 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~ 221 (305)
T cd05609 142 LTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 221 (305)
T ss_pred EeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999886321111111100 00000 0 011222223345544567789999999999999999997643211
Q ss_pred -----hhh--------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 -----KEL--------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 -----~~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
... ....++..+..+|.+|+..+|++||+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 266 (305)
T cd05609 222 EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGG 266 (305)
T ss_pred HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccC
Confidence 000 01247888999999999999999999753
No 184
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.93 E-value=3.7e-25 Score=215.30 Aligned_cols=221 Identities=14% Similarity=0.112 Sum_probs=158.7
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|....+..+|||....+... ...+.+|+.++.++.|.++.
T Consensus 8 ~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~-----------------------~~~~~~e~~~l~~l~~~~i~ 64 (260)
T cd05073 8 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-----------------------VEAFLAEANVMKTLQHDKLV 64 (260)
T ss_pred eeEEeEecCccceEEEEEEecCCccEEEEecCCChhH-----------------------HHHHHHHHHHHHhcCCCCcc
Confidence 5678999999999999998777778999987532110 11345799999999886632
Q ss_pred cc-eeeecCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 173 VP-NAVDCNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 173 vP-~~i~~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
.. ..+.....+++|||++|++|.+++... .+ ..++.+++.+|.+||+.|++|+||||.||+++.++.++|+
T Consensus 65 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~ 144 (260)
T cd05073 65 KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIA 144 (260)
T ss_pred eEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEEC
Confidence 21 222236679999999999998876421 11 2377899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc--hh-h----
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL--DK-E---- 314 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l--~~-~---- 314 (472)
|||.+.......... . ......+.| +|+......++.++|+||||+.+++.++ +..+.. +. .
T Consensus 145 d~~~~~~~~~~~~~~--------~-~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05073 145 DFGLARVIEDNEYTA--------R-EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 215 (260)
T ss_pred CCcceeeccCCCccc--------c-cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999987553221100 0 001112334 4444455678999999999999999998 543211 00 0
Q ss_pred -------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 -------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 -------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.....++.++..++.+|+..+|++||+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l 253 (260)
T cd05073 216 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYI 253 (260)
T ss_pred HhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHH
Confidence 0123467789999999999999999997653
No 185
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.93 E-value=3.6e-25 Score=224.68 Aligned_cols=216 Identities=13% Similarity=0.122 Sum_probs=149.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||++.+ .+++.||||++.... ... . .....+..|..++..+.|+++
T Consensus 3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~----~-------------~~~~~~~~e~~~l~~~~~~~i 63 (331)
T cd05624 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE--MLK----R-------------AETACFREERNVLVNGDCQWI 63 (331)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH--HHh----h-------------HHHHHHHHHHHHHHhCCCCCE
Confidence 56789999999999999998 468999999875210 000 0 001124567888888776543
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++. .+..||||||++|++|..++.. ..+ ..++.|++.+|.+||++||+||||||.|||++.++.+
T Consensus 64 --~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~ 141 (331)
T cd05624 64 --TTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHI 141 (331)
T ss_pred --eeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCE
Confidence 33322 2668999999999999987642 112 2367899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-----CCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-----GDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-----~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
+|+|||++......... ......+....++|+.+.. +.++.++|+||||+++|+++++..+....
T Consensus 142 kl~DfG~a~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 142 RLADFGSCLKMNQDGTV--------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred EEEeccceeeccCCCce--------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 99999999765322110 0001122222334554322 46788999999999999999986432110
Q ss_pred -----hhh-----------ccCCCHHHHHHHHHHHhcCcc
Q 012042 314 -----ELA-----------ASGFTRKDQDVIQKFIGGSIE 337 (472)
Q Consensus 314 -----~~~-----------~~~~s~~~~~~l~k~l~~~p~ 337 (472)
.+. ...++.+.+++|.+|+...+.
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~ 253 (331)
T cd05624 214 VETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRER 253 (331)
T ss_pred HHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchh
Confidence 000 123577888999999986543
No 186
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.93 E-value=1.4e-25 Score=220.52 Aligned_cols=223 Identities=13% Similarity=0.143 Sum_probs=155.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .+|+.||+|.++.....-. ....+.+|+.++.++.|+++
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~--------------------~~~~~~~ei~~l~~l~h~~i 61 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG--------------------VPSSALREICLLKELKHKNI 61 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccccc--------------------CccchhHHHHHHHhcCCCCe
Confidence 45678899999999999998 4799999998864311000 00123469999999987643
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc-C--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-Q--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
...++ .+..+++|||++| +|...+.. . .+ ..++.||+.+|.+||..||+||||||.||+++.++.+
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~ 138 (284)
T cd07839 62 --VRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGEL 138 (284)
T ss_pred --eeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcE
Confidence 33222 2668999999986 55544321 1 11 3478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcch-----h-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLD-----K- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~- 313 (472)
+|+|||.+.....+.. ............+|+.+.+ ..++.++|+||||+++++++++..+... .
T Consensus 139 ~l~dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~ 209 (284)
T cd07839 139 KLADFGLARAFGIPVR---------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 209 (284)
T ss_pred EECccchhhccCCCCC---------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH
Confidence 9999999875432211 1111122222334444333 4468999999999999999986432100 0
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++.++.++|.+|+..+|.+|||+++...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 210 LKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0001246778889999999999999999876543
No 187
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93 E-value=3.4e-25 Score=214.80 Aligned_cols=214 Identities=14% Similarity=0.069 Sum_probs=155.4
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||++... |..||+|..+.... ...+.+|+.++.++.|+++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~------------------------~~~~~~e~~~l~~l~~~~i- 61 (256)
T cd05082 8 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT------------------------AQAFLAEASVMTQLRHSNL- 61 (256)
T ss_pred CeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCch------------------------HHHHHHHHHHHHhCCCCCe-
Confidence 456789999999999999764 78899998753211 0123468999999988653
Q ss_pred cceeee-----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 173 VPNAVD-----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 173 vP~~i~-----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
...++ .+..+++|||++|++|..++... .+ ..++.+++.+|.+||++||+||||||.||++++++.
T Consensus 62 -~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~ 140 (256)
T cd05082 62 -VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNV 140 (256)
T ss_pred -eeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCc
Confidence 33222 14579999999999998875321 11 247789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcc----hh-
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL----DK- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l----~~- 313 (472)
++|+|||.+........ .........+|+.+....++.++|+||||++++++.+ +..+.. ..
T Consensus 141 ~kl~dfg~~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~ 208 (256)
T cd05082 141 AKVSDFGLTKEASSTQD------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV 208 (256)
T ss_pred EEecCCccceeccccCC------------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999875432110 0001112234554456778999999999999999987 432211 00
Q ss_pred --hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 --EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 --~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ .....+..+.++|.+|+..+|++||+..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 249 (256)
T cd05082 209 VPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQL 249 (256)
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00 123467889999999999999999998764
No 188
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93 E-value=3.1e-25 Score=218.10 Aligned_cols=222 Identities=12% Similarity=0.161 Sum_probs=157.4
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-h
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-D 168 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~ 168 (472)
-.|++.+.||.|+||.||+|.+ .+++.||+|+........ ..+..|+.++.++. |
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~-----------------------~~~~~e~~~l~~~~~h 72 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE-----------------------EEIKLEINMLKKYSHH 72 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHH-----------------------HHHHHHHHHHHHhcCC
Confidence 3567778999999999999998 568999999875331111 12346888888884 4
Q ss_pred CCCCcceeeec----------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 169 HGFPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 169 ~gi~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
.++ .+.++. ...|++|||+++++|..++... .+ ..++.||+.+|.|||+.||+|+||+|.
T Consensus 73 ~~i--~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~ 150 (282)
T cd06636 73 RNI--ATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQ 150 (282)
T ss_pred CcE--EEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence 332 222221 3468999999999998875321 12 236789999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhh
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t 305 (472)
||+++.++.++|+|||.+.....+... ...+.+...+.+|+.+. ...++.++|+||||++++++++
T Consensus 151 nili~~~~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~ 221 (282)
T cd06636 151 NVLLTENAEVKLVDFGVSAQLDRTVGR---------RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE 221 (282)
T ss_pred HEEECCCCCEEEeeCcchhhhhccccC---------CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHh
Confidence 999999999999999998754322110 01111222223444322 3457889999999999999999
Q ss_pred ccCCcchh---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 306 KTAGFLDK---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 306 ~~~~~l~~---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+..+..+. .+....++..+.++|.+|+..+|.+||++.+..
T Consensus 222 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 222 GAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred CCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 76432110 111235788999999999999999999987654
No 189
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=3.2e-25 Score=214.68 Aligned_cols=215 Identities=17% Similarity=0.110 Sum_probs=157.5
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||++.. +++.||+|.++.... ...+.+|+.++.++.|+++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~------------------------~~~~~~e~~~l~~~~~~~i- 61 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT------------------------AQAFLEETAVMTKLHHKNL- 61 (254)
T ss_pred ceeeeeeccCCCCceEeccc-CCCceEEEeecCcch------------------------HHHHHHHHHHHHhCCCCCc-
Confidence 56789999999999999864 678899998753210 1134579999999988764
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+..++ .+..+++|||++|++|.+++... .+ ..++.+++.++.+||+.|++||||||.||+++.++.++
T Consensus 62 -~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~k 140 (254)
T cd05083 62 -VRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAK 140 (254)
T ss_pred -CeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEE
Confidence 33332 36679999999999998875421 11 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcchh------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLDK------ 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~~------ 313 (472)
|+|||.+........ .......| +|+......++.++|+||||+.++++++ +..+....
T Consensus 141 l~Dfg~~~~~~~~~~-------------~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 207 (254)
T cd05083 141 VSDFGLARVGSMGVD-------------NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK 207 (254)
T ss_pred ECCCccceeccccCC-------------CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH
Confidence 999999864321100 01111233 4443455778899999999999999887 44321100
Q ss_pred h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++..+.++|.+|+..+|++||+..+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 208 ECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 012356788899999999999999999877543
No 190
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93 E-value=5e-25 Score=215.23 Aligned_cols=232 Identities=13% Similarity=0.109 Sum_probs=161.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.. .+|+.||||.++.........+ .........+.+|+.++.++.|+++
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~------------~~~~~~~~~~~~e~~~l~~l~h~~i 70 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHD------------SRQKDMVKALRSEIETLKDLDHLNI 70 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccc------------hHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 56678999999999999988 4699999998864322111100 0011112345679999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccCC------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|...+.... ...++.+|+.+|.+||+.|++||||+|.||+++.++.++
T Consensus 71 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~ 148 (272)
T cd06629 71 --VQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICK 148 (272)
T ss_pred --ceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEE
Confidence 444442 67899999999999988754321 123678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccC--CCCcchheeccCchhhhhhhccCCcchh------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG--DDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~--~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
|+|||.+.......... ......+.....+|+..... .++.++|+||||+++++.+++..+....
T Consensus 149 l~d~~~~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 221 (272)
T cd06629 149 ISDFGISKKSDDIYDND-------QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM 221 (272)
T ss_pred Eeecccccccccccccc-------ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH
Confidence 99999987543211100 00111122222344433332 3788999999999999999975432110
Q ss_pred -hh------------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -EL------------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -~~------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ ....++..+.++|.+|+..+|++||+.++-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 266 (272)
T cd06629 222 FKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTAREL 266 (272)
T ss_pred HHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 00 012457889999999999999999997653
No 191
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.93 E-value=3.5e-25 Score=221.95 Aligned_cols=223 Identities=17% Similarity=0.147 Sum_probs=162.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||++.+ .+|..+|+|......... ....+.+|+.++.++.|+++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i 61 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPA---------------------IRNQIIRELKVLHECNSPYI 61 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHH---------------------HHHHHHHHHHHHHhCCCCCC
Confidence 56778999999999999998 468899999875321100 01235579999999988753
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++ .+..++||||++|++|..++... .+ ..++.+++.+|.|||+ +||+||||||.|||++.++.+
T Consensus 62 --v~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~ 139 (308)
T cd06615 62 --VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEI 139 (308)
T ss_pred --CeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcE
Confidence 33332 37789999999999998876432 12 2578899999999997 699999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------h
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------K 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~ 313 (472)
+|+|||.+....+... ..+.+.....+|+.+.+..++.++|+||||+++++++++..+... .
T Consensus 140 ~l~dfg~~~~~~~~~~-----------~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~ 208 (308)
T cd06615 140 KLCDFGVSGQLIDSMA-----------NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEA 208 (308)
T ss_pred EEccCCCccccccccc-----------ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHH
Confidence 9999999865432211 112222233345544556788999999999999999987533210 0
Q ss_pred --------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 --------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 --------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+....++.++.++|.+|+..+|++||+..+-....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 209 MFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred hhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000012677889999999999999999998776543
No 192
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93 E-value=2.6e-25 Score=217.78 Aligned_cols=225 Identities=14% Similarity=0.150 Sum_probs=164.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++...||.|++|.||+|.+. +++.||||++..... ... ...+.+|+.+++.+.|+++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~--------------------~~~~~~e~~~l~~l~h~~i 61 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDE--------------------IEDIQQEIQFLSQCRSPYI 61 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chH--------------------HHHHHHHHHHHHHcCCCCe
Confidence 455688999999999999984 689999998864321 100 0124579999999988654
Q ss_pred Cccee--eecCCceeEEeecCCCChhhhhccC-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 172 PVPNA--VDCNRHCVIMSLVQGYPLVQVNQLQ-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 172 ~vP~~--i~~~~~~LVMEyi~G~~L~~l~~~~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
..+.. ......++||||++|++|..++... .+ ..++.+++.++.+||..|++||||+|.||+++.++.++|+|
T Consensus 62 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d 141 (274)
T cd06609 62 TKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLAD 141 (274)
T ss_pred eeeeEEEEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcc
Confidence 22211 1236689999999999998876532 11 24788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----h------
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-----K------ 313 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~------ 313 (472)
||++.....+.. ....+.+.....+|+......++.++|+||||+++++++++..+... .
T Consensus 142 ~g~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~ 212 (274)
T cd06609 142 FGVSGQLTSTMS---------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK 212 (274)
T ss_pred cccceeeccccc---------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh
Confidence 999987653311 01112222233455544556689999999999999999997543210 0
Q ss_pred ----hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+...+++..+.++|.+|+..+|++||+.++-..
T Consensus 213 ~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 213 NNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred cCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0111237888999999999999999999877655
No 193
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.93 E-value=4.9e-25 Score=213.40 Aligned_cols=214 Identities=15% Similarity=0.116 Sum_probs=157.7
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||.|++|.||+|... |+.||||.++.... . ...+.+|+.++.++.|+++
T Consensus 8 ~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~--------------------~~~~~~e~~~l~~l~~~~i- 62 (256)
T cd05039 8 LKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---A--------------------AQAFLAEASVMTTLRHPNL- 62 (256)
T ss_pred ccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---H--------------------HHHHHHHHHHHHhcCCcce-
Confidence 456789999999999999875 78999998864321 0 1134579999999988654
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccCC--------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN--------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~--------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++ .+..++||||+++++|.+++.... ...++.+++.++.+||.+||+||||||.||+++.++.+
T Consensus 63 -~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~ 141 (256)
T cd05039 63 -VQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVA 141 (256)
T ss_pred -eeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCE
Confidence 23332 367899999999999988753221 13478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCc--ch-h--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGF--LD-K-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~--l~-~-- 313 (472)
+|+|||.+........ . .....++ +|+....+.++.++|+||||+++++..+ +..+. .. .
T Consensus 142 ~l~d~g~~~~~~~~~~-----------~--~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 208 (256)
T cd05039 142 KVSDFGLAKEASQGQD-----------S--GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV 208 (256)
T ss_pred EEcccccccccccccc-----------c--CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 9999999875422111 0 0112233 4444456778899999999999999886 43221 00 0
Q ss_pred --h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 --E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 --~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .....++..+.++|.+|+..+|++||+.++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l 249 (256)
T cd05039 209 VPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQL 249 (256)
T ss_pred HHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 0 0123567889999999999999999998764
No 194
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93 E-value=3.1e-25 Score=213.80 Aligned_cols=224 Identities=16% Similarity=0.158 Sum_probs=160.1
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
...+.||+|++|.||+|... +++.|+||.+......... ......+.+|+.++.++.|+++
T Consensus 3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~-----------------~~~~~~~~~e~~~l~~~~h~~i- 64 (258)
T cd06632 3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTG-----------------QEAVKQLEQEIALLSKLQHPNI- 64 (258)
T ss_pred cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccc-----------------hHHHHHHHHHHHHHHhcCCCCc-
Confidence 45688999999999999985 7999999988643211100 0001234579999999988653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccCC--h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN--P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~--~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
++.++. ...+++|||++|++|..++.... + ..++.+|+.++.+||+.||+|+||+|.||+++.++.++|
T Consensus 65 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl 143 (258)
T cd06632 65 -VQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKL 143 (258)
T ss_pred -hheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence 333332 56899999999999988754221 1 237789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcc-----hh--h
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFL-----DK--E 314 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l-----~~--~ 314 (472)
+|||.+........ .....+..+..+|+.+.... ++.++|+||||+.+++++++..+.- .. .
T Consensus 144 ~d~~~~~~~~~~~~----------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~ 213 (258)
T cd06632 144 ADFGMAKQVVEFSF----------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK 213 (258)
T ss_pred ccCccceecccccc----------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH
Confidence 99999876533210 11112222233454443444 8899999999999999998754321 00 0
Q ss_pred --------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 --------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 --------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.....++..+.++|.+|+..+|.+||+..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 253 (258)
T cd06632 214 IGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELL 253 (258)
T ss_pred HHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 01234678889999999999999999987643
No 195
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93 E-value=2.1e-25 Score=219.34 Aligned_cols=223 Identities=13% Similarity=0.121 Sum_probs=161.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .++..||||++..... ... ...+.+|+.++.++.|+++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~--------------------~~~~~~e~~~l~~l~h~~i 64 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDE--------------------IEDIQQEITVLSQCDSPYV 64 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHH--------------------HHHHHHHHHHHHhCCCCCE
Confidence 44568899999999999998 4688999998863211 110 0134578999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccCC-h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.+++. +..++||||++|++|.+++.... + ..++.+++.+|.+||+.|++|+||+|.||+++.++.++|
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l 142 (277)
T cd06640 65 --TKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKL 142 (277)
T ss_pred --eeEEEEEEECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEE
Confidence 444432 67899999999999988764321 1 247789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL 315 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~ 315 (472)
+|||.+........ ....+....+..+|+.+.....+.++|+||||+.+++++++..+.... .+
T Consensus 143 ~dfg~~~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 213 (277)
T cd06640 143 ADFGVAGQLTDTQI---------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 213 (277)
T ss_pred cccccceeccCCcc---------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh
Confidence 99999875532110 001112222334555555677899999999999999999976432110 00
Q ss_pred -------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 316 -------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 316 -------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
....++..+.++|.+|+..+|++||+.++-..
T Consensus 214 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 214 PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 11235677889999999999999999876543
No 196
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.93 E-value=1.9e-25 Score=219.37 Aligned_cols=223 Identities=13% Similarity=0.124 Sum_probs=161.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|.+ .++..||+|+++...... ...+.+|+.++.++.|+++
T Consensus 7 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------~~~~~~e~~~l~~l~h~~i 64 (280)
T cd06611 7 WEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEE----------------------LEDFMVEIDILSECKHPNI 64 (280)
T ss_pred HHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHH----------------------HHHHHHHHHHHHhCCCCce
Confidence 45668899999999999998 468999999986432111 0124468999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. ...++||||++|++|..++... . ...++.+++.+|.|||+.||+|+||+|.||+++.++.+
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~ 142 (280)
T cd06611 65 --VGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDV 142 (280)
T ss_pred --eEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCE
Confidence 444432 5689999999999998875321 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-----ccCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-----TDGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-----~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
+|+|||.+......... ...+++..+.++|+.. ....++.++|+||||+++|+++++..+.-..
T Consensus 143 ~l~d~g~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~ 213 (280)
T cd06611 143 KLADFGVSAKNKSTLQK---------RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP 213 (280)
T ss_pred EEccCccchhhcccccc---------cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH
Confidence 99999988654322110 0111222223344432 1345778999999999999999976432110
Q ss_pred -------------hh-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -------------EL-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -------------~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ ....++.++.++|.+|+..+|.+||+.++-...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 214 MRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00 124578899999999999999999998876553
No 197
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=2e-25 Score=232.25 Aligned_cols=218 Identities=17% Similarity=0.155 Sum_probs=161.8
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
.+.+.||+|-||.||.|.+.....||||.++.+..+- ..+.+|+.+|++|+|.++
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~-----------------------~~f~~Ea~iMk~L~H~~l-- 263 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP-----------------------EAFLREAQIMKKLRHEKL-- 263 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccccCh-----------------------hHHHHHHHHHHhCcccCe--
Confidence 3457899999999999998766689999998663222 133479999999998653
Q ss_pred ceeeec----CCceeEEeecCCCChhhhhccC------Ch--HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 174 PNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NP--DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 174 P~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~--~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
.+.+++ ...||||||++.+.|.+++... .+ ..++.||+++|+||.++++|||||-..||||+++..+|
T Consensus 264 V~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vK 343 (468)
T KOG0197|consen 264 VKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVK 343 (468)
T ss_pred EEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEE
Confidence 333332 3479999999999998876531 11 25889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc------h---
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL------D--- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l------~--- 312 (472)
|+|||+|+...+. +|..++-.. | +-.-++|+....+.++.+|||||||++++|..|.-..+. +
T Consensus 344 IsDFGLAr~~~d~---~Y~~~~~~k----f-PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~ 415 (468)
T KOG0197|consen 344 ISDFGLARLIGDD---EYTASEGGK----F-PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE 415 (468)
T ss_pred EcccccccccCCC---ceeecCCCC----C-CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH
Confidence 9999999843211 121111111 1 112345666677999999999999999999998422110 0
Q ss_pred ---h--hhh-ccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 ---K--ELA-ASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 ---~--~~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
. .+. +.+.+.+.=+++..|-..+|++|||=+-
T Consensus 416 ~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 416 LLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred HHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 0 122 4567778889999999999999999653
No 198
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.93 E-value=5.2e-25 Score=214.66 Aligned_cols=222 Identities=12% Similarity=0.085 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+.+.+.||+|+||.||+|... +...||||+.+.....- .+..+.+|+.+|.++.|
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h 64 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDK---------------------QRLDFLTEASIMGQFDH 64 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChH---------------------HHHHHHHHHHHHHhCCC
Confidence 456799999999999999874 23579999876432111 11234568999999988
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ ++.++ .+..+++|||++|++|..++... .. ..++.+++.++.+||++||+||||||.||+++.+
T Consensus 65 ~~i--~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~ 142 (266)
T cd05033 65 PNI--IRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN 142 (266)
T ss_pred CCc--ceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence 653 33333 25689999999999998875321 11 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhh-ccCCcc--h-
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL--D- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l--~- 312 (472)
+.++|+|||.+.....+.... ... . ...... .+|+......++.++|+||||+.+++.++ +..+.. .
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~------~~~-~-~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~ 214 (266)
T cd05033 143 LVCKVSDFGLSRRLEDSEATY------TTK-G-GKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN 214 (266)
T ss_pred CCEEECccchhhcccccccce------ecc-C-CCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH
Confidence 999999999998664221110 000 0 011122 34454455778999999999999999876 432211 0
Q ss_pred h----hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 K----EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ~----~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .+ .....+..+.+++.+|+..+|++||+.++-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei 258 (266)
T cd05033 215 QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQI 258 (266)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 0 00 123457889999999999999999998764
No 199
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.93 E-value=2.9e-25 Score=214.18 Aligned_cols=223 Identities=15% Similarity=0.196 Sum_probs=162.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|+||.||+|.+ .+|..||+|++......-.. ......|+.++.++.|+++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~--------------------~~~~~~e~~~l~~l~~~~i 61 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKE--------------------KQQLVSEVNILRELKHPNI 61 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHH--------------------HHHHHHHHHHHHhcCCCcc
Confidence 56678999999999999988 57899999987643211110 1234578999999988764
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhccC------Ch----HHHHHHHHHHHHHHH-----HCCceeccCCCC
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ------NP----DSVFETIIGLVVRLA-----EHGLIHCDFNEF 230 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~------~~----~~i~~qIl~aL~~LH-----~~GIIHrDLKP~ 230 (472)
+.+++. ...+++|||++|++|..++... .+ ..++.+|+.+|.+|| ..+|+|+||+|.
T Consensus 62 --~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~ 139 (265)
T cd08217 62 --VRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPA 139 (265)
T ss_pred --ceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHH
Confidence 333321 3468999999999998775321 11 247889999999999 899999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
||+++.++.++|+|||.+....+... ....+.+.....+|+......++.++|+||||+++++++++..+.
T Consensus 140 nili~~~~~~kl~d~g~~~~~~~~~~---------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~ 210 (265)
T cd08217 140 NIFLDANNNVKLGDFGLAKILGHDSS---------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPF 210 (265)
T ss_pred HEEEecCCCEEEecccccccccCCcc---------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcc
Confidence 99999999999999999886543211 011122333334555555667889999999999999999875321
Q ss_pred ch-------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 311 LD-------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 311 l~-------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
-. . ......++..+.++|.+|+..+|++||+..+-.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il 260 (265)
T cd08217 211 TARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELL 260 (265)
T ss_pred cCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 10 0 012346778899999999999999999987643
No 200
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.93 E-value=3.7e-25 Score=218.95 Aligned_cols=225 Identities=16% Similarity=0.089 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|.+.+.||+|+||.||+|... .+..||||......... ....+.+|+.+++++
T Consensus 8 ~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~e~~~l~~l 66 (288)
T cd05061 8 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR---------------------ERIEFLNEASVMKGF 66 (288)
T ss_pred ceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH---------------------HHHHHHHHHHHHHhC
Confidence 567799999999999999653 24589999865321100 011345789999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC----------------ChHHHHHHHHHHHHHHHHCCceecc
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----------------NPDSVFETIIGLVVRLAEHGLIHCD 226 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----------------~~~~i~~qIl~aL~~LH~~GIIHrD 226 (472)
.|+++ +++++. +..++||||++|++|..++... ....++.+++.+|.|||++||+|||
T Consensus 67 ~~~~i--~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d 144 (288)
T cd05061 67 TCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD 144 (288)
T ss_pred CCCCe--eeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 87653 444432 5689999999999998876321 0124788999999999999999999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
|||.|||++.++.++|+|||.+.....+.... . .. ........++|+......++.++|+||||++++++++.
T Consensus 145 ikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~---~---~~-~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~ 217 (288)
T cd05061 145 LAARNCMVAHDFTVKIGDFGMTRDIYETDYYR---K---GG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 217 (288)
T ss_pred CChheEEEcCCCcEEECcCCcccccccccccc---c---cC-CCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhC
Confidence 99999999999999999999987543221100 0 00 00111122345544567789999999999999998873
Q ss_pred -cCCc--ch-hh----h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 307 -TAGF--LD-KE----L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 307 -~~~~--l~-~~----~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+. .. .. + .....+..+.++|.+|+..+|++|||..+..+
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 273 (288)
T cd05061 218 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273 (288)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 2211 00 00 0 12345678899999999999999999887654
No 201
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.93 E-value=5.6e-25 Score=218.88 Aligned_cols=220 Identities=11% Similarity=0.053 Sum_probs=154.6
Q ss_pred eeecceecccCceeEEEEEeC-CCC--EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hh
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGT--VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-ED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~--~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~ 168 (472)
|.+.+.||.|+||.||+|... ++. .+++|.++....... ...+.+|+.++.++ .|
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~---------------------~~~~~~E~~~l~~l~~h 62 (297)
T cd05089 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEND---------------------HRDFAGELEVLCKLGHH 62 (297)
T ss_pred ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHH---------------------HHHHHHHHHHHHhhcCC
Confidence 456789999999999999884 443 478887653211100 11345799999999 45
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccC------------------C----hHHHHHHHHHHHHHHHHCCc
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------------------N----PDSVFETIIGLVVRLAEHGL 222 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------------------~----~~~i~~qIl~aL~~LH~~GI 222 (472)
+++ ..+++ .+..+++|||+++++|.+++... . ...++.|++.+|.+||++||
T Consensus 63 p~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i 140 (297)
T cd05089 63 PNI--INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF 140 (297)
T ss_pred Cch--hheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 442 33333 25689999999999998775321 1 12478899999999999999
Q ss_pred eeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhh
Q 012042 223 IHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 223 IHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
+||||||.|||++.++.++|+|||.+...... ..... ....+.| +|+......++.++||||||++++
T Consensus 141 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----~~~~~------~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ 209 (297)
T cd05089 141 IHRDLAARNVLVGENLASKIADFGLSRGEEVY-----VKKTM------GRLPVRWMAIESLNYSVYTTKSDVWSFGVLLW 209 (297)
T ss_pred ccCcCCcceEEECCCCeEEECCcCCCccccce-----eccCC------CCcCccccCchhhccCCCCchhhHHHHHHHHH
Confidence 99999999999999999999999998632211 00000 1112223 444445667899999999999999
Q ss_pred hhhh-ccCCcchh-------hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 302 ASIS-KTAGFLDK-------EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 302 ~~~t-~~~~~l~~-------~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
++++ +..+.... .+ ....++..+.++|.+|++.+|.+||+.++..
T Consensus 210 el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 269 (297)
T cd05089 210 EIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQIS 269 (297)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 9987 54322110 00 1235788899999999999999999988753
No 202
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.93 E-value=3.5e-25 Score=217.99 Aligned_cols=222 Identities=13% Similarity=0.124 Sum_probs=158.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|+||.||+|.+. ++..+++|.+.... .... ....+|+.++..+.|+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~--------------------~~~~~e~~~l~~l~h~~i 64 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEEL--------------------EDYMVEIDILASCDHPNI 64 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHH--------------------HHHHHHHHHHHHCCCCCe
Confidence 456788999999999999984 58889999875332 1111 124468999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc-C--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-Q--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++ .+..++||||++|++|..++.. . .+ ..++.+++.+|.+||+.||+||||||.|||++.++.+
T Consensus 65 --i~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~ 142 (282)
T cd06643 65 --VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDI 142 (282)
T ss_pred --eeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCE
Confidence 33333 2668999999999999776421 1 11 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-----ccCCCCcchheeccCchhhhhhhccCCcc--h-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-----TDGDDGSDIDTDEGSRLSFASISKTAGFL--D- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-----~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~- 312 (472)
+|+|||++........ ....+.+.....+|+.. ....++.++|+||||++++++.++..+.- .
T Consensus 143 kl~dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 213 (282)
T cd06643 143 KLADFGVSAKNTRTIQ---------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP 213 (282)
T ss_pred EEcccccccccccccc---------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH
Confidence 9999999864421110 00111122222344432 23457789999999999999998754321 0
Q ss_pred h------------h-hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 K------------E-LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~------------~-~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. . .....++.++.++|.+|+..+|.+||+.++...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 214 MRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 012347788999999999999999999876654
No 203
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.93 E-value=4.1e-25 Score=212.39 Aligned_cols=219 Identities=16% Similarity=0.078 Sum_probs=158.4
Q ss_pred ceecccCceeEEEEEeC-C---CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 97 RQLGVGKESDIFEVARE-D---GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~-~---g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.||+|+||.||+|... . +..|+||+++.....- ....+.+|+..+..+.|+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~---------------------~~~~~~~e~~~l~~~~~~~i- 58 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE---------------------ERKDFLKEARVMKKLGHPNV- 58 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh---------------------HHHHHHHHHHHHhhcCCCCh-
Confidence 46899999999999984 3 7889999886432111 01245679999999987653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC-----------Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-----------NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-----------~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
+.++.. ...+++|||++|++|..++... .+ ..++.+++.+|.+||+.||+||||+|.||+
T Consensus 59 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nil 137 (262)
T cd00192 59 -VRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCL 137 (262)
T ss_pred -heeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEE
Confidence 333332 5689999999999998876432 11 248899999999999999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc-cCCcch
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK-TAGFLD 312 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~-~~~~l~ 312 (472)
++.++.++|+|||.+........ . .............+|+......++.++|+||+|++++++++. ..+...
T Consensus 138 i~~~~~~~l~dfg~~~~~~~~~~---~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 210 (262)
T cd00192 138 VGEDLVVKISDFGLSRDVYDDDY---Y----RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG 210 (262)
T ss_pred ECCCCcEEEcccccccccccccc---c----ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999986543221 0 000111112222345544456789999999999999999884 322110
Q ss_pred -------hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 -------KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 -------~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. .....++..+..+|.+|+..+|++|||+++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 257 (262)
T cd00192 211 LSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSEL 257 (262)
T ss_pred CCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHH
Confidence 00 1134567889999999999999999998764
No 204
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.93 E-value=6.7e-25 Score=216.89 Aligned_cols=222 Identities=14% Similarity=0.135 Sum_probs=155.9
Q ss_pred eeecceecccCceeEEEEEeCC-----------------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHH
Q 012042 93 TAVGRQLGVGKESDIFEVARED-----------------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLA 155 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~-----------------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~ 155 (472)
|++.+.||+|+||.||+|.+.. +..||+|++...... . ....
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~--------------------~~~~ 65 (296)
T cd05051 7 LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-N--------------------ARED 65 (296)
T ss_pred CcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-H--------------------HHHH
Confidence 4677999999999999998632 245899987643211 0 0123
Q ss_pred HHHHHHHHHHhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC-------------h----HHHHHHHHHHH
Q 012042 156 ALKEFAFMKALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-------------P----DSVFETIIGLV 214 (472)
Q Consensus 156 a~rE~~~L~~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-------------~----~~i~~qIl~aL 214 (472)
+.+|+.+|.++.|+++ ..++.. ...+++|||+++++|..++.... + ..++.+++.+|
T Consensus 66 ~~~e~~~l~~l~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05051 66 FLKEVKILSRLSDPNI--ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGM 143 (296)
T ss_pred HHHHHHHHHhcCCCCE--eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence 4579999999988653 333332 67899999999999988753211 1 23778999999
Q ss_pred HHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchhe
Q 012042 215 VRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDT 293 (472)
Q Consensus 215 ~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDi 293 (472)
.+||++||+||||||.||+++.++.++|+|||.+.....+.. ............| +|+......++.++|+
T Consensus 144 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 144 RYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY--------YRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred HHHHHcCccccccchhceeecCCCceEEccccceeecccCcc--------eeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 999999999999999999999999999999999875432211 0000001112233 4444455678999999
Q ss_pred eccCchhhhhhhc--cCCc--c-hhh------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 294 DEGSRLSFASISK--TAGF--L-DKE------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 294 ySlG~~~f~~~t~--~~~~--l-~~~------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
||||+++|+..+. ..+. . ... .....++.++.++|.+|++.+|++||+..+.
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el 290 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREI 290 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHH
Confidence 9999999998873 1111 0 000 0123456889999999999999999998764
No 205
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.93 E-value=4.4e-25 Score=213.77 Aligned_cols=225 Identities=14% Similarity=0.127 Sum_probs=161.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++++.||.|+||.||+|.. .++..+|||++......- . ...+.+|+..|..+.|+++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~--------------------~~~~~~e~~~l~~l~~~~i 61 (267)
T cd06610 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-S--------------------VDELRKEVQAMSQCNHPNV 61 (267)
T ss_pred ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-H--------------------HHHHHHHHHHHHhcCCCCE
Confidence 56789999999999999997 468899999886432111 1 1134578999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccCC-----h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN-----P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~-----~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+.++. .+..++||||++|++|..++.... + ..++.+++.+|.+||+.||+||||+|.||++++++
T Consensus 62 --~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~ 139 (267)
T cd06610 62 --VKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG 139 (267)
T ss_pred --EEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC
Confidence 33333 266899999999999988764221 1 24788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccC-CCCcchheeccCchhhhhhhccCCcchh---
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDG-DDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~-~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
.++|+|||.+.....+.... ......+.....| +|+..... ..+.++|+||||+.+++++++..+.-..
T Consensus 140 ~~~l~df~~~~~~~~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~ 213 (267)
T cd06610 140 SVKIADFGVSASLADGGDRT------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM 213 (267)
T ss_pred CEEEcccchHHHhccCcccc------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh
Confidence 99999999987654432210 0111111122333 45443333 6889999999999999999975432100
Q ss_pred ----h--------hh----ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ----E--------LA----ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ----~--------~~----~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .. ...++..+.++|.+|+..+|++||+..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll 262 (267)
T cd06610 214 KVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELL 262 (267)
T ss_pred hhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0 00 125778889999999999999999977643
No 206
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.93 E-value=5.2e-25 Score=220.52 Aligned_cols=231 Identities=16% Similarity=0.170 Sum_probs=162.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|++|.||+|... +++.||||.+......... ....+..|+.+|.++.|+++
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~l~~~~i 63 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRN-------------------KVKRVLTEQEILATLDHPFL 63 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHH-------------------HHHHHHHHHHHHHhCCCCCc
Confidence 566789999999999999985 5999999988643211100 01235579999999988654
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.++.. ...|++|||+.|++|..++... .+ ..++.+++.+|.|||..|++||||||.||+++.++.
T Consensus 64 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~ 141 (316)
T cd05574 64 --PTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGH 141 (316)
T ss_pred --hhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCC
Confidence 444432 5679999999999998876421 11 236789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhh--------------------hccccchhhhhccccccccccccccCCCCcchheeccCch
Q 012042 240 VTMIDFPQMVSVSHQNAQMY--------------------FDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRL 299 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~--------------------l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~ 299 (472)
++|+|||++........... ..........+.+....++|+.+.+..++.++|+||||++
T Consensus 142 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~l 221 (316)
T cd05574 142 IMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGIL 221 (316)
T ss_pred EEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 99999999875432111000 0000001112233333345555566778999999999999
Q ss_pred hhhhhhccCCcchh------------hh--h-ccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 300 SFASISKTAGFLDK------------EL--A-ASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 300 ~f~~~t~~~~~l~~------------~~--~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
+++++++..+.... .. . ...++..+.++|.+|+..+|++||++..
T Consensus 222 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~ 281 (316)
T cd05574 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKR 281 (316)
T ss_pred HHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchh
Confidence 99999876432100 00 0 1125788999999999999999999433
No 207
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.93 E-value=5.1e-25 Score=215.44 Aligned_cols=224 Identities=16% Similarity=0.058 Sum_probs=157.7
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||.|+||.||+|... ++..||||.......... ...+.+|+.+|..+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~---------------------~~~~~~e~~~l~~~ 66 (277)
T cd05032 8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRE---------------------RIEFLNEASVMKEF 66 (277)
T ss_pred eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHH---------------------HHHHHHHHHHHHhC
Confidence 456799999999999999873 236899998753211110 11345789999998
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------C---hHHHHHHHHHHHHHHHHCCceecc
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------N---PDSVFETIIGLVVRLAEHGLIHCD 226 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------~---~~~i~~qIl~aL~~LH~~GIIHrD 226 (472)
.|+++ .+.++. ...++||||+++++|..++... . ...++.+++.+|.|||+.||+|||
T Consensus 67 ~~~~i--~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 144 (277)
T cd05032 67 NCHHV--VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRD 144 (277)
T ss_pred CCCce--eEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 87643 334332 6689999999999998875321 0 123678999999999999999999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS- 305 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t- 305 (472)
|||.|||++.++.++|+|||++.......... ............+|+....+.++.++|+||||+++++.++
T Consensus 145 i~p~nill~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 217 (277)
T cd05032 145 LAARNCMVAEDLTVKIGDFGMTRDIYETDYYR-------KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATL 217 (277)
T ss_pred cChheEEEcCCCCEEECCcccchhhccCcccc-------cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhcc
Confidence 99999999999999999999987543221100 0000011112234444456778999999999999999987
Q ss_pred ccCCcch--------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 306 KTAGFLD--------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 306 ~~~~~l~--------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+..+... ....+..++..+.++|.+|+..+|++||+..+..
T Consensus 218 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 272 (277)
T cd05032 218 AEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIV 272 (277)
T ss_pred CCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 4322110 0012345778899999999999999999987653
No 208
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=2.4e-25 Score=237.03 Aligned_cols=220 Identities=13% Similarity=0.143 Sum_probs=156.1
Q ss_pred CceeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 90 GVFTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+.-|.+.+.||+|+||.||+|.+. +++.||||..... ...+|+.+|.+|.|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~----------------------------~~~~E~~iL~~L~H 219 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYA----------------------------SSVHEARLLRRLSH 219 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccccc----------------------------CHHHHHHHHHHCCC
Confidence 334777899999999999999994 6889999953211 12369999999998
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
.++ ..+++. +..+||||++.| +|...+... ....++.||+.+|.|||+.|||||||||.||||+.+
T Consensus 220 pnI--v~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~ 296 (461)
T PHA03211 220 PAV--LALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP 296 (461)
T ss_pred CCC--CcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCC
Confidence 764 344432 568999999975 555543211 123588999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc-------
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF------- 310 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~------- 310 (472)
+.++|+|||+++.......... ...+.++..+++|+.+.+..++.++||||||+++++++++....
T Consensus 297 ~~vkL~DFGla~~~~~~~~~~~-------~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~ 369 (461)
T PHA03211 297 EDICLGDFGAACFARGSWSTPF-------HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD 369 (461)
T ss_pred CCEEEcccCCceeccccccccc-------ccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence 9999999999975532211100 01122333344566556778999999999999999987632110
Q ss_pred --------chhhhh----------------------------------------ccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 311 --------LDKELA----------------------------------------ASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 311 --------l~~~~~----------------------------------------~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
+...+. ...++....++|.+||..+|.+|||+
T Consensus 370 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa 449 (461)
T PHA03211 370 ERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSA 449 (461)
T ss_pred ccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCH
Confidence 000000 00234467789999999999999999
Q ss_pred CCCCC
Q 012042 343 DEGSD 347 (472)
Q Consensus 343 ~e~~~ 347 (472)
.|.+.
T Consensus 450 ~elL~ 454 (461)
T PHA03211 450 AELLR 454 (461)
T ss_pred HHHhh
Confidence 88665
No 209
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.92 E-value=5e-25 Score=216.18 Aligned_cols=223 Identities=13% Similarity=0.125 Sum_probs=159.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++...||+|++|.||+|.+. +|+.||+|.+........ ....+.+|+.++.++.|+++
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--------------------~~~~~~~e~~~l~~~~h~~i 62 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV--------------------IKKIALREIRMLKQLKHPNL 62 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc--------------------ccHHHHHHHHHHHhCCCCCE
Confidence 566788999999999999985 699999998753221100 00124579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..+++ ....++||||+++..|..+.... . ...++.+|+.+|.+||+.||+||||||.||+++.++.++
T Consensus 63 --~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~ 140 (286)
T cd07847 63 --VNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIK 140 (286)
T ss_pred --eeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEE
Confidence 33333 25678999999998887764322 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcch-----h--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLD-----K-- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~-- 313 (472)
|+|||.+.....+... ...+++..+..+|+... ...++.++|+||||+++++++++...... .
T Consensus 141 l~dfg~~~~~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~ 211 (286)
T cd07847 141 LCDFGFARILTGPGDD---------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY 211 (286)
T ss_pred ECccccceecCCCccc---------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 9999999765433210 11123333334555433 35678899999999999999987532110 0
Q ss_pred h-------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 E-------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ~-------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. ....+++..+.++|.+|+..+|++||+..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 212 LIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred HHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 0 00134677788999999999999999987643
No 210
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.92 E-value=1.1e-24 Score=215.29 Aligned_cols=224 Identities=13% Similarity=0.116 Sum_probs=156.5
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|.+.+.||+|+||.||++... ....+|+|.++.... ... ...+.+|+.++.++
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~--------------------~~~~~~E~~~l~~l 72 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKD--------------------LSDLVSEMEMMKMI 72 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHH--------------------HHHHHHHHHHHHhh
Confidence 566789999999999999863 236799998763211 000 01245799999998
Q ss_pred -hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------------C---hHHHHHHHHHHHHHHHH
Q 012042 167 -EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------------N---PDSVFETIIGLVVRLAE 219 (472)
Q Consensus 167 -~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------------~---~~~i~~qIl~aL~~LH~ 219 (472)
.|.++ ...++. +..+++|||+++++|..++... . ...++.|++.+|.|||+
T Consensus 73 ~~h~~i--~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~ 150 (293)
T cd05053 73 GKHKNI--INLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS 150 (293)
T ss_pred cCCCCe--eeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 45432 222322 5689999999999998875321 0 12378899999999999
Q ss_pred CCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCc
Q 012042 220 HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSR 298 (472)
Q Consensus 220 ~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~ 298 (472)
.||+||||||.||+++.++.++|+|||.+.....+.. . +.... ....+.| +|+.+....++.++|+||||+
T Consensus 151 ~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~-~~~~~----~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 222 (293)
T cd05053 151 KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDY---Y-RKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGV 222 (293)
T ss_pred CCccccccceeeEEEcCCCeEEeCccccccccccccc---e-eccCC----CCCCccccCHHHhccCCcCcccceeehhh
Confidence 9999999999999999999999999999976533211 0 00000 0112333 455456678899999999999
Q ss_pred hhhhhhh-ccCCcch----h---h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 299 LSFASIS-KTAGFLD----K---E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 299 ~~f~~~t-~~~~~l~----~---~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++|+.++ +..+... . . ......+..+.++|.+|+..+|++|||+.+-.+
T Consensus 223 il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~ 286 (293)
T cd05053 223 LLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVE 286 (293)
T ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 9999876 3322110 0 0 012345678899999999999999999887543
No 211
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.92 E-value=7.7e-25 Score=213.52 Aligned_cols=229 Identities=14% Similarity=0.147 Sum_probs=163.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+++.||+|+||.||+|.+ .+|..||+|.+......... ......+.+|+.++.++.|.++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~-----------------~~~~~~~~~ei~~l~~l~h~~i 66 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET-----------------SKEVNALECEIQLLKNLRHDRI 66 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh-----------------hHHHHHHHHHHHHHHHcCCCCc
Confidence 67789999999999999998 46999999987532111000 0011245689999999988764
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
...++. +..+++|||++|++|...+... ....++.+++.+|.+||+.|++|+||+|.||+++.++.
T Consensus 67 --~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~ 144 (264)
T cd06653 67 --VQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGN 144 (264)
T ss_pred --ceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC
Confidence 333322 3478999999999998765322 12347889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
++|+|||.+.....+.. +......+.+.....+|+......++.++|+||||+.+++++++..+..+
T Consensus 145 ~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 218 (264)
T cd06653 145 VKLGDFGASKRIQTICM------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI 218 (264)
T ss_pred EEECccccccccccccc------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH
Confidence 99999999976533211 00111222333333455544556788999999999999999997543211
Q ss_pred --------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
....+..++.++++.|.+|+. +|..||++.+...
T Consensus 219 ~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 219 FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 011245688889999999999 5799999886543
No 212
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.92 E-value=1e-25 Score=240.41 Aligned_cols=187 Identities=16% Similarity=0.247 Sum_probs=141.7
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC--
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF-- 171 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi-- 171 (472)
..+.||+|+||.||++++ .+|+.||||.++... + .+++..| -+|+++|++|+|++|
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~-----------~r~~e~~--------~~EieilkKLnh~NIVk 75 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--S-----------LRPRERW--------CREIEILKKLNHPNIVK 75 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhc--c-----------cchHHHH--------HHHHHHHHHcCchhhhh
Confidence 357899999999999997 689999999876321 1 1122223 479999999998653
Q ss_pred --Ccceeee----cCCceeEEeecCCCChhhhhccC-----ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 --PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 --~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
.+|..-. ....++|||||.|++|...++.. .|+ .++..+..||.|||++|||||||||.|||+..
T Consensus 76 ~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~ 155 (732)
T KOG4250|consen 76 LFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQI 155 (732)
T ss_pred hcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEee
Confidence 1222111 24568999999999999987532 233 36778889999999999999999999999963
Q ss_pred --CCc--EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcc
Q 012042 237 --DEK--VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 237 --~g~--vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
+|+ -||+|||.|+.++.. .-+..++++.-++.|+.+. .+.++.-+|.||||+++|+.+||..+++
T Consensus 156 Gedgq~IyKLtDfG~Arel~d~----------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 156 GEDGQSIYKLTDFGAARELDDN----------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cCCCceEEeeecccccccCCCC----------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 343 589999999977532 2344566666667788765 4899999999999999999999876654
Q ss_pred h
Q 012042 312 D 312 (472)
Q Consensus 312 ~ 312 (472)
.
T Consensus 226 p 226 (732)
T KOG4250|consen 226 P 226 (732)
T ss_pred c
Confidence 3
No 213
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.92 E-value=5e-25 Score=217.54 Aligned_cols=222 Identities=11% Similarity=0.098 Sum_probs=158.1
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|.+.+.||+|+||.||+|... ++..||||+++...... ....+.+|+.++.++
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---------------------~~~~~~~ei~~l~~l 65 (288)
T cd05050 7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD---------------------MQADFQREAALMAEF 65 (288)
T ss_pred ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHH---------------------HHHHHHHHHHHHHhc
Confidence 456789999999999999863 46789999876432110 011345799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC----------------------------hHHHHHHHHHHH
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN----------------------------PDSVFETIIGLV 214 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~----------------------------~~~i~~qIl~aL 214 (472)
.|+++ .++++. ...+++|||+++++|.+++.... ...++.+++.+|
T Consensus 66 ~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL 143 (288)
T cd05050 66 DHPNI--VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGM 143 (288)
T ss_pred CCCch--heEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHH
Confidence 88654 333432 56799999999999988753110 124889999999
Q ss_pred HHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchhe
Q 012042 215 VRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDT 293 (472)
Q Consensus 215 ~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDi 293 (472)
.+||..|++||||||.|||++.++.++|+|||.+........ . ......+. ...| +|+......++.++|+
T Consensus 144 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---~----~~~~~~~~-~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 144 AYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY---Y----KASENDAI-PIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred HHHHhCCeecccccHhheEecCCCceEECccccceecccCcc---c----cccCCCcc-ChhhcCHHHHhcCCCCchhHH
Confidence 999999999999999999999999999999999875432211 0 00000011 1223 4444456788999999
Q ss_pred eccCchhhhhhh-ccCCcc--h-hh----h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 294 DEGSRLSFASIS-KTAGFL--D-KE----L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 294 ySlG~~~f~~~t-~~~~~l--~-~~----~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
||||+++|++++ +..+.. . .. + .+..++.++.++|.+|+..+|++||++.|.
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el 282 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASI 282 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 999999999886 322211 0 00 0 134577889999999999999999998764
No 214
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.92 E-value=4.9e-25 Score=218.04 Aligned_cols=223 Identities=15% Similarity=0.121 Sum_probs=157.4
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+++.+.||+|+||.||+|... ....+++|++....... . ...+.+|+.+|..+
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~--------------------~~~~~~E~~~l~~l 60 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSS-E--------------------LRDLLSEFNLLKQV 60 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHH-H--------------------HHHHHHHHHHHhhC
Confidence 356789999999999999863 23579999875332111 0 01345799999999
Q ss_pred hhCCCCcceeee----cCCceeEEeecCCCChhhhhccC---------------------------Ch---HHHHHHHHH
Q 012042 167 EDHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---------------------------NP---DSVFETIIG 212 (472)
Q Consensus 167 ~~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---------------------------~~---~~i~~qIl~ 212 (472)
.|+++ +++++ .+..+++|||+.|++|..++... .. ..++.+++.
T Consensus 61 ~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~ 138 (290)
T cd05045 61 NHPHV--IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISR 138 (290)
T ss_pred CCCCE--eeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHH
Confidence 88653 33333 26689999999999998764310 00 247889999
Q ss_pred HHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcch
Q 012042 213 LVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDI 291 (472)
Q Consensus 213 aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~s 291 (472)
+|.+||++||+||||||.|||+++++.++|+|||.+........ +..... ...... ++|+.+....++.++
T Consensus 139 ~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~------~~~~~~y~apE~~~~~~~~~~~ 210 (290)
T cd05045 139 GMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS--YVKRSK------GRIPVKWMAIESLFDHIYTTQS 210 (290)
T ss_pred HHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc--hhcccC------CCCCccccCHHHHccCCcchHh
Confidence 99999999999999999999999999999999999875432211 111110 111122 345544567789999
Q ss_pred heeccCchhhhhhh-ccCCcc---hhh-----------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 292 DTDEGSRLSFASIS-KTAGFL---DKE-----------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 292 DiySlG~~~f~~~t-~~~~~l---~~~-----------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
||||||++++++++ +..+.. ... .....++..+.++|.+|++.+|++||+..+..
T Consensus 211 Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~ 280 (290)
T cd05045 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADIS 280 (290)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 99999999999998 542211 000 01345778899999999999999999987653
No 215
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.92 E-value=4e-25 Score=217.06 Aligned_cols=224 Identities=15% Similarity=0.166 Sum_probs=160.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+. +++.||||.++.....-. ....+.+|+.++.++.|.++
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 62 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDED--------------------VKKTALREVKVLRQLRHENI 62 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccccc--------------------chhHHHHHHHHHHhcCCCCe
Confidence 677899999999999999984 689999998753211000 01235679999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..+++|||+++..+..+.... ....++.+|+.++.+||..||+||||+|.||+++.++.++
T Consensus 63 --~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~k 140 (288)
T cd07833 63 --VNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLK 140 (288)
T ss_pred --eehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence 333332 5689999999997776554321 1234788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccC-CCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG-DDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~-~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||.+........ .....+....+..+|+..... .++.++|+||||+++++++++.......
T Consensus 141 l~d~g~~~~~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~ 212 (288)
T cd07833 141 LCDFGFARALRARPA--------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLY 212 (288)
T ss_pred EEeeecccccCCCcc--------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999876543211 011123333344455544455 7889999999999999998865321100
Q ss_pred -------------------------------------h-hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------------------------------------E-LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------------------------------------~-~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .....++.++.++|.+|+..+|++||+.++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 283 (288)
T cd07833 213 LIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELL 283 (288)
T ss_pred HHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHh
Confidence 0 00112477889999999999999999987543
No 216
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.92 E-value=8.8e-25 Score=213.45 Aligned_cols=224 Identities=12% Similarity=0.076 Sum_probs=157.4
Q ss_pred eeecceecccCceeEEEEEeC-C---CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE-D---GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~---g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.+.+.||+|+||.||+|.+. + +..+|||.++.....- ....+.+|+.+|.++.|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h 64 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK---------------------QRRDFLSEASIMGQFDH 64 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHH---------------------HHHHHHHHHHHHHhCCC
Confidence 456799999999999999873 2 3379999875432110 01234579999999988
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ ++.++ .+..++||||++|++|..++... . ...++.+++.+|.+||+.|++||||||.|||++.+
T Consensus 65 ~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~ 142 (267)
T cd05066 65 PNI--IHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSN 142 (267)
T ss_pred CCc--ceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCC
Confidence 764 33333 26689999999999998876422 1 12477899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcchh---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLDK--- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~~--- 313 (472)
+.++|+|||.+........... ............+|+......++.++|+||||+.+++.++ +..+..+.
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~ 216 (267)
T cd05066 143 LVCKVSDFGLSRVLEDDPEAAY------TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ 216 (267)
T ss_pred CeEEeCCCCcccccccccceee------ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH
Confidence 9999999999976543211000 0000000111234554455778999999999999999776 54322110
Q ss_pred ----------hh-hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ----------EL-AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ----------~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. ...+++..+.+++.+|+..+|.+||+..+-
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 259 (267)
T cd05066 217 DVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQI 259 (267)
T ss_pred HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHH
Confidence 00 123467789999999999999999998654
No 217
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.92 E-value=4.8e-25 Score=217.69 Aligned_cols=222 Identities=13% Similarity=0.131 Sum_probs=155.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|.+. +++.||||.++....... .....+|+.++.++.|+++
T Consensus 7 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~h~~i 65 (291)
T cd07844 7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA---------------------PFTAIREASLLKDLKHANI 65 (291)
T ss_pred eeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC---------------------chhHHHHHHHHhhCCCcce
Confidence 567799999999999999984 689999998864321100 0013469999999988764
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. ...++||||+++ +|..++... . ...++.+++.+|.|||+.||+||||||.|||++.++.+
T Consensus 66 --~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~ 142 (291)
T cd07844 66 --VTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGEL 142 (291)
T ss_pred --eeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCE
Confidence 333332 568999999986 777654321 1 12477899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchhh-----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDKE----- 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~~----- 314 (472)
+|+|||.+.....+... .. .........+|+... ...++.++|+||+|+++++++++........
T Consensus 143 kl~dfg~~~~~~~~~~~------~~---~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~ 213 (291)
T cd07844 143 KLADFGLARAKSVPSKT------YS---NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ 213 (291)
T ss_pred EECccccccccCCCCcc------cc---ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH
Confidence 99999998654322110 00 001111223444333 3457889999999999999988753221000
Q ss_pred ---------------------------------------hhccCCC--HHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 ---------------------------------------LAASGFT--RKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 ---------------------------------------~~~~~~s--~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.....++ .+..++|.+||..+|++|||+.|...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 214 LHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred HHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0001233 66779999999999999999887543
No 218
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.92 E-value=8.3e-25 Score=208.42 Aligned_cols=219 Identities=14% Similarity=0.208 Sum_probs=161.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|++|.||++.+. ++..+++|+++...... ...+.+|+.++.++.++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----------------------~~~~~~e~~~l~~l~~~~i 59 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEK----------------------KEKIINEIQILKKCKHPNI 59 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhH----------------------HHHHHHHHHHHHhCCCCCE
Confidence 556789999999999999984 78999999986543211 1134579999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. ...+++|||++|.+|.+++... . ...++.+++.+|.+||.+|++||||+|.||++++++.+
T Consensus 60 --~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~ 137 (253)
T cd05122 60 --VKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEV 137 (253)
T ss_pred --eEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeE
Confidence 444432 6789999999999998875432 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||.+........ ...+.+....++|+.......+.++|+||||+++++++++..+.-..
T Consensus 138 ~l~d~~~~~~~~~~~~----------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 207 (253)
T cd05122 138 KLIDFGLSAQLSDTKA----------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF 207 (253)
T ss_pred EEeecccccccccccc----------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence 9999999976543321 00111222233455445566889999999999999999975322110
Q ss_pred --------hhh-ccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 --------ELA-ASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 --------~~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+. ...++..+.++|.+|+..+|++||++.+-
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~ 248 (253)
T cd05122 208 KIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQL 248 (253)
T ss_pred HHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 000 11237888999999999999999998654
No 219
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.92 E-value=7e-25 Score=215.10 Aligned_cols=223 Identities=16% Similarity=0.156 Sum_probs=159.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|.+ .+|+.||||++......... ...+.+|+.++.++.|+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~--------------------~~~~~~e~~~l~~~~~~~i 61 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGI--------------------PNQALREIKALQACQHPYV 61 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchh--------------------hHHHHHHHHHHHhCCCCCC
Confidence 56789999999999999998 47999999998643211110 1134579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++ ....++||||+ |++|..++... ....++.+|+.+|.+||+.||+|+||||.||+++.++.+
T Consensus 62 --~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~ 138 (286)
T cd07832 62 --VKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVL 138 (286)
T ss_pred --cceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcE
Confidence 33443 25689999999 99998875321 123478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcc---h----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFL---D---- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l---~---- 312 (472)
+|+|||.+.....+.... .....+.....+|+.+. ...++.++|+||+|+++++++++..... +
T Consensus 139 ~l~dfg~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~ 210 (286)
T cd07832 139 KIADFGLARLFSEEEPRL--------YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQL 210 (286)
T ss_pred EEeeeeecccccCCCCCc--------cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHH
Confidence 999999987654322100 00112222333455433 3456899999999999999998743210 0
Q ss_pred -h-----------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 -K-----------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 -~-----------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .......+.++.++|.+|+..+|++||++++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l 280 (286)
T cd07832 211 AIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEAL 280 (286)
T ss_pred HHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHh
Confidence 0 000123567788999999999999999987643
No 220
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.92 E-value=4.5e-25 Score=225.03 Aligned_cols=223 Identities=17% Similarity=0.126 Sum_probs=154.4
Q ss_pred eeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|++.+.||+|+||.||+|.+ .+++.||||+++..... .. ...+.+|+.+|.++
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~--------------------~~~~~~E~~~l~~l 67 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SE--------------------HRALMSELKILIHI 67 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-HH--------------------HHHHHHHHHHHHhc
Confidence 56789999999999999974 35789999998643211 00 01355799999999
Q ss_pred hh-CCCCcceeeec-----CCceeEEeecCCCChhhhhccCC--------------------------------------
Q 012042 167 ED-HGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQN-------------------------------------- 202 (472)
Q Consensus 167 ~~-~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~~-------------------------------------- 202 (472)
.+ +++ +..++. ...+++|||++|++|..++....
T Consensus 68 ~~h~ni--v~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (343)
T cd05103 68 GHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQ 145 (343)
T ss_pred cCCccH--hhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccc
Confidence 54 332 333321 45789999999999987642100
Q ss_pred -----------------------------------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 203 -----------------------------------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 203 -----------------------------------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
...++.+|+.+|.|||++||+||||||.|||++.++.++|+|||.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~ 225 (343)
T cd05103 146 SSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGL 225 (343)
T ss_pred ccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccc
Confidence 013677999999999999999999999999999999999999999
Q ss_pred ceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc----hh----hh--
Q 012042 248 MVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL----DK----EL-- 315 (472)
Q Consensus 248 A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l----~~----~~-- 315 (472)
+........ .... ......+.| +|+......++.++|+||||+++++.++ +..+.. .. .+
T Consensus 226 ~~~~~~~~~--~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 297 (343)
T cd05103 226 ARDIYKDPD--YVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 297 (343)
T ss_pred ccccccCcc--hhhc------CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc
Confidence 875422111 0000 001112334 4444456778999999999999999886 332210 00 00
Q ss_pred -----hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 316 -----AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 316 -----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.....+.++..++.+|+..+|++||+..+-.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil 333 (343)
T cd05103 298 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 333 (343)
T ss_pred cCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 1123567888999999999999999987653
No 221
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.92 E-value=7.7e-25 Score=215.41 Aligned_cols=220 Identities=14% Similarity=0.154 Sum_probs=155.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|++.+.||+|+||.||+|.+ .+++.+|||++...... ...+.+|+.++.++. |++
T Consensus 20 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-----------------------~~~~~~e~~~l~~l~~h~~ 76 (286)
T cd06638 20 WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI-----------------------DEEIEAEYNILKALSDHPN 76 (286)
T ss_pred eeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccch-----------------------HHHHHHHHHHHHHHhcCCC
Confidence 56778999999999999998 46899999987532110 012446888999984 654
Q ss_pred CCcceeeec---------CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 171 FPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 171 i~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
+ +.+++. +..++||||++|++|.+++.. ..+ ..++.+++.+|.+||+.||+||||||.|
T Consensus 77 i--~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n 154 (286)
T cd06638 77 V--VKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNN 154 (286)
T ss_pred e--eeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHh
Confidence 3 443332 347999999999999876421 111 2378899999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-ccccc-----ccCCCCcchheeccCchhhhhhh
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQET-----TDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~-----~~~~~~~~sDiySlG~~~f~~~t 305 (472)
|+++.++.++|+|||.+......... .+ ... ....| +|+.. ....++.++|+||+|++++++.+
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~~~----~~-----~~~-~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 155 ILLTTEGGVKLVDFGVSAQLTSTRLR----RN-----TSV-GTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred EEECCCCCEEEccCCceeecccCCCc----cc-----ccc-CCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 99999999999999998765322110 00 001 12233 34332 13457889999999999999988
Q ss_pred ccCCcch----hh-----------h-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 306 KTAGFLD----KE-----------L-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 306 ~~~~~l~----~~-----------~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+..+... .. + ....++.++..+|.+|+..+|++|||..|..+
T Consensus 225 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 225 GDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred CCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 7532110 00 0 12335778999999999999999999877543
No 222
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.92 E-value=4.6e-25 Score=222.89 Aligned_cols=230 Identities=11% Similarity=0.068 Sum_probs=158.6
Q ss_pred ecceeccc--CceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 95 VGRQLGVG--KESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 95 i~~~IG~G--~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.++||+| +|+.||++.+ .+|+.||||.++.....-. ....+.+|+.+++.+.|+++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~hpni 61 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNE--------------------MVTFLQGELHVSKLFNHPNI 61 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHH--------------------HHHHHHHHHHHHHhcCCCCe
Confidence 46789999 7899999988 5799999998863321100 01235579999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc---C-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---Q-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
.+.++ .+..++||||+++++|.+++.. . .+ ..++.+++.+|.|||++||+||||||.|||++.++.
T Consensus 62 --v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~ 139 (327)
T cd08227 62 --VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 139 (327)
T ss_pred --eeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCc
Confidence 33333 2678999999999999887532 1 11 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccc-ccccccc--CCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
++++||+.+............ ......+......| +|+.... ..++.++|+||||+++++++++..+....
T Consensus 140 ~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 216 (327)
T cd08227 140 VYLSGLRSNLSMINHGQRLRV---VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 216 (327)
T ss_pred EEEcccchhhccccccccccc---cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh
Confidence 999999876543221110000 01111111222333 4444332 45889999999999999999875432100
Q ss_pred h-----h---------------------------------------------------hccCCCHHHHHHHHHHHhcCcc
Q 012042 314 E-----L---------------------------------------------------AASGFTRKDQDVIQKFIGGSIE 337 (472)
Q Consensus 314 ~-----~---------------------------------------------------~~~~~s~~~~~~l~k~l~~~p~ 337 (472)
. + ....++..+..+|.+|+..+|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 296 (327)
T cd08227 217 QMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPD 296 (327)
T ss_pred HHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCch
Confidence 0 0 0012456788999999999999
Q ss_pred cCCCCCCCCCCC
Q 012042 338 ESGSDDEGSDDG 349 (472)
Q Consensus 338 ~R~s~~e~~~~~ 349 (472)
+|||+++.....
T Consensus 297 ~Rpt~~ell~~p 308 (327)
T cd08227 297 ARPSASTLLNHS 308 (327)
T ss_pred hcCCHHHHhcCh
Confidence 999999887654
No 223
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.92 E-value=7.5e-25 Score=219.16 Aligned_cols=224 Identities=15% Similarity=0.075 Sum_probs=159.1
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||+|+||.||+|... ++..||||+++.....- ....+.+|+.++.++
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l 95 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSS---------------------EREALMSELKIMSHL 95 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChH---------------------HHHHHHHHHHHHHhc
Confidence 567899999999999999751 35579999876332110 012356799999999
Q ss_pred -hhCCCCcceeee----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 167 -EDHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 167 -~~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
.|+++ .+.++ .+..+++|||++|++|..++... .+ ..++.+++.+|.|||+.||+|+||||.|||
T Consensus 96 ~~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil 173 (302)
T cd05055 96 GNHENI--VNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVL 173 (302)
T ss_pred cCCCCc--ceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEE
Confidence 56543 33333 26689999999999998875421 11 247789999999999999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcc-
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL- 311 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l- 311 (472)
++.++.++|+|||.+.......... .....+......+|+......++.++|+||||++++++++ +..+..
T Consensus 174 ~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~ 246 (302)
T cd05055 174 LTHGKIVKICDFGLARDIMNDSNYV-------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG 246 (302)
T ss_pred EcCCCeEEECCCcccccccCCCcee-------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCC
Confidence 9999999999999987553321100 0011122222335554456778999999999999999987 543211
Q ss_pred ---hh---hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 ---DK---EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 ---~~---~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.. .. ....++.++.++|.+|+..+|++||+..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell 295 (302)
T cd05055 247 MPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIV 295 (302)
T ss_pred CCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 00 01 1234678899999999999999999987653
No 224
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.92 E-value=1.2e-24 Score=202.45 Aligned_cols=178 Identities=44% Similarity=0.772 Sum_probs=146.3
Q ss_pred ecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhh--HHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 95 VGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKR--DYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r--~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+++.||+|+||.||+|.+.+|++||||+++.....+....... .+.....+..+..........|+.++.++.+.++.
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 1 VGGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CCcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999988899999999986654443322111 33444455566677777788999999999998899
Q ss_pred cceeeecCCceeEEeecCCC-----ChhhhhccCChHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcEEEEeCC
Q 012042 173 VPNAVDCNRHCVIMSLVQGY-----PLVQVNQLQNPDSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKVTMIDFP 246 (472)
Q Consensus 173 vP~~i~~~~~~LVMEyi~G~-----~L~~l~~~~~~~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~vkIIDFG 246 (472)
+|.++.....++||||++|+ .|...........++.+++.++.++|. +||+||||||+|||++ ++.++|+|||
T Consensus 81 ~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg 159 (187)
T cd05119 81 VPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVP 159 (187)
T ss_pred CCceEecCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECc
Confidence 99999988899999999994 444332223456789999999999999 9999999999999999 8899999999
Q ss_pred CceecCcccchhhhccccchhhhhccc
Q 012042 247 QMVSVSHQNAQMYFDRDVECIFKFFRK 273 (472)
Q Consensus 247 ~A~~~~~p~a~~~l~rD~~~i~~~f~~ 273 (472)
.|....+|....++.+|+.++.+||.+
T Consensus 160 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd05119 160 QAVEIDHPNAEEFLRRDVENINRFFRR 186 (187)
T ss_pred ccccccCcchHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999864
No 225
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.92 E-value=9e-25 Score=211.25 Aligned_cols=223 Identities=15% Similarity=0.149 Sum_probs=165.7
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+++.+.||.|++|.||+|.+. +|+.|+||+++..... . ....+.+|+..+.++.|+++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~--------------------~~~~~~~e~~~l~~l~~~~i 61 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-E--------------------FRKQLLRELKTLRSCESPYV 61 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-H--------------------HHHHHHHHHHHHHhcCCCCe
Confidence 456799999999999999995 6999999988654321 0 01235579999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++.. +..++||||++|++|..++... . ...++.+++.++.+||. .|++||||+|.||+++.++.+
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~ 139 (264)
T cd06623 62 --VKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEV 139 (264)
T ss_pred --eeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCE
Confidence 443332 6689999999999999876431 1 13478899999999999 999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||.+.......... ..+......++|+.+....++.++|+||||+++++.+++..+....
T Consensus 140 ~l~df~~~~~~~~~~~~~---------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~ 210 (264)
T cd06623 140 KIADFGISKVLENTLDQC---------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFE 210 (264)
T ss_pred EEccCccceecccCCCcc---------cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHH
Confidence 999999987654322110 1112222334555556678899999999999999999975432110
Q ss_pred ----------hhhccC-CCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----------ELAASG-FTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----------~~~~~~-~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...... ++..+.++|.+|+..+|++||+.++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 211 LMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 001223 7888999999999999999999887654
No 226
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.92 E-value=8.2e-25 Score=214.09 Aligned_cols=225 Identities=14% Similarity=0.063 Sum_probs=160.4
Q ss_pred eeecceecccCceeEEEEEeC-----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE-----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+.+.+.||+|+||.||+|... ++..||||+++..... . ....+.+|+..+..+.
T Consensus 6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~--------------------~~~~~~~ei~~l~~l~ 64 (284)
T cd05038 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-Q--------------------HRSDFEREIEILRTLD 64 (284)
T ss_pred chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-H--------------------HHHHHHHHHHHHHhCC
Confidence 345588999999999999852 3788999998643321 0 0123567999999998
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhccCC-------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQN-------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~~-------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
|+++ ++.+++ ...+++|||++|++|..++.... ...++.+++.+|.+||+.||+|+||||.||++
T Consensus 65 ~~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~ 142 (284)
T cd05038 65 HENI--VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV 142 (284)
T ss_pred CCCh--heEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE
Confidence 8654 344332 35799999999999988764221 12478899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
+.++.++|+|||.+............. .......+.++|+.+....++..+|+||||+++++++++..+...
T Consensus 143 ~~~~~~~l~dfg~~~~~~~~~~~~~~~------~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 216 (284)
T cd05038 143 ESEDLVKISDFGLAKVLPEDKDYYYVK------EPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP 216 (284)
T ss_pred cCCCCEEEcccccccccccCCcceecc------CCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence 999999999999997654221110000 001122234566655567789999999999999999986432110
Q ss_pred -hh------------------h--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 -KE------------------L--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 -~~------------------~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.. . ....++.++..++.+|+..+|++||++.+-.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~ 277 (284)
T cd05038 217 AEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLI 277 (284)
T ss_pred chhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHH
Confidence 00 0 0123456788999999999999999987654
No 227
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.92 E-value=7.6e-25 Score=211.12 Aligned_cols=219 Identities=14% Similarity=0.104 Sum_probs=156.2
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
+.||.|+||.||+|.+.+++.||+|.++..... . ....+.+|+.++.++.|+++ +.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~--------------------~~~~~~~e~~~l~~l~~~~i--~~~ 57 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-D--------------------LKRKFLQEAEILKQYDHPNI--VKL 57 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-H--------------------HHHHHHHHHHHHHhCCCCCe--EEE
Confidence 368999999999999866999999987643221 0 01234579999999988654 333
Q ss_pred ee----cCCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 177 VD----CNRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 177 i~----~~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
++ .+..++||||++|++|.+++... .. ..++.+++.+|.+||+.|++||||+|.|||++.++.++|+||
T Consensus 58 ~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~ 137 (251)
T cd05041 58 IGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDF 137 (251)
T ss_pred EEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeec
Confidence 33 26689999999999998875321 11 246779999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch-------hhh-
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD-------KEL- 315 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~-------~~~- 315 (472)
|.+........ ..... . ......| +|+....+.++.++|+||||++++++++ +..+... ..+
T Consensus 138 g~~~~~~~~~~--~~~~~---~---~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~ 209 (251)
T cd05041 138 GMSREEEGGIY--TVSDG---L---KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE 209 (251)
T ss_pred cccccccCCcc--eeccc---c---CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh
Confidence 99875432110 00000 0 0111223 3443455778999999999999999998 4322110 001
Q ss_pred ------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 316 ------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 316 ------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
....++.++++++.+|+..+|++||+++|..
T Consensus 210 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell 246 (251)
T cd05041 210 SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIY 246 (251)
T ss_pred cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 1234678899999999999999999987653
No 228
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.92 E-value=3.8e-25 Score=217.60 Aligned_cols=222 Identities=11% Similarity=0.037 Sum_probs=155.9
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||.|+||.||+|... .+..||||+.+...... .+..+.+|..++..+
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~~~~l 65 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGP---------------------LREEFKHEAMMRSRL 65 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHH---------------------HHHHHHHHHHHHhcC
Confidence 345688999999999999863 25789999886332110 012345788999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------------Ch---HHHHHHHHHHHHHHHHC
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------------NP---DSVFETIIGLVVRLAEH 220 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------------~~---~~i~~qIl~aL~~LH~~ 220 (472)
.|+++ ..+++. ...++++||+++++|..++... .. ..++.|++.+|.+||++
T Consensus 66 ~h~~i--v~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~ 143 (283)
T cd05091 66 QHPNI--VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH 143 (283)
T ss_pred CCCCc--CeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc
Confidence 88653 333332 5678999999999988765211 11 23778999999999999
Q ss_pred CceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchh
Q 012042 221 GLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLS 300 (472)
Q Consensus 221 GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~ 300 (472)
||+||||||.|||+++++.++|+|||.+............ ...+.....++|+....+.++.++|+||||+++
T Consensus 144 gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 216 (283)
T cd05091 144 HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLM-------GNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL 216 (283)
T ss_pred CccccccchhheEecCCCceEecccccccccccchheeec-------cCccCCccccCHHHHhcCCCCcchhHHHHHHHH
Confidence 9999999999999999999999999998755322110000 011111122344444567789999999999999
Q ss_pred hhhhh-ccCCcc--------hh------hhhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 301 FASIS-KTAGFL--------DK------ELAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 301 f~~~t-~~~~~l--------~~------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
+++++ +..+.. +. ...+..++..+.+++.+|++.+|++||+..+
T Consensus 217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~ 275 (283)
T cd05091 217 WEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKD 275 (283)
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHH
Confidence 99887 322110 00 0013457888999999999999999999765
No 229
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.92 E-value=4.3e-25 Score=232.05 Aligned_cols=223 Identities=15% Similarity=0.119 Sum_probs=160.5
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
.++..||+|.||+||+|.+. | .||||++.....+..++ .+++.|+.+|++-+|.+|
T Consensus 395 ~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~ql--------------------qaFKnEVa~lkkTRH~NI-- 450 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQL--------------------QAFKNEVAVLKKTRHENI-- 450 (678)
T ss_pred hccceeccccccceeecccc-c-ceEEEEEecCCCCHHHH--------------------HHHHHHHHHHhhcchhhh--
Confidence 45789999999999999885 2 69999998655444322 246689999999998653
Q ss_pred ceeeec---CCceeEEeecCCCChhhhhccCC-------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 174 PNAVDC---NRHCVIMSLVQGYPLVQVNQLQN-------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 174 P~~i~~---~~~~LVMEyi~G~~L~~l~~~~~-------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
.-+.++ ..++||..||+|.+|+.+++... ...|++||+.+|.|||.++|||||||..||++.++++|||.
T Consensus 451 lLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIg 530 (678)
T KOG0193|consen 451 LLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIG 530 (678)
T ss_pred eeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEe
Confidence 323332 44689999999999999876432 23599999999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCc----chh---
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGF----LDK--- 313 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~----l~~--- 313 (472)
|||++...+-- ..+...-...+ --..++|+.. -.-.++..||||+||+++||++++.-+. -+.
T Consensus 531 DFGLatvk~~w------~g~~q~~qp~g-silwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIif 603 (678)
T KOG0193|consen 531 DFGLATVKTRW------SGEQQLEQPHG-SLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIF 603 (678)
T ss_pred cccceeeeeee------ccccccCCCcc-chhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEE
Confidence 99998643210 00100000000 1122344432 2467899999999999999999974211 011
Q ss_pred ---------h--hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ---------E--LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ---------~--~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ...+.-.+++++++..|+..++++||.-....+
T Consensus 604 mVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 604 MVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred EecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 1 112445668999999999999999998665443
No 230
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.92 E-value=5.9e-25 Score=248.08 Aligned_cols=223 Identities=13% Similarity=0.136 Sum_probs=161.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+...||.|+||.||+|.+ .++..||+|++......-. ....+..|+.+|.+|.|++|
T Consensus 15 YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~--------------------~~~~~~~EI~IL~~L~HPNI 74 (1021)
T PTZ00266 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKER--------------------EKSQLVIEVNVMRELKHKNI 74 (1021)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHH--------------------HHHHHHHHHHHHHHcCCCCc
Confidence 67789999999999999998 4688999998864321110 01235579999999998764
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHC-------CceeccCC
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEH-------GLIHCDFN 228 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~-------GIIHrDLK 228 (472)
..+++. ...||||||++|++|..++.. ..+ ..++.||+.+|.|||.. +|||||||
T Consensus 75 --Vrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLK 152 (1021)
T PTZ00266 75 --VRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLK 152 (1021)
T ss_pred --CeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCc
Confidence 333331 347899999999999886532 122 24788999999999985 49999999
Q ss_pred CCcEEEcCC-----------------CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc--cCCCCc
Q 012042 229 EFNIMIDDD-----------------EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT--DGDDGS 289 (472)
Q Consensus 229 P~NILl~~~-----------------g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~--~~~~~~ 289 (472)
|.||||+.+ +.++|+|||++........ .....+...+++|+.+. ...++.
T Consensus 153 PeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~----------~~s~vGTp~YmAPEvL~ge~~~~s~ 222 (1021)
T PTZ00266 153 PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM----------AHSCVGTPYYWSPELLLHETKSYDD 222 (1021)
T ss_pred HHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc----------ccccCCCccccCHHHHhccCCCCCc
Confidence 999999642 3489999999975432110 01122333445566543 355889
Q ss_pred chheeccCchhhhhhhccCCcc-----hh---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 290 DIDTDEGSRLSFASISKTAGFL-----DK---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 290 ~sDiySlG~~~f~~~t~~~~~l-----~~---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++||||||+++|+++++..++. .. .+...+++.++..+|..||..+|++||++.+.+.
T Consensus 223 KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 223 KSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred hhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999999999999999764431 00 1122457889999999999999999999988764
No 231
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.92 E-value=9.2e-25 Score=211.86 Aligned_cols=221 Identities=12% Similarity=0.093 Sum_probs=155.3
Q ss_pred ceecccCceeEEEEEeC--C--CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 97 RQLGVGKESDIFEVARE--D--GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~--~--g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.||+|+||.||+|... + +..||+|.++..... . ....+.+|+.+|.++.|+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~--------------------~~~~~~~e~~~l~~l~h~~i- 58 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-A--------------------GKKEFLREASVMAQLDHPCI- 58 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-H--------------------HHHHHHHHHHHHHhcCCCCe-
Confidence 36899999999999762 2 368999987643211 0 01134578999999987653
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
...++ ....++||||+++++|.+++... .+ ..++.+++.+|.+||..|++||||||.|||++.++.++|+
T Consensus 59 -v~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~ 137 (257)
T cd05060 59 -VRLIGVCKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKIS 137 (257)
T ss_pred -eeEEEEEcCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEec
Confidence 33333 25679999999999998876422 11 3478899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCc--ch-h----h-
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGF--LD-K----E- 314 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~--l~-~----~- 314 (472)
|||.+......... ....... ......++|+......++.++|+||||+++++.++ +..+. .+ . .
T Consensus 138 df~~~~~~~~~~~~--~~~~~~~----~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05060 138 DFGMSRALGAGSDY--YRATTAG----RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211 (257)
T ss_pred cccccceeecCCcc--cccccCc----cccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 99998755321110 0000000 00011234554456778999999999999999987 44321 00 0 0
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.....++..+.++|.+|+..+|++||+..+..
T Consensus 212 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~ 249 (257)
T cd05060 212 ESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELE 249 (257)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 11234678899999999999999999987653
No 232
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.92 E-value=6.4e-25 Score=214.99 Aligned_cols=224 Identities=14% Similarity=0.196 Sum_probs=160.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh---h
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE---D 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~---~ 168 (472)
|++.+.||.|+||.||+|.+ .+|+.||||+++....... ...+.+|+.++.++. |
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~---------------------~~~~~~e~~~l~~l~~~~~ 61 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDD---------------------VSDIQREVALLSQLRQSQP 61 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchh---------------------HHHHHHHHHHHHHhccCCC
Confidence 56678899999999999998 5799999998864321100 012457889999987 3
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccCC-h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN-P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~-~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+++ ..+++ ....++||||++|++|..++.... + ..++.+++.+|.+||+.||+||||+|.||+++.++.
T Consensus 62 ~~v--i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~ 139 (277)
T cd06917 62 PNI--TKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN 139 (277)
T ss_pred CCe--eeEeeeeeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC
Confidence 322 22222 256789999999999988764321 1 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
++|+|||.+.....+... ...+.+.....+|+... +..++.++|+||||+++++++++..+....
T Consensus 140 ~~l~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~ 210 (277)
T cd06917 140 VKLCDFGVAALLNQNSSK---------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA 210 (277)
T ss_pred EEEccCCceeecCCCccc---------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh
Confidence 999999998765432210 01111222233444433 345688999999999999999875432100
Q ss_pred ----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+....++.++.++|.+|+..+|++||+..+-...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 211 MMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred hhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 01112478889999999999999999998877653
No 233
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.92 E-value=3.8e-25 Score=214.63 Aligned_cols=222 Identities=16% Similarity=0.147 Sum_probs=160.4
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
++.+.||.|++|.||+|.+. +++.||+|.+....... ....+.+|+.++.++.|+++.
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------------~~~~~~~e~~~l~~~~~~~i~ 62 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEA---------------------IQKQILRELDILHKCNSPYIV 62 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChH---------------------HHHHHHHHHHHHHHCCCCchh
Confidence 45678999999999999984 68999999886432111 112345799999999876532
Q ss_pred cce--eeecCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPN--AVDCNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~--~i~~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~vkI 242 (472)
... ....+..+++|||++|.+|.+++... .+ ..++.+++.+|.+||+ .|++|+||||.||+++.++.++|
T Consensus 63 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l 142 (265)
T cd06605 63 GFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKL 142 (265)
T ss_pred hhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEE
Confidence 111 11236789999999999998876422 12 2478899999999999 99999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---------
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--------- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--------- 313 (472)
+|||.+.....+... .+......++|+.+.+..++.++|+||||+++++++++..+....
T Consensus 143 ~d~g~~~~~~~~~~~-----------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 211 (265)
T cd06605 143 CDFGVSGQLVNSLAK-----------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE 211 (265)
T ss_pred eecccchhhHHHHhh-----------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHH
Confidence 999998654322110 022222223444445678899999999999999999865322110
Q ss_pred ---hh-------hcc-CCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ---EL-------AAS-GFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ---~~-------~~~-~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ... .++.++.++|.+|+..+|++||+..+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 212 LLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 00 111 27888999999999999999999876543
No 234
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.92 E-value=2.2e-25 Score=224.67 Aligned_cols=219 Identities=16% Similarity=0.245 Sum_probs=167.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|++.+.||+|.+|.|-+|+. ..|+.||||.++... ++...+. ..+++|+++|..|+|+
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk-----IkdeqDl--------------vhIRREIeIMSsLNHP- 113 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK-----IKDEQDL--------------VHIRREIEIMSSLNHP- 113 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh-----cccHHHH--------------HHHHHHHHHHhhcCCC-
Confidence 478889999999999999988 679999999886432 2222222 2456899999999984
Q ss_pred CCcceeeec-------CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 171 FPVPNAVDC-------NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 171 i~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
.++.. +..+|||||..|+.|++++... ....+|+||..++.|+|.++++|||||.+|||++.+
T Consensus 114 ----hII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N 189 (668)
T KOG0611|consen 114 ----HIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQN 189 (668)
T ss_pred ----ceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCC
Confidence 44432 5689999999999999987432 234599999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcc--h--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFL--D-- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l--~-- 312 (472)
+++||+|||++-.. .|-.-+.+|++.+.+.+|++..+.. -+...|-||||+.+|.++-+..++- +
T Consensus 190 ~NiKIADFGLSNly----------~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk 259 (668)
T KOG0611|consen 190 NNIKIADFGLSNLY----------ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK 259 (668)
T ss_pred CCeeeeccchhhhh----------ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH
Confidence 99999999998522 2445577899988888888876544 4678999999999998887643321 1
Q ss_pred ---hhhhc-----cCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 ---KELAA-----SGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 ---~~~~~-----~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
+.+.. ..-.+.-..+|..||.-||+.|-+.++
T Consensus 260 ~lvrQIs~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieD 299 (668)
T KOG0611|consen 260 RLVRQISRGAYREPETPSDASGLIRWMLMVNPERRATIED 299 (668)
T ss_pred HHHHHhhcccccCCCCCchHHHHHHHHHhcCcccchhHHH
Confidence 12221 112334457999999999999966543
No 235
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92 E-value=7.3e-25 Score=215.88 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=158.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+. +|..||+|.++....... ...+.+|+.+|.++.|+++
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~---------------------~~~~~~e~~~l~~~~~~~i 61 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESK---------------------FNQIIMELDILHKAVSPYI 61 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHH---------------------HHHHHHHHHHHHhcCCCcH
Confidence 456789999999999999984 799999998763211110 0134579999999987543
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc-----CCh----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-----QNP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-----~~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~ 237 (472)
+..++ .+..++||||++|++|..++.. ..+ ..++.+++.+|.|||. +||+||||||.||+++.+
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~ 139 (286)
T cd06622 62 --VDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGN 139 (286)
T ss_pred --HhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCC
Confidence 33332 2678999999999999887543 112 2478899999999996 699999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-ccccccc------CCCCcchheeccCchhhhhhhccCCc
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTD------GDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~------~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
+.++|+|||.+.....+... ......++ +|+.+.. ..++.++|+||||+++++++++..+.
T Consensus 140 ~~~~l~dfg~~~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 207 (286)
T cd06622 140 GQVKLCDFGVSGNLVASLAK------------TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPY 207 (286)
T ss_pred CCEEEeecCCcccccCCccc------------cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCC
Confidence 99999999998754322110 01111222 3443322 23588999999999999999875432
Q ss_pred c----hh-------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 311 L----DK-------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 311 l----~~-------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. .. ......++.++..+|.+|+..+|++||+.++..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 208 PPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1 00 00123478889999999999999999999877653
No 236
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.92 E-value=9.8e-25 Score=222.98 Aligned_cols=223 Identities=17% Similarity=0.168 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......... ...+.+|+.++.++.|+++
T Consensus 18 y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i 77 (353)
T cd07850 18 YQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTH--------------------AKRAYRELVLMKLVNHKNI 77 (353)
T ss_pred eEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhH--------------------HHHHHHHHHHHHhcCCCCC
Confidence 66779999999999999998 47999999987532111110 1124479999999988763
Q ss_pred Ccceeeec----------CCceeEEeecCCCChhhhhccCC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
...++. ...|+||||+.| +|...+.... ...++.|++.+|.+||..||+||||||.|||++.+
T Consensus 78 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~ 154 (353)
T cd07850 78 --IGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 154 (353)
T ss_pred --cceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC
Confidence 222221 346999999986 5555433221 23478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+.++|+|||.+........ ...+....+..+|+......++.++|+||||+++++++++...+...
T Consensus 155 ~~~kL~Dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~ 224 (353)
T cd07850 155 CTLKILDFGLARTAGTSFM----------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID 224 (353)
T ss_pred CCEEEccCccceeCCCCCC----------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence 9999999999975432111 11122223334555555677899999999999999998864321000
Q ss_pred ----------------------------------------hhh------------ccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 314 ----------------------------------------ELA------------ASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 314 ----------------------------------------~~~------------~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
.+. ....+.+..++|.+||..+|.+||+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 304 (353)
T cd07850 225 QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRIS 304 (353)
T ss_pred HHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcC
Confidence 000 0123445679999999999999999
Q ss_pred CCCCCCC
Q 012042 342 DDEGSDD 348 (472)
Q Consensus 342 ~~e~~~~ 348 (472)
+.+-..-
T Consensus 305 ~~eiL~~ 311 (353)
T cd07850 305 VDDALQH 311 (353)
T ss_pred HHHHhcC
Confidence 9998764
No 237
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=1.2e-24 Score=216.94 Aligned_cols=224 Identities=13% Similarity=0.108 Sum_probs=156.0
Q ss_pred eeecceecccCceeEEEEEe--------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHH
Q 012042 93 TAVGRQLGVGKESDIFEVAR--------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMK 164 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~--------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~ 164 (472)
|.++..||+|+||.||+|.. .++..||||....... ... ...+.+|+.++.
T Consensus 17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~--------------------~~~~~~E~~~l~ 75 (304)
T cd05101 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKD--------------------LSDLVSEMEMMK 75 (304)
T ss_pred eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHH--------------------HHHHHHHHHHHH
Confidence 56789999999999999974 1345799998753211 110 113457999999
Q ss_pred Hh-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC----------------------hHHHHHHHHHHHHHH
Q 012042 165 AL-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN----------------------PDSVFETIIGLVVRL 217 (472)
Q Consensus 165 ~L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~----------------------~~~i~~qIl~aL~~L 217 (472)
.+ .|+++ .++++. ...+++|||+++++|..++.... ...++.||+.+|.||
T Consensus 76 ~l~~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L 153 (304)
T cd05101 76 MIGKHKNI--INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL 153 (304)
T ss_pred hhccCCCc--hheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH
Confidence 98 55542 333332 56789999999999988753210 123678999999999
Q ss_pred HHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheecc
Q 012042 218 AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 218 H~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySl 296 (472)
|++||+||||||.|||++.++.++|+|||.+.......... .. ........ ++|+.+....++.++|+|||
T Consensus 154 H~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~------~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 225 (304)
T cd05101 154 ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK------KT--TNGRLPVKWMAPEALFDRVYTHQSDVWSF 225 (304)
T ss_pred HHCCeeecccccceEEEcCCCcEEECCCccceecccccccc------cc--cCCCCCceeeCchhhccCCCCchhhHHHH
Confidence 99999999999999999999999999999997654321100 00 00011122 34554456678999999999
Q ss_pred Cchhhhhhh-ccCCc----chh---hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 297 SRLSFASIS-KTAGF----LDK---EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 297 G~~~f~~~t-~~~~~----l~~---~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|++++++++ +.... ... .+ ....++..+..+|.+|+..+|++||+..+-..
T Consensus 226 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 226 GVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 999999887 32211 110 01 12346788999999999999999999876543
No 238
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.92 E-value=2e-24 Score=219.10 Aligned_cols=227 Identities=13% Similarity=0.131 Sum_probs=154.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||++... +++.||||++.... .. + + ........|..++..+.|+++
T Consensus 3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~--~--~-------------~~~~~~~~e~~~l~~~~~~~i 63 (332)
T cd05623 3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--ML--K--R-------------AETACFREERDVLVNGDNQWI 63 (332)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH--HH--H--h-------------hHHHHHHHHHHHHhhCCCCCE
Confidence 566789999999999999984 68899999874210 00 0 0 001124567888888876542
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+..+. .+..++||||++|++|..++.. ..+ ..++.||+.+|.+||++||+||||||.|||++.++.+
T Consensus 64 --~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~ 141 (332)
T cd05623 64 --TTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHI 141 (332)
T ss_pred --eeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCE
Confidence 22222 2568999999999999887642 112 2477899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
+|+|||++......... ......+....++|+.+. ...++.++|+||||+++|+++++..+....
T Consensus 142 kL~DfG~a~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 142 RLADFGSCLKLMEDGTV--------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred EEeecchheecccCCcc--------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 99999998754211110 001112333334555432 346789999999999999999976432110
Q ss_pred -----hh---------h--ccCCCHHHHHHHHHHHhcCcc--cCCCCCCCCCC
Q 012042 314 -----EL---------A--ASGFTRKDQDVIQKFIGGSIE--ESGSDDEGSDD 348 (472)
Q Consensus 314 -----~~---------~--~~~~s~~~~~~l~k~l~~~p~--~R~s~~e~~~~ 348 (472)
.+ . ...++....++|.+|+...+. .|++.++...-
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 01 0 134688889999999976444 35666555543
No 239
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92 E-value=6e-25 Score=216.79 Aligned_cols=223 Identities=16% Similarity=0.173 Sum_probs=161.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.. .+|+.||+|+....... . ....+.+|+.++..+.|+++
T Consensus 7 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~-~--------------------~~~~~~~E~~~l~~l~h~~i 65 (284)
T cd06620 7 LETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKS-S--------------------VRKQILRELQIMHECRSPYI 65 (284)
T ss_pred HHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcc-h--------------------HHHHHHHHHHHHHHcCCCCc
Confidence 45568899999999999998 46899999987643210 0 01234579999999988664
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++ .+..++||||++|++|..++... . ...++.+++.+|.|||. +|++||||+|.||+++.++.+
T Consensus 66 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~ 143 (284)
T cd06620 66 --VSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQI 143 (284)
T ss_pred --ceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcE
Confidence 33333 26689999999999998765332 1 13477899999999996 699999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--h-----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--K----- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--~----- 313 (472)
+|+|||++....+.... ...+.....+|+......++.++|+||||+++++++++..+... .
T Consensus 144 ~l~d~gl~~~~~~~~~~-----------~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~ 212 (284)
T cd06620 144 KLCDFGVSGELINSIAD-----------TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ 212 (284)
T ss_pred EEccCCcccchhhhccC-----------ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh
Confidence 99999988644222110 11222223345544567888999999999999999987543210 0
Q ss_pred -----------hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -----------EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -----------~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+ ....++.++..+|.+|+..+|++||+.+|-....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 213 DDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00 0123677889999999999999999998776543
No 240
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.92 E-value=8.7e-25 Score=213.05 Aligned_cols=218 Identities=11% Similarity=0.062 Sum_probs=152.4
Q ss_pred eecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 98 QLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.||+|+||.||+|... .+..||||+........ ....+.+|+.+|.++.|+++ .
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i--i 58 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKS---------------------VRDEMMREAEIMHQLDNPYI--V 58 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChH---------------------HHHHHHHHHHHHHhcCCCCe--E
Confidence 3899999999999763 35579999876432110 11235679999999987653 3
Q ss_pred eeee---cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVD---CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
++++ ....++||||++|++|.+++... .+ ..++.+|+.+|.+||.+|++||||||.|||++.++.++|+|
T Consensus 59 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~d 138 (257)
T cd05115 59 RMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISD 138 (257)
T ss_pred EEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEecc
Confidence 3333 25678999999999999876321 12 24788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---hh------
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---KE------ 314 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~~------ 314 (472)
||.+.......... ..+... ......++|+.+....++.++|+||||+++++.++ +..+..+ ..
T Consensus 139 fg~~~~~~~~~~~~-~~~~~~-----~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 212 (257)
T cd05115 139 FGLSKALGADDSYY-KARSAG-----KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE 212 (257)
T ss_pred CCccccccCCccce-eccCCC-----CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH
Confidence 99987443211100 000000 00112234554455678999999999999999886 4432210 00
Q ss_pred -----hhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 315 -----LAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 315 -----~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
......+.++.++|.+|+..+|++||+..+
T Consensus 213 ~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~ 247 (257)
T cd05115 213 QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAK 247 (257)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 012345788999999999999999998764
No 241
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.92 E-value=8.6e-25 Score=215.49 Aligned_cols=220 Identities=11% Similarity=0.030 Sum_probs=156.2
Q ss_pred eecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 94 AVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
.+...||+|+||.||++... ++..+|+|......... ...+.+|+.++.++.
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~----------------------~~~~~~e~~~l~~l~ 65 (280)
T cd05092 8 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA----------------------RQDFQREAELLTVLQ 65 (280)
T ss_pred eeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHH----------------------HHHHHHHHHHHhcCC
Confidence 44789999999999999642 45689999875322111 123567999999998
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccCC---------------------hHHHHHHHHHHHHHHHHCCc
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN---------------------PDSVFETIIGLVVRLAEHGL 222 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~---------------------~~~i~~qIl~aL~~LH~~GI 222 (472)
|+++ +.+++. ...+++|||+++++|..++.... ...++.+|+.++.|||++||
T Consensus 66 h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i 143 (280)
T cd05092 66 HQHI--VRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF 143 (280)
T ss_pred CCCC--ceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8754 334432 56899999999999987653211 12367899999999999999
Q ss_pred eeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhh
Q 012042 223 IHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 223 IHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
+||||||.|||+++++.++|+|||++........ ............| +|+......++.++|+||||+.++
T Consensus 144 ~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05092 144 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY--------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLW 215 (280)
T ss_pred ecccccHhhEEEcCCCCEEECCCCceeEcCCCce--------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHH
Confidence 9999999999999999999999999875432110 0000001111223 444445677899999999999999
Q ss_pred hhhh-ccCCcch---h-----h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 302 ASIS-KTAGFLD---K-----E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 302 ~~~t-~~~~~l~---~-----~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
++++ +..+..+ . . .....++..+.++|.+|+..+|++||+.++-
T Consensus 216 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l 274 (280)
T cd05092 216 EIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDI 274 (280)
T ss_pred HHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 9987 4432211 0 0 0124577889999999999999999998764
No 242
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.92 E-value=9.1e-25 Score=214.75 Aligned_cols=224 Identities=13% Similarity=0.044 Sum_probs=156.2
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||+|++|.||+|.+. .+..||+|.++...... ....+.+|+.++.++
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~---------------------~~~~~~~e~~~l~~l 66 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ---------------------DESDFLMEALIMSKF 66 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH---------------------HHHHHHHHHHHHHhC
Confidence 456789999999999999884 35679999775321111 012345789999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC-------------hHHHHHHHHHHHHHHHHCCceeccCCC
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-------------PDSVFETIIGLVVRLAEHGLIHCDFNE 229 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-------------~~~i~~qIl~aL~~LH~~GIIHrDLKP 229 (472)
.|+++ ...++. ...++||||++|++|..++.... ...++.+|+.+|.|||+.|++||||||
T Consensus 67 ~~~~i--~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp 144 (277)
T cd05036 67 NHQNI--VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAA 144 (277)
T ss_pred CCCCE--eeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccch
Confidence 87653 333332 56799999999999988753211 124788999999999999999999999
Q ss_pred CcEEEcCCC---cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-
Q 012042 230 FNIMIDDDE---KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS- 305 (472)
Q Consensus 230 ~NILl~~~g---~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t- 305 (472)
.||+++..+ .++|+|||++........ . .. ....+......+|+......++.++||||||++++++++
T Consensus 145 ~nil~~~~~~~~~~kl~dfg~~~~~~~~~~---~-~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~ 217 (277)
T cd05036 145 RNCLLTCKGPGRVAKIADFGMARDIYRASY---Y-RK---GGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL 217 (277)
T ss_pred heEEEeccCCCcceEeccCccccccCCccc---e-ec---CCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcC
Confidence 999998654 589999999875521110 0 00 001111111234554456779999999999999999886
Q ss_pred ccCCcc--------hh------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 306 KTAGFL--------DK------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 306 ~~~~~l--------~~------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+..++. +. ...+..++..+..+|.+|+..+|++|||..+..
T Consensus 218 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl 272 (277)
T cd05036 218 GYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATIL 272 (277)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 432211 00 011345778899999999999999999987643
No 243
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.92 E-value=1.1e-24 Score=212.60 Aligned_cols=227 Identities=15% Similarity=0.118 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+++.||+|+||.||+|.+ .+|..||+|.++......... .....+.+|+.++.++.|+++
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~-----------------~~~~~~~~e~~~l~~l~h~~i 66 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETS-----------------KEVSALECEIQLLKNLQHERI 66 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhH-----------------HHHHHHHHHHHHHHHcCCCCe
Confidence 56679999999999999998 468999999876432111000 011235679999999988764
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
...++. ...+++|||++|++|...+... . ...++.+++.+|.+||++||+||||+|.||+++.++.
T Consensus 67 --~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~ 144 (266)
T cd06651 67 --VQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGN 144 (266)
T ss_pred --eeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC
Confidence 222221 3468999999999998765322 1 1247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
++|+|||.+.....+... ..+.....+ ..+| +|+.+....++.++|+||||+++++++++..+....
T Consensus 145 ~~l~dfg~~~~~~~~~~~------~~~~~~~~~-~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~ 217 (266)
T cd06651 145 VKLGDFGASKRLQTICMS------GTGIRSVTG-TPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA 217 (266)
T ss_pred EEEccCCCcccccccccc------CCccccCCc-cccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH
Confidence 999999998755322110 011111222 3334 555445677889999999999999999976432110
Q ss_pred --hhh--------ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --ELA--------ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --~~~--------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+. ...++..++.+| +|+..+|++||+.++-.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 218 IFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELL 259 (266)
T ss_pred HHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHh
Confidence 000 123566677777 67778999999987653
No 244
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.92 E-value=5.2e-25 Score=216.33 Aligned_cols=222 Identities=14% Similarity=0.169 Sum_probs=158.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+. +++.||||.+......-. ....+.+|+.+|.++.|+++
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 62 (286)
T cd07846 3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKM--------------------VKKIAMREIRMLKQLRHENL 62 (286)
T ss_pred eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcch--------------------hhHHHHHHHHHHHhcCCcch
Confidence 566789999999999999985 689999998642211000 01234578999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
++++.. +..++||||+++..|..+.... . ...++.+|+.+|.|||+.||+||||+|.||++++++.++
T Consensus 63 --~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~ 140 (286)
T cd07846 63 --VNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVK 140 (286)
T ss_pred --hhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEE
Confidence 333332 5689999999999887764321 1 234788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcch-h------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLD-K------ 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~-~------ 313 (472)
|+|||.+.....+.. ....++......+|+... ...++.++|+||||+++++++++...... .
T Consensus 141 l~dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~ 211 (286)
T cd07846 141 LCDFGFARTLAAPGE---------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLY 211 (286)
T ss_pred EEeeeeeeeccCCcc---------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHH
Confidence 999999876533221 111223322233444332 24577899999999999999987532100 0
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.....+++..+.++|.+|+..+|++||+..+-
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i 280 (286)
T cd07846 212 HIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL 280 (286)
T ss_pred HHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH
Confidence 00013567788899999999999999998754
No 245
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.92 E-value=3.7e-25 Score=220.84 Aligned_cols=221 Identities=15% Similarity=0.219 Sum_probs=160.5
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
....||.|+||.||+|.+ .+++.||||++....... ...+.+|+.++..+.|+++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~----------------------~~~~~~e~~~l~~l~hp~i-- 80 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR----------------------RELLFNEVVIMRDYQHQNV-- 80 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch----------------------HHHHHHHHHHHHhCCCCch--
Confidence 345799999999999998 478999999875322111 1124568888999987653
Q ss_pred ceeee----cCCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 174 PNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 174 P~~i~----~~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
+.+++ .+..+++|||++|++|..+.... . ...++.+++.+|.+||+.||+||||+|.||+++.++.++|+|
T Consensus 81 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~d 160 (297)
T cd06659 81 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSD 160 (297)
T ss_pred hhhhhheeeCCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEee
Confidence 33333 26789999999999998875322 1 124788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h---
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E--- 314 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~--- 314 (472)
||.+........ ....+.+.....+|+......++.++|+||||+++++++++..+.... .
T Consensus 161 fg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 231 (297)
T cd06659 161 FGFCAQISKDVP---------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 231 (297)
T ss_pred chhHhhcccccc---------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 999864322111 111122222233455445667899999999999999999976432100 0
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.....++..+.++|.+|+..+|++||+.++....
T Consensus 232 ~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 232 SPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0123567788999999999999999998877664
No 246
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.92 E-value=1.1e-24 Score=211.50 Aligned_cols=221 Identities=13% Similarity=0.196 Sum_probs=157.8
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDH 169 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~ 169 (472)
-|.+.+.||+|++|.||+|.+. +++.+++|++....... ..+.+|+.++.++ .|.
T Consensus 7 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----------------------~~~~~e~~~l~~~~~h~ 63 (275)
T cd06608 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE-----------------------EEIKEEYNILRKYSNHP 63 (275)
T ss_pred heeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH-----------------------HHHHHHHHHHHHhcCCC
Confidence 3677899999999999999984 68899999986432111 1345799999998 455
Q ss_pred CCCcceeeec----------CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCC
Q 012042 170 GFPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNE 229 (472)
Q Consensus 170 gi~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP 229 (472)
+ +++.++. ...++||||++|++|.+++.. ... ..++.|++.+|.+||+.|++||||+|
T Consensus 64 ~--i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p 141 (275)
T cd06608 64 N--IATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKG 141 (275)
T ss_pred C--hheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCH
Confidence 4 3444432 126899999999998876432 111 24788999999999999999999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhh
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASI 304 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~ 304 (472)
.||+++.++.++|+|||.+......... .....+....++|+.+. ...++.++|+||||+.+++++
T Consensus 142 ~ni~~~~~~~~~l~d~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~ 212 (275)
T cd06608 142 QNILLTKNAEVKLVDFGVSAQLDSTLGR---------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA 212 (275)
T ss_pred HHEEEccCCeEEECCCccceecccchhh---------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence 9999999999999999998754321110 01112222233444321 245678999999999999999
Q ss_pred hccCCcchh---------------hhh-ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 305 SKTAGFLDK---------------ELA-ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 305 t~~~~~l~~---------------~~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
++..+..+. .+. ...++..+.++|.+|+..+|++|||.++..
T Consensus 213 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll 270 (275)
T cd06608 213 DGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELL 270 (275)
T ss_pred hCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence 875432110 001 123778899999999999999999987643
No 247
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.92 E-value=1.1e-24 Score=215.93 Aligned_cols=227 Identities=15% Similarity=0.177 Sum_probs=159.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|++|.||+|.+ .+|+.||||.++........ ......+..|+.++.++.|.++
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~-----------------~~~~~~~~~e~~~l~~~~h~~i 64 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK-----------------DGINFTALREIKLLQELKHPNI 64 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccccc-----------------chhhHHHHHHHHHHhhcCCCCC
Confidence 45678899999999999998 46899999998743211000 0001134568999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccCC-------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN-------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~-------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++ .+..++||||+ +++|..++.... ...++.||+.+|.+||.+||+||||+|.|||++.++.+
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~ 141 (298)
T cd07841 65 --IGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVL 141 (298)
T ss_pred --hhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCE
Confidence 33332 25679999999 888888764322 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCcc-----h--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGFL-----D-- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~l-----~-- 312 (472)
+|+|||.+.....+... ...........+|+.. ....++.++|+||||+++++++++..... +
T Consensus 142 ~l~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~ 212 (298)
T cd07841 142 KLADFGLARSFGSPNRK---------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL 212 (298)
T ss_pred EEccceeeeeccCCCcc---------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH
Confidence 99999999765432110 0111111122334432 23457889999999999999988742110 0
Q ss_pred -hh---------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 313 -KE---------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 313 -~~---------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.. ..-...+.++.++|.+|+..+|++|||+.+...-
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 213 GKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00 0002346778899999999999999999887763
No 248
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=2.1e-24 Score=207.18 Aligned_cols=223 Identities=13% Similarity=0.165 Sum_probs=163.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|++|.||+|.+. +++.|+||.+......-. ....+.+|+.++.++.|+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 61 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEE--------------------ALKSIMQEIDLLKNLKHPNI 61 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHH--------------------HHHHHHHHHHHHHhCCCCCc
Confidence 567799999999999999884 688999998864321100 11245679999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..+++|||++|.+|.+++... .+ ..++.+++.++.+||+.||+||||+|.||+++.++.++
T Consensus 62 --~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~ 139 (254)
T cd06627 62 --VKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVK 139 (254)
T ss_pred --cEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEE
Confidence 33333 26689999999999998876432 11 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--h------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--K------ 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--~------ 313 (472)
|+|||.+......... .....+.....+|+.+.....+.++|+||+|+++++++++..+... .
T Consensus 140 l~d~~~~~~~~~~~~~---------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (254)
T cd06627 140 LADFGVATKLNDVSKD---------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR 210 (254)
T ss_pred EeccccceecCCCccc---------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 9999999866432211 1111222223345444455688999999999999999987543211 0
Q ss_pred ------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+..+|.+|+..+|++||+..+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 249 (254)
T cd06627 211 IVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLL 249 (254)
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHh
Confidence 001245778899999999999999999986643
No 249
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.92 E-value=8.3e-25 Score=212.00 Aligned_cols=219 Identities=16% Similarity=0.125 Sum_probs=159.5
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|+||.||+|.+. ++..||+|++........ + ....+.+|+.++.++.|+++
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--~-----------------~~~~~~~e~~~l~~l~h~~i 62 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEK--G-----------------SVRNVLNERRILQELNHPFL 62 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcch--h-----------------HHHHHHHHHHHHHhCCCCCh
Confidence 567899999999999999984 699999998863211000 0 01235579999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. ....++||||+.|++|...+... .+ ..++.+|+.+|.+||.+|++|+||+|.||+++.++.++
T Consensus 63 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~ 140 (258)
T cd05578 63 --VNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVH 140 (258)
T ss_pred --HHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEE
Confidence 33222 25689999999999998876432 11 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--h-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--D------- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~------- 312 (472)
|+|||.+........ .....+....++|+......++.++|+||||+++++.+++..+.. .
T Consensus 141 l~d~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 141 ITDFNIATKVTPDTL----------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred EeecccccccCCCcc----------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 999999875432210 001111222234554455668999999999999999998754321 1
Q ss_pred -------hhhhccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 313 -------KELAASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 313 -------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
....+..++..+.++|.+|+..+|.+||+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 211 RAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGD 247 (258)
T ss_pred HHHhccccccCcccCcHHHHHHHHHHccCChhHcCCc
Confidence 011234577889999999999999999998
No 250
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.92 E-value=1.1e-24 Score=210.87 Aligned_cols=220 Identities=15% Similarity=0.109 Sum_probs=156.8
Q ss_pred ceecccCceeEEEEEeC--CCC--EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 97 RQLGVGKESDIFEVARE--DGT--VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~--~g~--~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.||+|++|.||+|.+. .++ .||||+++..... . ....+.+|+.++.++.|+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~--------------------~~~~~~~e~~~l~~l~h~~i- 58 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-D--------------------IMDDFLKEAAIMHSLDHENL- 58 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-H--------------------HHHHHHHHHHHHhhcCCCCc-
Confidence 36899999999999873 333 6999988644321 1 11235579999999998764
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccCC----h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQN----P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~~----~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..+++ ....++||||+++++|.+.+.... + ..++.+++.+|.+||..|++||||+|.||+++.++.++
T Consensus 59 -v~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~k 137 (257)
T cd05040 59 -IRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVK 137 (257)
T ss_pred -cceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEE
Confidence 22222 267899999999999988753221 1 23678999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccc-cccCCCCcchheeccCchhhhhhh-ccCCcc-----h--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQE-TTDGDDGSDIDTDEGSRLSFASIS-KTAGFL-----D-- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~-~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l-----~-- 312 (472)
|+|||.+.....+.... .........++|.+++ .....++.++|+||||++++++++ +..+.. +
T Consensus 138 l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~ 210 (257)
T cd05040 138 IGDFGLMRALPQNEDHY-------VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL 210 (257)
T ss_pred eccccccccccccccce-------ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999998654322110 0111122234454444 355778999999999999999987 543210 0
Q ss_pred hhh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 KEL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ~~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+ ....++..+.+++.+|+..+|++|||..+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~ 252 (257)
T cd05040 211 KKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALR 252 (257)
T ss_pred HHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHH
Confidence 000 1234668889999999999999999987653
No 251
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.92 E-value=1.5e-24 Score=209.63 Aligned_cols=219 Identities=13% Similarity=0.058 Sum_probs=157.5
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||.|+||.||+|.+.++..+|||.++..... ...+.+|+.++.++.|+++
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~-----------------------~~~~~~e~~~l~~l~~~~i- 61 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS-----------------------EEDFIEEAQVMMKLSHPKL- 61 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC-----------------------HHHHHHHHHHHHhCCCCCe-
Confidence 4567889999999999998876889999987533211 0124479999999987653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+..++. ...++||||++|++|..++... .+ ..++.+++.++.+||+.|++||||||.||+++.++.++
T Consensus 62 -~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~ 140 (256)
T cd05112 62 -VQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVK 140 (256)
T ss_pred -eeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEE
Confidence 334432 5678999999999998875321 12 23677999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch---h---
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K--- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~--- 313 (472)
|+|||.+....++... ...... ...+| +|+....+.++.++|+||||++++++++ +..+... .
T Consensus 141 l~d~g~~~~~~~~~~~--------~~~~~~-~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 211 (256)
T cd05112 141 VSDFGMTRFVLDDQYT--------SSTGTK-FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVV 211 (256)
T ss_pred ECCCcceeecccCccc--------ccCCCc-cchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 9999998755322110 000001 11234 4443355778899999999999999887 4332110 0
Q ss_pred -h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. ......+..+.+++.+|+..+|++||+..+-
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~ 251 (256)
T cd05112 212 ETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLL 251 (256)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 0 1123467788999999999999999998764
No 252
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.92 E-value=1e-24 Score=211.53 Aligned_cols=222 Identities=14% Similarity=0.010 Sum_probs=153.1
Q ss_pred ceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 97 RQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.||+|+||.||+|... ++..||||.+..... ... ...+.+|+.+++.+.|+++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~--------------------~~~~~~e~~~l~~l~h~~iv 59 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEE--------------------VEQFLKEGIIMKDFSHPNVL 59 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHH--------------------HHHHHHHHHHHccCCCCCcc
Confidence 36899999999999863 245799997642111 100 11344688899999887642
Q ss_pred cceeee-----cCCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVD-----CNRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~-----~~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
.+++ .+..+++|||+.+++|..++... .. ..++.+++.+|.|||+.||+||||||.|||+++++.+
T Consensus 60 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~ 137 (262)
T cd05058 60 --SLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTV 137 (262)
T ss_pred --eEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcE
Confidence 2222 14578999999999998875321 11 2366799999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc---hh----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL---DK---- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l---~~---- 313 (472)
+|+|||.+.....+..... ............++|+.+....++.++||||||+++++++++...+. +.
T Consensus 138 kl~dfg~~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~ 212 (262)
T cd05058 138 KVADFGLARDIYDKEYYSV-----HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDIT 212 (262)
T ss_pred EECCccccccccCCcceee-----cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999999875432211000 00000111112335555556778999999999999999988432211 00
Q ss_pred --------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.+++.+|+..+|++||+..+-.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il 253 (262)
T cd05058 213 VYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELV 253 (262)
T ss_pred HHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 011234678899999999999999999987654
No 253
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.92 E-value=3.8e-25 Score=220.25 Aligned_cols=220 Identities=13% Similarity=0.199 Sum_probs=159.9
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
...||.|+||.||++.+ .++..||||.+...... ....+.+|+.++..+.|+++ .
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~~i--i 82 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ----------------------RRELLFNEVVIMRDYHHENV--V 82 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHH----------------------HHHHHHHHHHHHHhCCCCcH--H
Confidence 35699999999999988 46899999987532110 01234578999999987653 2
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
.+++ .+..++||||++|++|..++... ....++.+|+.+|.+||++||+||||||.||+++.++.++|+||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~df 162 (292)
T cd06658 83 DMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDF 162 (292)
T ss_pred HHHHheecCCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccC
Confidence 2222 36789999999999998875322 12347889999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh---
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL--- 315 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~--- 315 (472)
|.+....... .....+.+..+..+|+......++.++|+||||+++++++++..+.... .+
T Consensus 163 g~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~ 233 (292)
T cd06658 163 GFCAQVSKEV---------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN 233 (292)
T ss_pred cchhhccccc---------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 9986442211 1111223333444555555667899999999999999999976432110 00
Q ss_pred ------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 316 ------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 316 ------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
....++..++.+|.+|+..+|.+||++++-..-
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 234 LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 012357778899999999999999999877653
No 254
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.92 E-value=9.2e-25 Score=210.55 Aligned_cols=219 Identities=13% Similarity=0.155 Sum_probs=161.0
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|... +++.|++|.++.... ...+.+|+.++.++.|+++
T Consensus 5 y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------------------------~~~~~~e~~~~~~l~~~~i 60 (256)
T cd06612 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------------------------LQEIIKEISILKQCDSPYI 60 (256)
T ss_pred chhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------------------------HHHHHHHHHHHHhCCCCcE
Confidence 566788999999999999985 489999998753211 1135579999999977653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++ ....|++|||++|++|.+++... .+ ..++.+++.++.+||..||+||||+|.||+++.++.+
T Consensus 61 --~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~ 138 (256)
T cd06612 61 --VKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQA 138 (256)
T ss_pred --eeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcE
Confidence 33333 25688999999999998876321 11 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----h---
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----K--- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~--- 313 (472)
+|+|||.+.....+.... ....+.....+|+...+..++.++|+||||+++++++++..+.-. .
T Consensus 139 ~l~dfg~~~~~~~~~~~~---------~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 139 KLADFGVSGQLTDTMAKR---------NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred EEcccccchhcccCcccc---------ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh
Confidence 999999988654332110 001122222345544566788999999999999999987543210 0
Q ss_pred hh---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 EL---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ~~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ ....++..+.++|.+|++.+|++||+..+-.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il 251 (256)
T cd06612 210 MIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLL 251 (256)
T ss_pred hhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHh
Confidence 00 0124667889999999999999999987644
No 255
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.92 E-value=1.1e-24 Score=214.11 Aligned_cols=224 Identities=11% Similarity=0.125 Sum_probs=161.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
+|.+.+.||.|+||.||+|.+ .++..||||+....... .. ...+.+|+.++.++.|++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~--------------------~~~~~~e~~~l~~l~h~~ 63 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DE--------------------IEDIQQEITVLSQCDSPY 63 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HH--------------------HHHHHHHHHHHHhcCCCC
Confidence 355678899999999999988 46899999987532110 00 013457899999998765
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+ ...++ ....++||||++|++|..++... . ...++.+++.++.+||+.|++|+||+|.||+++.++.++
T Consensus 64 i--v~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~ 141 (277)
T cd06641 64 V--TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 141 (277)
T ss_pred E--eEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEE
Confidence 3 33332 26689999999999998876432 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||++........ ......+..+..+|+......++.++|+||||+.+++.+++..+.... .
T Consensus 142 l~dfg~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 212 (277)
T cd06641 142 LADFGVAGQLTDTQI---------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212 (277)
T ss_pred Eeecccceecccchh---------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence 999999875532110 001112222334555445567888999999999999999876432110 0
Q ss_pred h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 ~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+ ....++.++.++|.+|+..+|++||+..+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 213 IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred HhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 12346778899999999999999999877654
No 256
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-26 Score=220.35 Aligned_cols=220 Identities=18% Similarity=0.231 Sum_probs=169.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++-+.||+|.|+.||++.+ ++|+.+|+|++.... |.. + .-..+.+|+++-..|+|
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k--~~~----------~--------~~e~l~rEarIC~~LqH--- 69 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSA----------R--------DFQKLEREARICRKLQH--- 69 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhh--hcc----------c--------cHHHHHHHHHHHHhcCC---
Confidence 56678999999999999988 689999999875322 110 0 01235689999999987
Q ss_pred Ccceeeec-------CCceeEEeecCCCChhhhh-cc-----CChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC-
Q 012042 172 PVPNAVDC-------NRHCVIMSLVQGYPLVQVN-QL-----QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD- 237 (472)
Q Consensus 172 ~vP~~i~~-------~~~~LVMEyi~G~~L~~l~-~~-----~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~- 237 (472)
|+++.. +.+|||+|+++|+.|..-+ .. .......+||+++|.|+|.+||||||+||.|+|+...
T Consensus 70 --P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~ 147 (355)
T KOG0033|consen 70 --PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKA 147 (355)
T ss_pred --CcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeecc
Confidence 454442 6789999999999987633 21 1234588999999999999999999999999999633
Q ss_pred --CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 238 --EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 238 --g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
..+||+|||.|+.+... .....+.+.+..++|++.....++..+|||+.|+++|-++.+..++.+.
T Consensus 148 ~~A~vKL~~FGvAi~l~~g----------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~ 217 (355)
T KOG0033|consen 148 KGAAVKLADFGLAIEVNDG----------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 217 (355)
T ss_pred CCCceeecccceEEEeCCc----------cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH
Confidence 34899999999987522 2233456666667888777899999999999999999999987655431
Q ss_pred -----hhh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----ELA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+. -+.++.+-++++.+||..||.+|.|+.|-+.
T Consensus 218 ~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 218 HRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 111 1457888899999999999999999987665
No 257
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92 E-value=9.1e-25 Score=215.87 Aligned_cols=222 Identities=14% Similarity=0.160 Sum_probs=153.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh-CC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED-HG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~-~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||..+.....-. ....+.+|+.++.++.+ ++
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~~~~~ 62 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEG--------------------IPPTALREISLLQMLSESIY 62 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccC--------------------CchHHHHHHHHHHHccCCCC
Confidence 56678999999999999998 4799999998754211100 00134579999999965 33
Q ss_pred CCcceeeec----CC-----ceeEEeecCCCChhhhhccC-----------ChHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 171 FPVPNAVDC----NR-----HCVIMSLVQGYPLVQVNQLQ-----------NPDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 171 i~vP~~i~~----~~-----~~LVMEyi~G~~L~~l~~~~-----------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
+++++.. .. .|+||||++| +|.+++... ....++.+|+.+|.|||..||+||||+|.
T Consensus 63 --i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~ 139 (295)
T cd07837 63 --IVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQ 139 (295)
T ss_pred --ccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChH
Confidence 2333332 22 6899999997 566553210 11247889999999999999999999999
Q ss_pred cEEEcC-CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccC
Q 012042 231 NIMIDD-DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 231 NILl~~-~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
||+++. ++.++|+|||.+.....+.... ..........+|+... ...++.++|+||||+++++++++..
T Consensus 140 nil~~~~~~~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 210 (295)
T cd07837 140 NLLVDKQKGLLKIADLGLGRAFSIPVKSY---------THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQP 210 (295)
T ss_pred HEEEecCCCeEEEeecccceecCCCcccc---------CCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCC
Confidence 999998 8899999999987654321110 0001111223444332 3457899999999999999998753
Q ss_pred Ccchh---------------------------------------h--hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 309 GFLDK---------------------------------------E--LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 309 ~~l~~---------------------------------------~--~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..... . .....++.++.++|.+|+..+|.+||++++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 211 LFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence 22100 0 00134778889999999999999999987654
No 258
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.92 E-value=2.5e-24 Score=210.25 Aligned_cols=224 Identities=12% Similarity=0.097 Sum_probs=156.2
Q ss_pred eeecceecccCceeEEEEEeC-CCC---EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGT---VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~---~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+.+.+.||+|+||.||+|... ++. .||||+...... .. ....+..|+.++.++.|
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~-~~--------------------~~~~~~~e~~~l~~l~h 64 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT-EK--------------------QRRDFLSEASIMGQFDH 64 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC-HH--------------------HHHHHHHHHHHHHhCCC
Confidence 567899999999999999874 343 699998753211 00 01234579999999988
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ +.+++. ...++||||++|++|..++... .. ..++.+++.+|.+||++|++||||||.||+++.+
T Consensus 65 ~ni--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~ 142 (269)
T cd05065 65 PNI--IHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSN 142 (269)
T ss_pred cCc--ceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCC
Confidence 764 333332 5679999999999998875421 11 2477899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcchh--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLDK-- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~~-- 313 (472)
+.++|+|||.+.................. . ..+.| +|+......++.++|+||||+++++.++ +..+....
T Consensus 143 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~----~-~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 143 LVCKVSDFGLSRFLEDDTSDPTYTSSLGG----K-IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred CcEEECCCccccccccCccccccccccCC----C-cceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH
Confidence 99999999998754321111000000000 0 01223 4444456778999999999999999776 43322110
Q ss_pred -----------h-hhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 314 -----------E-LAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 314 -----------~-~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
. .....++..+.+++.+|+..+|.+||+.++
T Consensus 218 ~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (269)
T cd05065 218 QDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQ 260 (269)
T ss_pred HHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 0 012345778899999999999999999864
No 259
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.92 E-value=1.9e-24 Score=213.20 Aligned_cols=223 Identities=14% Similarity=0.085 Sum_probs=153.4
Q ss_pred eeecceecccCceeEEEEEe-CCCC----EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGT----VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~----~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+.+.+.||.|+||.||+|.+ .+|+ .|++|....... .. ....+..|+..+.++.
T Consensus 9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~--~~-------------------~~~~~~~~~~~l~~l~ 67 (279)
T cd05111 9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG--RQ-------------------TFQEITDHMLAMGSLD 67 (279)
T ss_pred ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc--hH-------------------HHHHHHHHHHHHhcCC
Confidence 35578999999999999987 4565 467776542110 00 0012346777788887
Q ss_pred hCCCCcceeeec---CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ .+.+++ ...+++|||+++++|.+++... .. ..++.||+.+|.|||+.|++||||||.|||++.+
T Consensus 68 h~~i--v~~~~~~~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~ 145 (279)
T cd05111 68 HAYI--VRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD 145 (279)
T ss_pred CCCc--ceEEEEECCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC
Confidence 7653 333332 5568999999999998876421 11 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcc--h-
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL--D- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l--~- 312 (472)
+.++|+|||.+...... .... .........+| +|+....+.++.++|+||||+++++.++ +..+.- .
T Consensus 146 ~~~kl~Dfg~~~~~~~~-~~~~-------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~ 217 (279)
T cd05111 146 SIVQIADFGVADLLYPD-DKKY-------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP 217 (279)
T ss_pred CcEEEcCCccceeccCC-Cccc-------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999998754211 1100 01112223334 4443356778999999999999999987 543211 0
Q ss_pred h---hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 K---EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ~---~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .+ .....+..+..++.+|+..+|++|||..|..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~ 262 (279)
T cd05111 218 HEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELA 262 (279)
T ss_pred HHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 0 00 1123456778899999999999999998754
No 260
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.92 E-value=1.8e-24 Score=208.45 Aligned_cols=222 Identities=14% Similarity=0.118 Sum_probs=160.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|++|.||+|.. .+++.+|||.+......... ...+.+|+.+|+++.|+++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~--------------------~~~~~~e~~~l~~~~~~~i 61 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDE--------------------RLAAQNECQVLKLLSHPNI 61 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHH--------------------HHHHHHHHHHHhhCCCCch
Confidence 56778999999999999988 46899999988643211110 1235679999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC-C
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD-E 238 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~-g 238 (472)
+.+++ .+..++||||++|++|.+++... .+ ..++.+++.+|.+||++||+||||+|.||+++.+ +
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~ 139 (256)
T cd08220 62 --IEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM 139 (256)
T ss_pred --hheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence 22332 26689999999999998876321 11 2377899999999999999999999999999854 4
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||.+......... ....+.....+|+.......+.++|+||||+++++++++.......
T Consensus 140 ~~~l~d~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~ 209 (256)
T cd08220 140 VVKIGDFGISKILSSKSKA----------YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL 209 (256)
T ss_pred EEEEccCCCceecCCCccc----------cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH
Confidence 5799999999866432111 1112222233555545567889999999999999998864322100
Q ss_pred --hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ ....++..+.++|.+|+..+|.+||+.++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll 251 (256)
T cd08220 210 VLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIM 251 (256)
T ss_pred HHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 00 1235788899999999999999999987654
No 261
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.92 E-value=2.8e-24 Score=212.47 Aligned_cols=219 Identities=12% Similarity=0.113 Sum_probs=154.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.. .+++.+|||+....... .....+|+.++.++ .|++
T Consensus 24 y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~-----------------------~~~~~~e~~~l~~l~~h~n 80 (291)
T cd06639 24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV-----------------------DEEIEAEYNILQSLPNHPN 80 (291)
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccH-----------------------HHHHHHHHHHHHHhcCCCC
Confidence 67788999999999999998 56899999987532110 01234688888888 4543
Q ss_pred CCcceeeec---------CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 171 FPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 171 i~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
++..++. +..++||||++|++|.+++.. ..+ ..++.+++.+|.+||+.||+||||||.|
T Consensus 81 --i~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~n 158 (291)
T cd06639 81 --VVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNN 158 (291)
T ss_pred --eEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence 3343331 357999999999999876431 111 2378899999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-ccccccc-----CCCCcchheeccCchhhhhhh
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTD-----GDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~-----~~~~~~sDiySlG~~~f~~~t 305 (472)
|+++.++.++|+|||.+.......... . .......| +|+.... ..++.++|+||||++++++++
T Consensus 159 ili~~~~~~kl~dfg~~~~~~~~~~~~-------~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~ 228 (291)
T cd06639 159 ILLTTEGGVKLVDFGVSAQLTSTRLRR-------N---TSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD 228 (291)
T ss_pred EEEcCCCCEEEeecccchhcccccccc-------c---CccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhh
Confidence 999999999999999987543211100 0 01112223 3433211 236889999999999999998
Q ss_pred ccCCcchh-------hh---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 306 KTAGFLDK-------EL---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 306 ~~~~~l~~-------~~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+..+.... .+ ....++..+.++|.+|++.+|++||+..+-.
T Consensus 229 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il 285 (291)
T cd06639 229 GDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLL 285 (291)
T ss_pred CCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence 76432110 01 0224566788999999999999999987654
No 262
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.92 E-value=1.8e-24 Score=208.14 Aligned_cols=221 Identities=14% Similarity=0.123 Sum_probs=159.1
Q ss_pred eecceecccCceeEEEEEeCC-C----CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 94 AVGRQLGVGKESDIFEVARED-G----TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~-g----~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
.+.+.||.|+||.||+|.+.. + ..||+|+++.....- ....+..|+..|..+.|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~~ 60 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ---------------------QIEEFLREARIMRKLDH 60 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH---------------------HHHHHHHHHHHHHhcCC
Confidence 356889999999999999843 4 889999986432110 01134579999999977
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+++ +..+.. +..+++|||++|++|.+++... .+ ..++.+++.+|.+||+.|++||||+|.||+++.
T Consensus 61 ~~i--~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~ 138 (258)
T smart00219 61 PNI--VKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE 138 (258)
T ss_pred Cch--heEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc
Confidence 653 444432 5689999999999998875422 11 247889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcc--hh
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFL--DK 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l--~~ 313 (472)
++.++|+|||.+........ ...+. .. .....++|+......++.++|+||+|++++++++ +..+.. ..
T Consensus 139 ~~~~~l~dfg~~~~~~~~~~---~~~~~----~~-~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~ 210 (258)
T smart00219 139 NLVVKISDFGLSRDLYDDDY---YKKKG----GK-LPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN 210 (258)
T ss_pred CCeEEEcccCCceecccccc---ccccc----CC-CcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999976543311 11110 00 1112234554456778999999999999999987 322111 00
Q ss_pred ------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
......++..+.+++.+|+..+|++|||..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 254 (258)
T smart00219 211 EEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSEL 254 (258)
T ss_pred HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHH
Confidence 01134578899999999999999999998764
No 263
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=1.9e-24 Score=216.09 Aligned_cols=225 Identities=14% Similarity=0.089 Sum_probs=156.8
Q ss_pred eeecceecccCceeEEEEEeC--------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHH
Q 012042 93 TAVGRQLGVGKESDIFEVARE--------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMK 164 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~--------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~ 164 (472)
|.+++.||+|+||.||+|.+. ++..+|+|+++....... ...+..|+.++.
T Consensus 20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~---------------------~~~~~~e~~~l~ 78 (307)
T cd05098 20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKD---------------------LSDLISEMEMMK 78 (307)
T ss_pred eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHH---------------------HHHHHHHHHHHH
Confidence 677899999999999999752 235699998864321110 012446899999
Q ss_pred Hh-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC------------------Ch----HHHHHHHHHHHHHH
Q 012042 165 AL-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------------------NP----DSVFETIIGLVVRL 217 (472)
Q Consensus 165 ~L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------------------~~----~~i~~qIl~aL~~L 217 (472)
++ .|++ ++..++. +..++||||+++++|..++... .+ ..++.+++.+|.+|
T Consensus 79 ~l~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l 156 (307)
T cd05098 79 MIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL 156 (307)
T ss_pred HhcCCCC--EeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 98 4543 3344432 6689999999999998876321 11 24788999999999
Q ss_pred HHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccC
Q 012042 218 AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGS 297 (472)
Q Consensus 218 H~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG 297 (472)
|++|++||||||.|||++.++.++|+|||.+....+.... ...... .......+|+......++.++|+||||
T Consensus 157 H~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~---~~~~~~----~~~~~y~aPE~~~~~~~~~~~DvwslG 229 (307)
T cd05098 157 ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY---KKTTNG----RLPVKWMAPEALFDRIYTHQSDVWSFG 229 (307)
T ss_pred HHCCcccccccHHheEEcCCCcEEECCCcccccccccchh---hccccC----CCccceeChHHhccCCCCcHHHHHHHH
Confidence 9999999999999999999999999999998754322110 000000 001112345544567789999999999
Q ss_pred chhhhhhh-ccCCc----chh---h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 298 RLSFASIS-KTAGF----LDK---E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 298 ~~~f~~~t-~~~~~----l~~---~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++++++++ +..+. .+. . .....++.++..+|.+|+..+|++||+..+-.+
T Consensus 230 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 230 VLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999987 43221 100 0 012346788999999999999999999876543
No 264
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.92 E-value=1.8e-24 Score=210.28 Aligned_cols=230 Identities=15% Similarity=0.134 Sum_probs=161.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|..++.||+|++|.||+|.+ .+++.||||+++.....-.. .. .....+.+|+.+|+++.|+++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~---~~-------------~~~~~~~~e~~~l~~l~h~~i 65 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE---QE-------------EVVEALRKEIRLMARLNHPHI 65 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh---HH-------------HHHHHHHHHHHHHHHcCCCce
Confidence 45578899999999999988 57899999988633211100 00 011245689999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccCC--h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC-cE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN--P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE-KV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~--~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g-~v 240 (472)
+..++ .+..++||||++|++|..++.... + ..++.+++.+|.+||++|++|+||+|.||+++.++ .+
T Consensus 66 --v~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~ 143 (268)
T cd06630 66 --IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRL 143 (268)
T ss_pred --ehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 23232 266799999999999988764321 1 24789999999999999999999999999998665 58
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcc--h-----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--D----- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~----- 312 (472)
+|+|||.+.....+.... ......+...+.+ +|+.+....++.++|+||+|+++++++++..+.. +
T Consensus 144 ~l~dfg~~~~~~~~~~~~------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 217 (268)
T cd06630 144 RIADFGAAARLAAKGTGA------GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL 217 (268)
T ss_pred EEcccccccccccccccC------CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH
Confidence 999999987654331100 0001111122334 4554455678899999999999999998754321 0
Q ss_pred hhh-----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 KEL-----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ~~~-----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+ ....++..+.++|.+|+..+|++||+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 218 ALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred HHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 000 1124667888999999999999999987754
No 265
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=6.7e-26 Score=237.80 Aligned_cols=217 Identities=16% Similarity=0.190 Sum_probs=165.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
.+|.+.||-|+||.||+|... ++-..|-|++.... - ....+|+ -|+.+|..+.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks--e---EELEDyl-----------------VEIeILa~CdH--- 88 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS--E---EELEDYL-----------------VEIEILAECDH--- 88 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc--h---hHHhhhh-----------------hhhhhhhcCCC---
Confidence 456688999999999999885 45567777765321 1 1233443 58999998886
Q ss_pred Ccceeee-------cCCceeEEeecCCCChhhhh-ccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD-------CNRHCVIMSLVQGYPLVQVN-QLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~-------~~~~~LVMEyi~G~~L~~l~-~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|.++. -+..+|+.|||.||....++ .+. ....++.+++.+|.|||+.+|||||||.+|||++-+
T Consensus 89 --P~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld 166 (1187)
T KOG0579|consen 89 --PVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD 166 (1187)
T ss_pred --hHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec
Confidence 44333 27789999999999877653 221 223589999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-----ccCCCCcchheeccCchhhhhhhccCCc--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-----TDGDDGSDIDTDEGSRLSFASISKTAGF-- 310 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-----~~~~~~~~sDiySlG~~~f~~~t~~~~~-- 310 (472)
|.|+|+|||.+.... ...-.|| .|.+++|.++|+.. ....|++++||||||+++.++....++.
T Consensus 167 GdirLADFGVSAKn~----~t~qkRD-----sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe 237 (1187)
T KOG0579|consen 167 GDIRLADFGVSAKNK----STRQKRD-----SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE 237 (1187)
T ss_pred CcEeeecccccccch----hHHhhhc-----cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence 999999999875322 2223344 57788999888764 4588999999999999999988764432
Q ss_pred ch--------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 311 LD--------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 311 l~--------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+. .-+.++.|+..|.++|.+||..||..||++.+.
T Consensus 238 lnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaql 286 (1187)
T KOG0579|consen 238 LNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQL 286 (1187)
T ss_pred cchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHH
Confidence 11 123468899999999999999999999987543
No 266
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.92 E-value=5.4e-25 Score=214.16 Aligned_cols=213 Identities=13% Similarity=0.069 Sum_probs=148.2
Q ss_pred ceecccCceeEEEEEeC-CC-------CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 97 RQLGVGKESDIFEVARE-DG-------TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~-~g-------~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+.||.|+||.||+|... .+ ..||+|......... ...+..|..+|..+.|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~----------------------~~~~~~e~~~l~~~~h 58 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNY----------------------SESFFEAASMMSQLSH 58 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHH----------------------HHHHHHHHHHHHhCCC
Confidence 36899999999999873 23 237777653221100 1134468888999887
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ ...++ ....++||||++|++|..++... .. ..++.||+.+|.|||+.||+||||||.|||++.+
T Consensus 59 ~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~ 136 (258)
T cd05078 59 KHL--VLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIRE 136 (258)
T ss_pred CCh--hheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecc
Confidence 653 33332 26789999999999998876422 11 2478899999999999999999999999999876
Q ss_pred Cc--------EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccC
Q 012042 238 EK--------VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 238 g~--------vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
+. ++++|||.+.....+ + .+.+...+++|+.+.. ..++.++|+||||+++|+++++..
T Consensus 137 ~~~~~~~~~~~~l~d~g~~~~~~~~--------~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~ 203 (258)
T cd05078 137 EDRKTGNPPFIKLSDPGISITVLPK--------E-----ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGD 203 (258)
T ss_pred cccccCCCceEEecccccccccCCc--------h-----hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 54 689999988643211 0 1122222345554433 457899999999999999998732
Q ss_pred Cc---chh----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 309 GF---LDK----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 309 ~~---l~~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ .+. ...+..++.++.++|.+|++.+|++|||.++-.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 254 (258)
T cd05078 204 KPLSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAII 254 (258)
T ss_pred CChhhccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHH
Confidence 21 110 011235667889999999999999999987643
No 267
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.92 E-value=1.4e-24 Score=213.42 Aligned_cols=222 Identities=13% Similarity=0.143 Sum_probs=155.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|++|.||+|.+ .+|+.||||.++....... ....+.+|+.++.++.|+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 61 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG--------------------VPSTAIREISLLKELNHPNI 61 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccc--------------------cchHHHHHHHHHHhcCCCCC
Confidence 45678999999999999998 4699999998763321110 01134579999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
.++++ .+..++||||+.+ +|..++... . ...++.+++.+|.|||..|++||||+|.||+++.++.
T Consensus 62 --~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~ 138 (284)
T cd07860 62 --VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 138 (284)
T ss_pred --cchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC
Confidence 33333 2668999999974 666654221 1 1247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
++|+|||.+.....+... ...........+|+...+ ..++.++|+||||+++++++|+..+....
T Consensus 139 ~~l~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~ 209 (284)
T cd07860 139 IKLADFGLARAFGVPVRT---------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 209 (284)
T ss_pred EEEeeccchhhcccCccc---------cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999998654322110 011111222334443333 34688999999999999999975422100
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++.++.++|.+|++.+|.+||++++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 210 LFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred HHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 000124677888999999999999999987654
No 268
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.92 E-value=1.8e-24 Score=212.71 Aligned_cols=214 Identities=16% Similarity=0.128 Sum_probs=153.0
Q ss_pred ecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||+|+||.||+|.+ .+|+.||||++........ . ....+..|+.+|.+++|+++ +..+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~--~-----------------~~~~~~~e~~~l~~l~~~~i--~~~~ 59 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR--K-----------------GEQMALNEKKILEKVSSRFI--VSLA 59 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh--h-----------------hhHHHHHHHHHHHhCCCCCE--eeee
Confidence 68999999999988 4699999998863211000 0 01123468999999987543 2222
Q ss_pred e----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 178 D----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 178 ~----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
. .+..|+||||++|++|...+... .+ ..++.+++.+|.+||+.|++||||+|.||+++.++.++|+||
T Consensus 60 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~df 139 (277)
T cd05577 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDL 139 (277)
T ss_pred eEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccC
Confidence 2 25689999999999998765321 12 236789999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcch-------hh---
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KE--- 314 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~--- 314 (472)
|.+....... ... ... ....+ +|+.+....++.++|+||||+++++++++..+... ..
T Consensus 140 g~~~~~~~~~-------~~~---~~~-~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05577 140 GLAVELKGGK-------KIK---GRA-GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR 208 (277)
T ss_pred cchhhhccCC-------ccc---ccc-CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence 9886543210 000 111 12233 44444556688999999999999999987543210 00
Q ss_pred -------hhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 315 -------LAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 315 -------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.....++..+.++|.+|++.+|.+||+.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 209 RTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccccccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 012357888999999999999999998777
No 269
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.92 E-value=5.2e-25 Score=236.74 Aligned_cols=242 Identities=12% Similarity=0.028 Sum_probs=156.5
Q ss_pred eeecceecccCceeEEEEEeC--CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE--DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~--~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|... .+..+++|............ .+ .+... ..........+.+|+.+|.+|.|++
T Consensus 150 Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~k~--~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 150 FRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKC--ER-LIAKR--VKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred cEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhh--hh-hHhHH--hhcchHHHHHHHHHHHHHHhCCCCC
Confidence 788899999999999999763 34444444221110000000 00 00000 0000012234678999999999876
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC----------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ +.++++ +..|+||+++.+..+..+.... ....++.||+.+|.|||++|||||||||.|||++.
T Consensus 225 I--v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 225 I--LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC 302 (501)
T ss_pred c--CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 4 444432 5678999998654332221110 11248899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
++.++|+|||++.....+... ....+.+...+++|+.+....++.++||||||+++|+++++...+..
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREA--------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred CCCEEEEeCCCceecCccccc--------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 999999999999865432111 01123344444566665667899999999999999999875321100
Q ss_pred ---h-----------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 313 ---K-----------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 313 ---~-----------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. .+...+++..+.++|.+||..+|.+|||+.|....
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00112345566777999999999999999999875
Q ss_pred C
Q 012042 349 G 349 (472)
Q Consensus 349 ~ 349 (472)
-
T Consensus 455 p 455 (501)
T PHA03210 455 P 455 (501)
T ss_pred h
Confidence 4
No 270
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.92 E-value=2.5e-24 Score=210.27 Aligned_cols=223 Identities=13% Similarity=0.050 Sum_probs=157.6
Q ss_pred eeecceecccCceeEEEEEeCC----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARED----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+.+.+.||.|+||.||+|...+ ...||||....... .. ....+..|+.++.++.|
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~--------------------~~~~~~~e~~~l~~~~h 66 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PS--------------------VREKFLQEAYIMRQFDH 66 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HH--------------------HHHHHHHHHHHHHhCCC
Confidence 4567899999999999998732 24689998753321 00 01234579999999987
Q ss_pred CCCCcceeee---cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+++ ...++ ....++||||+++++|.+++... .+ ..++.+++.+|.+||++|++||||||.|||++.++
T Consensus 67 ~~i--~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~ 144 (270)
T cd05056 67 PHI--VKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD 144 (270)
T ss_pred Cch--hceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC
Confidence 653 33333 35678999999999998876421 11 23678999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---- 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---- 312 (472)
.++|+|||.+........ .. . + .......| +|+......++.++|+||||+.+|+.++ +..+...
T Consensus 145 ~~~l~d~g~~~~~~~~~~---~~-~--~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~ 215 (270)
T cd05056 145 CVKLGDFGLSRYLEDESY---YK-A--S---KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN 215 (270)
T ss_pred CeEEccCceeeecccccc---ee-c--C---CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 999999999876543211 00 0 0 01111223 4444455678899999999999999876 4322100
Q ss_pred ----h------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ----K------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ----~------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .......+..+..+|.+|+..+|++||+..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 216 DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 0112456788999999999999999999877543
No 271
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.92 E-value=1.2e-24 Score=220.37 Aligned_cols=228 Identities=12% Similarity=0.119 Sum_probs=159.1
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|++.+.||.|+||.||+|.. .+|+.||||.+......... ...+.+|+.+|.++.|++
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~--------------------~~~~~~e~~~l~~l~h~~ 65 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTL--------------------AKRTLRELKILRHFKHDN 65 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccc--------------------hHHHHHHHHHHHhcCCCC
Confidence 366778999999999999998 46999999987532111110 113457999999998865
Q ss_pred CCcceeee--------cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVD--------CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~--------~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ +.+++ ....++||||+.| +|.+++... . ...++.+|+.+|.+||.+||+||||||.||+++.
T Consensus 66 i--v~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~ 142 (334)
T cd07855 66 I--IAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE 142 (334)
T ss_pred c--cCHHHhccccCCCCceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 3 22221 1356899999975 676665322 1 2347889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||.+......... .......+++.....+|+.... ..++.++|+||||+++++++++...+...
T Consensus 143 ~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 143 DCELRIGDFGMARGLSSSPTE-----HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred CCcEEecccccceeecccCcC-----CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 999999999998765432111 0001112233323334444322 45889999999999999988765332100
Q ss_pred ------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++.++..+|.+|++.+|++||++++...
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0001346788899999999999999999987655
No 272
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.92 E-value=2.6e-24 Score=209.92 Aligned_cols=216 Identities=13% Similarity=0.135 Sum_probs=153.3
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..||+|+||.||+|.+ .++..||+|.+..... .. ...+.+|+.++.++.|.++ ..
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~--~~--------------------~~~~~~e~~~l~~l~h~~i--v~ 69 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS--RY--------------------VQPLHEEIALHSYLKHRNI--VQ 69 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCH--HH--------------------HHHHHHHHHHHHhcCCCCe--ee
Confidence 5799999999999997 4688999998753321 10 0134579999999988653 33
Q ss_pred eeec----CCceeEEeecCCCChhhhhccC---C--h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-CCcEE
Q 012042 176 AVDC----NRHCVIMSLVQGYPLVQVNQLQ---N--P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-DEKVT 241 (472)
Q Consensus 176 ~i~~----~~~~LVMEyi~G~~L~~l~~~~---~--~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-~g~vk 241 (472)
+++. +..+++|||++|++|...+... . + ..++.+|+.+|.+||+.||+||||||.||+++. ++.++
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~ 149 (268)
T cd06624 70 YLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVK 149 (268)
T ss_pred eeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEE
Confidence 3332 5689999999999998875321 1 1 136789999999999999999999999999975 67899
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccc-ccccccc--CCCCcchheeccCchhhhhhhccCCcch--h---
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLD--K--- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~--~--- 313 (472)
|+|||.+......+. ....+.+ ...| +|+.+.. ..++.++|+||||+++++++++..+... .
T Consensus 150 l~dfg~~~~~~~~~~---------~~~~~~~-~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~ 219 (268)
T cd06624 150 ISDFGTSKRLAGINP---------CTETFTG-TLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA 219 (268)
T ss_pred EecchhheecccCCC---------ccccCCC-CccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh
Confidence 999999865432111 0011112 2233 4443322 3478899999999999999987543211 0
Q ss_pred ---h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ---E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ---~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .....++.++..+|.+|++.+|.+||++.+-.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 263 (268)
T cd06624 220 AMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLL 263 (268)
T ss_pred hHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHH
Confidence 0 01235677889999999999999999987643
No 273
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.92 E-value=2.3e-24 Score=213.17 Aligned_cols=222 Identities=12% Similarity=0.114 Sum_probs=152.4
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|..||||+++.....-. .....+|+.+|..+.|.+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~---------------------~~~~~~e~~~l~~l~h~n 64 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV---------------------PFTAIREASLLKGLKHAN 64 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC---------------------cHHHHHHHHHHHhcCCCC
Confidence 366789999999999999988 4689999998864321000 012346899999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +.+.+. ...|+||||+.+..+..+.... . ...++.+++.+|.+||..||+|+||||.|||++.++.+
T Consensus 65 i--~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~ 142 (291)
T cd07870 65 I--VLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGEL 142 (291)
T ss_pred E--eEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcE
Confidence 3 333332 5689999999754443332211 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-cc-CCCCcchheeccCchhhhhhhccCCcc--hh--h
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TD-GDDGSDIDTDEGSRLSFASISKTAGFL--DK--E 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~-~~~~~~sDiySlG~~~f~~~t~~~~~l--~~--~ 314 (472)
+|+|||.+.....+.... . ... ....|.++++ .+ ..++.++|+||||+++++++++....- .. .
T Consensus 143 ~l~Dfg~~~~~~~~~~~~----~-----~~~-~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~ 212 (291)
T cd07870 143 KLADFGLARAKSIPSQTY----S-----SEV-VTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE 212 (291)
T ss_pred EEeccccccccCCCCCCC----C-----Ccc-ccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH
Confidence 999999987543221110 0 001 1233434443 22 357889999999999999999754221 00 0
Q ss_pred -------------------h-----------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 -------------------L-----------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 -------------------~-----------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+ .....+..+.++|.+|+..+|.+|||+++-.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 213 QLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred HHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 0 0011245677999999999999999987643
No 274
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.92 E-value=1.9e-24 Score=219.14 Aligned_cols=226 Identities=12% Similarity=0.118 Sum_probs=158.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++....... ......+|+.+|.++.|+++
T Consensus 7 y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~ni 65 (336)
T cd07849 7 YQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT---------------------FCQRTLREIKILRRFKHENI 65 (336)
T ss_pred eEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccch---------------------hHHHHHHHHHHHHhCCCCCc
Confidence 67789999999999999998 579999999875311100 01124569999999988653
Q ss_pred Ccceeee---------cCCceeEEeecCCCChhhhhccC-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD---------CNRHCVIMSLVQGYPLVQVNQLQ-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~---------~~~~~LVMEyi~G~~L~~l~~~~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
..+++ ....+++|||+++ +|...+... .+ ..++.|++.+|.+||+.||+||||||.|||++.+
T Consensus 66 --v~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~ 142 (336)
T cd07849 66 --IGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN 142 (336)
T ss_pred --CchhheeecccccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC
Confidence 22221 1346899999986 565554322 12 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
+.++|+|||++.....+.... .....+.+..+..+|+... ...++.++|+||+|+++++++++.......
T Consensus 143 ~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~ 216 (336)
T cd07849 143 CDLKICDFGLARIADPEHDHT------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL 216 (336)
T ss_pred CCEEECcccceeecccccccc------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999987653221100 0111223333334555433 356889999999999999999875322100
Q ss_pred -----------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -----------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -----------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++.++.++|.+|++.+|++||+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 217 HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00013457778899999999999999999887664
No 275
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.92 E-value=1.3e-25 Score=250.10 Aligned_cols=167 Identities=14% Similarity=0.163 Sum_probs=119.1
Q ss_pred ceeEEeecCCCChhhhhccCC----hH---HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecC--
Q 012042 182 HCVIMSLVQGYPLVQVNQLQN----PD---SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVS-- 252 (472)
Q Consensus 182 ~~LVMEyi~G~~L~~l~~~~~----~~---~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~-- 252 (472)
.||-||||+..++..++.... +. .+|++|+++|.|+|+.|||||||||.||++++++.|||.|||+|....
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~ 750 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKEN 750 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhh
Confidence 478899999888888765431 22 489999999999999999999999999999999999999999998632
Q ss_pred --c------ccchhhhccccchhhhhcccccccccccccc-C--CCCcchheeccCchhhhhhhccCCcchh--------
Q 012042 253 --H------QNAQMYFDRDVECIFKFFRKRFHLNFQETTD-G--DDGSDIDTDEGSRLSFASISKTAGFLDK-------- 313 (472)
Q Consensus 253 --~------p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~--~~~~~sDiySlG~~~f~~~t~~~~~l~~-------- 313 (472)
. +....-. .+....+...++..+++|+.... . .|+.++|+||+|+++||+.-.-....++
T Consensus 751 ~~~~d~~~~~~~~~~g-~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR 829 (1351)
T KOG1035|consen 751 LESIDQDLSFSTNRAG-SNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLR 829 (1351)
T ss_pred hhhHhhccCccccccC-CCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcc
Confidence 0 0000001 11223445666666667765532 3 6999999999999999987632111111
Q ss_pred -hhhc--cC-CC---HHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -ELAA--SG-FT---RKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -~~~~--~~-~s---~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
...+ .+ +. .+.+.+|..|++.+|.+|||+.|.+-.+
T Consensus 830 ~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~ 872 (1351)
T KOG1035|consen 830 KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSE 872 (1351)
T ss_pred cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhcc
Confidence 0111 11 22 2345899999999999999999998766
No 276
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=3.4e-24 Score=215.15 Aligned_cols=225 Identities=13% Similarity=0.059 Sum_probs=156.7
Q ss_pred eeecceecccCceeEEEEEeC--------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHH
Q 012042 93 TAVGRQLGVGKESDIFEVARE--------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMK 164 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~--------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~ 164 (472)
+.+++.||+|+||.||+|... ....||+|+++..... .. ...+.+|+.++.
T Consensus 14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~-~~--------------------~~~~~~E~~~l~ 72 (314)
T cd05099 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD-KD--------------------LADLISEMELMK 72 (314)
T ss_pred eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh-HH--------------------HHHHHHHHHHHH
Confidence 457899999999999999752 2457999987632211 10 012457889999
Q ss_pred Hhh-hCCCCcceeeec----CCceeEEeecCCCChhhhhccC------------------C----hHHHHHHHHHHHHHH
Q 012042 165 ALE-DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------------------N----PDSVFETIIGLVVRL 217 (472)
Q Consensus 165 ~L~-~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------------------~----~~~i~~qIl~aL~~L 217 (472)
++. |++ ++..++. +..+++|||++|++|..++... . ...++.+|+.+|.||
T Consensus 73 ~l~~h~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l 150 (314)
T cd05099 73 LIGKHKN--IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYL 150 (314)
T ss_pred hccCCCC--eeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHH
Confidence 884 544 3444432 5589999999999998875321 0 123678999999999
Q ss_pred HHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccC
Q 012042 218 AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGS 297 (472)
Q Consensus 218 H~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG 297 (472)
|++||+||||||.|||++.++.++|+|||.++.......... ..........++|+.+....++.++|+||||
T Consensus 151 H~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 223 (314)
T cd05099 151 ESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK-------TSNGRLPVKWMAPEALFDRVYTHQSDVWSFG 223 (314)
T ss_pred HHCCeeeccccceeEEEcCCCcEEEccccccccccccccccc-------cccCCCCccccCHHHHccCCcCccchhhHHH
Confidence 999999999999999999999999999999975532111000 0000001123455555567789999999999
Q ss_pred chhhhhhh-ccCCcc--------hh---h---hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 298 RLSFASIS-KTAGFL--------DK---E---LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 298 ~~~f~~~t-~~~~~l--------~~---~---~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+++|+.++ +..+.. .. . .....++.++.++|.+|+..+|++||+..+..+
T Consensus 224 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 224 ILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999887 332211 00 0 012345678999999999999999999887765
No 277
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.92 E-value=3.2e-24 Score=212.03 Aligned_cols=214 Identities=14% Similarity=0.131 Sum_probs=145.2
Q ss_pred eecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC-CCcce
Q 012042 98 QLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG-FPVPN 175 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g-i~vP~ 175 (472)
.||+|+||.||++.+ .+|+.||||+++......... ......|..++..+.... -.++.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~ 61 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-------------------ETLALNERIMLSLVSTGDCPFIVC 61 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH-------------------HHHHHHHHHHHHHHhhCCCCcEeE
Confidence 489999999999998 468999999886432111100 001223443333332211 11222
Q ss_pred eee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 176 AVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 176 ~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
.+. .+..++||||++|++|...+... . ...++.|++.+|.+||..||+||||||.|||++.++.++|+||
T Consensus 62 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~df 141 (279)
T cd05633 62 MTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDL 141 (279)
T ss_pred EEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccC
Confidence 222 25689999999999998765322 1 2347899999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcch----------hh
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLD----------KE 314 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~----------~~ 314 (472)
|.+........ ....+.....+|+... ...++.++|+||+|+++++++++..+... ..
T Consensus 142 g~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 210 (279)
T cd05633 142 GLACDFSKKKP-----------HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 210 (279)
T ss_pred CcceeccccCc-----------cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH
Confidence 99875432211 0111222223444433 35578999999999999999997543210 00
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
.....++.++..+|.+|+..+|.+|++
T Consensus 211 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 211 TLTVNVELPDSFSPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred hhcCCcCCccccCHHHHHHHHHHhcCCHHHhcC
Confidence 012357889999999999999999996
No 278
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.92 E-value=3.1e-24 Score=209.94 Aligned_cols=223 Identities=13% Similarity=0.096 Sum_probs=155.9
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+...||.|+||.||+|... +.+.|++|........ .....+.+|+.+|.++
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~---------------------~~~~~~~~E~~~l~~l 65 (275)
T cd05046 7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDE---------------------NLQSEFRRELDMFRKL 65 (275)
T ss_pred ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccch---------------------HHHHHHHHHHHHHHhc
Confidence 345688999999999999863 3467999976432111 0012345799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC-----------h----HHHHHHHHHHHHHHHHCCceeccC
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-----------P----DSVFETIIGLVVRLAEHGLIHCDF 227 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-----------~----~~i~~qIl~aL~~LH~~GIIHrDL 227 (472)
.|+++ +.+++. ...++||||+++++|.+++.... + ..++.+++.+|.|||+.||+||||
T Consensus 66 ~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl 143 (275)
T cd05046 66 SHKNV--VRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDL 143 (275)
T ss_pred CCcce--eeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcC
Confidence 88653 344432 56899999999999988753211 1 237889999999999999999999
Q ss_pred CCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc-
Q 012042 228 NEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK- 306 (472)
Q Consensus 228 KP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~- 306 (472)
||.|||++.++.++|+|||.+.....+... ............+|+......++.++|+||||+++++..+.
T Consensus 144 kp~Nili~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~ 215 (275)
T cd05046 144 AARNCLVSSQREVKVSLLSLSKDVYNSEYY--------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQG 215 (275)
T ss_pred ccceEEEeCCCcEEEcccccccccCccccc--------ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999998643221110 00011111112344444456678899999999999998873
Q ss_pred cCCcc---hh----h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 307 TAGFL---DK----E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 307 ~~~~l---~~----~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+.. +. . .....++..+..+|.+|+..+|++||++.+..
T Consensus 216 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l 270 (275)
T cd05046 216 ELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELV 270 (275)
T ss_pred CCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 21110 00 0 01245778899999999999999999987643
No 279
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.92 E-value=2.9e-24 Score=206.02 Aligned_cols=224 Identities=17% Similarity=0.180 Sum_probs=165.0
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||++.+. ++..||+|++........ ....+.+|++++..+.|+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~~ 61 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEK--------------------EREDALNEVKILKKLNHPNI 61 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChH--------------------HHHHHHHHHHHHHhcCCCCh
Confidence 456789999999999999984 689999998864321101 11235679999999987654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC------C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+++ ....+++|||++|.+|...+... . ...++.+++.+|.+||+.|++|+||+|.||+++++
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~ 139 (258)
T cd08215 62 --IKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSN 139 (258)
T ss_pred --hheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCC
Confidence 33332 26789999999999998865321 1 12478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+.++|+|||.+....++.. . .....+..+..+|+......++.++|+||+|+.+++.+++..+....
T Consensus 140 ~~~~l~d~~~~~~~~~~~~---~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~ 210 (258)
T cd08215 140 GLVKLGDFGISKVLSSTVD---L------AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE 210 (258)
T ss_pred CcEEECCccceeecccCcc---e------ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH
Confidence 9999999999976654321 0 01112222334555445677889999999999999998865332110
Q ss_pred ----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...+..++..+..+|.+|+..+|++||++.+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 211 LALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0112468889999999999999999999987654
No 280
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.92 E-value=3.5e-24 Score=209.80 Aligned_cols=215 Identities=13% Similarity=0.081 Sum_probs=149.2
Q ss_pred ceecccCceeEEEEEeC-CCC--EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCC
Q 012042 97 RQLGVGKESDIFEVARE-DGT--VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~-~g~--~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~ 172 (472)
+.||+|+||.||+|... +|. .+++|.++...... ....+.+|+.++.++ .|+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~---------------------~~~~~~~E~~~l~~l~~h~~i- 58 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---------------------DHRDFAGELEVLCKLGHHPNI- 58 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHH---------------------HHHHHHHHHHHHHhhccCCCe-
Confidence 36899999999999984 454 46888765221110 011345799999999 45442
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC------------------Ch----HHHHHHHHHHHHHHHHCCceecc
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------------------NP----DSVFETIIGLVVRLAEHGLIHCD 226 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------------------~~----~~i~~qIl~aL~~LH~~GIIHrD 226 (472)
.++++. +..++||||+++++|..++... .+ ..++.+++.+|.|||++|++|||
T Consensus 59 -v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~d 137 (270)
T cd05047 59 -INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD 137 (270)
T ss_pred -eeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 333332 5689999999999998875321 01 24788999999999999999999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
|||.|||++.++.++|+|||++..... ..... .......| +|+......++.++|+||||++++++++
T Consensus 138 ikp~nili~~~~~~kl~dfgl~~~~~~-----~~~~~------~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~ 206 (270)
T cd05047 138 LAARNILVGENYVAKIADFGLSRGQEV-----YVKKT------MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206 (270)
T ss_pred cccceEEEcCCCeEEECCCCCccccch-----hhhcc------CCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHc
Confidence 999999999999999999999753211 00000 01112233 4444456778899999999999999986
Q ss_pred -ccCCcch-------hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 306 -KTAGFLD-------KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 306 -~~~~~l~-------~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+..+... ..+ .....+..+.++|.+|+..+|.+|||.++-
T Consensus 207 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 207 LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred CCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 4332210 001 123466788999999999999999998764
No 281
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92 E-value=1.7e-24 Score=211.03 Aligned_cols=230 Identities=14% Similarity=0.117 Sum_probs=161.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|.+.+.||+|+||.||+|.. .+|..||||++..... .. ........+|+.++.++. |++
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~-----------------~~~~~~~~~e~~~~~~l~~~~~ 63 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL--IK-----------------EKKVKYVKIEKEVLTRLNGHPG 63 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc--cc-----------------hHHHHHHHHHHHHHHhcccCCC
Confidence 56778999999999999998 4799999998753210 00 000123457888999987 654
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +.++. .+..++||||++|++|.+++... ....++.+++.+|.+||++|++|+||+|.||+++.++.+
T Consensus 64 i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~ 141 (280)
T cd05581 64 I--IKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHI 141 (280)
T ss_pred c--hhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCE
Confidence 3 33333 26789999999999998876432 123488899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhh----------hc-cccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCC
Q 012042 241 TMIDFPQMVSVSHQNAQMY----------FD-RDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAG 309 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~----------l~-rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~ 309 (472)
+|+|||.+.....+..... .. .+......+......++|+......++.++|+||||+.+++.+++..+
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 142 KITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred EecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCC
Confidence 9999999986653321100 00 000111111222222344444556788999999999999999987543
Q ss_pred cch--------h-----hhhccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 310 FLD--------K-----ELAASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 310 ~l~--------~-----~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.-. . ...+..++..+..+|.+|+..+|.+||+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 268 (280)
T cd05581 222 FRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVN 268 (280)
T ss_pred CCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcc
Confidence 210 0 012356788899999999999999999993
No 282
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.92 E-value=3e-24 Score=212.59 Aligned_cols=220 Identities=15% Similarity=0.211 Sum_probs=160.4
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
...||.|++|.||++.+ .+++.++||.+....... ...+.+|+.++.++.|+++ .
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------~~~~~~e~~~l~~~~h~~v--v 79 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR----------------------RELLFNEVVIMRDYQHPNI--V 79 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH----------------------HHHHHHHHHHHHHcCCCCh--h
Confidence 36899999999999997 578999999875321110 1134578899999987653 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
.+++ .+..+++|||++|++|.+++... . ...++.+++.+|.+||++||+||||+|.||+++.++.++|+||
T Consensus 80 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~ 159 (285)
T cd06648 80 EMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDF 159 (285)
T ss_pred eEEEEEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEccc
Confidence 3333 27789999999999998875432 1 1247899999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----------h
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-----------E 314 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-----------~ 314 (472)
|.+...... ........+.....+|+......++.++|+||||+++++++++..+.... .
T Consensus 160 g~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 230 (285)
T cd06648 160 GFCAQVSKE---------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN 230 (285)
T ss_pred ccchhhccC---------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc
Confidence 987643211 11111112232334555545667899999999999999999975432110 0
Q ss_pred ----h-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 315 ----L-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 315 ----~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
+ ....++..+.++|.+|+..+|++||+..+..+-
T Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 231 LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 0 012267789999999999999999999887764
No 283
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=4.1e-25 Score=210.48 Aligned_cols=217 Identities=14% Similarity=0.141 Sum_probs=163.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
++++++||.|+||.||.|+. .++-.||+|++-... ..+ .-....+.||+++-..|+|+++
T Consensus 24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsq--i~~-----------------~~v~~qlrREiEIqs~L~hpni 84 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ--ILK-----------------TQVEHQLRREIEIQSHLRHPNI 84 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcEEEEeeeeHHH--HHH-----------------hcchhhhhheeEeecccCCccH
Confidence 47899999999999999998 578899999974211 100 0112346689999888887542
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc--------CChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL--------QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~--------~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
-+.+. ..+.||++||.+++.|...+.. ..+..+..|++.|+.|+|..+||||||||+|+|++..|.
T Consensus 85 --lrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~ 162 (281)
T KOG0580|consen 85 --LRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGE 162 (281)
T ss_pred --HhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCC
Confidence 22232 3678999999999988876541 134468999999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
++|+|||-++...+. .| .++++ ++-| +|++..+...+...|+|++|+.+|+++++.+++-..
T Consensus 163 lkiAdfGwsV~~p~~------kR-----~tlcg-t~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et 230 (281)
T KOG0580|consen 163 LKIADFGWSVHAPSN------KR-----KTLCG-TLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET 230 (281)
T ss_pred eeccCCCceeecCCC------Cc-----eeeec-ccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH
Confidence 999999999854311 11 11233 3445 455556678899999999999999999987654211
Q ss_pred --hh------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 314 --EL------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 314 --~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.+ .++.++.+-+++|.+|+..+|.+|..-
T Consensus 231 YkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l 267 (281)
T KOG0580|consen 231 YKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLAL 267 (281)
T ss_pred HHHHHHccccCCcccChhHHHHHHHHhccCccccccH
Confidence 11 247789999999999999999998653
No 284
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.92 E-value=3.4e-24 Score=205.01 Aligned_cols=225 Identities=16% Similarity=0.160 Sum_probs=162.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|++|.||+|.+. ++..|+||++......-. ....+.+|+.++.++.|+++
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 61 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEE--------------------ELEALEREIRILSSLQHPNI 61 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchH--------------------HHHHHHHHHHHHHHcCCCCE
Confidence 345688999999999999985 799999999864432100 11245679999999987653
Q ss_pred Ccceeee----c--CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----C--NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~--~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.++. . ...+++|||++|.+|.+++... . ...++.+++.+|.+||+.|++|+||+|.||+++.++.
T Consensus 62 --~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~ 139 (260)
T cd06606 62 --VRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGV 139 (260)
T ss_pred --eeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC
Confidence 33332 2 4578999999999998875432 1 1347889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
++|+|||.+......... .............+|+.......+.++|+||||+++++++++..+.-..
T Consensus 140 ~~l~d~~~~~~~~~~~~~-------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 212 (260)
T cd06606 140 VKLADFGCAKRLGDIETG-------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA 212 (260)
T ss_pred EEEcccccEEeccccccc-------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 999999999865433210 0001111222223444445566899999999999999999965321100
Q ss_pred ----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
...+..++..+.++|.+|+..+|++||+..+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll 255 (260)
T cd06606 213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELL 255 (260)
T ss_pred HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHh
Confidence 011345678899999999999999999987643
No 285
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.92 E-value=3.1e-24 Score=209.78 Aligned_cols=218 Identities=12% Similarity=0.078 Sum_probs=147.5
Q ss_pred eecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 98 QLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.||+|+||.||+|... ++..+|+|.++...... ....+.+|+.++.++.|+++ +
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i--v 58 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ---------------------EQMKFLEEAQPYRSLQHSNL--L 58 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH---------------------HHHHHHHHHHHHHhCCCCCE--e
Confidence 5899999999999763 35679999876432110 01134579999999988653 3
Q ss_pred eeeec----CCceeEEeecCCCChhhhhccC-------Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 175 NAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 175 ~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
..++. ...++||||++|++|..++... .. ..++.+++.++.|||+.|++||||||.||+++.++.
T Consensus 59 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~ 138 (269)
T cd05087 59 QCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLT 138 (269)
T ss_pred eEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc
Confidence 44432 5678999999999998875311 11 236789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-------CCCCcchheeccCchhhhhhh-ccCCcc
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-------GDDGSDIDTDEGSRLSFASIS-KTAGFL 311 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-------~~~~~~sDiySlG~~~f~~~t-~~~~~l 311 (472)
++|+|||.+........ +...+ ........++|+.... ..++.++|+||||+++|++++ +..+..
T Consensus 139 ~kL~dfg~~~~~~~~~~--~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 211 (269)
T cd05087 139 VKIGDYGLSHNKYKEDY--YVTPD-----QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYR 211 (269)
T ss_pred EEECCccccccccCcce--eecCC-----CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 99999999864322111 00000 0111111233443211 135789999999999999886 543211
Q ss_pred --h-hh----------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 --D-KE----------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 --~-~~----------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .. .....++..+..++++|. .+|++|||.++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~ 264 (269)
T cd05087 212 HLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVH 264 (269)
T ss_pred CCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHH
Confidence 0 00 011246677788998887 6899999988753
No 286
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92 E-value=4.2e-24 Score=212.93 Aligned_cols=238 Identities=12% Similarity=0.158 Sum_probs=148.5
Q ss_pred eeeecceecccCceeEEEEEeC-C---CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-D---GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~---g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+.+.||+|+||.||+|... + +..+|+|+.......+.... . ... .........++..+..+.
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~--~-~~~--------~~~~~~~~~~~~~~~~~~ 81 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMET--L-VYN--------NIYDIDKIALWKNIHNID 81 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHH--H-HHH--------hhhhHHHHHHHHHhccCC
Confidence 4778899999999999999874 3 55778886543222111000 0 000 000001112333344444
Q ss_pred hCCCCcceeeec--------CCceeEEeecCCCChhhhhcc---CC---hHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 168 DHGFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQL---QN---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 168 ~~gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~---~~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
|.+ +|..+.. ...+++|+++.. .+...... .. ...++.|++.+|.|||+.||+||||||.|||
T Consensus 82 h~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nil 158 (294)
T PHA02882 82 HLG--IPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIM 158 (294)
T ss_pred CCC--CCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 443 4555542 124677777653 33333221 11 1248899999999999999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD- 312 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~- 312 (472)
++.++.++|+|||+|.................. .+.++.+..+|+.+....++.++||||||+++++++++..+...
T Consensus 159 l~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~--~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 159 VDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKD--LHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EcCCCcEEEEEcCCceeeccCCccccccccccc--ccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999765321110000001111 11233344566656677899999999999999999987543210
Q ss_pred ---------------hh-----hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 ---------------KE-----LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ---------------~~-----~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. +.....++.+.+++..|+..+|++||+.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l 289 (294)
T PHA02882 237 GHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDAL 289 (294)
T ss_pred ccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHH
Confidence 00 1124567778899999999999999987653
No 287
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.91 E-value=9.1e-25 Score=213.64 Aligned_cols=219 Identities=16% Similarity=0.182 Sum_probs=151.7
Q ss_pred ecceecccCceeEEEEEeC-----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 95 VGRQLGVGKESDIFEVARE-----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~-----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
+.+.||.|.||.||+|... .+..|+||.+......- . ...+.+|+..|.+++|+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~-~--------------------~~~~~~e~~~l~~l~h~ 61 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEE-E--------------------EEEFLNEIQILRKLRHP 61 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHH-H--------------------HHHHHHHHHHHHTHSBT
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccc-c--------------------ceeeeeccccccccccc
Confidence 5688999999999999885 25679999985422111 0 12345799999999876
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC----C-h---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N-P---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~-~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
++ .++++. +..++||||+++++|.+++... . + ..++.+|+.+|.|||+.+|+||+|+|.||+++.+
T Consensus 62 ni--~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~ 139 (259)
T PF07714_consen 62 NI--VKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSN 139 (259)
T ss_dssp TB--E-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETT
T ss_pred cc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 53 444443 5689999999999998875432 1 1 2478999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhh-ccCCcch---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD--- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~--- 312 (472)
+.+||+|||.+....+..... .. ..-...+. ++|+......++.++||||||+.+++.++ +..+..+
T Consensus 140 ~~~Kl~~f~~~~~~~~~~~~~-~~-------~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~ 211 (259)
T PF07714_consen 140 GQVKLSDFGLSRPISEKSKYK-ND-------SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN 211 (259)
T ss_dssp TEEEEESTTTGEETTTSSSEE-ES-------TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH
T ss_pred ccccccccccccccccccccc-cc-------ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999998663221110 00 00111222 34544445668999999999999999998 3322111
Q ss_pred h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 ~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
. . .....++..+.++|.+|+..+|++|||.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~ 254 (259)
T PF07714_consen 212 EEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQE 254 (259)
T ss_dssp HHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHH
T ss_pred ccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHH
Confidence 0 0 113457888999999999999999999765
No 288
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.91 E-value=5.3e-24 Score=206.18 Aligned_cols=225 Identities=14% Similarity=0.196 Sum_probs=160.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.. .+++.||||+++.....-. ....+..|+.++.++.|.++
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~~~~l~~~~i 61 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPK--------------------TIKEIADEMKVLELLKHPNL 61 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchH--------------------HHHHHHHHHHHHHhCCCCCh
Confidence 56678999999999999988 4789999999875432200 01245679999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..++. .+..++||||++|++|.+++... . ...++.+++.+|.+||+.||+|+||+|.||+++.++.++
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~k 139 (264)
T cd06626 62 --VKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIK 139 (264)
T ss_pred --hheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 33333 26689999999999999876432 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCC---CCcchheeccCchhhhhhhccCCcch----h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGD---DGSDIDTDEGSRLSFASISKTAGFLD----K 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~---~~~~sDiySlG~~~f~~~t~~~~~l~----~ 313 (472)
|+|||.+.....+.... ......+.....+.++++ .... .+.++|+||||+++++.+++..+.-. .
T Consensus 140 l~d~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~ 213 (264)
T cd06626 140 LGDFGCAVKLKNNTTTM------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF 213 (264)
T ss_pred EcccccccccCCCCCcc------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH
Confidence 99999987654322110 000001112233433333 3333 78899999999999999987643210 0
Q ss_pred h------------hh-ccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 E------------LA-ASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ~------------~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. +. ...++..+.++|.+|+..+|++||+.++-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i 258 (264)
T cd06626 214 QIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASEL 258 (264)
T ss_pred HHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 0 00 01236778899999999999999998764
No 289
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.91 E-value=2.8e-24 Score=212.77 Aligned_cols=225 Identities=11% Similarity=0.125 Sum_probs=155.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|.+. +|+.||||.++....... ....+.+|+.++.++.|+++
T Consensus 4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 63 (294)
T PLN00009 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEG--------------------VPSTAIREISLLKEMQHGNI 63 (294)
T ss_pred eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccccc--------------------chHHHHHHHHHHHhccCCCE
Confidence 566789999999999999984 789999998753211100 00124578999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc-C---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-CC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL-Q---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-DE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~-~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-~g 238 (472)
+.+++. ...++||||+++ .|...+.. . . ...++.+|+.+|.+||+.||+||||+|.||+++. ++
T Consensus 64 --~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~ 140 (294)
T PLN00009 64 --VRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 140 (294)
T ss_pred --eeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC
Confidence 444432 678999999976 55544321 1 1 1246789999999999999999999999999984 55
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+.....+.. ...........++|+...+ ..++.++|+||||+++++++++.......
T Consensus 141 ~~kl~dfg~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~ 211 (294)
T PLN00009 141 ALKLADFGLARAFGIPVR---------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID 211 (294)
T ss_pred EEEEcccccccccCCCcc---------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 799999999864432110 0011111222234443322 45788999999999999999975332100
Q ss_pred ---h-----------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 ---E-----------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ---~-----------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
. .....++.++.++|.+|+..+|++||+.++..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~ 285 (294)
T PLN00009 212 ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE 285 (294)
T ss_pred HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0 00135678888999999999999999988876543
No 290
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.91 E-value=2.5e-24 Score=210.73 Aligned_cols=219 Identities=16% Similarity=0.230 Sum_probs=152.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+++.||||.++....+... ....+|+..+.++. |++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~---------------------~~~~~e~~~l~~l~~h~~ 59 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ---------------------VNNLREIQALRRLSPHPN 59 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchh---------------------hhHHHHHHHHhhcCCCCC
Confidence 35678899999999999998 46899999987532111110 01235888888886 544
Q ss_pred CCcceeee----c--CCceeEEeecCCCChhhhhcc-C---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 171 FPVPNAVD----C--NRHCVIMSLVQGYPLVQVNQL-Q---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 171 i~vP~~i~----~--~~~~LVMEyi~G~~L~~l~~~-~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+ +.+++ . +..++||||++| +|.+.+.. . . ...++.+++.+|.+||..|++||||+|.||+++.
T Consensus 60 i--~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~- 135 (282)
T cd07831 60 I--LRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD- 135 (282)
T ss_pred c--cceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-
Confidence 3 33333 1 568999999987 44444321 1 1 1347889999999999999999999999999998
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
+.++|+|||.+........ ...++...+..+|+.+ ....++.++|+||||+++++++++.......
T Consensus 136 ~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~ 205 (282)
T cd07831 136 DILKLADFGSCRGIYSKPP----------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL 205 (282)
T ss_pred CCeEEEecccccccccCCC----------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH
Confidence 9999999999875532211 0112233334455543 3456788999999999999998864221100
Q ss_pred ---------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ---------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ---------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++.++.++|.+|+..+|++||++++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 277 (282)
T cd07831 206 DQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277 (282)
T ss_pred HHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHh
Confidence 000135678899999999999999999987643
No 291
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.91 E-value=3e-24 Score=213.64 Aligned_cols=224 Identities=16% Similarity=0.218 Sum_probs=161.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||++.. .++..||+|.+....... ...+.+|+.++.++.|+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~----------------------~~~~~~e~~~l~~l~hp~i 78 (293)
T cd06647 21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK----------------------KELIINEILVMRENKHPNI 78 (293)
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchH----------------------HHHHHHHHHHHhhcCCCCe
Confidence 45678899999999999987 468899999875321100 1134578889999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.+++ .+..|+||||++|++|.+++... ....++.+++.+|.+||+.|++||||+|.||+++.++.++|
T Consensus 79 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL 156 (293)
T cd06647 79 --VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL 156 (293)
T ss_pred --eehhheeeeCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEE
Confidence 22222 26789999999999998876432 12347889999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----h---h
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----E---L 315 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----~---~ 315 (472)
+|||.+........ ......+.....+|+......++.++|+||||+.+++.+++..+.... . +
T Consensus 157 ~dfg~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~ 227 (293)
T cd06647 157 TDFGFCAQITPEQS---------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (293)
T ss_pred ccCcceeccccccc---------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh
Confidence 99998865432111 011112222334555445567889999999999999999876432100 0 0
Q ss_pred ---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 316 ---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 316 ---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
....++..++++|.+|+..+|++||+.++-....
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0123466788999999999999999988766543
No 292
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.91 E-value=3.5e-24 Score=214.18 Aligned_cols=221 Identities=14% Similarity=0.173 Sum_probs=157.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.. .+|+.||||++......... ....+.+|+.++..+.|+++
T Consensus 17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~-------------------~~~~~~~Ei~~l~~l~h~ni 77 (307)
T cd06607 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE-------------------KWQDIIKEVRFLQQLRHPNT 77 (307)
T ss_pred hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHH-------------------HHHHHHHHHHHHHhCCCCCE
Confidence 55678899999999999998 46899999987533211110 01134579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc---C-C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---Q-N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~-~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
...++ .+..++||||++|. +..++.. . . ...++.+++.+|.|||..||+||||+|.||+++.++.+
T Consensus 78 --v~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~ 154 (307)
T cd06607 78 --IEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTV 154 (307)
T ss_pred --EEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCE
Confidence 22322 26789999999864 3333211 1 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+|+|||++...... ..+.+..+..+|+.+ ....++.++|+||||+++++++++..+....
T Consensus 155 kL~dfg~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 155 KLADFGSASLVSPA-------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred EEeecCcceecCCC-------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 99999998643211 012222233445443 2366888999999999999999976432110
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+....++..+..+|.+|+..+|++||+..+-...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 222 ALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11123467888999999999999999998887654
No 293
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.91 E-value=5.9e-24 Score=208.93 Aligned_cols=225 Identities=14% Similarity=0.063 Sum_probs=158.1
Q ss_pred eeecceecccCceeEEEEEeC-CCC----EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGT----VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~----~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+.+.+.||+|+||.||+|... +|. .||+|....... .. ....+.+|+..|.++.
T Consensus 9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~-------------------~~~~~~~e~~~l~~l~ 67 (279)
T cd05057 9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PK-------------------ANKEILDEAYVMASVD 67 (279)
T ss_pred cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HH-------------------HHHHHHHHHHHHHhCC
Confidence 467799999999999999873 343 589997753321 10 1123557999999998
Q ss_pred hCCCCcceeee---cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ ...++ ....++||||+++++|.+.+... . ...++.+|+.+|.|||++||+||||||.||+++.+
T Consensus 68 h~~i--~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~ 145 (279)
T cd05057 68 HPHV--VRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTP 145 (279)
T ss_pred CCCc--ceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCC
Confidence 7653 33333 26789999999999998875432 1 12478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---- 312 (472)
+.++|+|||.+......... + ... .+ .....+++|+......++.++|+||||+.+++.++ +..+...
T Consensus 146 ~~~kL~dfg~~~~~~~~~~~-~-~~~-~~----~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 218 (279)
T cd05057 146 QHVKITDFGLAKLLDVDEKE-Y-HAE-GG----KVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV 218 (279)
T ss_pred CeEEECCCcccccccCcccc-e-ecC-CC----cccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH
Confidence 99999999999765422110 0 000 00 00112234554455778899999999999999887 5432110
Q ss_pred ---hhhh-------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ---KELA-------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ---~~~~-------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+. ....+..+..+|.+|+..+|.+||+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 219 EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0010 1235677889999999999999999887543
No 294
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.91 E-value=4.7e-24 Score=207.88 Aligned_cols=223 Identities=13% Similarity=0.103 Sum_probs=156.3
Q ss_pred eeecceecccCceeEEEEEeC-CCC---EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGT---VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~---~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+...+.||+|+||.||+|... ++. .+|||..+...... .......|+.++.++.|
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h 65 (268)
T cd05063 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEK---------------------QRQDFLSEASIMGQFSH 65 (268)
T ss_pred ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHH---------------------HHHHHHHHHHHHhcCCC
Confidence 345789999999999999884 343 79999875432110 01124568899999987
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ +.+++ .+..++||||+++++|..++... ....++.+++.++.+||+.|++||||||.||+++.+
T Consensus 66 ~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~ 143 (268)
T cd05063 66 HNI--IRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSN 143 (268)
T ss_pred CCe--eEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCC
Confidence 653 33333 26689999999999998875321 113478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD--- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~--- 312 (472)
+.++|+|||.+............ .......+.| +|+.+....++.++|+||||+++++.++ +..+...
T Consensus 144 ~~~kl~dfg~~~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~ 216 (268)
T cd05063 144 LECKVSDFGLSRVLEDDPEGTYT-------TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN 216 (268)
T ss_pred CcEEECCCccceeccccccccee-------ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence 99999999998765432111100 0001111233 4444455678899999999999999887 5433210
Q ss_pred ----hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 ----KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ----~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+ .....+..+.+++.+|+..+|++||+..+-
T Consensus 217 ~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i 260 (268)
T cd05063 217 HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDI 260 (268)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 011 012356788899999999999999998653
No 295
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.91 E-value=5.2e-24 Score=210.48 Aligned_cols=223 Identities=15% Similarity=0.182 Sum_probs=153.7
Q ss_pred eeecceecccCceeEEEEEe----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|++.+.||.|+||.||+|.. .+|+.||+|+++..... ... .......+|+.+|.++.+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~-~~~-----------------~~~~~~~~e~~~l~~l~~ 63 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIV-QKA-----------------KTTEHTRTERQVLEHIRQ 63 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhh-hcc-----------------hHHHHHHHHHHHHHhccc
Confidence 56778999999999999987 26899999998632110 000 011234579999999964
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+. .++.++.. +..++||||++|++|...+... .+ ..++.+++.+|.+||+.|++||||+|.|||++.++
T Consensus 64 ~~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~ 142 (290)
T cd05613 64 SP-FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG 142 (290)
T ss_pred CC-ChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC
Confidence 32 12333221 4568999999999998865322 12 23566999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--CCCCcchheeccCchhhhhhhccCCcc-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFL----- 311 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l----- 311 (472)
.++|+|||.+........ .....+.+.....+|+.... ..++.++|+||||+++++++++..+..
T Consensus 143 ~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~ 214 (290)
T cd05613 143 HVVLTDFGLSKEFHEDEV--------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK 214 (290)
T ss_pred CEEEeeCccceecccccc--------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc
Confidence 999999999875432111 11111222222334444322 346789999999999999998754321
Q ss_pred -h-hh----h------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 312 -D-KE----L------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 312 -~-~~----~------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
. .. + ....++..+..+|.+|+..+|++||+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~ 257 (290)
T cd05613 215 NSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGC 257 (290)
T ss_pred ccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 0 00 0 123467788999999999999999854
No 296
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.91 E-value=4.8e-24 Score=208.20 Aligned_cols=217 Identities=12% Similarity=0.089 Sum_probs=145.0
Q ss_pred eecccCceeEEEEEeCC---CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 98 QLGVGKESDIFEVARED---GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~~---g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.||+|+||.||+|...+ ...+|+|.++...... ....+.+|+..++.+.|+++ .
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~---------------------~~~~~~~e~~~~~~l~h~ni--i 58 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPD---------------------EQLLFLQEVQPYRELNHPNV--L 58 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChH---------------------HHHHHHHHHHHHHhCCCCCc--c
Confidence 58999999999997532 4568888765321100 01134578899999987653 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC--------C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ--------N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~--------~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
..++ ....++||||++|++|..++... . ...++.||+.+|.|||++||+||||||.|||++.++.
T Consensus 59 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~ 138 (269)
T cd05042 59 QCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLS 138 (269)
T ss_pred eEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCc
Confidence 3343 26689999999999998875321 0 1247789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccc-cccccc-------ccCCCCcchheeccCchhhhhhh-ccCCc
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQET-------TDGDDGSDIDTDEGSRLSFASIS-KTAGF 310 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~-------~~~~~~~~sDiySlG~~~f~~~t-~~~~~ 310 (472)
++|+|||.+........ +...+. ...... .+|+.+ ....++.++|+||||++++++++ +..+.
T Consensus 139 ~kl~dfg~~~~~~~~~~--~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~ 210 (269)
T cd05042 139 VKIGDYGLALEQYPEDY--YITKDC------HAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPY 210 (269)
T ss_pred EEEeccccccccccchh--eeccCC------CCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCC
Confidence 99999999864321110 000000 001111 233322 13457889999999999999888 32211
Q ss_pred --ch-h----------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 311 --LD-K----------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 311 --l~-~----------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.. . ......++..+..++..|. .+|++||++++-.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~ 264 (269)
T cd05042 211 PDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVH 264 (269)
T ss_pred CcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHH
Confidence 10 0 0012346677777777776 6999999987643
No 297
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.91 E-value=3.7e-24 Score=206.72 Aligned_cols=211 Identities=12% Similarity=0.046 Sum_probs=146.4
Q ss_pred ceecccCceeEEEEEeCC-C----------CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 97 RQLGVGKESDIFEVARED-G----------TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~-g----------~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
+.||+|+||.||+|.+.. + ..|++|++...... ...+.+|+.+|.+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-----------------------~~~~~~e~~~l~~ 57 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-----------------------SLAFFETASLMSQ 57 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-----------------------HHHHHHHHHHHHc
Confidence 368999999999999853 3 24777866432211 1234578899999
Q ss_pred hhhCCCCcceeeec---CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 166 LEDHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 166 L~~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
+.|+++ +..++. ...++||||++|++|..++... .+ ..++.+|+.+|.|||++||+||||||.|||++
T Consensus 58 l~h~~i--~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~ 135 (259)
T cd05037 58 LSHKHL--VKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVA 135 (259)
T ss_pred CCCcch--hheeeEEecCCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEe
Confidence 988654 232221 5789999999999998875421 11 23678999999999999999999999999999
Q ss_pred CCC-------cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC--CCCcchheeccCchhhhhhhc
Q 012042 236 DDE-------KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG--DDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 236 ~~g-------~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~--~~~~~sDiySlG~~~f~~~t~ 306 (472)
.++ .++|+|||.+...... +. ........+|+.+... .++.++|+||||+++++++++
T Consensus 136 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--------~~-----~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~ 202 (259)
T cd05037 136 RYGLNEGYVPFIKLSDPGIPITVLSR--------EE-----RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN 202 (259)
T ss_pred cCccccCCceeEEeCCCCcccccccc--------cc-----cccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence 777 7999999998754320 00 0111112344433333 688999999999999998874
Q ss_pred -cCCcchh------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 307 -TAGFLDK------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 307 -~~~~l~~------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+.... ..........+.++|.+|+..+|.+||+..+.
T Consensus 203 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 254 (259)
T cd05037 203 GEEPLSTLSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAI 254 (259)
T ss_pred CCCCcccCCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHH
Confidence 2211000 00011223678899999999999999998764
No 298
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91 E-value=5.9e-24 Score=215.44 Aligned_cols=226 Identities=12% Similarity=0.086 Sum_probs=157.9
Q ss_pred eeeecceecccCceeEEEEEeC--------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE--------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM 163 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~--------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L 163 (472)
-|.+++.||+|+||.||+|.+. .+..||+|+.+..... .. ...+.+|+.++
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~--------------------~~~~~~E~~~l 71 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD-KD--------------------LSDLVSEMEMM 71 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH-HH--------------------HHHHHHHHHHH
Confidence 3678899999999999999752 1236899987532111 00 11345799999
Q ss_pred HHh-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC----------------------hHHHHHHHHHHHHH
Q 012042 164 KAL-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN----------------------PDSVFETIIGLVVR 216 (472)
Q Consensus 164 ~~L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~----------------------~~~i~~qIl~aL~~ 216 (472)
.++ .|+++ ..+++. +..+++|||+++++|..++.... ...++.|++.+|.|
T Consensus 72 ~~l~~h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~ 149 (334)
T cd05100 72 KMIGKHKNI--INLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEY 149 (334)
T ss_pred HhhcCCCCe--eeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHH
Confidence 999 56543 333332 56899999999999988753210 01367899999999
Q ss_pred HHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheecc
Q 012042 217 LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 217 LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySl 296 (472)
||.+||+||||||.|||++.++.++|+|||.++........ ...... ......++|+.+....++.++|+|||
T Consensus 150 LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~----~~~~~y~aPE~~~~~~~~~~~Di~sl 222 (334)
T cd05100 150 LASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYY---KKTTNG----RLPVKWMAPEALFDRVYTHQSDVWSF 222 (334)
T ss_pred HHHCCeeccccccceEEEcCCCcEEECCcccceeccccccc---ccccCC----CcCceEcCHHHhccCCcCchhhhHHH
Confidence 99999999999999999999999999999998765321110 000000 00111235555566778999999999
Q ss_pred Cchhhhhhh-ccCCc----chh---h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 297 SRLSFASIS-KTAGF----LDK---E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 297 G~~~f~~~t-~~~~~----l~~---~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|++++++++ +..+. .+. . .....++.++..+|.+|+..+|++||+..+..+
T Consensus 223 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 223 GVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999999887 33211 000 0 112456778999999999999999999987765
No 299
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.91 E-value=2.5e-24 Score=214.52 Aligned_cols=226 Identities=14% Similarity=0.150 Sum_probs=154.1
Q ss_pred eeecceecccCceeEEEEEe-C--CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-E--DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~--~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
|.+.+.||+|+||.||+|.+ . +++.||||++.......... .....+|+.++.++.|+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~-------------------~~~~~~e~~~l~~l~h~ 62 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGI-------------------SQSACREIALLRELKHE 62 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCc-------------------cHHHHHHHHHHHhcCCC
Confidence 45678899999999999998 3 58999999987532110000 01234689999999887
Q ss_pred CCCcceeee----c--CCceeEEeecCCCChhhhhc----c---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 170 GFPVPNAVD----C--NRHCVIMSLVQGYPLVQVNQ----L---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 170 gi~vP~~i~----~--~~~~LVMEyi~G~~L~~l~~----~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
++ ..+++ . ...++||||+++. |..++. . ..+ ..++.||+.+|.|||+.||+||||||.||
T Consensus 63 ~i--~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Ni 139 (316)
T cd07842 63 NV--VSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANI 139 (316)
T ss_pred Cc--cceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHE
Confidence 64 23332 1 4579999999864 433321 0 111 24788999999999999999999999999
Q ss_pred EEcC----CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhcc
Q 012042 233 MIDD----DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 233 Ll~~----~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~ 307 (472)
|++. ++.++|+|||++.....+... ... ...........+|+.+.+ ..++.++|+||||+++++++++.
T Consensus 140 l~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~ 213 (316)
T cd07842 140 LVMGEGPERGVVKIGDLGLARLFNAPLKP-LAD-----LDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLE 213 (316)
T ss_pred EEcCCCCccceEEECCCccccccCCCccc-ccc-----cCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcC
Confidence 9998 889999999999865443221 000 001112222345554433 45789999999999999998864
Q ss_pred CCcchh--h------------------------------------------h---hc------------cCCCHHHHHHH
Q 012042 308 AGFLDK--E------------------------------------------L---AA------------SGFTRKDQDVI 328 (472)
Q Consensus 308 ~~~l~~--~------------------------------------------~---~~------------~~~s~~~~~~l 328 (472)
...... . . .. ...+.++.++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 293 (316)
T cd07842 214 PIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLL 293 (316)
T ss_pred CCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHH
Confidence 321100 0 0 00 04556778999
Q ss_pred HHHHhcCcccCCCCCCCC
Q 012042 329 QKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 329 ~k~l~~~p~~R~s~~e~~ 346 (472)
.+|+..+|++|||++|..
T Consensus 294 ~~~l~~~P~~Rps~~eil 311 (316)
T cd07842 294 RKLLEYDPTKRITAEEAL 311 (316)
T ss_pred HHHhcCCcccCcCHHHHh
Confidence 999999999999987654
No 300
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.91 E-value=3.3e-24 Score=211.47 Aligned_cols=222 Identities=16% Similarity=0.224 Sum_probs=163.7
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+...||+|++|.||+|.+. ++..|++|++...... ...+.+|+..+.++.|.++
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------~~~~~~e~~~l~~l~~~~i 77 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQN-----------------------KELIINEILIMKDCKHPNI 77 (286)
T ss_pred chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchh-----------------------HHHHHHHHHHHHHCCCCCe
Confidence 556688999999999999985 6899999998754320 1134578999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++. .+..+++|||++|++|.+++... .+ ..++.+++.+|.+||..||+|+||+|.||+++.++.+
T Consensus 78 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~ 155 (286)
T cd06614 78 --VDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSV 155 (286)
T ss_pred --eEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCE
Confidence 33333 36789999999999999876432 11 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||.+.....+.. .....++...+.+|+......++.++|+||||+++++++++..+....
T Consensus 156 ~l~d~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~ 226 (286)
T cd06614 156 KLADFGFAAQLTKEKS---------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALF 226 (286)
T ss_pred EECccchhhhhccchh---------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999998865432211 111112222334555445567899999999999999999875321100
Q ss_pred hh---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 EL---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ~~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ ....++..++++|.+|++.+|.+||+..+-.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 227 LITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00 012377889999999999999999999876653
No 301
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.91 E-value=3.3e-24 Score=206.80 Aligned_cols=221 Identities=14% Similarity=0.139 Sum_probs=158.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|... +|..||+|.+........ ....+.+|+.+++++.|+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~E~~~l~~~~h~~i 61 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVK--------------------EKEASKKEVILLAKMKHPNI 61 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccch--------------------hhHHHHHHHHHHHhCCCCCh
Confidence 466789999999999999984 689999998753211111 01234579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.+++ .+..+++|||++|++|..++... . ...++.+++.+|.+||..||+|+||+|.||++++++.
T Consensus 62 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~ 139 (257)
T cd08225 62 --VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM 139 (257)
T ss_pred --hhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC
Confidence 33332 25679999999999998865321 1 1247889999999999999999999999999987754
Q ss_pred -EEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcch----h
Q 012042 240 -VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----K 313 (472)
Q Consensus 240 -vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~ 313 (472)
++|+|||.+........ .... ....+.+ +|+......++.++|+||||+.+++++++..+... .
T Consensus 140 ~~~l~d~~~~~~~~~~~~---------~~~~-~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 209 (257)
T cd08225 140 VAKLGDFGIARQLNDSME---------LAYT-CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ 209 (257)
T ss_pred eEEecccccchhccCCcc---------cccc-cCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 69999998865432110 0111 1122333 44444556788999999999999999987533210 0
Q ss_pred ---hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ---EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ---~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ ....++..+..+|.+|+..+|++||+..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 251 (257)
T cd08225 210 LVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSI 251 (257)
T ss_pred HHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 00 123577889999999999999999998764
No 302
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.91 E-value=5.3e-24 Score=209.12 Aligned_cols=222 Identities=14% Similarity=0.061 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEeCC-----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVARED-----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~-----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|.+.+.||+|+||.||+|.+.. +..|++|.+..... ... ...+.+|+.+|.++.
T Consensus 8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~--------------------~~~~~~e~~~l~~l~ 66 (280)
T cd05043 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS-EIQ--------------------VTLLLQESCLLYGLS 66 (280)
T ss_pred eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC-HHH--------------------HHHHHHHHHHHHhCC
Confidence 5678999999999999999854 68899998753211 110 123457999999998
Q ss_pred hCCCCcceeeec-----CCceeEEeecCCCChhhhhccC----------Ch----HHHHHHHHHHHHHHHHCCceeccCC
Q 012042 168 DHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ----------NP----DSVFETIIGLVVRLAEHGLIHCDFN 228 (472)
Q Consensus 168 ~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~----------~~----~~i~~qIl~aL~~LH~~GIIHrDLK 228 (472)
|+++ ..+++. ...+++++|+++++|..++... .+ ..++.+++.+|.|||+.|++|||||
T Consensus 67 h~ni--~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~ 144 (280)
T cd05043 67 HQNI--LPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA 144 (280)
T ss_pred CCCC--CeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 8764 333332 4578999999999998875321 11 2378899999999999999999999
Q ss_pred CCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccc-cccccccccCCCCcchheeccCchhhhhhh-c
Q 012042 229 EFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRF-HLNFQETTDGDDGSDIDTDEGSRLSFASIS-K 306 (472)
Q Consensus 229 P~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y-~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~ 306 (472)
|.||+++.++.++|+|||.++.+...... .......... .++|+.+....++.++||||||+.+++..+ +
T Consensus 145 p~nil~~~~~~~kl~d~g~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g 216 (280)
T cd05043 145 ARNCVIDEELQVKITDNALSRDLFPMDYH--------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLG 216 (280)
T ss_pred HhhEEEcCCCcEEECCCCCcccccCCceE--------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCC
Confidence 99999999999999999999754321110 0000011122 234554456678999999999999999887 5
Q ss_pred cCCcch---hhh-----------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 307 TAGFLD---KEL-----------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 307 ~~~~l~---~~~-----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+... ..+ ....++..+.+++.+|+..+|++|||..+-
T Consensus 217 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 269 (280)
T cd05043 217 QTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQL 269 (280)
T ss_pred CCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 432110 000 112456788999999999999999998764
No 303
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.91 E-value=4e-24 Score=213.68 Aligned_cols=225 Identities=11% Similarity=0.109 Sum_probs=157.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|+||.||+|.+ .+|+.||+|.++.....-.. .....+|+.++.++.|.++
T Consensus 9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i 68 (309)
T cd07845 9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGI--------------------PISSLREITLLLNLRHPNI 68 (309)
T ss_pred eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCC--------------------cchhhHHHHHHHhCCCCCC
Confidence 56778999999999999998 56999999988643211000 0123469999999998764
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
. .+++. +..++||||+++ +|..++... ....++.||+.+|.+||+.|++||||||.||+++.++
T Consensus 69 ~--~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~ 145 (309)
T cd07845 69 V--ELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG 145 (309)
T ss_pred c--ceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 2 22221 457999999986 565543321 1134889999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcch---h-
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLD---K- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~- 313 (472)
.++|+|||.+.....+... ....+....+.+|+... ...++.++|+||+|+++++++++...... .
T Consensus 146 ~~kL~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~ 216 (309)
T cd07845 146 CLKIADFGLARTYGLPAKP---------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE 216 (309)
T ss_pred CEEECccceeeecCCccCC---------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999765432110 00011112223444332 35578999999999999999887532100 0
Q ss_pred -----------------------------hhh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -----------------------------ELA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -----------------------------~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+. ...++.++.++|.+|+..+|++||+.++-..-.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 217 QLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred HHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 000 012577788999999999999999998776533
No 304
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.91 E-value=2.7e-24 Score=209.89 Aligned_cols=223 Identities=14% Similarity=0.082 Sum_probs=155.2
Q ss_pred eecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 94 AVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
.+.+.||+|+||.||+|... +++.||||++......... ...+.+|+.+|.++.|+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~ 61 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSD--------------------IEEFLREAACMKEFDHP 61 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHH--------------------HHHHHHHHHHHhcCCCC
Confidence 45788999999999999862 4788999988643211111 11345799999999886
Q ss_pred CCCcceeeec----------CCceeEEeecCCCChhhhhcc--------C-C---hHHHHHHHHHHHHHHHHCCceeccC
Q 012042 170 GFPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQL--------Q-N---PDSVFETIIGLVVRLAEHGLIHCDF 227 (472)
Q Consensus 170 gi~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~--------~-~---~~~i~~qIl~aL~~LH~~GIIHrDL 227 (472)
++ ...++. ...+++++|+.+++|..++.. . . ...++.+|+.+|.|||+.||+||||
T Consensus 62 ~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~di 139 (273)
T cd05074 62 NV--IKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDL 139 (273)
T ss_pred Cc--ceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeeccc
Confidence 53 344432 123788999999998765321 0 1 1347899999999999999999999
Q ss_pred CCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-c
Q 012042 228 NEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-K 306 (472)
Q Consensus 228 KP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~ 306 (472)
||.||+++.++.++|+|||.+........ +. . ..........++|+......++.++|+||||++++++.+ +
T Consensus 140 kp~nili~~~~~~kl~dfg~~~~~~~~~~--~~----~-~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g 212 (273)
T cd05074 140 AARNCMLNENMTVCVADFGLSKKIYSGDY--YR----Q-GCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRG 212 (273)
T ss_pred chhhEEEcCCCCEEECcccccccccCCcc--ee----c-CCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCC
Confidence 99999999999999999999875432110 00 0 001111112245555556678899999999999999887 3
Q ss_pred cCCcc--hh-----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 307 TAGFL--DK-----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 307 ~~~~l--~~-----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+.. +. . .....++..+.+++.+|+..+|++|||..+-
T Consensus 213 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~ 265 (273)
T cd05074 213 QTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHL 265 (273)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 32210 00 0 0123567889999999999999999998764
No 305
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.91 E-value=5.1e-24 Score=211.40 Aligned_cols=225 Identities=13% Similarity=0.148 Sum_probs=152.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+...||+|+||.||+|.+ .+++.||||.+......-. ....+.+|+.++.++.|+++
T Consensus 14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 73 (310)
T cd07865 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEG--------------------FPITALREIKILQLLKHENV 73 (310)
T ss_pred eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCC--------------------chhHHHHHHHHHHhCCCCCc
Confidence 66779999999999999998 4699999998753211000 00123469999999988764
Q ss_pred Ccceeeec------------CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 172 PVPNAVDC------------NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 172 ~vP~~i~~------------~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
...++. ...++||||+.+ .|...+... . ...++.||+.+|.+||++|++|+||||.||
T Consensus 74 --v~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~ni 150 (310)
T cd07865 74 --VNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANI 150 (310)
T ss_pred --cceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 222221 235999999986 555443211 1 124788999999999999999999999999
Q ss_pred EEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-ccccccc-CCCCcchheeccCchhhhhhhccCCc
Q 012042 233 MIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTD-GDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 233 Ll~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
+++.++.++|+|||.+.....+.... . ........ ...| +|+.... ..++.++|+||||++++++.++....
T Consensus 151 l~~~~~~~kl~dfg~~~~~~~~~~~~--~---~~~~~~~~-~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 151 LITKDGILKLADFGLARAFSLSKNSK--P---NRYTNRVV-TLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred EECCCCcEEECcCCCcccccCCcccC--C---CCccCccc-CccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 99999999999999997654332210 0 01111122 2233 4443323 34688999999999999998864311
Q ss_pred chh---------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 311 LDK---------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 311 l~~---------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
... .+.....+..+.++|.+|+..+|++|||+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~ 304 (310)
T cd07865 225 QGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTA 304 (310)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence 000 00011124566789999999999999998765
Q ss_pred C
Q 012042 346 S 346 (472)
Q Consensus 346 ~ 346 (472)
.
T Consensus 305 l 305 (310)
T cd07865 305 L 305 (310)
T ss_pred h
Confidence 4
No 306
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.91 E-value=2.7e-24 Score=212.83 Aligned_cols=223 Identities=11% Similarity=0.157 Sum_probs=157.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+. +++.+|||.++.....-. ....+.+|+.++.++.|+++
T Consensus 7 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~ni 66 (293)
T cd07843 7 YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEG--------------------FPITSLREINILLKLQHPNI 66 (293)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccccc--------------------chhhHHHHHHHHHhcCCCCE
Confidence 455688999999999999984 689999998864321100 00124479999999988654
Q ss_pred Ccceeee----c--CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVD----C--NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~----~--~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+.++. . +..|+||||+++ +|..++... . ...++.+|+.+|.|||+.||+|+||+|.||+++.++
T Consensus 67 --~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~ 143 (293)
T cd07843 67 --VTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG 143 (293)
T ss_pred --EEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC
Confidence 33322 2 678999999986 776654321 1 124889999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+.....+... ....+...+.++|+.... ..++.++|+||||+++++++++.......
T Consensus 144 ~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~ 214 (293)
T cd07843 144 ILKICDFGLAREYGSPLKP---------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID 214 (293)
T ss_pred cEEEeecCceeeccCCccc---------cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 9999999998866433210 111222333345554322 34688999999999999998874321100
Q ss_pred -------------------------------------hh---hccC-CCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------------------------------------EL---AASG-FTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------------------------------------~~---~~~~-~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ .... ++..+.++|.+|+..+|++|||+.|...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 215 QLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 0011 4777889999999999999999877643
No 307
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.91 E-value=6.3e-24 Score=208.32 Aligned_cols=221 Identities=15% Similarity=0.099 Sum_probs=150.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH-hhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA-LEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~-L~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||.++.....-. ......|...+.+ +.|++
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~---------------------~~~~~~e~~~~~~~~~~~~ 61 (283)
T cd06617 3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE---------------------QKRLLMDLDISMRSVDCPY 61 (283)
T ss_pred ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH---------------------HHHHHHHHHHHHHHcCCCC
Confidence 45678899999999999998 4799999998864321100 0012245554333 44433
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhc----c--CCh----HHHHHHHHHHHHHHHHC-CceeccCCCCcEEEc
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQ----L--QNP----DSVFETIIGLVVRLAEH-GLIHCDFNEFNIMID 235 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~----~--~~~----~~i~~qIl~aL~~LH~~-GIIHrDLKP~NILl~ 235 (472)
+++.++ .+..+++|||++| +|..++. . ..+ ..++.||+.+|.|||++ +++||||||.||+++
T Consensus 62 --iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~ 138 (283)
T cd06617 62 --TVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN 138 (283)
T ss_pred --eeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC
Confidence 233333 2668999999985 4544321 1 112 24788999999999997 999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc----CCCCcchheeccCchhhhhhhccCCcc
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD----GDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~----~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
.++.++|+|||.+......... ....+.....+|+.+.. ..++.++|+||||+++++++++..+..
T Consensus 139 ~~~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 208 (283)
T cd06617 139 RNGQVKLCDFGISGYLVDSVAK----------TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD 208 (283)
T ss_pred CCCCEEEeeccccccccccccc----------ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence 9999999999998754322110 00111112234443322 456889999999999999999754321
Q ss_pred hh----------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 DK----------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ~~----------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. .+....++.++..+|.+|+..+|++||+.++-..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 209 SWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 1112347888999999999999999999977665
No 308
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.91 E-value=4.5e-24 Score=208.82 Aligned_cols=213 Identities=11% Similarity=0.071 Sum_probs=146.4
Q ss_pred ceecccCceeEEEEEeCC-------------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH
Q 012042 97 RQLGVGKESDIFEVARED-------------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM 163 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~-------------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L 163 (472)
+.||+|+||.||+|...+ ...|++|++....... ......|+.++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~----------------------~~~~~~~~~~l 58 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDI----------------------SLAFFETASMM 58 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhH----------------------HHHHHHHHHHH
Confidence 368999999999997521 2358888765321111 11244678889
Q ss_pred HHhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 164 KALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 164 ~~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
..+.|+++ +.++++ ...++||||+++++|..++... .. ..++.||+.+|.|||+.||+||||||.||
T Consensus 59 ~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Ni 136 (262)
T cd05077 59 RQVSHKHI--VLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNI 136 (262)
T ss_pred HhCCCCCE--eeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccE
Confidence 99988653 333332 5679999999999987765321 11 24788999999999999999999999999
Q ss_pred EEcCCCc-------EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhh
Q 012042 233 MIDDDEK-------VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASI 304 (472)
Q Consensus 233 Ll~~~g~-------vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~ 304 (472)
|++.++. ++++|||.+....... ...++...++|+.+. ...++.++||||||+++++++
T Consensus 137 ll~~~~~~~~~~~~~~l~d~g~~~~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~ 203 (262)
T cd05077 137 LLAREGIDGECGPFIKLSDPGIPITVLSRQ-------------ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEIC 203 (262)
T ss_pred EEecCCccCCCCceeEeCCCCCCccccCcc-------------cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHH
Confidence 9986553 8999999886442111 011122223444333 467889999999999999987
Q ss_pred h-ccCCcch-----h-h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 305 S-KTAGFLD-----K-E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 305 t-~~~~~l~-----~-~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. +..+... . . .....+..++.++|.+|+..+|++||+..+-.
T Consensus 204 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il 258 (262)
T cd05077 204 YNGEIPLKDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIM 258 (262)
T ss_pred hCCCCCCCCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 4 3322110 0 0 01223567788999999999999999986543
No 309
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.91 E-value=7.1e-24 Score=207.95 Aligned_cols=219 Identities=14% Similarity=0.175 Sum_probs=152.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|.+.+.||.|++|.||+|... +++.|+||.+........ .....+|+..+.++. |++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~---------------------~~~~~~e~~~l~~~~~h~~ 59 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE---------------------ECMNLREVKSLRKLNEHPN 59 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh---------------------HHHHHHHHHHHHhccCCCC
Confidence 456789999999999999985 588999998753321111 011235888888887 654
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC-----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+ +.++. .+..++||||+ +++|.+.+... . ...++.+++.+|.+||++|++|+||+|.||++++++
T Consensus 60 i--~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~ 136 (283)
T cd07830 60 I--VKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE 136 (283)
T ss_pred c--hhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence 3 33322 26789999999 56676654321 1 124788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+........ ...+.+..+..+|+.. ....++.++|+||||+++++++++.......
T Consensus 137 ~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~ 206 (283)
T cd07830 137 VVKIADFGLAREIRSRPP----------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID 206 (283)
T ss_pred CEEEeecccceeccCCCC----------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH
Confidence 999999999875532111 0112222233445543 2455789999999999999998875321000
Q ss_pred ---------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ---------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ---------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.......+..+..+|.+|+..+|++||+.+|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei 277 (283)
T cd07830 207 QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQA 277 (283)
T ss_pred HHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHH
Confidence 00001235678899999999999999998654
No 310
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.91 E-value=5e-24 Score=223.11 Aligned_cols=224 Identities=14% Similarity=0.091 Sum_probs=156.4
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+++.||+|+||.||+|.+. .++.||||+++.....- ....+.+|+.+|.++
T Consensus 39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~---------------------~~~~~~~E~~~l~~l 97 (401)
T cd05107 39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSS---------------------EKQALMSELKIMSHL 97 (401)
T ss_pred eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChh---------------------HHHHHHHHHHHHHhc
Confidence 456799999999999999852 34689999986432110 011345799999999
Q ss_pred h-hCCCCcceeeec----CCceeEEeecCCCChhhhhccCC---------------------------------------
Q 012042 167 E-DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN--------------------------------------- 202 (472)
Q Consensus 167 ~-~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~--------------------------------------- 202 (472)
. |++ ++..++. +..++||||++|++|.+++....
T Consensus 98 ~~H~n--iv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (401)
T cd05107 98 GPHLN--IVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESD 175 (401)
T ss_pred CCCCC--eEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccC
Confidence 7 543 2333332 56799999999999987653110
Q ss_pred -----------------------------------------------------------------hHHHHHHHHHHHHHH
Q 012042 203 -----------------------------------------------------------------PDSVFETIIGLVVRL 217 (472)
Q Consensus 203 -----------------------------------------------------------------~~~i~~qIl~aL~~L 217 (472)
...++.+|+.+|.||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L 255 (401)
T cd05107 176 GGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFL 255 (401)
T ss_pred ccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 012667999999999
Q ss_pred HHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccC
Q 012042 218 AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGS 297 (472)
Q Consensus 218 H~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG 297 (472)
|..||+||||||.|||++.++.++|+|||++......... ......+.....++|+......++.++|+||||
T Consensus 256 H~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG 328 (401)
T cd05107 256 ASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY-------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFG 328 (401)
T ss_pred hcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc-------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHH
Confidence 9999999999999999999999999999999754321110 000111222223345544556788999999999
Q ss_pred chhhhhhh-ccCCcc--h------hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 298 RLSFASIS-KTAGFL--D------KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 298 ~~~f~~~t-~~~~~l--~------~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+++++.++ +..+.. . ..+ .+..++.++.++|.+|+..+|++||+.++..
T Consensus 329 vil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell 393 (401)
T cd05107 329 ILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV 393 (401)
T ss_pred HHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 99999887 332210 0 000 1234678899999999999999999987653
No 311
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.91 E-value=5.7e-24 Score=210.41 Aligned_cols=222 Identities=14% Similarity=0.128 Sum_probs=159.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.+.+.||.|++|.||+|.+ .+++.||+|++...... . ....+.+|+.+|.++.|+++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~--------------------~~~~~~~e~~~l~~l~h~~i 61 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-D--------------------LQKQILRELEINKSCKSPYI 61 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-H--------------------HHHHHHHHHHHHHhCCCCCe
Confidence 34568899999999999999 46899999988643211 0 01134579999999988764
Q ss_pred Ccceeee------cCCceeEEeecCCCChhhhhcc----C--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 172 PVPNAVD------CNRHCVIMSLVQGYPLVQVNQL----Q--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 172 ~vP~~i~------~~~~~LVMEyi~G~~L~~l~~~----~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
..++. .+..++||||++|++|.+++.. . . ...++.+|+.+|.|||..|++|+||+|.||+++
T Consensus 62 --v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~ 139 (287)
T cd06621 62 --VKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT 139 (287)
T ss_pred --eeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe
Confidence 33322 1357999999999999775421 1 1 124888999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
.++.++|+|||.+.....+... .+.......+|+......++.++|+||+|+++++++++..+.-..
T Consensus 140 ~~~~~~l~dfg~~~~~~~~~~~-----------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 208 (287)
T cd06621 140 RKGQVKLCDFGVSGELVNSLAG-----------TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE 208 (287)
T ss_pred cCCeEEEeeccccccccccccc-----------cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccC
Confidence 9999999999998654322111 111222223455445677899999999999999999875321000
Q ss_pred ------h----hh-------------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ------E----LA-------------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ------~----~~-------------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. +. ...++..+.++|.+|+..+|.+||+..+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 209 PPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0 00 01245678899999999999999999766553
No 312
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.91 E-value=4.7e-24 Score=212.59 Aligned_cols=217 Identities=14% Similarity=0.190 Sum_probs=157.8
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..||+|+||.||++.. .+|..||||........ ....+.+|+.++..+.|+++ +.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~~i--v~ 81 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ----------------------RRELLFNEVVIMRDYQHENV--VE 81 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh----------------------HHHHHHHHHHHHHhcCCcch--hh
Confidence 5699999999999988 57999999987532110 01235578999999987653 33
Q ss_pred eee----cCCceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCC
Q 012042 176 AVD----CNRHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFP 246 (472)
Q Consensus 176 ~i~----~~~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG 246 (472)
+++ .+..++||||++|++|..+.... . ...++.+++.++.+||+.|++||||+|.||+++.++.++|+|||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg 161 (292)
T cd06657 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG 161 (292)
T ss_pred eeeEEEeCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccc
Confidence 332 36789999999999998875322 1 12478899999999999999999999999999999999999999
Q ss_pred CceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcch---h--------h
Q 012042 247 QMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K--------E 314 (472)
Q Consensus 247 ~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~--------~ 314 (472)
.+....... .....+.+ ..++ +|+......++.++|+||+|+++++++++..+... . .
T Consensus 162 ~~~~~~~~~---------~~~~~~~~-~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~ 231 (292)
T cd06657 162 FCAQVSKEV---------PRRKSLVG-TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231 (292)
T ss_pred cceeccccc---------cccccccc-CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Confidence 886543210 00011112 2334 44444456778999999999999999987542110 0 0
Q ss_pred h-----hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 L-----AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 ~-----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....+..+.++|.+|+..+|.+||+..+...
T Consensus 232 ~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 232 LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0 11245778899999999999999999987665
No 313
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.91 E-value=6.2e-24 Score=209.62 Aligned_cols=219 Identities=14% Similarity=0.141 Sum_probs=148.1
Q ss_pred eecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 98 QLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
.||+|+||.||+|.+ .+|+.||||++.......... ......|..++..+... .+|.+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~--~~~~i 59 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-------------------ETLALNERIMLSLVSTG--DCPFI 59 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh-------------------HHHHHHHHHHHHHHHhC--CCCcE
Confidence 489999999999988 468999999886432111000 00112233333333221 12333
Q ss_pred ee-------cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 177 VD-------CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 177 i~-------~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
+. ....++||||++|++|..++... ....++.|++.+|.|||+.||+||||||.||+++.++.++|+
T Consensus 60 ~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~ 139 (278)
T cd05606 60 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS 139 (278)
T ss_pred eeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEc
Confidence 32 25678999999999998765322 112478899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh---------
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK--------- 313 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--------- 313 (472)
|||.+......... ...+.....+|+.+. ...++.++|+||+|+++++++++..+....
T Consensus 140 dfg~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~ 208 (278)
T cd05606 140 DLGLACDFSKKKPH-----------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 208 (278)
T ss_pred cCcCccccCccCCc-----------CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH
Confidence 99998754322110 112222333455443 335889999999999999999975432110
Q ss_pred -h------hhccCCCHHHHHHHHHHHhcCcccCC-----CCCCCCCC
Q 012042 314 -E------LAASGFTRKDQDVIQKFIGGSIEESG-----SDDEGSDD 348 (472)
Q Consensus 314 -~------~~~~~~s~~~~~~l~k~l~~~p~~R~-----s~~e~~~~ 348 (472)
. .....++.++.++|.+|+..+|.+|| +..+..+.
T Consensus 209 ~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 209 RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 0 01234678999999999999999999 55555543
No 314
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.91 E-value=1.8e-24 Score=225.25 Aligned_cols=203 Identities=19% Similarity=0.211 Sum_probs=157.5
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..||+|+.|.||+|+.. ++.||||..+. .-+.+++-|++|.| |++
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~e-----------------------------lkETdIKHLRkLkH-----~NI 174 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVRE-----------------------------LKETDIKHLRKLKH-----PNI 174 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhh-----------------------------hhhhhHHHHHhccC-----cce
Confidence 78999999999999875 68899995431 12357888999987 455
Q ss_pred eec-------CCceeEEeecCCCChhhhhccCC---h---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 177 VDC-------NRHCVIMSLVQGYPLVQVNQLQN---P---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 177 i~~-------~~~~LVMEyi~G~~L~~l~~~~~---~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
|.+ --.|||||||..+.|+.++.... | ..+..+|+.+|.|||.+.|||||||.-||||..+..|||+
T Consensus 175 I~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIs 254 (904)
T KOG4721|consen 175 ITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKIS 254 (904)
T ss_pred eeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEec
Confidence 543 34789999999999999875442 2 2467899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc--chh--------
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF--LDK-------- 313 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~--l~~-------- 313 (472)
|||.++... |....-.|.++--.++|++...+..+.+.|||||||++.+++|+..+. ++.
T Consensus 255 DFGTS~e~~----------~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG 324 (904)
T KOG4721|consen 255 DFGTSKELS----------DKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG 324 (904)
T ss_pred cccchHhhh----------hhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc
Confidence 999997553 222222344444456777777899999999999999999999975432 111
Q ss_pred ----hh-hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 314 ----EL-AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 314 ----~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.+ .++...+.|+-+|..|....|.+|||-+.
T Consensus 325 sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrq 360 (904)
T KOG4721|consen 325 SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQ 360 (904)
T ss_pred CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHH
Confidence 11 14567778999999999999999998653
No 315
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.91 E-value=5e-24 Score=205.48 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=153.5
Q ss_pred ecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||.|+||.||+|.+. +|+.|+||++......... ....+.+|+.++.++.|+++ +..+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~-------------------~~~~~~~e~~~l~~~~h~~i--~~~~ 59 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKN-------------------QVDQVLTERDILSQAQSPYV--VKLY 59 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhh-------------------HHHHHHHHHHHHHhCCCcch--hHHH
Confidence 689999999999995 5999999988633211100 11235678999999987653 3322
Q ss_pred e----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 178 D----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 178 ~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
. ....|++|||++|++|..++... . ...++.||+.+|.+||+.|++||||+|.||+++.++.++|+|||+
T Consensus 60 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~ 139 (265)
T cd05579 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGL 139 (265)
T ss_pred HheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEeccc
Confidence 2 25679999999999998875421 1 124789999999999999999999999999999999999999998
Q ss_pred ceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh-----
Q 012042 248 MVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL----- 315 (472)
Q Consensus 248 A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~----- 315 (472)
+.....+..... .................+|+.......+.++|+||||+++++.+++....... .+
T Consensus 140 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 218 (265)
T cd05579 140 SKVGLVRRQINL-NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI 218 (265)
T ss_pred chhcccCccccc-ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc
Confidence 864432211000 00000111112222223444445566888999999999999999875432100 00
Q ss_pred h---ccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 316 A---ASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 316 ~---~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
. ...++..+..+|.+|+..+|.+||+.
T Consensus 219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~ 248 (265)
T cd05579 219 EWPEDVEVSDEAIDLISKLLVPDPEKRLGA 248 (265)
T ss_pred CCCccccCCHHHHHHHHHHhcCCHhhcCCC
Confidence 0 11237888999999999999999998
No 316
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.91 E-value=3.5e-24 Score=211.17 Aligned_cols=211 Identities=11% Similarity=0.085 Sum_probs=143.5
Q ss_pred eecccCceeEEEEEeC-C------------------------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHh
Q 012042 98 QLGVGKESDIFEVARE-D------------------------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLS 152 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~-~------------------------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~ 152 (472)
.||+|+||.||+|... + ...||||++.......
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~---------------------- 59 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDI---------------------- 59 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHH----------------------
Confidence 5899999999999741 1 1358888764321100
Q ss_pred HHHHHHHHHHHHHhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCC
Q 012042 153 RLAALKEFAFMKALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHG 221 (472)
Q Consensus 153 r~~a~rE~~~L~~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~G 221 (472)
...+..|+.++..+.|+++ +.++++ ...++||||++|++|..++... .+ ..++.||+.+|.|||+.|
T Consensus 60 ~~~~~~~~~~~~~l~h~ni--v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 137 (274)
T cd05076 60 ALAFFETASLMSQVSHIHL--AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN 137 (274)
T ss_pred HHHHHHHHHHHhcCCCCCe--eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 1123467888888888653 444442 5689999999999998775321 12 247889999999999999
Q ss_pred ceeccCCCCcEEEcCCC-------cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchhe
Q 012042 222 LIHCDFNEFNIMIDDDE-------KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDT 293 (472)
Q Consensus 222 IIHrDLKP~NILl~~~g-------~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDi 293 (472)
|+||||||.|||++..+ .++++|||.+....... .. .+....++|+... ...++.++|+
T Consensus 138 iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~---------~~----~~~~~~~aPe~~~~~~~~~~~~Dv 204 (274)
T cd05076 138 LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE---------ER----VERIPWIAPECVPGGNSLSTAADK 204 (274)
T ss_pred ccCCCCCcccEEEeccCcccCccceeeecCCcccccccccc---------cc----ccCCcccCchhhcCCCCCCcHHHH
Confidence 99999999999997543 37999999875432110 00 1111223444332 3568999999
Q ss_pred eccCchhhhhh-hccCCcch---h---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 294 DEGSRLSFASI-SKTAGFLD---K---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 294 ySlG~~~f~~~-t~~~~~l~---~---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
||||+++|+.. ++..+... . ..........+.++|.+|+..+|++|||..+-
T Consensus 205 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i 269 (274)
T cd05076 205 WSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTI 269 (274)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHH
Confidence 99999999975 33322110 0 01123355778999999999999999998654
No 317
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.91 E-value=6.3e-24 Score=208.42 Aligned_cols=221 Identities=14% Similarity=0.128 Sum_probs=154.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|++|.||+|.+. +|..||||+++....... ...+.+|+.++.++.|+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~h~~i 60 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT---------------------PSTAIREISLMKELKHENI 60 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccc---------------------hHHHHHHHHHHHhhcCCCE
Confidence 466789999999999999994 699999998864321100 0123469999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC------C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+.+++. +..+|||||++| +|..++... . ...++.+++.+|.+||+.||+||||+|.||++++++
T Consensus 61 --~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~ 137 (284)
T cd07836 61 --VRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG 137 (284)
T ss_pred --eeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence 444442 668999999997 665543211 1 124789999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+.....+... ...........+|+.... ..++.++|+||||+++++++++.......
T Consensus 138 ~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~ 208 (284)
T cd07836 138 ELKLADFGLARAFGIPVNT---------FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED 208 (284)
T ss_pred cEEEeecchhhhhcCCccc---------cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 9999999998654322110 000011112233443322 45688999999999999999875321100
Q ss_pred --------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.......+..+.++|.+|++.+|.+||+..+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 279 (284)
T cd07836 209 QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL 279 (284)
T ss_pred HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHh
Confidence 000123567778999999999999999976543
No 318
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.91 E-value=5.2e-24 Score=208.31 Aligned_cols=222 Identities=14% Similarity=0.148 Sum_probs=157.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|.. .+|+.+++|.++....... ......+|+.+|+++.|+++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 60 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG--------------------IPKTALREIKLLKELNHPNI 60 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccch--------------------hHHHHHHHHHHHHHhcCCCc
Confidence 34568899999999999998 4789999998764322110 01134578999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc---C-C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---Q-N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~-~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++. ....+++|||+++ +|.+.+.. . . ...++.+++.+|.+||..||+|+||||.||+++.++.+
T Consensus 61 --~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~ 137 (283)
T cd05118 61 --IKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVL 137 (283)
T ss_pred --chHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcE
Confidence 22222 2668999999987 66554322 1 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC-CCCcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG-DDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~-~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||.+.....+.. . ........+..+|+..... .++.++|+||||+++|+++++.......
T Consensus 138 ~l~df~~~~~~~~~~~------~---~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~ 208 (283)
T cd05118 138 KLADFGLARSFGSPVR------P---YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL 208 (283)
T ss_pred EEeeeeeeEecCCCcc------c---ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999999876543320 0 0111222333455544343 6899999999999999999975321000
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++.++..+|.+|+..+|.+||+.++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 209 FKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred HHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence 001124677888999999999999999987653
No 319
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.91 E-value=1e-23 Score=214.94 Aligned_cols=224 Identities=13% Similarity=0.111 Sum_probs=157.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|..||||.+........ ....+.+|+.+|.++.|+++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 76 (343)
T cd07880 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL--------------------FAKRAYRELRLLKHMKHENV 76 (343)
T ss_pred eEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH--------------------HHHHHHHHHHHHHhcCCCCc
Confidence 66789999999999999998 5799999998753211110 11235579999999988764
Q ss_pred Cc-ceeee-------cCCceeEEeecCCCChhhhhcc-CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PV-PNAVD-------CNRHCVIMSLVQGYPLVQVNQL-QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~v-P~~i~-------~~~~~LVMEyi~G~~L~~l~~~-~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
.. ...+. ....++||+|+ |.+|..+... ..+ ..++.||+.+|.+||+.||+||||||.||+++.++
T Consensus 77 v~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07880 77 IGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC 155 (343)
T ss_pred cceeeeecCCccccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 21 11111 13458999999 6678776532 112 24788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+....... ..+.......+|+.+.. ..++.++|+||||+++++++++....-..
T Consensus 156 ~~kl~dfg~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 223 (343)
T cd07880 156 ELKILDFGLARQTDSEM------------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD 223 (343)
T ss_pred CEEEeecccccccccCc------------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999987543211 11112222234443322 45788999999999999998875322100
Q ss_pred ----------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 ----------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ----------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
......++..+.++|.+|+..+|.+||++.+.....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 224 QLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred HHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000134677788999999999999999998877644
No 320
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.91 E-value=6.1e-24 Score=204.49 Aligned_cols=221 Identities=15% Similarity=0.151 Sum_probs=160.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||++.+ .+++.+|||.+......-. ....+.+|+.+++++.|+++
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 61 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQK--------------------EREDAVNEIRILASVNHPNI 61 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHH--------------------HHHHHHHHHHHHHhCCCCCc
Confidence 46678999999999999988 4789999998763321110 11234578999999987654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc------C-Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL------Q-NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~------~-~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+.. ....++||||++|.+|..++.. . .. ..++.+++.+|.+||+.|++|+||+|.||+++.+
T Consensus 62 --~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~ 139 (256)
T cd08530 62 --ISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN 139 (256)
T ss_pred --hhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC
Confidence 33332 2668999999999999876532 1 11 2477899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----- 312 (472)
+.++|+|||.+....... .+. ..+.....+|+.+....++.++|+||||+.+++++++..+...
T Consensus 140 ~~~kl~d~g~~~~~~~~~-----~~~------~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 208 (256)
T cd08530 140 DLVKIGDLGISKVLKKNM-----AKT------QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208 (256)
T ss_pred CcEEEeeccchhhhccCC-----ccc------ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999999987553320 000 0112223455555667788899999999999999987533210
Q ss_pred --h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 --K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 --~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. ......++.++..+|.+|+..+|++||+..+-.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 251 (256)
T cd08530 209 LRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKIL 251 (256)
T ss_pred HHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 0 011235778899999999999999999987643
No 321
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.91 E-value=1.8e-23 Score=202.89 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=146.9
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH-hhhCCCCcc
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA-LEDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~-L~~~gi~vP 174 (472)
+.||.|+||.||+|.+ .+|+.||||+++........ .. .....|..++.. +.|++ ++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~--~~-----------------~~~~~e~~~~~~~~~~~~--i~ 60 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKN--QV-----------------TNVKAERAIMMIQGESPY--VA 60 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHH--HH-----------------HHHHHHHHHHhhcCCCCC--ee
Confidence 5689999999999988 46899999988532110000 00 011234333333 33433 33
Q ss_pred eeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 175 NAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 175 ~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.++.. +..|++|||++|++|..++... . ...++.|++.+|.+||+.|++||||+|.||+++.++.++|+|
T Consensus 61 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~d 140 (260)
T cd05611 61 KLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTD 140 (260)
T ss_pred eeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEee
Confidence 44332 5679999999999998876432 1 234788999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcch----h---hh-
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----K---EL- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----~---~~- 315 (472)
||++...... ..+.+ ...| +|+......++.++|+||||+++++++++..+... . .+
T Consensus 141 fg~~~~~~~~-------------~~~~~-~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 206 (260)
T cd05611 141 FGLSRNGLEN-------------KKFVG-TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL 206 (260)
T ss_pred cccceecccc-------------ccCCC-CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 9998643220 01111 2233 44444445578999999999999999987543210 0 00
Q ss_pred ---------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 316 ---------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 316 ---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
....++..+.++|.+|+..+|++||++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 243 (260)
T cd05611 207 SRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGAN 243 (260)
T ss_pred hcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCC
Confidence 1124678899999999999999999885
No 322
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.91 E-value=9.6e-24 Score=210.82 Aligned_cols=224 Identities=12% Similarity=0.035 Sum_probs=155.3
Q ss_pred eecceecccCceeEEEEEe-CCCC----EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGT----VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~----~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
++.+.||+|+||.||+|.+ .+|. .||+|++....... ....+.+|+.++.++.|
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~~~~l~h 68 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK---------------------ANVEFMDEALIMASMDH 68 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHH---------------------HHHHHHHHHHHHHhCCC
Confidence 4568899999999999987 3454 57888775322110 01124578999999988
Q ss_pred CCCCcceeee---cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+++ .+.++ ....+++|||+++++|.+.+... .+ ..++.+++.+|.|||++||+||||||.||+++.++
T Consensus 69 ~ni--v~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~ 146 (303)
T cd05110 69 PHL--VRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN 146 (303)
T ss_pred CCc--ccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC
Confidence 764 33333 24567999999999988875321 11 24778999999999999999999999999999889
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h-
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~- 313 (472)
.++|+|||.+.......... ...........++|+......++.++|+||||++++++++ +..+... .
T Consensus 147 ~~kL~Dfg~~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~ 219 (303)
T cd05110 147 HVKITDFGLARLLEGDEKEY-------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE 219 (303)
T ss_pred ceEEccccccccccCccccc-------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999997553211100 0000111112234554456778999999999999999887 3222110 0
Q ss_pred --hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ .....+..+..+|.+|+..+|++||+.++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 220 IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 11235677889999999999999999988644
No 323
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.91 E-value=1.2e-23 Score=213.01 Aligned_cols=228 Identities=14% Similarity=0.126 Sum_probs=156.1
Q ss_pred eeecceecccCceeEEEEEeC-C--CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-h
Q 012042 93 TAVGRQLGVGKESDIFEVARE-D--GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-D 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~--g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~ 168 (472)
|.+.+.||+|+||.||+|.+. + +..||||.++....... ....+.+|+.++.++. |
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~~h 61 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI--------------------LAKRALRELKLLRHFRGH 61 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccch--------------------hHHHHHHHHHHHHHhcCC
Confidence 456789999999999999984 4 78999998753210000 0113457999999985 5
Q ss_pred CCCCcceeeec--------CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 169 HGFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 169 ~gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
+++ ++.+.. ...+++|+|+.+ +|...+... . ...++.||+.+|.+||..||+||||||.|||+
T Consensus 62 ~~i--v~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili 138 (332)
T cd07857 62 KNI--TCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV 138 (332)
T ss_pred CCh--heeeeeeeeccccCCcEEEEEecccC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE
Confidence 442 343331 346889999874 676654321 1 12478899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
+.++.++|+|||.+......... .......+.+.....+|+.... ..++.++|+||+|+++++++++.......
T Consensus 139 ~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 139 NADCELKICDFGLARGFSENPGE-----NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred cCCCCEEeCcCCCceeccccccc-----ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 99999999999999865432111 0011122333333345553333 46789999999999999988765321100
Q ss_pred --------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 --------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 --------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.....+.+..+..+|.+|+..+|++||+..+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 214 DYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00112356788899999999999999998876543
No 324
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.91 E-value=7e-24 Score=213.61 Aligned_cols=227 Identities=14% Similarity=0.158 Sum_probs=162.0
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|... +|..||||.+........ ....+.+|+.+++.+.|+++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 61 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLI--------------------DAKRILREIKLLRHLRHENI 61 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccch--------------------hhhhHHHHHHHHHhcCCcch
Confidence 567899999999999999984 589999998753211010 01134578999999987653
Q ss_pred Ccceeee---------cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVD---------CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~---------~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
..+++ .+..|++|||+++ +|.+++... ....++.+|+.+|.+||+.||+||||||.|||++.
T Consensus 62 --~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~ 138 (330)
T cd07834 62 --IGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS 138 (330)
T ss_pred --hhhhhhhcccCcccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 22222 1367999999985 676654322 11247889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC-CCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG-DDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~-~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||.+.....+... ......++...+..+|+..... .++.++|+||||+.+++++++.......
T Consensus 139 ~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 139 NCDLKICDFGLARGVDPDEDE------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred CCCEEEcccCceEeecccccc------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 999999999999876543211 0112223333444556554444 7899999999999999998875322100
Q ss_pred ------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.....+++..+.++|.+|++.+|++||+.++....
T Consensus 213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00113467788899999999999999999887653
No 325
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.91 E-value=1.4e-23 Score=203.95 Aligned_cols=213 Identities=14% Similarity=0.129 Sum_probs=153.3
Q ss_pred ecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||.|++|.||+|.+. +++.||||++......... ....+.+|+.++.++.|+++ +.++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~l~h~~i--~~~~ 59 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETG-------------------QQEHIFSEKEILEECNHPFI--VKLY 59 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhh-------------------HHHHHHHHHHHHHhCCCCCE--eeee
Confidence 699999999999994 5899999998632211100 01235678999999987653 3333
Q ss_pred e----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 178 D----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 178 ~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
+ .+..+++|||++|++|.+++... .+ ..++.+|+.+|.+||++|++|+||+|.||+++.++.++|+|||.
T Consensus 60 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~ 139 (262)
T cd05572 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGF 139 (262)
T ss_pred eeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCc
Confidence 3 25689999999999998876432 12 23778999999999999999999999999999999999999999
Q ss_pred ceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--h-------hhh---
Q 012042 248 MVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--D-------KEL--- 315 (472)
Q Consensus 248 A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~-------~~~--- 315 (472)
+........ ...+.+....++|+......++.++|+||+|+++++.+++..+.. + ..+
T Consensus 140 ~~~~~~~~~----------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 209 (262)
T cd05572 140 AKKLKSGQK----------TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKG 209 (262)
T ss_pred ccccCcccc----------cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhcc
Confidence 876543210 001122222334444445668899999999999999998754321 1 000
Q ss_pred -----hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 316 -----AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 316 -----~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.+...+.++..+|.+|+..+|++||+.
T Consensus 210 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 241 (262)
T cd05572 210 NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGN 241 (262)
T ss_pred CCCCCCCcccCHHHHHHHHHHccCChhhCcCC
Confidence 112346788999999999999999994
No 326
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.91 E-value=3.6e-24 Score=208.50 Aligned_cols=219 Identities=16% Similarity=0.139 Sum_probs=152.6
Q ss_pred ceecccCceeEEEEEeCC-------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 97 RQLGVGKESDIFEVARED-------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~-------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
+.||.|+||.||+|...+ +..+|||.+....... ....+.+|+.+|.++.|+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h~ 59 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQ---------------------EKKEFLKEAHLMSNFNHP 59 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchh---------------------hHHHHHHHHHHHHhcCCC
Confidence 368999999999998732 2579999764321100 011345799999999886
Q ss_pred CCCcceeee----cCCceeEEeecCCCChhhhhccC----------C---hHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 170 GFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----------N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 170 gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----------~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
++ ..+++ ....++||||++|++|.+.+... . ...++.+++.+|.|||+.|++|+||||.||
T Consensus 60 ~i--~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~ni 137 (269)
T cd05044 60 NI--VKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNC 137 (269)
T ss_pred Ce--eeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheE
Confidence 54 33333 25689999999999998875321 1 123778999999999999999999999999
Q ss_pred EEcCCC-----cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-c
Q 012042 233 MIDDDE-----KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-K 306 (472)
Q Consensus 233 Ll~~~g-----~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~ 306 (472)
+++.++ .++|+|||++.....+... ... .........++|+.+..+.++.++|+||||+.++++++ +
T Consensus 138 l~~~~~~~~~~~~~l~dfg~~~~~~~~~~~---~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g 210 (269)
T cd05044 138 LVSEKGYDADRVVKIGDFGLARDIYKSDYY---RKE----GEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLG 210 (269)
T ss_pred EEecCCCCCCcceEECCccccccccccccc---ccC----cccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcC
Confidence 999877 7999999998755322110 000 00011112234555566788999999999999999887 4
Q ss_pred cCCcc-----hh--h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 307 TAGFL-----DK--E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 307 ~~~~l-----~~--~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+.. +. . .....++..+.++|.+|+..+|.+||+.++-
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 263 (269)
T cd05044 211 QQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRI 263 (269)
T ss_pred CCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHH
Confidence 32211 00 0 1123567788999999999999999998753
No 327
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.90 E-value=7.1e-24 Score=206.71 Aligned_cols=228 Identities=19% Similarity=0.217 Sum_probs=157.3
Q ss_pred eeecceecccCceeEEEEEeC--CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH-hhhC
Q 012042 93 TAVGRQLGVGKESDIFEVARE--DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA-LEDH 169 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~--~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~-L~~~ 169 (472)
|.+.+.||+|+||.||+|.+. .++.+|||.++.....+...+..+ ........+|+.++.+ +.|+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~------------~~~~~~~~~e~~~l~~~~~h~ 69 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRER------------DKSIGDIVSEVTIIKEQLRHP 69 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccc------------hHHHHHHHHHHHHHhhcCCCC
Confidence 456788999999999999984 478899998864332221100000 0011233467777765 5555
Q ss_pred CCCcceeee----cCCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEE
Q 012042 170 GFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMI 234 (472)
Q Consensus 170 gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl 234 (472)
++ +.++. .+..+++|||++|++|..++.. ..+ ..++.+++.+|.+||. .||+|+||+|.||++
T Consensus 70 ~i--~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~ 147 (269)
T cd08528 70 NI--VRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML 147 (269)
T ss_pred Ce--eeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE
Confidence 43 33333 2678999999999999876421 111 2477899999999995 789999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcchh
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
+.++.++|+|||.+.....+. ...... ....| +|+......++.++|+||||+.+++++++..+....
T Consensus 148 ~~~~~~~l~dfg~~~~~~~~~----------~~~~~~-~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~ 216 (269)
T cd08528 148 GEDDKVTITDFGLAKQKQPES----------KLTSVV-GTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST 216 (269)
T ss_pred CCCCcEEEecccceeeccccc----------cccccc-CcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc
Confidence 999999999999997543221 111112 22334 444445567899999999999999999875432110
Q ss_pred ---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
......++.++.++|.+|+..+|++||+..|-
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~ 263 (269)
T cd08528 217 NMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQV 263 (269)
T ss_pred CHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHH
Confidence 01112578899999999999999999997664
No 328
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.90 E-value=1.4e-23 Score=206.10 Aligned_cols=222 Identities=13% Similarity=0.143 Sum_probs=155.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||.|++|.||+|.+ .+|..||||++......-.. ...+.+|+.++.++.|+++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~~~~i 60 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGV--------------------PSTAIREISLLKELNHPNI 60 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccc--------------------hhHHHHHHHHHHhcCCCCc
Confidence 35578899999999999998 47999999988643211000 0123468999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
++++. .+..+++|||++ .+|..++... .+ ..++.+++.+|.+||+.|++||||+|.||+++.++.
T Consensus 61 --v~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~ 137 (283)
T cd07835 61 --VRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGA 137 (283)
T ss_pred --cCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCc
Confidence 33332 267899999996 4677664321 11 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
++|+|||.+.....+.... ..........+|+.... ..++.++|+||||+++++++++.......
T Consensus 138 ~~l~df~~~~~~~~~~~~~---------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 208 (283)
T cd07835 138 LKLADFGLARAFGVPVRTY---------THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ 208 (283)
T ss_pred EEEeecccccccCCCcccc---------CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999987543321110 00011122234443333 35688999999999999999875321000
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.++|.+|++.+|.+||+.++-.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 209 LFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred HHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 001245677888999999999999999986643
No 329
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.90 E-value=1.2e-23 Score=213.62 Aligned_cols=225 Identities=12% Similarity=0.116 Sum_probs=158.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+ .+|+.||||.++........ ...+.+|+.+|..+.|+++
T Consensus 7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~ni 66 (337)
T cd07858 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRID--------------------AKRTLREIKLLRHLDHENV 66 (337)
T ss_pred eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccch--------------------hHHHHHHHHHHHhcCCCCc
Confidence 66788999999999999998 57999999987532111100 1124469999999987653
Q ss_pred Ccceeee---------cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVD---------CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~---------~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
...++ ....|+||||+.+ +|..++... ....++.+++.+|.+||+.|++||||||.|||++.
T Consensus 67 --~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~ 143 (337)
T cd07858 67 --IAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA 143 (337)
T ss_pred --cchHHheecccccccCcEEEEEeCCCC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence 22222 1347999999974 666654321 12347889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||.+.....+.. . ...+.......+|+... ...++.++|+||||+++++++++.......
T Consensus 144 ~~~~kL~Dfg~~~~~~~~~~--~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 214 (337)
T cd07858 144 NCDLKICDFGLARTTSEKGD--F-------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY 214 (337)
T ss_pred CCCEEECcCccccccCCCcc--c-------ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh
Confidence 99999999999975532211 0 01112222333444332 246889999999999999988865322100
Q ss_pred ------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 ------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
......++.++.++|.+|+..+|++|||.++.....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~ 292 (337)
T cd07858 215 VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292 (337)
T ss_pred HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCc
Confidence 001135678888999999999999999988876654
No 330
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.90 E-value=1.3e-23 Score=205.79 Aligned_cols=216 Identities=11% Similarity=0.059 Sum_probs=142.8
Q ss_pred eecccCceeEEEEEeCCC---CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 98 QLGVGKESDIFEVAREDG---TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~~g---~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.||+|+||.||+|...++ ..+++|.++.... .. ....+.+|+.++..+.|+++ +
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~--------------------~~~~~~~e~~~~~~l~h~~i--v 58 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SK--------------------EQNEFLQQGDPYRILQHPNI--L 58 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hH--------------------HHHHHHHHHHHHhccCCcch--h
Confidence 589999999999976433 3466776543211 00 01234578888888888653 3
Q ss_pred eeee----cCCceeEEeecCCCChhhhhccC------Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 175 NAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 175 ~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++ ....|+||||++|++|..++... .+ ..++.+|+.+|.|||+.||+||||||.|||++.++.+
T Consensus 59 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~ 138 (268)
T cd05086 59 QCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTV 138 (268)
T ss_pred heEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccE
Confidence 3333 25679999999999998875321 11 2467899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccc-------cCCCCcchheeccCchhhhhhhccCCcc-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETT-------DGDDGSDIDTDEGSRLSFASISKTAGFL- 311 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~-------~~~~~~~sDiySlG~~~f~~~t~~~~~l- 311 (472)
+|+|||.+....... ..... ..... ...| +|+.+. ...++.++|+||||+++|++++....+.
T Consensus 139 ~l~Dfg~~~~~~~~~---~~~~~----~~~~~-~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 139 KVGDYGIGPSRYKED---YIETE----DDKCV-PLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS 210 (268)
T ss_pred EecccccccccCcch---hhhcc----cCCcC-cccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence 999999875321110 00000 00111 1222 333221 2245778999999999999886422111
Q ss_pred --h-h----------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 312 --D-K----------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 312 --~-~----------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. . ......++..+.++|..|+ .+|++||++++-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i 262 (268)
T cd05086 211 HLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEV 262 (268)
T ss_pred CCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHH
Confidence 0 0 0112357778888898888 679999998764
No 331
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.90 E-value=1.7e-23 Score=213.58 Aligned_cols=224 Identities=13% Similarity=0.145 Sum_probs=157.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||.+......... ...+.+|+.++.++.|+++
T Consensus 19 y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~Ei~~l~~l~h~~i 78 (345)
T cd07877 19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--------------------AKRTYRELRLLKHMKHENV 78 (345)
T ss_pred eEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH--------------------HHHHHHHHHHHHHcCCCcc
Confidence 67789999999999999988 57999999987533211110 1134579999999988763
Q ss_pred C-cceeee-------cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 P-VPNAVD-------CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~-vP~~i~-------~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
. ....+. .+..|++++++ |++|..++... ....++.|++.+|.|||+.||+||||||.||+++.++
T Consensus 79 v~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 79 IGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred cceeeeeeecccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC
Confidence 1 111111 13367888886 67777664322 1224788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh---h
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK---E 314 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~---~ 314 (472)
.++|+|||.+...... ...+.+.....+|+.+.. ..++.++|+||||+++++++++....... .
T Consensus 158 ~~kl~dfg~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~ 225 (345)
T cd07877 158 ELKILDFGLARHTDDE------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 225 (345)
T ss_pred CEEEeccccccccccc------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999998753221 111222333334443323 56788999999999999999875432100 0
Q ss_pred ---------------h--------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 315 ---------------L--------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 315 ---------------~--------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
+ ...+.+.++.++|.+|+..+|.+||++.+...-.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 226 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred HHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 0 0013567788999999999999999998877643
No 332
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.90 E-value=1.2e-23 Score=213.30 Aligned_cols=229 Identities=12% Similarity=0.144 Sum_probs=158.7
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.+. +|+.+|||.+......... .....+|+.++.++ .|++
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~~h~n 68 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATD--------------------AQRTFREIMFLQELGDHPN 68 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchh--------------------hhhhhHHHHHHHHhcCCCC
Confidence 455788999999999999984 6889999976421100000 01244799999999 7765
Q ss_pred CCcceeeec------CCceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ ..+++. ...++||||+++ +|...+... . ...++.+|+.+|.+||+.||+||||||.||+++.++.
T Consensus 69 i--~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~ 145 (337)
T cd07852 69 I--VKLLNVIKAENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCR 145 (337)
T ss_pred c--cceeeeeccCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc
Confidence 3 333331 246999999986 776654322 1 1247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcch---h--
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLD---K-- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~-- 313 (472)
++|+|||.+.......... .......+++.....+|+... ...++.++|+||||+++++++++...... .
T Consensus 146 ~kl~d~g~~~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~ 221 (337)
T cd07852 146 VKLADFGLARSLSELEENP----ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ 221 (337)
T ss_pred EEEeeccchhccccccccc----cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 9999999987553221100 001222344443334555432 35678899999999999999987532210 0
Q ss_pred ---------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++.++.++|.+|+..+|++|||..+...-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 222 LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00012357788999999999999999998887753
No 333
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.90 E-value=2e-23 Score=206.02 Aligned_cols=222 Identities=18% Similarity=0.213 Sum_probs=152.9
Q ss_pred eeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.+.+.||.|++|.||++... +++.||||+++..... ... ........|+.++.++.+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~-~~~-----------------~~~~~~~~E~~~l~~~~~ 63 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIV-QKA-----------------KTAEHTRTERQVLEAVRR 63 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHH-hhh-----------------hHHHHHHHHHHHHHhccC
Confidence 567789999999999999852 5788999988632100 000 011234579999999954
Q ss_pred -CCCCcceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 -HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 -~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ +.++. ....++||||++|++|...+... .+ ..++.|++.+|.+||..|++||||+|.||+++.+
T Consensus 64 ~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~ 141 (288)
T cd05583 64 CPFL--VTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSE 141 (288)
T ss_pred Ccch--hhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence 332 22222 15578999999999998765322 11 2367799999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccC--CCCcchheeccCchhhhhhhccCCcc---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDG--DDGSDIDTDEGSRLSFASISKTAGFL--- 311 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~--~~~~~sDiySlG~~~f~~~t~~~~~l--- 311 (472)
+.++|+|||.+.....+... ++ ..+.+ ...| +|+..... ..+.++|+||||+++++++++..+.-
T Consensus 142 ~~~~l~dfg~~~~~~~~~~~----~~----~~~~~-~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 142 GHVVLTDFGLSKEFLAEEEE----RA----YSFCG-TIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred CCEEEEECcccccccccccc----cc----ccccC-CccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 99999999998754322110 00 01112 2333 44433232 26889999999999999998653320
Q ss_pred ----hhhh----------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 312 ----DKEL----------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 312 ----~~~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
...+ ....++..+.++|.+|+..+|++|||..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~ 258 (288)
T cd05583 213 EQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGAN 258 (288)
T ss_pred ccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcc
Confidence 0000 1234788899999999999999999965
No 334
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.90 E-value=9.4e-25 Score=244.22 Aligned_cols=229 Identities=15% Similarity=0.220 Sum_probs=173.7
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.-+..||.|.||.||-|.+ .+|.-.|||-++.....-+.++ ....|..+|..|+|+++.
T Consensus 1238 qrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~--------------------~i~eEm~vlE~lnHpNlV 1297 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFK--------------------LIAEEMKVLEGLNHPNLV 1297 (1509)
T ss_pred ccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCc--------------------chHHHHHHHHhccCcccc
Confidence 3468899999999999999 5699999997764432211111 123699999999997765
Q ss_pred cceeeec--CCceeEEeecCCCChhhhhccCC--h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEe
Q 012042 173 VPNAVDC--NRHCVIMSLVQGYPLVQVNQLQN--P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMID 244 (472)
Q Consensus 173 vP~~i~~--~~~~LVMEyi~G~~L~~l~~~~~--~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIID 244 (472)
.|..|.. ...+|.||||+|++|..+++... + .-+..|++.++.|||++|||||||||.||+++.+|-+|+.|
T Consensus 1298 ~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~D 1377 (1509)
T KOG4645|consen 1298 RYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGD 1377 (1509)
T ss_pred ccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeec
Confidence 5555544 45799999999999999876542 2 23677999999999999999999999999999999999999
Q ss_pred CCCceecCcccchhhhccccchhhhhcccccccccccccc---CCCCcchheeccCchhhhhhhccCC--cch--hhh--
Q 012042 245 FPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD---GDDGSDIDTDEGSRLSFASISKTAG--FLD--KEL-- 315 (472)
Q Consensus 245 FG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~---~~~~~~sDiySlG~~~f~~~t~~~~--~l~--~~~-- 315 (472)
||.|+.+..+ ++. +. ..+..+.+++.+++|+...+ .--+-+.||||+||+.+|++|++.+ .+| +.|
T Consensus 1378 FGsa~ki~~~-~~~-~~---~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy 1452 (1509)
T KOG4645|consen 1378 FGSAVKIKNN-AQT-MP---GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY 1452 (1509)
T ss_pred ccceeEecCc-hhc-CC---HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh
Confidence 9999988654 211 11 34567788888888887632 3345578999999999999998642 122 111
Q ss_pred ---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 316 ---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 316 ---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+..+|.+=.+.|+.||+.||+.|+.+.+..|
T Consensus 1453 ~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1453 HVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 12337777789999999999999999876655
No 335
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.90 E-value=2.5e-23 Score=209.12 Aligned_cols=222 Identities=13% Similarity=0.162 Sum_probs=156.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+...+.||+|+||.||+|.+ .+|..|+||++......... ....+.+|+.++.++.|+++
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~-------------------~~~~~~~E~~~l~~l~h~~i 83 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE-------------------KWQDIIKEVKFLQQLKHPNT 83 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchH-------------------HHHHHHHHHHHHHhCCCCCC
Confidence 44457799999999999998 46899999988643211100 01134578999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc-C---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-Q---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+..++ ....|+||||+.|. +...+.. . . ...++.+|+.+|.|||..||+|+||+|.||+++.++.+
T Consensus 84 --v~~~~~~~~~~~~~lv~e~~~~~-l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~ 160 (313)
T cd06633 84 --IEYKGCYLKEHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQV 160 (313)
T ss_pred --ccEEEEEEeCCEEEEEEecCCCC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCE
Confidence 33333 25689999999864 4443321 1 1 12378899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccc---cCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---DGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+|+|||.+...... ..+.+..+..+|+.+. ...++.++|+||||++++++.++..+....
T Consensus 161 kL~dfg~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~ 227 (313)
T cd06633 161 KLADFGSASKSSPA-------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 227 (313)
T ss_pred EEeecCCCcccCCC-------------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 99999988532111 0112222334555431 356888999999999999998876432110
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
......++..++++|.+|++.+|++||++.+.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~ 274 (313)
T cd06633 228 ALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHD 274 (313)
T ss_pred HHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 011235677899999999999999999998887654
No 336
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.90 E-value=2.8e-23 Score=210.73 Aligned_cols=222 Identities=13% Similarity=0.088 Sum_probs=158.3
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||.|+||.||+|.+ .+|+.||||.+........ ....+.+|+.++.++.|++
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hpn 70 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV--------------------LAKRTYRELKLLKHLRHEN 70 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccc--------------------hhHHHHHHHHHHHhcCCCC
Confidence 377789999999999999998 4799999998753211100 0112447999999998876
Q ss_pred CCcceeeec-----CCceeEEeecCCCChhhhhccC-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ ..+.+. ...+++|||+. ++|..++... .+ ..++.+++.+|.+||+.||+||||+|.|||++.++.+
T Consensus 71 i--v~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~ 147 (328)
T cd07856 71 I--ISLSDIFISPLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDL 147 (328)
T ss_pred e--eeEeeeEecCCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCE
Confidence 3 222221 45789999985 5777665321 11 2477899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||.+....... ..+.......+|+...+ ..++.++|+||||+++++++++.......
T Consensus 148 ~l~dfg~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~ 215 (328)
T cd07856 148 KICDFGLARIQDPQM------------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQF 215 (328)
T ss_pred EeCccccccccCCCc------------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999986432211 11222223344554333 56889999999999999999875322100
Q ss_pred --------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 --------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 --------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.....+++.++.++|.+|+..+|++||++++....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 216 SIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00012467888999999999999999999877654
No 337
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.90 E-value=2.6e-23 Score=209.26 Aligned_cols=220 Identities=13% Similarity=0.186 Sum_probs=155.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|...+.||+|+||.||+|.+ .+|..||||.+......... ....+.+|+.+|.++.|+++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~l~h~~i 87 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE-------------------KWQDIIKEVKFLQRIKHPNS 87 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchH-------------------HHHHHHHHHHHHHhCCCCCE
Confidence 45678899999999999998 46899999987532111100 01134579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc-C---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL-Q---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~-~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
...++ .+..++||||++| +|.+.+.. . . ...++.+++.+|.+||..||+||||+|.||+++.++.+
T Consensus 88 --v~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~ 164 (317)
T cd06635 88 --IEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQV 164 (317)
T ss_pred --EEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCE
Confidence 22332 2567899999987 45444321 1 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+|+|||.+....... ...+..+..+|+.+ ..+.++.++|+||||+++++++++..+....
T Consensus 165 kl~dfg~~~~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 231 (317)
T cd06635 165 KLADFGSASIASPAN-------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 231 (317)
T ss_pred EEecCCCccccCCcc-------------cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 999999886432111 11122223344433 2366889999999999999999976432110
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+.++|.+|+..+|.+||+..+-..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 232 ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred HHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 0112357778899999999999999999877654
No 338
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.90 E-value=1.7e-23 Score=201.81 Aligned_cols=203 Identities=10% Similarity=0.051 Sum_probs=143.2
Q ss_pred cCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeee--
Q 012042 102 GKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVD-- 178 (472)
Q Consensus 102 G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~-- 178 (472)
|.+|.||++.+ .+|+.||+|.++.... + .+|...+....+++ ++..+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-~--------------------------~~~~~~~~~~~~~~--i~~~~~~~ 54 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-Y--------------------------SRERLTIIPHCVPN--MVCLHKYI 54 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-h--------------------------hhHHHHHHhcCCCc--eeehhhhe
Confidence 89999999999 5789999998864310 0 12323333333322 122222
Q ss_pred --cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 179 --CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 179 --~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
....+++|||++|++|.+.+... . ...++.+++.+|.+||+.||+||||||.||+++.++.++++|||.+..
T Consensus 55 ~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~ 134 (237)
T cd05576 55 VSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSE 134 (237)
T ss_pred ecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhc
Confidence 25689999999999998765321 1 134788999999999999999999999999999999999999998765
Q ss_pred cCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc------chh--h-hhccCCC
Q 012042 251 VSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF------LDK--E-LAASGFT 321 (472)
Q Consensus 251 ~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~------l~~--~-~~~~~~s 321 (472)
..+.... .......++|+.+....++.++|+||+|+++++++++.... ... . -.+..++
T Consensus 135 ~~~~~~~------------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 202 (237)
T cd05576 135 VEDSCDG------------EAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVS 202 (237)
T ss_pred ccccccc------------CCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCC
Confidence 4332111 11112234555445567889999999999999999875311 000 0 0234578
Q ss_pred HHHHHHHHHHHhcCcccCCCCCCC
Q 012042 322 RKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 322 ~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+..+|.+|++.+|++|+++.+.
T Consensus 203 ~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 203 EEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHHHHHHHccCCHHHhcCCCcc
Confidence 889999999999999999998655
No 339
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.90 E-value=2e-23 Score=212.56 Aligned_cols=227 Identities=13% Similarity=0.120 Sum_probs=157.1
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||.|+||.||+|.+ .+|..||||.+....... ...+.+|+.+|.++.|++
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~----------------------~~~~~~Ei~~l~~l~h~~ 63 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQS----------------------VKHALREIKIIRRLDHDN 63 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCch----------------------HHHHHHHHHHHHhcCCCc
Confidence 467789999999999999998 569999999875432110 113457999999998765
Q ss_pred CCcceeeec------------------CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccC
Q 012042 171 FPVPNAVDC------------------NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDF 227 (472)
Q Consensus 171 i~vP~~i~~------------------~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDL 227 (472)
+ +.+++. ...|+||||+++ +|...+... . ...++.||+.+|.+||+.||+||||
T Consensus 64 i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~di 140 (342)
T cd07854 64 I--VKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDL 140 (342)
T ss_pred c--hhhHhhhcccccccccccccccccceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 3 222221 246899999985 776654321 1 2247889999999999999999999
Q ss_pred CCCcEEEc-CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhh
Q 012042 228 NEFNIMID-DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 228 KP~NILl~-~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t 305 (472)
||.||+++ .++.++|+|||.+.....+.... . ......+..+..+|+.+. ...++.++|+||||++++++++
T Consensus 141 kp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~----~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~ 214 (342)
T cd07854 141 KPANVFINTEDLVLKIGDFGLARIVDPHYSHK----G--YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 214 (342)
T ss_pred CHHHEEEcCCCceEEECCcccceecCCccccc----c--ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHh
Confidence 99999997 45578999999987553221100 0 000011222333444332 3557889999999999999988
Q ss_pred ccCCcchh-------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 306 KTAGFLDK-------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 306 ~~~~~l~~-------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
+...+... ......++.++.++|.+||..+|++||++
T Consensus 215 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 294 (342)
T cd07854 215 GKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTA 294 (342)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCH
Confidence 75332100 00012467788899999999999999999
Q ss_pred CCCCCCC
Q 012042 343 DEGSDDG 349 (472)
Q Consensus 343 ~e~~~~~ 349 (472)
++...-.
T Consensus 295 ~ell~h~ 301 (342)
T cd07854 295 EEALMHP 301 (342)
T ss_pred HHHhCCC
Confidence 8876644
No 340
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=6.5e-24 Score=221.06 Aligned_cols=232 Identities=16% Similarity=0.192 Sum_probs=161.2
Q ss_pred HhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 87 VNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 87 ~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
..+|-.|++.+.||.||.+.||++...+.+.||+|.......... .-.....|+..|.+|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~q--------------------tl~gy~nEI~lL~KL 416 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQ--------------------TLDGYRNEIALLNKL 416 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHH--------------------HHHHHHHHHHHHHHh
Confidence 345677899999999999999999887777888884432111111 111345799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
+.+ ..+-.++++ +..|+|||| ...+|.+++... .+ ..++.|++.++.++|++||||.||||.|+|+-
T Consensus 417 kg~-~~IIqL~DYEv~d~~lYmvmE~-Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV 494 (677)
T KOG0596|consen 417 KGH-DKIIQLYDYEVTDGYLYMVMEC-GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV 494 (677)
T ss_pred cCC-ceEEEEeeeeccCceEEEEeec-ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE
Confidence 875 455666665 678999997 447888876432 22 35899999999999999999999999999997
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----------cCCCCcchheeccCchhhhhh
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----------DGDDGSDIDTDEGSRLSFASI 304 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----------~~~~~~~sDiySlG~~~f~~~ 304 (472)
.|.+||||||.|..+. +....++ +|.. +++.-+++|+-.. .-.++.+|||||+|+.+|.++
T Consensus 495 -kG~LKLIDFGIA~aI~-~DTTsI~-kdsQ-----vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 495 -KGRLKLIDFGIANAIQ-PDTTSIV-KDSQ-----VGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV 566 (677)
T ss_pred -eeeEEeeeechhcccC-cccccee-eccc-----cCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence 5899999999997542 1111111 2211 1221222333221 123778999999999999998
Q ss_pred hccCCcchh---------------hhhccCCCH--HHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 305 SKTAGFLDK---------------ELAASGFTR--KDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 305 t~~~~~l~~---------------~~~~~~~s~--~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
-++.++-+. .+.-...+. ++.+++..||..||.+||+..|.+.-
T Consensus 567 YgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 567 YGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 876543211 111111222 26789999999999999999998763
No 341
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.90 E-value=2.8e-23 Score=211.54 Aligned_cols=222 Identities=13% Similarity=0.161 Sum_probs=155.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||.+........ ....+.+|+.++.++.|+++
T Consensus 17 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~ni 76 (342)
T cd07879 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEI--------------------FAKRAYRELTLLKHMQHENV 76 (342)
T ss_pred eEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccccc--------------------chhHHHHHHHHHHhcCCCCc
Confidence 56679999999999999998 4799999998753211000 01124579999999988763
Q ss_pred Ccceeee----------cCCceeEEeecCCCChhhhhccCCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVD----------CNRHCVIMSLVQGYPLVQVNQLQNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~----------~~~~~LVMEyi~G~~L~~l~~~~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
...++ ....++||||+.+ .|........+ ..++.+++.+|.+||+.||+||||||.|||++.+
T Consensus 77 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~ 153 (342)
T cd07879 77 --IGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED 153 (342)
T ss_pred --cchhheecccccCCCCceEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 22222 1345899999975 56554332222 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchhh--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDKE-- 314 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~~-- 314 (472)
+.++|+|||.+...... ...+.......+|+.... ..++.++|+||||+++++++++...+....
T Consensus 154 ~~~kL~dfg~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~ 221 (342)
T cd07879 154 CELKILDFGLARHADAE------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 221 (342)
T ss_pred CCEEEeeCCCCcCCCCC------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999998643211 011222222334443333 458889999999999999998753221000
Q ss_pred ------------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 315 ------------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 315 ------------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
..-..++.++.++|.+|+..+|++||+.++.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~ 298 (342)
T cd07879 222 DQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP 298 (342)
T ss_pred HHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 00124667788999999999999999998877643
No 342
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.90 E-value=2.4e-23 Score=211.06 Aligned_cols=234 Identities=17% Similarity=0.217 Sum_probs=168.8
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
++.+.||.|.-|.||+|... ++..+|+|++... +... +. .-.+++.|-.||..+.|+-
T Consensus 80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~--~l~~----rk-------------Kl~Ra~tE~eIL~~lDHPF-- 138 (459)
T KOG0610|consen 80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKE--SLAS----RK-------------KLKRAQTEREILSLLDHPF-- 138 (459)
T ss_pred HHHHHcCCCCceeEEEEEecCCCceEEEEEecHH--HHhh----hh-------------HHHHHHHHHHHHHhcCCCc--
Confidence 45688999999999999984 5789999998522 1110 00 0125667888999999874
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccCC----h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN----P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~----~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
.|.++.. ...|||||||+|++|..+++.+. + .-++.+++-||+|||-.|||.|||||+||||.++|+|
T Consensus 139 lPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHI 218 (459)
T KOG0610|consen 139 LPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHI 218 (459)
T ss_pred cchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcE
Confidence 4666653 56899999999999998875431 2 2267899999999999999999999999999999999
Q ss_pred EEEeCCCceecC-cccch------------------------hhh---cc----cc---------------chhhhhccc
Q 012042 241 TMIDFPQMVSVS-HQNAQ------------------------MYF---DR----DV---------------ECIFKFFRK 273 (472)
Q Consensus 241 kIIDFG~A~~~~-~p~a~------------------------~~l---~r----D~---------------~~i~~~f~~ 273 (472)
-|+||.++.... .|... ..+ .+ +. .....|+++
T Consensus 219 MLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGT 298 (459)
T KOG0610|consen 219 MLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGT 298 (459)
T ss_pred EeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccc
Confidence 999999876442 11100 000 00 00 011135566
Q ss_pred cccccccccccCCCCcchheeccCchhhhhhhccCCcc------------hhhhh---ccCCCHHHHHHHHHHHhcCccc
Q 012042 274 RFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL------------DKELA---ASGFTRKDQDVIQKFIGGSIEE 338 (472)
Q Consensus 274 ~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l------------~~~~~---~~~~s~~~~~~l~k~l~~~p~~ 338 (472)
.-+++|++..+.-=+...|.|+||+-+||++-+..++- .+.+. ...++...+++|.++|.++|.+
T Consensus 299 hEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 299 HEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred cccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 66677887777788999999999999999988754321 11111 1356688899999999999999
Q ss_pred CCCCCCCCCC
Q 012042 339 SGSDDEGSDD 348 (472)
Q Consensus 339 R~s~~e~~~~ 348 (472)
|-...-+..|
T Consensus 379 Rlg~~rGA~e 388 (459)
T KOG0610|consen 379 RLGSKRGAAE 388 (459)
T ss_pred hhccccchHH
Confidence 9886665543
No 343
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.90 E-value=2.2e-23 Score=206.96 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=154.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|.+ .+++.||||.+......-. ....+.+|+.+|.++.|+++
T Consensus 10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 69 (311)
T cd07866 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG--------------------FPITALREIKILKKLKHPNV 69 (311)
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC--------------------cchhHHHHHHHHHhcCCCCc
Confidence 66789999999999999998 4689999998764321100 00123479999999988764
Q ss_pred Ccceeeec------------CCceeEEeecCCCChhhhhcc---CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 172 PVPNAVDC------------NRHCVIMSLVQGYPLVQVNQL---QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 172 ~vP~~i~~------------~~~~LVMEyi~G~~L~~l~~~---~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
..+++. ...++||||+.+. +...+.. .. ...++.+++.+|.+||..||+||||||.||
T Consensus 70 --~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~ni 146 (311)
T cd07866 70 --VPLIDMAVERPDKSKRKRGSVYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANI 146 (311)
T ss_pred --cchhhheecccccccccCceEEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 222221 2358999999864 4333221 11 224788999999999999999999999999
Q ss_pred EEcCCCcEEEEeCCCceecCcccchhhhcc--ccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCC
Q 012042 233 MIDDDEKVTMIDFPQMVSVSHQNAQMYFDR--DVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAG 309 (472)
Q Consensus 233 Ll~~~g~vkIIDFG~A~~~~~p~a~~~l~r--D~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~ 309 (472)
|++.++.++|+|||.+.....+........ .........+.....+|+... ...++.++|+||||+++++++++...
T Consensus 147 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~ 226 (311)
T cd07866 147 LIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPI 226 (311)
T ss_pred EECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCC
Confidence 999999999999999875543211100000 000001112222233444332 34578999999999999999987532
Q ss_pred cchh-------h------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 310 FLDK-------E------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 310 ~l~~-------~------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.... . ..-..+...+.++|.+|+..+|++|||..+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 227 LQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred CCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 1100 0 00023456778999999999999999987654
Q ss_pred C
Q 012042 347 D 347 (472)
Q Consensus 347 ~ 347 (472)
.
T Consensus 307 ~ 307 (311)
T cd07866 307 E 307 (311)
T ss_pred c
Confidence 3
No 344
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.90 E-value=3.3e-23 Score=203.51 Aligned_cols=205 Identities=14% Similarity=0.177 Sum_probs=144.7
Q ss_pred ecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCCccee
Q 012042 99 LGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFPVPNA 176 (472)
Q Consensus 99 IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~vP~~ 176 (472)
||.|+||.||++.. .++..+|+|++.... +.. .|......+ .|++ ++++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~-------------------------~e~~~~~~~~~h~~--iv~~ 74 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKN--FNA-------------------------IEPMVHQLMKDNPN--FIKL 74 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhh--cch-------------------------hhHHHHHHhhcCCC--EEEE
Confidence 69999999999998 578999999875321 100 122222212 2332 3444
Q ss_pred eec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC-cEEEEeC
Q 012042 177 VDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE-KVTMIDF 245 (472)
Q Consensus 177 i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g-~vkIIDF 245 (472)
+.. +..|+||||++|++|..++... .+ ..++.||+.+|.+||+.|++||||+|.||+++.++ .++|+||
T Consensus 75 ~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 75 YYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred EEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 332 5689999999999998876432 11 24788999999999999999999999999999888 8999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc-------hhh----
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL-------DKE---- 314 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l-------~~~---- 314 (472)
|.+........ +.+....++|+......++.++|+||||+++|+++++..+.- ...
T Consensus 155 g~~~~~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 221 (267)
T PHA03390 155 GLCKIIGTPSC-------------YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK 221 (267)
T ss_pred ccceecCCCcc-------------CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH
Confidence 99875532210 111222234554456678899999999999999999754321 000
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCCC-CCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGSD-DEG 345 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s~-~e~ 345 (472)
.....++..+.++|.+|++.+|.+|+++ ++-
T Consensus 222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 259 (267)
T PHA03390 222 RQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEI 259 (267)
T ss_pred hhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHH
Confidence 0123578899999999999999999975 443
No 345
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.90 E-value=4.1e-23 Score=198.37 Aligned_cols=215 Identities=15% Similarity=0.161 Sum_probs=154.8
Q ss_pred ecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||.|+||.||++... +++.||+|+++....... .....+..|+.++.++.|+++ +.++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~h~~i--~~~~ 59 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR-------------------KEVEHTLTERNILSRINHPFI--VKLH 59 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch-------------------HHHHHHHHHHHHHHHcCCCcH--HHHH
Confidence 699999999999984 689999998864321100 011235578899999987653 3332
Q ss_pred e----cCCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 178 D----CNRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 178 ~----~~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
. ....+++|||++|++|.+.+... . ...++.+++.++.+||+.|++|+||+|.||+++.++.++|+|||.
T Consensus 60 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~ 139 (250)
T cd05123 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGL 139 (250)
T ss_pred HHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCc
Confidence 2 25679999999999998875432 1 124788999999999999999999999999999999999999999
Q ss_pred ceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcc--h-----hhh----
Q 012042 248 MVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--D-----KEL---- 315 (472)
Q Consensus 248 A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~-----~~~---- 315 (472)
+....... .....+. ...+| +|+.......+.++|+||||+++++.+++..+.. + ..+
T Consensus 140 ~~~~~~~~---------~~~~~~~-~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~ 209 (250)
T cd05123 140 AKELSSEG---------SRTNTFC-GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP 209 (250)
T ss_pred ceecccCC---------CcccCCc-CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC
Confidence 87553221 0011112 23334 4444455667889999999999999998754321 1 001
Q ss_pred --hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 316 --AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 316 --~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
....++..+.++|.+|+..+|++||++.+
T Consensus 210 ~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 210 LRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 13445788899999999999999999953
No 346
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.90 E-value=1.7e-23 Score=213.26 Aligned_cols=223 Identities=13% Similarity=0.124 Sum_probs=156.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+...||+|++|.||+|.+. +++.||||++......... ...+.+|+.+++++.|+++
T Consensus 17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i 76 (343)
T cd07851 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIH--------------------AKRTYRELRLLKHMDHENV 76 (343)
T ss_pred eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhH--------------------HHHHHHHHHHHHhccCCCH
Confidence 567799999999999999984 6899999987532111110 0124468999999987653
Q ss_pred Cc-ceeee-------cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PV-PNAVD-------CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~v-P~~i~-------~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
.. ...+. ....++||||+ |.+|.+++... ....++.+++.+|.+||+.||+||||+|.||+++.++
T Consensus 77 v~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07851 77 IGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155 (343)
T ss_pred HHHHHHhhccccccccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 11 11111 12379999998 55887765332 1234788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+...... ...+.......+|+... ...++.++|+||||+++++++++.......
T Consensus 156 ~~kL~dfg~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~ 223 (343)
T cd07851 156 ELKILDFGLARHTDDE------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID 223 (343)
T ss_pred CEEEcccccccccccc------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 9999999998754322 11112222222343322 236788999999999999999975422100
Q ss_pred ---h-------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---E-------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---~-------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. ....+++.++.++|.+|+..+|++||+..+...-
T Consensus 224 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 224 QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0 0012468888999999999999999999987653
No 347
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.90 E-value=4e-23 Score=202.13 Aligned_cols=223 Identities=13% Similarity=0.180 Sum_probs=154.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|++|.||+|... +|+.+|||.++....... ....+.+|+.++.++.|+++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~i 60 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEG--------------------FPITAIREIKLLQKLRHPNI 60 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccccccc--------------------chHHHHHHHHHHHhccCCCe
Confidence 456789999999999999985 589999999874420000 00124469999999987653
Q ss_pred Ccceeee----c--CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVD----C--NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~----~--~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
...++ . +..++||||+++ +|..++... . ...++.+|+.+|.+||..|++|+||+|.||++++++
T Consensus 61 --~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~ 137 (287)
T cd07840 61 --VRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG 137 (287)
T ss_pred --eeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC
Confidence 22222 2 468999999986 666654321 1 124788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||.+.....+..... .. ... ..+..+|+... ...++.++|+||||+++++++++.......
T Consensus 138 ~~~l~d~g~~~~~~~~~~~~~-----~~--~~~-~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~ 209 (287)
T cd07840 138 VLKLADFGLARPYTKRNSADY-----TN--RVI-TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE 209 (287)
T ss_pred CEEEccccceeeccCCCcccc-----cc--ccc-ccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 999999999986654322100 00 011 11223444332 345789999999999999999875321000
Q ss_pred ---hh------------------------------------hccC-CCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ---EL------------------------------------AASG-FTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ---~~------------------------------------~~~~-~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ .... ++..+.++|.+|+..+|++||++++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 282 (287)
T cd07840 210 QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQAL 282 (287)
T ss_pred HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 00 0011 277788999999999999999987654
No 348
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.90 E-value=2.5e-23 Score=206.24 Aligned_cols=223 Identities=13% Similarity=0.176 Sum_probs=152.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+. +|+.||||+++....... ......+|+.++.++.|+++
T Consensus 9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~--------------------~~~~~~~e~~~~~~l~h~~i 68 (302)
T cd07864 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG--------------------FPITAIREIKILRQLNHRNI 68 (302)
T ss_pred hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccC--------------------chHHHHHHHHHHHhCCCCCe
Confidence 456789999999999999994 689999999864321100 01134578999999987653
Q ss_pred Ccceeeec--------------CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 172 PVPNAVDC--------------NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 172 ~vP~~i~~--------------~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
..+++. +..++||||++| .+...+... ....++.+|+.+|.|||+.||+||||+|.
T Consensus 69 --~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~ 145 (302)
T cd07864 69 --VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCS 145 (302)
T ss_pred --eeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 222211 257899999997 444433211 12347889999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCC
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAG 309 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~ 309 (472)
||+++.++.++|+|||.+..........+ . .........+|+.+. ....+.++|+||||+++++++++...
T Consensus 146 nili~~~~~~kl~dfg~~~~~~~~~~~~~-----~---~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~ 217 (302)
T cd07864 146 NILLNNKGQIKLADFGLARLYNSEESRPY-----T---NKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPI 217 (302)
T ss_pred HEEECCCCcEEeCcccccccccCCccccc-----c---cceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999875432111000 0 001111222344332 24568899999999999999886532
Q ss_pred cchh-------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 310 FLDK-------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 310 ~l~~-------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.... ......++..+.++|.+|+..+|.+||+.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 297 (302)
T cd07864 218 FQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297 (302)
T ss_pred CCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 2100 001124678889999999999999999986543
No 349
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.90 E-value=1.6e-23 Score=209.33 Aligned_cols=231 Identities=13% Similarity=0.082 Sum_probs=152.6
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
.+++.+|.|+++.||++.. +|+.||||+++........ ...+.+|+.+|.++.|+++..
T Consensus 5 ~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~--------------------~~~~~~Ei~~l~~l~h~~i~~ 63 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKED--------------------LKLLQQEIITSRQLQHPNILP 63 (314)
T ss_pred hhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhH--------------------HHHHHHHHHHHHhcCCcchhh
Confidence 3455555666655555543 7999999998643211111 124568999999998865322
Q ss_pred ce-e-eecCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 174 PN-A-VDCNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 174 P~-~-i~~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
.. . ...+..+++|||+++++|..++... .+ ..++.+++.+|.|||++||+||||||.||+++.++.++|+
T Consensus 64 ~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~ 143 (314)
T cd08216 64 YVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS 143 (314)
T ss_pred hhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEe
Confidence 11 1 1225679999999999998876421 11 2377899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccc-ccccccc--CCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|||.+.......... +..............| +|+.+.. ..++.++|+||||+.+++++++..+.-+.
T Consensus 144 d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~ 220 (314)
T cd08216 144 GLRYSVSMIKHGKRQ---RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL 220 (314)
T ss_pred cCccceeeccccccc---cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999987553211100 1111111112222233 4443322 35788999999999999998864432100
Q ss_pred -hh---------------------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -EL---------------------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -~~---------------------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ ....++.++.++|.+|+..+|++|||+++..+-
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 221 EKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred HHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00 011234567789999999999999999877663
No 350
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.90 E-value=3.7e-23 Score=225.37 Aligned_cols=226 Identities=11% Similarity=0.085 Sum_probs=139.7
Q ss_pred eeeecceecccCceeEEEEEe-CC----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHH-----HH
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-ED----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKE-----FA 161 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE-----~~ 161 (472)
-|.+.+.||+|+||.||+|.+ .+ +..||||...... ... .|... ...+. ..
T Consensus 133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e--------------~~~~e---~l~~~~~~~~~~ 193 (566)
T PLN03225 133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVE--------------IWMNE---RVRRACPNSCAD 193 (566)
T ss_pred CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhH--------------HHHHH---HHHhhchhhHHH
Confidence 467889999999999999998 45 7899999764211 000 00000 00000 00
Q ss_pred HHHHhhhCCCCccee-eecCCceeEEeecCCCChhhhhccCC--------------------------hHHHHHHHHHHH
Q 012042 162 FMKALEDHGFPVPNA-VDCNRHCVIMSLVQGYPLVQVNQLQN--------------------------PDSVFETIIGLV 214 (472)
Q Consensus 162 ~L~~L~~~gi~vP~~-i~~~~~~LVMEyi~G~~L~~l~~~~~--------------------------~~~i~~qIl~aL 214 (472)
.+..+. .+.. ......+|||||+++++|.+++.... ...++.||+.+|
T Consensus 194 ~~~~~~-----~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL 268 (566)
T PLN03225 194 FVYGFL-----EPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFAL 268 (566)
T ss_pred HHHhhh-----cccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHH
Confidence 111111 1111 22356789999999999988753211 114788999999
Q ss_pred HHHHHCCceeccCCCCcEEEcC-CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc----------
Q 012042 215 VRLAEHGLIHCDFNEFNIMIDD-DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---------- 283 (472)
Q Consensus 215 ~~LH~~GIIHrDLKP~NILl~~-~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---------- 283 (472)
.|||++||+||||||+|||++. ++.++|+|||+|..+..... +. ...+.....+++|+.+.
T Consensus 269 ~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~--~~------~~~~~~t~~Y~APE~~~~~~~~~~~~~ 340 (566)
T PLN03225 269 DGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN--YI------PKEFLLDPRYAAPEQYIMSTQTPSAPS 340 (566)
T ss_pred HHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccc--cC------CcccccCCCccChHHhhccCCCCCCcc
Confidence 9999999999999999999985 57899999999975432110 00 01111111122222111
Q ss_pred ------------cCCCCcchheeccCchhhhhhhccCCcc------------------hh-hhhccCCCHH---------
Q 012042 284 ------------DGDDGSDIDTDEGSRLSFASISKTAGFL------------------DK-ELAASGFTRK--------- 323 (472)
Q Consensus 284 ------------~~~~~~~sDiySlG~~~f~~~t~~~~~l------------------~~-~~~~~~~s~~--------- 323 (472)
...++.++||||||++++++++.....- .+ ......++.+
T Consensus 341 ~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 420 (566)
T PLN03225 341 APVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLD 420 (566)
T ss_pred ccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhcc
Confidence 2235567899999999999886421100 00 0001112222
Q ss_pred -----HHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 324 -----DQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 324 -----~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
..++|.+||..+|++|||+.+-..--
T Consensus 421 ~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hp 451 (566)
T PLN03225 421 LDGGAGWELLKSMMRFKGRQRISAKAALAHP 451 (566)
T ss_pred ccchHHHHHHHHHccCCcccCCCHHHHhCCc
Confidence 22799999999999999999988743
No 351
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.90 E-value=7.5e-24 Score=205.01 Aligned_cols=225 Identities=15% Similarity=0.213 Sum_probs=168.9
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
-.+.||.|..+.|-+|.. ++|..+|+|++....+.-. ... .+..+++..+|+.+|+++..+
T Consensus 21 pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~-------------~e~-~~~~~EaT~~Ev~ILRqv~GH---- 82 (411)
T KOG0599|consen 21 PKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTES-------------GET-PYEMREATRQEISILRQVMGH---- 82 (411)
T ss_pred hHHHhcccchhhhhhhhhcccccceeEEEEEecccccC-------------Ccc-HHHHHHHHHHHHHHHHHhcCC----
Confidence 357899999999999988 5789999998864322111 011 233456778999999999764
Q ss_pred ceeeec-------CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 174 PNAVDC-------NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 174 P~~i~~-------~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
|.++.. .-.++|+|.++.+.|.+++... ....+++|+++++.|||..+||||||||+|||++++.++
T Consensus 83 P~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i 162 (411)
T KOG0599|consen 83 PYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNI 162 (411)
T ss_pred CcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccce
Confidence 887764 3467899999999999986432 234699999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc------ccCCCCcchheeccCchhhhhhhccCCcchhh
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET------TDGDDGSDIDTDEGSRLSFASISKTAGFLDKE 314 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~------~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~~ 314 (472)
+|.|||+|+.+..... +...++++.+.+|+.. ...-|+...|+|++|+.+|.++.+.+++....
T Consensus 163 ~isDFGFa~~l~~Gek----------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk 232 (411)
T KOG0599|consen 163 KISDFGFACQLEPGEK----------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK 232 (411)
T ss_pred EEeccceeeccCCchh----------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH
Confidence 9999999987643211 2222344333344332 23457788999999999999999987654321
Q ss_pred -------h---------hc-cCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 -------L---------AA-SGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 -------~---------~~-~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+ +. ..+|...+++|-++|+-+|.+|.|+.|-+.
T Consensus 233 QmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 233 QMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1 11 246777889999999999999999988765
No 352
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.90 E-value=2.2e-23 Score=210.72 Aligned_cols=227 Identities=12% Similarity=0.112 Sum_probs=154.3
Q ss_pred ceeccc--CceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 97 RQLGVG--KESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 97 ~~IG~G--~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
..||.| +||.||+|.+ .+|+.||||++......... ...+.+|+.++..+.|+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~e~~~~~~l~h~ni-- 61 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEH--------------------LKALQNEVVLSHFFRHPNI-- 61 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHH--------------------HHHHHHHHHHHHhCCCCCc--
Confidence 345666 9999999998 57999999998643221111 1245678888888888764
Q ss_pred ceeeec----CCceeEEeecCCCChhhhhccC----ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 174 PNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 174 P~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
...++. +..++||||+.+++|..++... .+. .++.|++.+|.|||+.||+||||||.|||++.++.++
T Consensus 62 v~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~ 141 (328)
T cd08226 62 MTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVS 141 (328)
T ss_pred ceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEE
Confidence 333332 5679999999999998875421 122 4788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccch-hhhccccchhhhhccccc-ccccccccc--CCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 242 MIDFPQMVSVSHQNAQ-MYFDRDVECIFKFFRKRF-HLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~-~~l~rD~~~i~~~f~~~y-~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
++||+.+......... ... .....+..... .++|+.... ..++.++|+||||+++++++++..+....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~ 217 (328)
T cd08226 142 LSGLSHLYSLVRNGQKAKVV----YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ 217 (328)
T ss_pred EechHHHhhhhccCcccccc----ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH
Confidence 9999865432211100 000 00011111112 234444332 34789999999999999998865332100
Q ss_pred ---hh-----------------------------------------------------hccCCCHHHHHHHHHHHhcCcc
Q 012042 314 ---EL-----------------------------------------------------AASGFTRKDQDVIQKFIGGSIE 337 (472)
Q Consensus 314 ---~~-----------------------------------------------------~~~~~s~~~~~~l~k~l~~~p~ 337 (472)
.. ....++..+.++|.+|+..+|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 297 (328)
T cd08226 218 MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPE 297 (328)
T ss_pred HHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcc
Confidence 00 0123566788999999999999
Q ss_pred cCCCCCCCCCCC
Q 012042 338 ESGSDDEGSDDG 349 (472)
Q Consensus 338 ~R~s~~e~~~~~ 349 (472)
+||++++-....
T Consensus 298 ~Rpta~e~l~~~ 309 (328)
T cd08226 298 KRPSASSLLSHA 309 (328)
T ss_pred cCCCHHHHhhCH
Confidence 999998876543
No 353
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.90 E-value=2.5e-23 Score=203.43 Aligned_cols=221 Identities=15% Similarity=0.149 Sum_probs=155.8
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
++...||+|++|.||+|... +++.||+|++......... ......|+.++.++.|+++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~--------------------~~~~~~e~~~l~~~~~~~i- 60 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGI--------------------PSTALREISLLKELKHPNI- 60 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccc--------------------cHHHHHHHHHHHhcCCCCH-
Confidence 45678999999999999984 6999999998643210000 0123468889999887653
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++ ....++||||+++ +|..++... . ...++.+++.+|.+||..||+||||+|.||+++.++.++
T Consensus 61 -~~~~~~~~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~ 138 (282)
T cd07829 61 -VKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLK 138 (282)
T ss_pred -HHHHhhhhcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEE
Confidence 22222 2678999999985 787765322 1 124788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccC-CCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG-DDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~-~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||.+.....+.. .....+...+..+|+.+... .++.++|+||||+++++.+++.......
T Consensus 139 l~d~g~~~~~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 209 (282)
T cd07829 139 LADFGLARAFGIPLR---------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLF 209 (282)
T ss_pred EecCCcccccCCCcc---------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 999999875533211 01111222233455544333 7888999999999999998864321000
Q ss_pred -----------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -----------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -----------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.++|.+|+..+|++||++++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 210 KIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred HHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 001123567888999999999999999987643
No 354
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.90 E-value=7.9e-23 Score=200.37 Aligned_cols=221 Identities=16% Similarity=0.163 Sum_probs=151.5
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh---h
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE---D 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~---~ 168 (472)
|++.+.||.|+||.||+|.+. +++.||||.++.....-. ......+|+.++.++. |
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~h 60 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG--------------------IPLSTLREIALLKQLESFEH 60 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccch--------------------hhhhHHHHHHHHHHhhccCC
Confidence 456789999999999999985 589999999864321100 0012335777777774 4
Q ss_pred CCCCcceeeec----CC-----ceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 169 HGFPVPNAVDC----NR-----HCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 169 ~gi~vP~~i~~----~~-----~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
+++ +++++. .. .+++|||+++ .|..++... .+ ..++.+++.+|.+||+.|++|+||+|.|
T Consensus 61 ~~i--~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~n 137 (287)
T cd07838 61 PNI--VRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQN 137 (287)
T ss_pred CCc--ceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhh
Confidence 432 333332 23 7899999986 566544221 11 2478899999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
|+++.++.++|+|||.+......... ..........+|+......++.++|+||||+++++++++....-
T Consensus 138 ili~~~~~~~l~dfg~~~~~~~~~~~----------~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 138 ILVTSDGQVKIADFGLARIYSFEMAL----------TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred EEEccCCCEEEeccCcceeccCCccc----------ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 99999999999999998765432110 01111112234554456778899999999999999988643210
Q ss_pred hh--------hh--------------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 DK--------EL--------------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 ~~--------~~--------------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.. .. ....++..+.++|.+|+..+|.+||+.++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 208 GTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 00 00 0012345667899999999999999987644
No 355
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.90 E-value=5.1e-23 Score=206.27 Aligned_cols=224 Identities=13% Similarity=0.159 Sum_probs=156.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|...+.||.|+||.||+|.+ .++..||||.+......... ....+.+|+.++..+.|+++
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~-------------------~~~~~~~e~~~l~~l~h~~i 77 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-------------------KWQDIIKEVRFLQKLRHPNT 77 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChH-------------------HHHHHHHHHHHHHhCCCCCc
Confidence 44457899999999999998 46889999987632111100 01124579999999988653
Q ss_pred Ccce--eeecCCceeEEeecCCCChhhhhc-cC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPN--AVDCNRHCVIMSLVQGYPLVQVNQ-LQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~--~i~~~~~~LVMEyi~G~~L~~l~~-~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
.... .......++||||+.| ++...+. .. . ...++.+++.++.+||..|++||||+|.||+++.++.++|
T Consensus 78 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl 156 (308)
T cd06634 78 IQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156 (308)
T ss_pred ccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEE
Confidence 2211 1123668999999986 5544331 11 1 1246789999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|||.+....... .+.+.....+|+.. ....++.++|+||||+++++++++..+....
T Consensus 157 ~dfg~~~~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 223 (308)
T cd06634 157 GDFGSASIMAPAN-------------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223 (308)
T ss_pred CCcccceeecCcc-------------cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH
Confidence 9999986542110 11122222334332 1356788999999999999999876432110
Q ss_pred ---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 ---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
......++..+.++|.+|+..+|++||+.++.....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 011236888899999999999999999998776644
No 356
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.89 E-value=3e-23 Score=198.64 Aligned_cols=230 Identities=14% Similarity=0.079 Sum_probs=161.9
Q ss_pred CCceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 89 RGVFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 89 ~~~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
.+--|.|.+.||.|||+-||++.. .++..+|+|.+.... -+ ....+.+|+++-+++.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~--------------------~~e~~~rEid~~rkf~ 76 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QE--------------------DIEEALREIDNHRKFN 76 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hH--------------------HHHHHHHHHHHHHhhC
Confidence 344588999999999999999987 678899999765321 11 1235678999999998
Q ss_pred hCCCCcceeeec---------CCceeEEeecCCCChhhhhccC------Ch----HHHHHHHHHHHHHHHHCC--ceecc
Q 012042 168 DHGFPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ------NP----DSVFETIIGLVVRLAEHG--LIHCD 226 (472)
Q Consensus 168 ~~gi~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~------~~----~~i~~qIl~aL~~LH~~G--IIHrD 226 (472)
++++ -+.++. ..+||++.|...++|.+.++.. .+ ..++.+|+++|.+||+.. +.|||
T Consensus 77 s~~v--l~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~D 154 (302)
T KOG2345|consen 77 SPNV--LRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRD 154 (302)
T ss_pred Ccch--HHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccC
Confidence 7432 222221 3489999999988887764321 12 248899999999999998 99999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCc-----ccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCc
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSH-----QNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSR 298 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~-----p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~ 298 (472)
|||.|||+.+.+.++|+|||++....- ..+..+- |.. ..-+.-.|. +|+-| ....++.++||||||+
T Consensus 155 iKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQ--e~a--~e~Ct~pyR-APELf~vk~~~ti~ertDIWSLGC 229 (302)
T KOG2345|consen 155 IKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQ--EWA--EERCTIPYR-APELFNVKSHCTITERTDIWSLGC 229 (302)
T ss_pred CCcceeEecCCCceEEEeccCccccceEeechHHHHHHH--HHH--HHhCCCccc-CchheecccCcccccccchhhhhH
Confidence 999999999999999999999875431 1111110 111 111222232 23333 4678999999999999
Q ss_pred hhhhhhhccCCc---------c-----h--hhh-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 299 LSFASISKTAGF---------L-----D--KEL-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 299 ~~f~~~t~~~~~---------l-----~--~~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++|.++-+..++ + . ... ..+.||..+.++|..||+.+|.+||+..+...
T Consensus 230 tLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 230 TLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred HHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 998877653221 0 0 001 13459999999999999999999999887644
No 357
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.89 E-value=4.7e-23 Score=208.50 Aligned_cols=245 Identities=15% Similarity=0.129 Sum_probs=158.9
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.+.+.||.|+||.||+|.+. +++.||||+++.....- ..+..+.++... .....+.+|+.+|.++.|+++
T Consensus 12 ~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~i- 82 (335)
T PTZ00024 12 QKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISN-DVTKDRQLVGMC-------GIHFTTLRELKIMNEIKHENI- 82 (335)
T ss_pred hhhhcccCCCceeEEEEEECCCCCeEEEEEeecccccc-ccccchhhhccc-------ccchhHHHHHHHHHhCCCcce-
Confidence 34678999999999999984 69999999886432110 000000011000 001134579999999988653
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.+++ .+..++||||++| +|..++... ....++.|++.+|.+||+.||+||||+|.||+++.++.++|
T Consensus 83 -v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 83 -MGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred -eeeeEEEecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEE
Confidence 33333 2668999999986 666654321 12348899999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccc-----cchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 243 IDFPQMVSVSHQNAQMYFDRD-----VECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD-----~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
+|||.+.....+........+ ...........+..+|+...+ ..++.++|+||||+++++++++.......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999998765422110000000 000111111222234443322 45789999999999999999865321100
Q ss_pred h--------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 E--------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ~--------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
. .....++.++.++|.+|++.+|++||+.++...-.
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 0 00123467788999999999999999998887644
No 358
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1.8e-23 Score=215.87 Aligned_cols=225 Identities=14% Similarity=0.121 Sum_probs=168.4
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
+|.+.+.||+|-|+.|-+|++ -+|..||||++.... ... .+...+.+|++.|+-.+|++
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTK--lD~------------------~st~hlfqEVRCMKLVQHpN 78 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK--LDT------------------LSTGHLFQEVRCMKLVQHPN 78 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccc--cch------------------hhhhHHHHHHHHHHHhcCcC
Confidence 467788999999999999998 689999999986322 111 12223557999999999865
Q ss_pred C-Ccceeee-cCCceeEEeecCCCChhhhhcc-------CChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-CCCcE
Q 012042 171 F-PVPNAVD-CNRHCVIMSLVQGYPLVQVNQL-------QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDEKV 240 (472)
Q Consensus 171 i-~vP~~i~-~~~~~LVMEyi~G~~L~~l~~~-------~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-~~g~v 240 (472)
| ....+++ ....|||+|+=+|++|.+++-. ..+..+|.||+.+|.|+|+..+|||||||+|+++- .-|-|
T Consensus 79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlV 158 (864)
T KOG4717|consen 79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLV 158 (864)
T ss_pred eeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCce
Confidence 3 1222233 2678999999999999997521 14567999999999999999999999999999987 45889
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCC-CcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDD-GSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~-~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
||.|||++-.+... ..+.++++.--+.+|+++.+..| ....||||||+++|.++++..++.+.
T Consensus 159 KLTDFGFSNkf~PG----------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL 228 (864)
T KOG4717|consen 159 KLTDFGFSNKFQPG----------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL 228 (864)
T ss_pred EeeeccccccCCCc----------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh
Confidence 99999998644211 22344555433335666655444 56799999999999999987654321
Q ss_pred -hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.| .++.++++.+++|..||..+|.+|-|-+|-.
T Consensus 229 TmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 229 TMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred hhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 11 2477899999999999999999998776643
No 359
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.89 E-value=4.1e-23 Score=203.58 Aligned_cols=219 Identities=13% Similarity=0.069 Sum_probs=150.4
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCCCCc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHGFPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~gi~v 173 (472)
.+.||+|+||.||++.+ .+|+.||||.+...... .....+.+|+.++.++. |++ +
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---------------------~~~~~~~~e~~~l~~~~~~~~--i 65 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---------------------KEQKRLLMDLDVVMRSSDCPY--I 65 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---------------------HHHHHHHHHHHHHHHhcCCCC--E
Confidence 46799999999999998 46899999987532111 01123457888998886 543 3
Q ss_pred ceeee----cCCceeEEeecCCCChhhh---hc----cCCh----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCC
Q 012042 174 PNAVD----CNRHCVIMSLVQGYPLVQV---NQ----LQNP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 174 P~~i~----~~~~~LVMEyi~G~~L~~l---~~----~~~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~ 237 (472)
+..++ .+..+++|||+.+ ++..+ +. ...+ ..++.+++.+|.|||+ .||+||||||.|||++.+
T Consensus 66 v~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~ 144 (288)
T cd06616 66 VKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRN 144 (288)
T ss_pred eeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccC
Confidence 33333 2567899999875 33222 11 1112 3478899999999997 599999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC---CCCcchheeccCchhhhhhhccCCcch--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG---DDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~---~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
+.++|+|||.+.....+... ....+.....+|+.+... .++.++|+||||+++++.+++..+...
T Consensus 145 ~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 214 (288)
T cd06616 145 GNIKLCDFGISGQLVDSIAK----------TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN 214 (288)
T ss_pred CcEEEeecchhHHhccCCcc----------ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc
Confidence 99999999998654322110 001111122344433332 588999999999999999987543211
Q ss_pred ----h----------hhhc---cCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 313 ----K----------ELAA---SGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 313 ----~----------~~~~---~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. .+.. ..++.++.++|.+|+..+|++||+.++-..-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 215 SVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0011 1367888999999999999999999876553
No 360
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.8e-22 Score=208.33 Aligned_cols=161 Identities=19% Similarity=0.208 Sum_probs=124.5
Q ss_pred eeecceecccCceeEEEEEeC--CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE--DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~--~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+. +++.||||........+.. ...+..+.+|+.+|.+|.|++
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~-----------------~~~~~~~~~E~~iL~~L~h~~ 82 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSK-----------------PLARHLAAREIRALKTVRGIG 82 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccccc-----------------HHHHHHHHHHHHHHHhccCCC
Confidence 677899999999999999873 5788899976421100000 011234678999999999887
Q ss_pred CCcceeeecCCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccC-CCCcEEEcCCCcEEEEeCCCce
Q 012042 171 FPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDF-NEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 171 i~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDL-KP~NILl~~~g~vkIIDFG~A~ 249 (472)
+ +|.++..+..|||||||+|.+|.... ......++.+++.+|.+||++||+|||| ||.|||++.++.++|+|||+|.
T Consensus 83 i-v~~l~~~~~~~LVmE~~~G~~L~~~~-~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 83 V-VPQLLATGKDGLVRGWTEGVPLHLAR-PHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred C-CcEEEEcCCcEEEEEccCCCCHHHhC-ccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 5 56777788899999999999997432 1223568999999999999999999999 9999999988999999999999
Q ss_pred ecCcccchhhh--ccccchhhhhcc
Q 012042 250 SVSHQNAQMYF--DRDVECIFKFFR 272 (472)
Q Consensus 250 ~~~~p~a~~~l--~rD~~~i~~~f~ 272 (472)
......+...+ .+|+.++..+|.
T Consensus 161 ~~~~~~~~~~~~~~~d~~~~~~~~~ 185 (365)
T PRK09188 161 VFRRRGALYRIAAYEDLRHLLKHKR 185 (365)
T ss_pred ecccCcchhhhhhhhhhhhhhccCc
Confidence 87766555443 367777776663
No 361
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.89 E-value=1e-22 Score=202.39 Aligned_cols=222 Identities=15% Similarity=0.114 Sum_probs=151.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
+.+.+.||+|++|.||+|.+. +++.||||.++.....-. .....+|+.++.++. |++
T Consensus 17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~---------------------~~~~~~e~~~~~~~~~~~~ 75 (296)
T cd06618 17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE---------------------NKRILMDLDVVLKSHDCPY 75 (296)
T ss_pred heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHH---------------------HHHHHHHHHHHHhccCCCc
Confidence 456789999999999999995 589999999864321110 012335666666665 333
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCC
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g 238 (472)
++..++ ....|++|||+++ .+..+... ..+ ..++.+|+.+|.|||+ .||+||||+|.||+++.++
T Consensus 76 --i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~ 152 (296)
T cd06618 76 --IVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG 152 (296)
T ss_pred --hHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC
Confidence 233332 2568999999875 44443321 111 2488899999999997 6999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc----CCCCcchheeccCchhhhhhhccCCcch--
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD----GDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~----~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
.++|+|||.+.......... ...+.....+|+.+.. ..++.++|+||||+++++++++..+...
T Consensus 153 ~~kL~dfg~~~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 222 (296)
T cd06618 153 NVKLCDFGISGRLVDSKAKT----------RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK 222 (296)
T ss_pred CEEECccccchhccCCCccc----------CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch
Confidence 99999999987543221110 0011112234443322 3478899999999999999997643211
Q ss_pred --hh------------hh-ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 313 --KE------------LA-ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 313 --~~------------~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.. .. ...++.++..+|.+|+..+|++||+.++-...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 223 TEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred hHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00 12367889999999999999999998877653
No 362
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.89 E-value=8.5e-23 Score=215.43 Aligned_cols=224 Identities=16% Similarity=0.186 Sum_probs=164.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+...||+|.|+.|.+|++ .+|..||||++.... . .... +....+|+++|+.|.|++
T Consensus 57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~--l-n~~~-----------------~~k~~rev~imk~l~HPn 116 (596)
T KOG0586|consen 57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ--L-NPSK-----------------RQKLGREVDIMKSLNHPN 116 (596)
T ss_pred ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcc--c-ChHH-----------------HHHHHHHHHHHHhcCCcc
Confidence 578889999999999999999 579999999885321 1 1111 112458999999999866
Q ss_pred C-Ccceeee-cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 171 F-PVPNAVD-CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 171 i-~vP~~i~-~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+ .+-.++. ....|+||||+.|+.+.+++... ....+|.|+..+++|+|+++|||||||..|||++.+..++|
T Consensus 117 Ivkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikI 196 (596)
T KOG0586|consen 117 IVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKI 196 (596)
T ss_pred eeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceee
Confidence 4 2222332 26789999999999998875321 23458999999999999999999999999999999888999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
+|||++..+... .-+.+|++.+-+.+|+.. .....+..+|+||+|+++|.++.+.-++... .
T Consensus 197 aDfgfS~~~~~~----------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r 266 (596)
T KOG0586|consen 197 ADFGFSTFFDYG----------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR 266 (596)
T ss_pred eccccceeeccc----------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccch
Confidence 999999866411 112344554433444443 3467889999999999999988865332211 1
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .+--++.+..++|.+||-.+|.+|++-+.-
T Consensus 267 vl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqi 303 (596)
T KOG0586|consen 267 VLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQI 303 (596)
T ss_pred heeeeecccceeechhHHHHHHhhccCccccCCHHHh
Confidence 1 112357778899999999999999876544
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.89 E-value=4.7e-23 Score=199.97 Aligned_cols=222 Identities=13% Similarity=0.103 Sum_probs=153.5
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcc-hhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRT-SFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~-sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||+|+||.||++.+. .+..+++|+.+.... .+... ....+.+|+.++.++.|++
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~e~~~l~~l~h~~ 63 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPN------------------ETVQANQEAQLLSKLDHPA 63 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcc------------------hHHHHHHHHHHHHhCCCCc
Confidence 567789999999999999884 456677777653211 11100 0123456888999998765
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ ++++. ....++||||++|++|..++.. ..+ ..++.+++.++.+||+.|++|+||+|.||+++.
T Consensus 64 i--~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~ 141 (260)
T cd08222 64 I--VKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN 141 (260)
T ss_pred H--HHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec
Confidence 3 33332 2568899999999999876431 111 247889999999999999999999999999974
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcch---
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--- 312 (472)
+.++|+|||.+.....+.. ....+.....+ +|+......++.++|+||||+.+++++++......
T Consensus 142 -~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~ 210 (260)
T cd08222 142 -NLLKIGDFGVSRLLMGSCD----------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF 210 (260)
T ss_pred -CCEeecccCceeecCCCcc----------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 6799999999875432211 00111122223 44433456678899999999999999886532210
Q ss_pred ----hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 ----KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ----~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. .....++..+.++|.+|+..+|++||+..+-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 254 (260)
T cd08222 211 LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEI 254 (260)
T ss_pred HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00 1124577888999999999999999998764
No 364
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.1e-22 Score=194.19 Aligned_cols=189 Identities=16% Similarity=0.163 Sum_probs=142.3
Q ss_pred ecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHH-HhHHHHHHHHHHHHHhhhCCCCc
Q 012042 95 VGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLY-LSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~-~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
+...|++|+||.||.+.. .+.+++.+-+..... |.. .....+.+|+++|.+|.++ ..+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~-------------------~~~~~~~~l~~rE~~iL~~L~~~-~~v 64 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPW-------------------WLRGVAWWLARREALALRQLDGL-PRT 64 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchh-------------------hhhhHHHHHHHHHHHHHHhcCCC-CCC
Confidence 457899999999998765 577788775542211 111 1223577999999999764 457
Q ss_pred ceeeecCCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccC-CCCcEEEcCCCcEEEEeCCCceecC
Q 012042 174 PNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDF-NEFNIMIDDDEKVTMIDFPQMVSVS 252 (472)
Q Consensus 174 P~~i~~~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDL-KP~NILl~~~g~vkIIDFG~A~~~~ 252 (472)
|.+++++.++++|||+.|.+|.+.... ....++.+++.+|.++|++||+|||| ||+|||++.+|.++|||||+|...
T Consensus 65 P~ll~~~~~~lvmeyI~G~~L~~~~~~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~- 142 (218)
T PRK12274 65 PRLLHWDGRHLDRSYLAGAAMYQRPPR-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRG- 142 (218)
T ss_pred CEEEEEcCEEEEEeeecCccHHhhhhh-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceec-
Confidence 999999999999999999999765422 33468899999999999999999999 799999998999999999999854
Q ss_pred cccc--hhhh-ccccchhhhhccccccccc---ccc-ccCCCC-cchheeccCchhhhhhhcc
Q 012042 253 HQNA--QMYF-DRDVECIFKFFRKRFHLNF---QET-TDGDDG-SDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 253 ~p~a--~~~l-~rD~~~i~~~f~~~y~~~~---~~~-~~~~~~-~~sDiySlG~~~f~~~t~~ 307 (472)
++.+ ..+| .+|+.++.++|.+ |.-.+ .+- .-...+ ...+.++.|.+++.++|+.
T Consensus 143 ~~~~~~~r~L~~rDl~~llk~~~~-y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~ 204 (218)
T PRK12274 143 NPRARWMRLLAREDLRHLLKHKRM-YCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRR 204 (218)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHh-cCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhcc
Confidence 4444 2455 5999999999965 54322 211 112223 4567888999999999975
No 365
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4.5e-23 Score=218.58 Aligned_cols=218 Identities=12% Similarity=0.111 Sum_probs=160.5
Q ss_pred eecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 98 QLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
+||+|.+|+||.|++. +....|||-+......+.+ -+..|+.+..+|.|.+| .+-
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~Q----------------------PLhEEIaLH~~LrHkNI--VrY 637 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQ----------------------PLHEEIALHSTLRHKNI--VRY 637 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhc----------------------cHHHHHHHHHHHhhHhH--HHH
Confidence 7999999999999994 5667999976532222211 13468999999998753 222
Q ss_pred ee---c-CCceeEEeecCCCChhhhhccC-----ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEc-CCCcEEE
Q 012042 177 VD---C-NRHCVIMSLVQGYPLVQVNQLQ-----NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDEKVTM 242 (472)
Q Consensus 177 i~---~-~~~~LVMEyi~G~~L~~l~~~~-----~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-~~g~vkI 242 (472)
++ . +..-|.||-++|++|..++... +.+ -+..||+++|.|||+..|||||||-.|+||+ -.|.+||
T Consensus 638 LGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKI 717 (1226)
T KOG4279|consen 638 LGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKI 717 (1226)
T ss_pred hhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEe
Confidence 22 1 4456889999999999986422 111 2678999999999999999999999999998 4688999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhcccccc-cccccc--ccCCCCcchheeccCchhhhhhhccCCcchhhh----
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQET--TDGDDGSDIDTDEGSRLSFASISKTAGFLDKEL---- 315 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~--~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~~~---- 315 (472)
.|||.++.+.. +.-.+.-|.++.- ++|++. ...-|+...||||||++..++.|+++++.+...
T Consensus 718 SDFGTsKRLAg----------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA 787 (1226)
T KOG4279|consen 718 SDFGTSKRLAG----------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA 787 (1226)
T ss_pred cccccchhhcc----------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh
Confidence 99999986642 1112223444444 455544 336789999999999999999999876643211
Q ss_pred ------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 316 ------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 316 ------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+..+|.+-++.|.+|+.++|.+|||+...+++-
T Consensus 788 MFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 788 MFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred hhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 1234667778999999999999999999988754
No 366
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.1e-22 Score=214.26 Aligned_cols=224 Identities=17% Similarity=0.106 Sum_probs=158.0
Q ss_pred eecceecccCceeEEEEEeC--CC---CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 94 AVGRQLGVGKESDIFEVARE--DG---TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~--~g---~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
.++++||+|+||.||+|... ++ .+||||..+......+ .....+.+|+++|+.|.|
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~-------------------~~~~e~m~EArvMr~l~H 220 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTK-------------------EQIKEFMKEARVMRQLNH 220 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccH-------------------HHHHHHHHHHHHHHhCCC
Confidence 34589999999999999883 23 2389998764211111 112345689999999998
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
++ +.+++++ ..++||||+|+|++|.+++... .+ ..++.+.+.+|.|||+.++|||||-..|+|++.+
T Consensus 221 ~N--VVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 221 PN--VVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKK 298 (474)
T ss_pred CC--EEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCC
Confidence 65 3445543 5689999999999999986532 11 2378899999999999999999999999999988
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc------
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL------ 311 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l------ 311 (472)
+.+||+|||+++.-. .+......+ . -+--..+|+.+..+.++.++||||||+.++|..+....+.
T Consensus 299 ~~vKISDFGLs~~~~-----~~~~~~~~~--k--lPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~ 369 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGS-----QYVMKKFLK--K--LPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY 369 (474)
T ss_pred CeEEeCccccccCCc-----ceeeccccc--c--CcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH
Confidence 888999999987432 111111000 0 0112345777777899999999999999988777322121
Q ss_pred --hhhh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 --DKEL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 --~~~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...+ .+..-..+++.++.+|...+|++||+..+--.
T Consensus 370 ~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 370 EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 1111 12334556678899999999999999876544
No 367
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88 E-value=3.9e-23 Score=218.94 Aligned_cols=235 Identities=16% Similarity=0.157 Sum_probs=170.9
Q ss_pred cccccccHHHHHHHHhCC-----ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccch
Q 012042 73 LTYLGYDFLAIKTLVNRG-----VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSY 146 (472)
Q Consensus 73 lt~~g~d~~al~~l~~~~-----~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~ 146 (472)
..+.||.+.+..-+..-. --|.+...+|.|+||.|-.|.+ .+++..+||++.....
T Consensus 299 ~if~g~sfva~~il~~~~~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------------------ 360 (612)
T KOG0603|consen 299 TIFSGPSFVAPGVLEDAVTAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------------------ 360 (612)
T ss_pred chhcCCCccChHHhhccccCCcchhhccccccCCCCccceeeeeccccccchhheecccccc------------------
Confidence 455677777777766611 2366778899999999999998 5789999998853210
Q ss_pred hhHHHhHHHHHHHHHHHHHhhhCCCCcceeeec-------CCceeEEeecCCCChhhhh-ccC----ChHHHHHHHHHHH
Q 012042 147 NWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC-------NRHCVIMSLVQGYPLVQVN-QLQ----NPDSVFETIIGLV 214 (472)
Q Consensus 147 ~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~-------~~~~LVMEyi~G~~L~~l~-~~~----~~~~i~~qIl~aL 214 (472)
...+|..++.....+ |+++.. ...|+|||++.|+.+.+.+ ... ....++.+|+.++
T Consensus 361 --------~~~~e~~~~~~~~~h----~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av 428 (612)
T KOG0603|consen 361 --------DNQDEIPISLLVRDH----PNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAV 428 (612)
T ss_pred --------ccccccchhhhhcCC----CcceeecceecCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 123567666666543 555543 4579999999988765543 222 1234899999999
Q ss_pred HHHHHCCceeccCCCCcEEE-cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchhe
Q 012042 215 VRLAEHGLIHCDFNEFNIMI-DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDT 293 (472)
Q Consensus 215 ~~LH~~GIIHrDLKP~NILl-~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDi 293 (472)
.|||++|||||||||+|||+ +..|+++|+|||++.... ++ +...-+.. -+.+|+......++..||+
T Consensus 429 ~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~---------~~--~~tp~~t~-~y~APEvl~~~~yt~acD~ 496 (612)
T KOG0603|consen 429 DYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE---------RS--CDTPALTL-QYVAPEVLAIQEYTEACDW 496 (612)
T ss_pred HHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCc---------hh--hcccchhh-cccChhhhccCCCCcchhh
Confidence 99999999999999999999 588999999999998542 22 11111221 1234554456789999999
Q ss_pred eccCchhhhhhhccCCc----ch----hhhhc----cCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 294 DEGSRLSFASISKTAGF----LD----KELAA----SGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 294 ySlG~~~f~~~t~~~~~----l~----~~~~~----~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
||||+++|+++++.... -+ ..+.. ..+|..-+++|.+||+.+|.+|+++++.....
T Consensus 497 WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 497 WSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred HHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 99999999999986421 11 11221 35778888999999999999999999987765
No 368
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=3e-22 Score=194.13 Aligned_cols=175 Identities=10% Similarity=0.122 Sum_probs=129.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.++||.|+||.||++.. ++..+|||+++......... +. + ......+++|+..+.+|.++|++
T Consensus 33 y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~------~~-----~--f~~g~~~e~Ea~~l~rL~~~GI~ 98 (232)
T PRK10359 33 IKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERF------LK-----S--FVKGDYYENLIVQTDRVRSEGLA 98 (232)
T ss_pred eEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHH------HH-----h--hhhhHHHHHHHHHHHHHHHCCCC
Confidence 67789999999999999755 67789999997543211110 00 0 00122367899999999999998
Q ss_pred cceeeec----------CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+|..+.. +..+|+||||+|.+|.++.. .+...+.+++.+|..||+.|++|||+||+|||++++| ++|
T Consensus 99 ~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 99 SLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE--ISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred cceEeeeecccccccccCCeEEEEEEECCccHHHhhh--ccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEE
Confidence 8886522 35899999999999988743 3356788999999999999999999999999999888 999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
||||++....++.+...+ ...+. ++.+.|+||||+++.-...
T Consensus 176 iDfg~~~~~~e~~a~d~~---------vler~------------y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 176 IDLSGKRCTAQRKAKDRI---------DLERH------------YGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EECCCcccccchhhHHHH---------HHHhH------------hcccccccceeEeehHHHH
Confidence 999999866554443221 11222 2346799999999865544
No 369
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.88 E-value=2.3e-23 Score=203.88 Aligned_cols=213 Identities=15% Similarity=0.164 Sum_probs=157.2
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
.+||-|-.|.|..|.+ .+|+.+|+|+++-. ..|++|++..-....+ -++..
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---------------------------~KARrEVeLHw~~s~h-~~iV~ 119 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS---------------------------PKARREVELHWMASGH-PHIVS 119 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC---------------------------HHHHhHhhhhhhhcCC-CceEE
Confidence 7899999999999998 57999999987522 1245677765555432 12233
Q ss_pred eeec--------CCceeEEeecCCCChhhhhccC--------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC---
Q 012042 176 AVDC--------NRHCVIMSLVQGYPLVQVNQLQ--------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD--- 236 (472)
Q Consensus 176 ~i~~--------~~~~LVMEyi~G~~L~~l~~~~--------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~--- 236 (472)
+++. ....+|||+++|+.|...++.. ...+++.+|+.|+.|||+.+|.||||||+|+|...
T Consensus 120 IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~ 199 (400)
T KOG0604|consen 120 IIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSP 199 (400)
T ss_pred eehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCC
Confidence 3332 2356799999999998865432 23469999999999999999999999999999973
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
+..+||+|||+|+....++... +--| ++|+++|+....+.++..+|+||+|+.+|-++.+-+++...
T Consensus 200 na~lKLtDfGFAK~t~~~~~L~---------TPc~-TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ 269 (400)
T KOG0604|consen 200 NAPLKLTDFGFAKETQEPGDLM---------TPCF-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 269 (400)
T ss_pred CcceEecccccccccCCCcccc---------CCcc-cccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc
Confidence 4568999999999765443321 1113 46888888777788999999999999998888875443221
Q ss_pred --------hhh---------c-cCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --------ELA---------A-SGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --------~~~---------~-~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.|. . +.+|..-+++|.+||..+|.+|-+.++-.+
T Consensus 270 aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 270 AISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 111 1 235566679999999999999988776654
No 370
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=7.5e-23 Score=226.70 Aligned_cols=226 Identities=15% Similarity=0.179 Sum_probs=153.9
Q ss_pred HHHHHHHhCCceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHH
Q 012042 81 LAIKTLVNRGVFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKE 159 (472)
Q Consensus 81 ~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE 159 (472)
..+..|.-+---|.|.++||+|+||.|..++. .+++.||+|++.. +..+...... .+..|
T Consensus 65 ~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK-----------~eMlKr~~tA--------~F~EE 125 (1317)
T KOG0612|consen 65 KKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNK-----------WEMLKRAETA--------CFREE 125 (1317)
T ss_pred HHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhH-----------HHHhhchhHH--------HHHHH
Confidence 34555555555678889999999999999999 5799999998641 1111111110 11123
Q ss_pred HHHHHHhhhCCCCc---ceeeecCCceeEEeecCCCChhhhhccC--ChHH----HHHHHHHHHHHHHHCCceeccCCCC
Q 012042 160 FAFMKALEDHGFPV---PNAVDCNRHCVIMSLVQGYPLVQVNQLQ--NPDS----VFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 160 ~~~L~~L~~~gi~v---P~~i~~~~~~LVMEyi~G~~L~~l~~~~--~~~~----i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
-.+|...... ..+ ..+-+-+..|+||||++||+|..++... .|+. +...|+-||..+|+.|+|||||||.
T Consensus 126 RDimv~~ns~-Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPD 204 (1317)
T KOG0612|consen 126 RDIMVFGNSE-WIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPD 204 (1317)
T ss_pred hHHHHcCCcH-HHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcc
Confidence 3333322210 000 1122337789999999999998887543 4554 5568999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc----cc-CCCCcchheeccCchhhhhhh
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET----TD-GDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~----~~-~~~~~~sDiySlG~~~f~~~t 305 (472)
||||+..|+|+|+|||.+..+..... +.+ ...++++=+++|+++ .+ +.|+.-||.||+|+.+|+++.
T Consensus 205 NvLld~~GHikLADFGsClkm~~dG~-------V~s-~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMly 276 (1317)
T KOG0612|consen 205 NVLLDKSGHIKLADFGSCLKMDADGT-------VRS-SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLY 276 (1317)
T ss_pred eeEecccCcEeeccchhHHhcCCCCc-------EEe-ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHc
Confidence 99999999999999999976532111 111 123556666777765 23 789999999999999999998
Q ss_pred ccCCcchh----------------hhh-ccCCCHHHHHHHHHHHhc
Q 012042 306 KTAGFLDK----------------ELA-ASGFTRKDQDVIQKFIGG 334 (472)
Q Consensus 306 ~~~~~l~~----------------~~~-~~~~s~~~~~~l~k~l~~ 334 (472)
+..++..- ..+ ...+|.+.+++|+++|-.
T Consensus 277 G~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~ 322 (1317)
T KOG0612|consen 277 GETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCD 322 (1317)
T ss_pred CCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcC
Confidence 86654311 001 134778888999998864
No 371
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.88 E-value=3.3e-24 Score=209.61 Aligned_cols=220 Identities=15% Similarity=0.168 Sum_probs=168.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
++.|.++||+|++|.||+|.+ .+|..||||...... ... ..-+|+.+|.++.++.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQ-----------------------EIIKEISIMQQC~S~y 89 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQ-----------------------EIIKEISIMQQCKSKY 89 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHH-----------------------HHHHHHHHHHHcCCch
Confidence 456678999999999999998 579999999875432 221 2347999999998642
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
|.+-|+ ....|||||||..+++.+++... ....+++..+.+|+|||...=||||||..|||++.+|.
T Consensus 90 --VVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~ 167 (502)
T KOG0574|consen 90 --VVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI 167 (502)
T ss_pred --hhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch
Confidence 222222 15689999999999998876432 12347888899999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchhh-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDKE----- 314 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~~----- 314 (472)
.||+|||.|..++...|. | .+..+++|.++|+....--|+++.||||+|.+..++..++++.-+.+
T Consensus 168 AKLADFGVAGQLTDTMAK----R-----NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI 238 (502)
T KOG0574|consen 168 AKLADFGVAGQLTDTMAK----R-----NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI 238 (502)
T ss_pred hhhhhccccchhhhhHHh----h-----CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee
Confidence 999999999877654332 1 23467788899887666779999999999999999888765322211
Q ss_pred --h---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 --L---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 --~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+ .+--||.++.+.|.+||-.+|++|-++-...
T Consensus 239 FMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~ 281 (502)
T KOG0574|consen 239 FMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLC 281 (502)
T ss_pred EeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 0 1234788999999999999999986654443
No 372
>PF09202 Rio2_N: Rio2, N-terminal; InterPro: IPR015285 This N-terminal domain is found in RIO2 kinases, and is structurally homologous to the winged helix (wHTH) domain. It adopts a structure consisting of four alpha helices followed by two beta strands and a fifth alpha helix. The domain confers DNA binding properties to the protein, as per other winged helix domains []. ; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A.
Probab=99.88 E-value=2.5e-23 Score=169.69 Aligned_cols=82 Identities=60% Similarity=1.014 Sum_probs=69.3
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHHHHHHH
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKTLV 87 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~al~~l~ 87 (472)
+|+|+++|||||+|||+||+||||||.++|.++|+++.+++.+.|++|.+.+||.+...+|+||++|+.|||++|+++|+
T Consensus 1 ~r~L~~~d~rvL~aiE~gmk~hE~VP~~~I~~~s~l~~~~~~~~L~~L~~~kLv~~~~~~Y~GYrLT~~GYD~LAL~~l~ 80 (82)
T PF09202_consen 1 LRYLSKEDFRVLRAIEMGMKNHEWVPLELIEKISGLSEGEVEKRLKRLVKLKLVSRRNKPYDGYRLTFLGYDYLALKTLV 80 (82)
T ss_dssp --T--HHHHHHHHHHHTTTTT-SSEEHHHHHHHHT--HHHHHHHHHHHHHTTSEEEE-SSS-EEEE-HHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHcccCCccCCHHHHHHHhCcCHHHHHHHHHHHHhcCCccccCCCcceEEEeecchhHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hC
Q 012042 88 NR 89 (472)
Q Consensus 88 ~~ 89 (472)
+|
T Consensus 81 kr 82 (82)
T PF09202_consen 81 KR 82 (82)
T ss_dssp --
T ss_pred cC
Confidence 75
No 373
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.87 E-value=3.7e-22 Score=206.65 Aligned_cols=221 Identities=19% Similarity=0.260 Sum_probs=160.8
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
++||+|.||.||-|.+ .+|+.||||++..-+ |-.- ....++.|+.+|..++|+|+..-.
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlr--Fp~k------------------qesqlR~EVaILq~l~HPGiV~le 629 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLR--FPTK------------------QESQLRNEVAILQNLHHPGIVNLE 629 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeeccc--CCCc------------------hHHHHHHHHHHHHhcCCCCeeEEE
Confidence 7899999999999998 689999999985322 2110 012456799999999997753222
Q ss_pred e-ee-cCCceeEEeecCCCChhhhhccC---ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC---CcEEEE
Q 012042 176 A-VD-CNRHCVIMSLVQGYPLVQVNQLQ---NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD---EKVTMI 243 (472)
Q Consensus 176 ~-i~-~~~~~LVMEyi~G~~L~~l~~~~---~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~---g~vkII 243 (472)
. +. ..+.++|||-+.|.-|.-++... .++ -+..||+.+|.|||-.+|+|+||||+|||+... -++|||
T Consensus 630 ~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 630 CMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred EeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeec
Confidence 1 11 27889999999886665444321 232 367899999999999999999999999999743 369999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc-----chhhhhc-
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF-----LDKELAA- 317 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~-----l~~~~~~- 317 (472)
|||+|+.+... -|+|.+ ++++-+.+|+.+...-|.-..|+||.|+.+|-.+.+..++ +...+.+
T Consensus 710 DFGfARiIgEk----sFRrsV------VGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNA 779 (888)
T KOG4236|consen 710 DFGFARIIGEK----SFRRSV------VGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNA 779 (888)
T ss_pred cccceeecchh----hhhhhh------cCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcc
Confidence 99999977532 344443 3445556777767788888999999999998777764332 1112221
Q ss_pred ---------cCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 318 ---------SGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 318 ---------~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+.++.+--++|..+|+-...+|+|.+.-+.
T Consensus 780 aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 780 AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 235666669999999999999999876654
No 374
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.87 E-value=1.3e-22 Score=192.49 Aligned_cols=216 Identities=17% Similarity=0.231 Sum_probs=155.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|+|.+.+|+|++|.||.|.. .+++.++||++++-+ +..+.+|+.+|..|...
T Consensus 40 Yeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-------------------------kkKIkREikIL~nL~gg-- 92 (338)
T KOG0668|consen 40 YEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-------------------------KKKIKREIKILQNLRGG-- 92 (338)
T ss_pred HHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-------------------------HHHHHHHHHHHHhccCC--
Confidence 67778999999999999988 568899999987431 11245899999999853
Q ss_pred Ccceeeec---------CCceeEEeecCCCChhhhhc---cCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-CC
Q 012042 172 PVPNAVDC---------NRHCVIMSLVQGYPLVQVNQ---LQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-DE 238 (472)
Q Consensus 172 ~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~---~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-~g 238 (472)
|+++.. ....|++||+++.+...+-. ..+...++.+++.||.|+|+.||+|||+||.|+||+. ..
T Consensus 93 --~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~r 170 (338)
T KOG0668|consen 93 --PNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELR 170 (338)
T ss_pred --CCeeehhhhhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhc
Confidence 555542 45789999999988766532 2244568899999999999999999999999999994 45
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCc------c
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGF------L 311 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~------l 311 (472)
+++|||||+|- .-||.... .+....+||.+ |+-+ -...++...|+||||+.+-.++-.+.++ .
T Consensus 171 kLrlIDWGLAE-FYHp~~eY----nVRVASRyfKG-----PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~ 240 (338)
T KOG0668|consen 171 KLRLIDWGLAE-FYHPGKEY----NVRVASRYFKG-----PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 240 (338)
T ss_pred eeeeeecchHh-hcCCCcee----eeeeehhhcCC-----chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH
Confidence 69999999995 45776543 34445566654 2222 2356888999999998775544432111 0
Q ss_pred hh--------------------------h---h---------------hccC-CCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 DK--------------------------E---L---------------AASG-FTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 ~~--------------------------~---~---------------~~~~-~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
++ . + ...+ .+.+--++|+++|..+-++|+++.|--
T Consensus 241 DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam 320 (338)
T KOG0668|consen 241 DQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM 320 (338)
T ss_pred HHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence 00 0 0 0011 346667899999999999999998754
Q ss_pred C
Q 012042 347 D 347 (472)
Q Consensus 347 ~ 347 (472)
.
T Consensus 321 ~ 321 (338)
T KOG0668|consen 321 A 321 (338)
T ss_pred c
Confidence 3
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-21 Score=213.38 Aligned_cols=234 Identities=14% Similarity=0.189 Sum_probs=176.7
Q ss_pred HHHHHHHhCCceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHH
Q 012042 81 LAIKTLVNRGVFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKE 159 (472)
Q Consensus 81 ~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE 159 (472)
+.+..|-...-..+|...||.|.+|.||++.. .+|+-+|||++......-. ..+.|
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~de-----------------------EiE~e 65 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEE-----------------------EIELE 65 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccH-----------------------HHHHH
Confidence 33445555666677889999999999999998 5799999999865432221 23468
Q ss_pred HHHHHHhhhCCCCcceeeec---------CCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCc
Q 012042 160 FAFMKALEDHGFPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGL 222 (472)
Q Consensus 160 ~~~L~~L~~~gi~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GI 222 (472)
+.+|+.+.++ -+++..+.. +..|||||||.|++..++.... . ..-++..++.++.+||...+
T Consensus 66 ynil~~~~~h-pnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkv 144 (953)
T KOG0587|consen 66 YNMLKKYSHH-PNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKV 144 (953)
T ss_pred HHHHHhccCC-CCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcce
Confidence 8888887553 234444442 6789999999999998875321 1 12377889999999999999
Q ss_pred eeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-----ccCCCCcchheeccC
Q 012042 223 IHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-----TDGDDGSDIDTDEGS 297 (472)
Q Consensus 223 IHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-----~~~~~~~~sDiySlG 297 (472)
||||+|-.|||++.++.||++|||.+..++.. ...-.++.+.+|.++|+.. ....++.+||+||||
T Consensus 145 iHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG 215 (953)
T KOG0587|consen 145 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG 215 (953)
T ss_pred eeecccCceEEEeccCcEEEeeeeeeeeeecc---------cccccCcCCCcccccceeeecccCCCCCcccccchhhcc
Confidence 99999999999999999999999999866422 1222345677788777654 457889999999999
Q ss_pred chhhhhhhccCCcch----------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 298 RLSFASISKTAGFLD----------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 298 ~~~f~~~t~~~~~l~----------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++..++..+.++.-| .-..+..|++++-+.|..||..+-+.||+..++++
T Consensus 216 ITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 216 ITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 999888776542211 11124679999999999999999999999998876
No 376
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.4e-22 Score=198.36 Aligned_cols=219 Identities=14% Similarity=0.151 Sum_probs=163.8
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
..++||+|.||.|-+|+. .+|+.+|||+++....-. ++.+ .....|-++|+...|+-+..
T Consensus 172 fLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia------kdEV-------------AHTlTE~RVL~~~~HPFLt~ 232 (516)
T KOG0690|consen 172 FLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA------KDEV-------------AHTLTENRVLQNCRHPFLTS 232 (516)
T ss_pred HHHHhcCCccceEEEEeecccCceeehhhhhhhheee------hHHh-------------hhhhhHHHHHHhccCcHHHH
Confidence 357899999999999988 579999999986321100 0011 12345778888887641100
Q ss_pred c--eeeecCCceeEEeecCCCChhhhhccC----Ch--HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 174 P--NAVDCNRHCVIMSLVQGYPLVQVNQLQ----NP--DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 174 P--~~i~~~~~~LVMEyi~G~~L~~l~~~~----~~--~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
- .....++.|+||||..|+.|.-.+... .. .-+-..|+.+|.|||+.+||.||||.+|+|++.+|++||.||
T Consensus 233 LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 233 LKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred hhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeec
Confidence 0 011237899999999999987665432 11 225678999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------------
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------------ 313 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------------ 313 (472)
|+++.-- .+-....+|++++-+.+|+.+-...|+-..|.|.+|+++|++++++-++..+
T Consensus 313 GLCKE~I---------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e 383 (516)
T KOG0690|consen 313 GLCKEEI---------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME 383 (516)
T ss_pred ccchhcc---------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh
Confidence 9998431 1334456788888778888777788999999999999999999987554322
Q ss_pred hh-hccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 314 EL-AASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 314 ~~-~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
.+ -+..++.+-+.+|--+|..+|.+|-.
T Consensus 384 d~kFPr~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 384 DLKFPRTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred hccCCccCCHHHHHHHHHHhhcChHhhcC
Confidence 11 24678888899999999999999943
No 377
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.87 E-value=2.4e-21 Score=177.53 Aligned_cols=196 Identities=18% Similarity=0.196 Sum_probs=147.8
Q ss_pred ecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
||+|.+|.||++... +|+.++||++....... ....+.+|+..+..+.+.+ ++.++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---------------------~~~~~~~e~~~~~~l~~~~--i~~~~ 57 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---------------------LLEELLREIEILKKLNHPN--IVKLY 57 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---------------------HHHHHHHHHHHHHhcCCCC--eeeEe
Confidence 689999999999985 48999999987543210 0123568999999998754 45555
Q ss_pred ec----CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-CCcEEEEeC
Q 012042 178 DC----NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-DEKVTMIDF 245 (472)
Q Consensus 178 ~~----~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-~g~vkIIDF 245 (472)
.. ...+++|||++|.+|..++... . ...++.+++.++.+||..|++|+||+|.||+++. ++.++|+||
T Consensus 58 ~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~ 137 (215)
T cd00180 58 GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADF 137 (215)
T ss_pred eeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecC
Confidence 43 4689999999999999876432 1 1247889999999999999999999999999998 899999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccc-cccccccC-CCCcchheeccCchhhhhhhccCCcchhhhhccCCCHH
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDG-DDGSDIDTDEGSRLSFASISKTAGFLDKELAASGFTRK 323 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~-~~~~~sDiySlG~~~f~~~t~~~~~l~~~~~~~~~s~~ 323 (472)
|.+.....+.. .... ......+ +|+..... ..+..+|+|++|+.+++. ..
T Consensus 138 ~~~~~~~~~~~---------~~~~-~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------~~ 189 (215)
T cd00180 138 GLSKLLTSDKS---------LLKT-IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------PE 189 (215)
T ss_pred CceEEccCCcc---------hhhc-ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------HH
Confidence 99986543321 0000 1111222 33333333 778899999999999987 56
Q ss_pred HHHHHHHHHhcCcccCCCCCCC
Q 012042 324 DQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 324 ~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+.++|.+|+..+|++||+..+.
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l 211 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEI 211 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHH
Confidence 8899999999999999997653
No 378
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.86 E-value=1e-21 Score=190.37 Aligned_cols=222 Identities=16% Similarity=0.199 Sum_probs=153.1
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.+-||.|..|+|++++. .+|...|||.++....... + .++...+.++...+. +|
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee---~------------------kRILmDldvv~~s~d----cp 151 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEE---N------------------KRILMDLDVVLKSHD----CP 151 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHH---H------------------HHHHHhhhHHhhccC----CC
Confidence 36789999999999998 4699999999874321111 0 123456666665554 36
Q ss_pred eeeec-------CCceeEEeecCC--CChhhhhccCChHH----HHHHHHHHHHHHH-HCCceeccCCCCcEEEcCCCcE
Q 012042 175 NAVDC-------NRHCVIMSLVQG--YPLVQVNQLQNPDS----VFETIIGLVVRLA-EHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 175 ~~i~~-------~~~~LVMEyi~G--~~L~~l~~~~~~~~----i~~qIl~aL~~LH-~~GIIHrDLKP~NILl~~~g~v 240 (472)
.++.+ ...+|.||.+.- ..|...+....|+. +...++.||.||. .+||||||+||+|||+++.|.+
T Consensus 152 yIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~Gni 231 (391)
T KOG0983|consen 152 YIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNI 231 (391)
T ss_pred eeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCE
Confidence 66553 345677887642 12222233345554 4556778888985 6899999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc----chh---
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF----LDK--- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~----l~~--- 313 (472)
|+||||.+..+....|.. |. .....|++ +-.+.|+ ....|+.++||||||++++++.|+..+. .+.
T Consensus 232 KlCDFGIsGrlvdSkAht---rs-AGC~~YMa-PERidp~--~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~l 304 (391)
T KOG0983|consen 232 KLCDFGISGRLVDSKAHT---RS-AGCAAYMA-PERIDPP--DKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVL 304 (391)
T ss_pred Eeecccccceeecccccc---cc-cCCccccC-ccccCCC--CCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHH
Confidence 999999998775544432 11 11222332 2334443 3567999999999999999999975321 111
Q ss_pred ---------hhh-ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 ---------ELA-ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ---------~~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+. ..|||..++..+..||..++.+||.-.+..+-+
T Consensus 305 tkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 305 TKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred HHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 111 357999999999999999999999998887743
No 379
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.86 E-value=4e-22 Score=203.77 Aligned_cols=227 Identities=18% Similarity=0.166 Sum_probs=166.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+..-++||+||||.||-|.. .+|+.+|+|.+... .+| .++ ....+..|-.+|.++... +
T Consensus 187 F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KK-----RiK-------kr~-------ge~maLnEk~iL~kV~s~-F 246 (591)
T KOG0986|consen 187 FRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKK-----RIK-------KRK-------GETMALNEKQILEKVSSP-F 246 (591)
T ss_pred eeeeEEEecccccceeEEEEecchhhHHHHHHHHH-----HHH-------Hhh-------hhHHhhHHHHHHHHhccC-c
Confidence 34558999999999999988 57999999965311 111 111 123466788999988764 4
Q ss_pred Ccceeeec---CCceeEEeecCCCChhhhhc-cC---ChH----HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC---NRHCVIMSLVQGYPLVQVNQ-LQ---NPD----SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~---~~~~LVMEyi~G~~L~~l~~-~~---~~~----~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
.|--.|++ +..||||..|.|++|.-.+- .. .++ -++.+|+.+|.+||+.+||.|||||+|||+|+.|++
T Consensus 247 iVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Ghv 326 (591)
T KOG0986|consen 247 IVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHV 326 (591)
T ss_pred EEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCe
Confidence 34434444 67899999999999865442 11 112 267799999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc----------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF---------- 310 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~---------- 310 (472)
+|.|+|+|+.+.... .+..-.++..+++|+....+.|+...|-||+|+.+|+++.+..++
T Consensus 327 RISDLGLAvei~~g~----------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e 396 (591)
T KOG0986|consen 327 RISDLGLAVEIPEGK----------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE 396 (591)
T ss_pred EeeccceEEecCCCC----------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHH
Confidence 999999999875321 122223443445677667788999999999999999999975432
Q ss_pred -chhh------hhccCCCHHHHHHHHHHHhcCcccCCCCC-CCCCCC
Q 012042 311 -LDKE------LAASGFTRKDQDVIQKFIGGSIEESGSDD-EGSDDG 349 (472)
Q Consensus 311 -l~~~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~-e~~~~~ 349 (472)
++.. .....||.+.+.+.+.+|..+|++|---. +..+|.
T Consensus 397 Evdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~ev 443 (591)
T KOG0986|consen 397 EVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEV 443 (591)
T ss_pred HHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchh
Confidence 1221 12478999999999999999999996666 333333
No 380
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=6.4e-22 Score=200.19 Aligned_cols=220 Identities=15% Similarity=0.146 Sum_probs=158.7
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHH---------HH
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFA---------FM 163 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~---------~L 163 (472)
.+..+||+|+||.|.+|... +.+.+|||+++.... +....... ...|-+ +|
T Consensus 352 nFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVi-----------iQdDDvec--------tm~EKrvLAL~~kppFL 412 (683)
T KOG0696|consen 352 NFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVI-----------IQDDDVEC--------TMVEKRVLALPGKPPFL 412 (683)
T ss_pred ceEEEeccCccceeeeecccCcchhhhhhhhcccee-----------eecCcccc--------eehhhhheecCCCCchH
Confidence 45689999999999999874 577899999874311 00000000 011222 23
Q ss_pred HHhhhCCCCcceeeecCCceeEEeecCCCChhhhhcc----CChHH--HHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 164 KALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVNQL----QNPDS--VFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 164 ~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l~~~----~~~~~--i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
.+|+++ ....++.|+||||+.|++|.-.++. ..|.. ++.+|+-+|-+||++|||.||||..|||++.+
T Consensus 413 ~qlHSc------FQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~e 486 (683)
T KOG0696|consen 413 VQLHSC------FQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE 486 (683)
T ss_pred HHHHHH------hhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccC
Confidence 333321 1223789999999999998665432 24444 56789999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--h---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--D--- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~--- 312 (472)
|.|||+|||+++.-- + +-....+|++++-+++|++.....|+...|.||||+.+|+++.+.+++- +
T Consensus 487 GHiKi~DFGmcKEni-------~--~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e 557 (683)
T KOG0696|consen 487 GHIKIADFGMCKENI-------F--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE 557 (683)
T ss_pred CceEeeecccccccc-------c--CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 999999999998532 1 2233456788887788888888999999999999999999999865431 1
Q ss_pred --hh------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --KE------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --~~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. ..+..+|++-..+...+|...|.+|--.--+.|
T Consensus 558 lF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge 600 (683)
T KOG0696|consen 558 LFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGE 600 (683)
T ss_pred HHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccc
Confidence 11 124567888889999999999999965544444
No 381
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=9.5e-22 Score=200.28 Aligned_cols=231 Identities=15% Similarity=0.197 Sum_probs=165.5
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
+...||+|||+.||+|.+ ...+.||||++......-.. | +..|. ..|.+|+++.+.|.|+. +
T Consensus 467 lLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdE-K-KeNYh-------------KHAcREyrIHKeLDHpR--I 529 (775)
T KOG1151|consen 467 LLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDE-K-KENYH-------------KHACREYRIHKELDHPR--I 529 (775)
T ss_pred HHHHhccccHHHHHHhcccchhheeeEeeehhccchhhH-h-hhhHH-------------HHHHHHHhhhhccCcce--e
Confidence 467899999999999998 56899999999765422111 1 12222 24668999999998743 2
Q ss_pred ceeeec-----CCceeEEeecCCCChhhhhcc------CChHHHHHHHHHHHHHHHH--CCceeccCCCCcEEEcC---C
Q 012042 174 PNAVDC-----NRHCVIMSLVQGYPLVQVNQL------QNPDSVFETIIGLVVRLAE--HGLIHCDFNEFNIMIDD---D 237 (472)
Q Consensus 174 P~~i~~-----~~~~LVMEyi~G~~L~~l~~~------~~~~~i~~qIl~aL~~LH~--~GIIHrDLKP~NILl~~---~ 237 (472)
.+.+++ ...|-|+|||+|.+|.-++.. .....|.-||+.+|.||.+ -.|||-||||.|||+-. .
T Consensus 530 VKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 530 VKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred eeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 333332 678999999999998766432 1344588899999999975 47999999999999963 4
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc--c---cCCCCcchheeccCchhhhhhhccCCcc-
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET--T---DGDDGSDIDTDEGSRLSFASISKTAGFL- 311 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~--~---~~~~~~~sDiySlG~~~f~~~t~~~~~l- 311 (472)
|.+||.|||+++.++......... -.++.-+.+.|.|-|++- . .-.++++.||||.|+++|.-+-++.++-
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdG---meLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDG---MELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred ceeEeeecchhhhccCCccCcccc---eeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 779999999999776543322222 224455667787765542 1 2468899999999999998887765331
Q ss_pred ---hhhh---------------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 312 ---DKEL---------------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 312 ---~~~~---------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
...+ ..+.++++-+..|.+||.+.-++|....+.
T Consensus 687 nqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 687 NQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred chhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 0001 124578889999999999999999655444
No 382
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=1e-21 Score=206.88 Aligned_cols=236 Identities=15% Similarity=0.185 Sum_probs=155.5
Q ss_pred HHHHHHhCCceeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHH
Q 012042 82 AIKTLVNRGVFTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEF 160 (472)
Q Consensus 82 al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~ 160 (472)
.|+.-.-....+...+.||.|+||.|.++... +...||+|.++.. +.+...+. .....|-
T Consensus 620 RLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa-----------DVl~rnQv--------aHVKAER 680 (1034)
T KOG0608|consen 620 RLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKA-----------DVLMRNQV--------AHVKAER 680 (1034)
T ss_pred HHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHH-----------HHHhhhhh--------hhhhhhh
Confidence 33333333444455689999999999999874 4667999977522 11111110 1233566
Q ss_pred HHHHHhhhCCCCcceeee----cCCceeEEeecCCCChhhhhc-cC-ChHH----HHHHHHHHHHHHHHCCceeccCCCC
Q 012042 161 AFMKALEDHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQ-LQ-NPDS----VFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 161 ~~L~~L~~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~-~~-~~~~----i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
.||...... . |.+++. -...|+||+||+|+++..++- .. .++. ++.++..++.+.|..|+|||||||.
T Consensus 681 DILAEADn~-W-VVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPD 758 (1034)
T KOG0608|consen 681 DILAEADNE-W-VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPD 758 (1034)
T ss_pred hhHhhcCCc-c-eEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCcc
Confidence 677666432 1 333332 277999999999999988642 22 2332 5668889999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceec--Cc----------cc---------------chhhhccc----c-chhhh-hccccccc
Q 012042 231 NIMIDDDEKVTMIDFPQMVSV--SH----------QN---------------AQMYFDRD----V-ECIFK-FFRKRFHL 277 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~--~~----------p~---------------a~~~l~rD----~-~~i~~-~f~~~y~~ 277 (472)
|||||.+|.|||.|||++.-+ +| +. ....|.++ . .++.. .+++.-++
T Consensus 759 NILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyi 838 (1034)
T KOG0608|consen 759 NILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYI 838 (1034)
T ss_pred ceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCccc
Confidence 999999999999999998633 12 10 11222222 1 11222 23444556
Q ss_pred cccccccCCCCcchheeccCchhhhhhhccCCcch------------h----hh-hccCCCHHHHHHHHHHHhcCcccC
Q 012042 278 NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------------K----EL-AASGFTRKDQDVIQKFIGGSIEES 339 (472)
Q Consensus 278 ~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------------~----~~-~~~~~s~~~~~~l~k~l~~~p~~R 339 (472)
.|+.+...-++..||.||.|+++|+++.+..++++ | ++ .+..++++...+|.+++. .+++|
T Consensus 839 apevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~R 916 (1034)
T KOG0608|consen 839 APEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSR 916 (1034)
T ss_pred ChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhh
Confidence 77776777899999999999999999998654432 1 11 235578888888888874 34444
No 383
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.85 E-value=2.7e-21 Score=222.42 Aligned_cols=211 Identities=10% Similarity=0.054 Sum_probs=149.3
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
....||+|+||.||+|.. .+|..||||.++..... ...|+..|.++.|+++
T Consensus 694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~l~~l~HpnI-- 745 (968)
T PLN00113 694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI--------------------------PSSEIADMGKLQHPNI-- 745 (968)
T ss_pred cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc--------------------------cHHHHHHHhhCCCCCc--
Confidence 357899999999999998 57999999987522110 1246788889988764
Q ss_pred ceeeec----CCceeEEeecCCCChhhhhccCC---hHHHHHHHHHHHHHHH---HCCceeccCCCCcEEEcCCCcEEEE
Q 012042 174 PNAVDC----NRHCVIMSLVQGYPLVQVNQLQN---PDSVFETIIGLVVRLA---EHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 174 P~~i~~----~~~~LVMEyi~G~~L~~l~~~~~---~~~i~~qIl~aL~~LH---~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
++++++ ...++||||++|++|.+++.... ...++.+++.+|.||| ..+|+||||||.||+++.++.+++.
T Consensus 746 v~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~ 825 (968)
T PLN00113 746 VKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR 825 (968)
T ss_pred ceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE
Confidence 444443 56799999999999998864322 2358899999999999 6699999999999999988877765
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc----------hh
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL----------DK 313 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l----------~~ 313 (472)
||.+..... +. ..+....+++|+......++.++||||||+++++++|++.+.- .+
T Consensus 826 -~~~~~~~~~---------~~----~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 891 (968)
T PLN00113 826 -LSLPGLLCT---------DT----KCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEW 891 (968)
T ss_pred -ecccccccc---------CC----CccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHH
Confidence 665432211 10 1122333445665566789999999999999999999764320 00
Q ss_pred ----------------hhh-ccCCC----HHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----------------ELA-ASGFT----RKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----------------~~~-~~~~s----~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+. ...+. .++.+++.+|++.+|++||++++-.+
T Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 892 ARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 000 00111 13446778999999999999887654
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.85 E-value=4.2e-21 Score=181.20 Aligned_cols=211 Identities=16% Similarity=0.236 Sum_probs=152.2
Q ss_pred CceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeee---
Q 012042 103 KESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVD--- 178 (472)
Q Consensus 103 ~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~--- 178 (472)
+||.||+|... +|+.+|+|++........ ...+.+|+..+.++.+.++ +.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------~~~~~~e~~~~~~l~~~~i--~~~~~~~~ 57 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK---------------------RERILREISILKKLKHPNI--VRLYDVFE 57 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH---------------------HHHHHHHHHHHHhCCCCcH--HHHHhhee
Confidence 58999999995 589999999864321110 1235579999999977653 33332
Q ss_pred -cCCceeEEeecCCCChhhhhccCC------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceec
Q 012042 179 -CNRHCVIMSLVQGYPLVQVNQLQN------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251 (472)
Q Consensus 179 -~~~~~LVMEyi~G~~L~~l~~~~~------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~ 251 (472)
....+++|||+++++|..++.... ...++.+++.++.+||+.||+|+||+|.||+++.++.++|+|||.+...
T Consensus 58 ~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~ 137 (244)
T smart00220 58 DEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQL 137 (244)
T ss_pred eCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeee
Confidence 267899999999999988754321 1247889999999999999999999999999999999999999999866
Q ss_pred Ccccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhccCCcch---h----hh---hc---
Q 012042 252 SHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K----EL---AA--- 317 (472)
Q Consensus 252 ~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~----~~---~~--- 317 (472)
..+.. ...... .+.+ +|+......++.++|+|+||+++++.+++..+... . .. ..
T Consensus 138 ~~~~~----------~~~~~~-~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~ 206 (244)
T smart00220 138 DPGGL----------LTTFVG-TPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF 206 (244)
T ss_pred ccccc----------cccccC-CcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence 43320 011111 2333 44444456788899999999999999987432111 0 00 00
Q ss_pred ----cCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 318 ----SGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 318 ----~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..++.++.+++.+|+..+|++||+..+..+
T Consensus 207 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 207 PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 117788999999999999999999876543
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.85 E-value=1.1e-20 Score=202.66 Aligned_cols=239 Identities=15% Similarity=0.135 Sum_probs=146.0
Q ss_pred eeeecceecccCceeEEEEEe-----------------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHH
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-----------------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRL 154 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-----------------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~ 154 (472)
-|.+.++||+|+||.||+|.. ..++.||||.+........ .+++.... .......
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~-----~~fl~e~~---~~~~~~e 217 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVR-----QDFLKTGT---LAKGSAE 217 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhH-----HHHHhhhh---hhhcccc
Confidence 367789999999999999964 2356899998764322111 11111000 0000111
Q ss_pred HHHHHHHHHHHhhhCCCCcce---eee------------cCCceeEEeecCCCChhhhhccC------------------
Q 012042 155 AALKEFAFMKALEDHGFPVPN---AVD------------CNRHCVIMSLVQGYPLVQVNQLQ------------------ 201 (472)
Q Consensus 155 ~a~rE~~~L~~L~~~gi~vP~---~i~------------~~~~~LVMEyi~G~~L~~l~~~~------------------ 201 (472)
....|+.++.++.+..+..+. .+. .+..+|||||+++++|.+++...
T Consensus 218 ~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l 297 (507)
T PLN03224 218 TGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKI 297 (507)
T ss_pred hhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCch
Confidence 233577777777765432222 111 14579999999999998765321
Q ss_pred ------------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhh
Q 012042 202 ------------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFK 269 (472)
Q Consensus 202 ------------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~ 269 (472)
....++.+++.+|.|||..||+||||||.|||++.++.++|+|||.+........ . .....
T Consensus 298 ~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---~----~~~~g 370 (507)
T PLN03224 298 PDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---F----NPLYG 370 (507)
T ss_pred hhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc---c----Ccccc
Confidence 0123678999999999999999999999999999999999999999865432110 0 00001
Q ss_pred hccccccccccccccC----------------------CCCcchheeccCchhhhhhhccC-Ccc-----hh-------h
Q 012042 270 FFRKRFHLNFQETTDG----------------------DDGSDIDTDEGSRLSFASISKTA-GFL-----DK-------E 314 (472)
Q Consensus 270 ~f~~~y~~~~~~~~~~----------------------~~~~~sDiySlG~~~f~~~t~~~-~~l-----~~-------~ 314 (472)
+.. ..+++|+++... ....+.|+||+|++++++++... +.. .. .
T Consensus 371 ~~t-p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~ 449 (507)
T PLN03224 371 MLD-PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDND 449 (507)
T ss_pred CCC-cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccch
Confidence 111 112233322110 11234799999999999887532 110 00 0
Q ss_pred h--------h------ccCCCHHHHHHHHHHHhcCc---ccCCCCCCCC
Q 012042 315 L--------A------ASGFTRKDQDVIQKFIGGSI---EESGSDDEGS 346 (472)
Q Consensus 315 ~--------~------~~~~s~~~~~~l~k~l~~~p---~~R~s~~e~~ 346 (472)
+ . ....+....++|.+||..+| .+|+|+++-+
T Consensus 450 ~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL 498 (507)
T PLN03224 450 LNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL 498 (507)
T ss_pred HHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence 0 0 11245667789999999765 6899987644
No 386
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.85 E-value=2.5e-21 Score=200.49 Aligned_cols=193 Identities=20% Similarity=0.255 Sum_probs=141.6
Q ss_pred cccHHHHHHHHhCCceeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHH
Q 012042 77 GYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLA 155 (472)
Q Consensus 77 g~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~ 155 (472)
||--+.|-.+.... |.|....|+|-||.|.+|.+. -|..||||+++......+ .
T Consensus 420 GYYrv~igE~LD~R--Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~K-----------------------t 474 (752)
T KOG0670|consen 420 GYYRVRIGELLDSR--YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHK-----------------------T 474 (752)
T ss_pred ceEEEehhhhhcce--eEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhh-----------------------h
Confidence 44444444444443 677888999999999999994 588999999986533222 1
Q ss_pred HHHHHHHHHHhhhCC----CCcceeee----cCCceeEEeecCCCChhhhhc---------cCChHHHHHHHHHHHHHHH
Q 012042 156 ALKEFAFMKALEDHG----FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQ---------LQNPDSVFETIIGLVVRLA 218 (472)
Q Consensus 156 a~rE~~~L~~L~~~g----i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~---------~~~~~~i~~qIl~aL~~LH 218 (472)
-.+|+.+|++|..+. +.+...+. -+..|||+|-+. ..|.+++. ......+..|++-+|..|.
T Consensus 475 Gl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK 553 (752)
T KOG0670|consen 475 GLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK 553 (752)
T ss_pred hhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH
Confidence 247999999997653 11122221 277899999764 45555432 1234568999999999999
Q ss_pred HCCceeccCCCCcEEEcCC-CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccC
Q 012042 219 EHGLIHCDFNEFNIMIDDD-EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGS 297 (472)
Q Consensus 219 ~~GIIHrDLKP~NILl~~~-g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG 297 (472)
.+||+|+||||.||||++. ..+||||||.|...... .++-|.-.+|+-+|++.++-.|++..|+||.|
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en-----------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvg 622 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGSASFASEN-----------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVG 622 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCccccccccc-----------cccHHHHHHhccCcceeecCcccCCccceeec
Confidence 9999999999999999965 45899999999765422 23344445566688888899999999999999
Q ss_pred chhhhhhhc
Q 012042 298 RLSFASISK 306 (472)
Q Consensus 298 ~~~f~~~t~ 306 (472)
|++|++-|+
T Consensus 623 ctLYElYtG 631 (752)
T KOG0670|consen 623 CTLYELYTG 631 (752)
T ss_pred eeeEEeecc
Confidence 999888875
No 387
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.85 E-value=6.6e-21 Score=213.82 Aligned_cols=224 Identities=16% Similarity=0.146 Sum_probs=160.7
Q ss_pred eecceecccCceeEEEEEeC--CCC----EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 94 AVGRQLGVGKESDIFEVARE--DGT----VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~--~g~----~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
.+...||+|.||.||.|... +|. .||||.++.... +.. ...+.+|..+|.++.
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~--------------------~~~Fl~Ea~~m~~f~ 753 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQE--------------------VSDFLKEALLMSKFD 753 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHH--------------------HHHHHHHHHHHhcCC
Confidence 46689999999999999873 354 388887754321 211 123568999999999
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------ChHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------NPDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
|++| .+.++. ...+|++|||+|++|..++... +...++.+|+.++.||++.++|||||...
T Consensus 754 HpNi--v~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaR 831 (1025)
T KOG1095|consen 754 HPNI--VSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAAR 831 (1025)
T ss_pred Ccce--eeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhh
Confidence 8653 333332 6689999999999999987533 11247889999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
|+|++....|||.|||+|+.+. ... |...+.... . .---++|+....+.++.+|||||||+.+.|..|.-..+
T Consensus 832 NCLL~~~r~VKIaDFGlArDiy--~~~-yyr~~~~a~---l-PvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~P 904 (1025)
T KOG1095|consen 832 NCLLDERRVVKIADFGLARDIY--DKD-YYRKHGEAM---L-PVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATP 904 (1025)
T ss_pred heeecccCcEEEcccchhHhhh--hch-heeccCccc---c-ceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCC
Confidence 9999999999999999998432 111 111111100 0 00123555556799999999999999999988832111
Q ss_pred ------chh--------hh-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 ------LDK--------EL-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 ------l~~--------~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+. .+ .+......+=+++..|...+|++||+-....+
T Consensus 905 Y~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 905 YPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 111 11 24556777779999999999999999887766
No 388
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.84 E-value=3.3e-21 Score=201.75 Aligned_cols=232 Identities=15% Similarity=0.122 Sum_probs=166.4
Q ss_pred HHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHH
Q 012042 80 FLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKE 159 (472)
Q Consensus 80 ~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE 159 (472)
..++..+-.+.++ ++++||+|.||.|.+|....+..||||.+|.....-. +..+.+|
T Consensus 529 ~~al~EfPRs~L~--~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~---------------------r~~F~kE 585 (807)
T KOG1094|consen 529 GPALVEFPRSRLR--FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA---------------------RNDFLKE 585 (807)
T ss_pred Ccchhhcchhhee--hhhhhcCcccceeEEEEecCceEEEEeecCcccchhH---------------------HHHHHHH
Confidence 3455555555544 3799999999999999987779999999986532111 2245689
Q ss_pred HHHHHHhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC-h-------HHHHHHHHHHHHHHHHCCceeccC
Q 012042 160 FAFMKALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-P-------DSVFETIIGLVVRLAEHGLIHCDF 227 (472)
Q Consensus 160 ~~~L~~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-~-------~~i~~qIl~aL~~LH~~GIIHrDL 227 (472)
+++|.+|+|++| ..+++. ...|++|||++.++|.+++.... | ..++.||+.+|+||.+.++|||||
T Consensus 586 IkiLsqLkhPNI--veLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~ 663 (807)
T KOG1094|consen 586 IKILSRLKHPNI--VELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDL 663 (807)
T ss_pred HHHHhccCCCCe--eEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccc
Confidence 999999987542 333332 66899999999999999864331 1 248999999999999999999999
Q ss_pred CCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhhc
Q 012042 228 NEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 228 KP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
.|.|+|++.++++||+|||+++.+-. .|...+..-+--+.. ++.+-..-+.++.+||+|.||++++|..+-
T Consensus 664 a~rNcLv~~e~~iKiadfgmsR~lys--------g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~ 735 (807)
T KOG1094|consen 664 ATRNCLVDGEFTIKIADFGMSRNLYS--------GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFML 735 (807)
T ss_pred cccceeecCcccEEecCccccccccc--------CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHH
Confidence 99999999999999999999985421 122222111111122 233434678999999999999999776552
Q ss_pred cC--C--cc-hh------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 307 TA--G--FL-DK------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 307 ~~--~--~l-~~------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.. + .+ +. -..+..+..++-++|-.|...+-++|||-++
T Consensus 736 C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~ 796 (807)
T KOG1094|consen 736 CREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQ 796 (807)
T ss_pred HhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHH
Confidence 11 0 00 00 1123457778889999999999999998664
No 389
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.83 E-value=2.5e-21 Score=187.11 Aligned_cols=215 Identities=15% Similarity=0.194 Sum_probs=151.3
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
+.||.|+||.|++-.+ ++|+..|||.++..... ....++..|.....+-.. +|+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---------------------keq~rll~e~d~~mks~~----cp~ 124 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---------------------KEQKRLLMEHDTVMKSSN----CPN 124 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---------------------HHHHHHHHHHHHHHhhcC----CcH
Confidence 6799999999999988 68999999998754320 011234566666555443 477
Q ss_pred eeec-------CCceeEEeecCCCChhhh-------hccCChHHHHH----HHHHHHHHHH-HCCceeccCCCCcEEEcC
Q 012042 176 AVDC-------NRHCVIMSLVQGYPLVQV-------NQLQNPDSVFE----TIIGLVVRLA-EHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 176 ~i~~-------~~~~LVMEyi~G~~L~~l-------~~~~~~~~i~~----qIl~aL~~LH-~~GIIHrDLKP~NILl~~ 236 (472)
++.+ +..||.||+++ .+|..+ .....|+.++- ..+.||.||. ...|||||+||+|||++.
T Consensus 125 IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr 203 (361)
T KOG1006|consen 125 IVKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR 203 (361)
T ss_pred HHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec
Confidence 6653 67899999996 333322 22335666554 3468899995 578999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-c-cCCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-T-DGDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
.|.|||||||.+..+...-|.. .|..| ++| ++|+.. . ..-++.+||+||||.+++|..|+..+--.|
T Consensus 204 ~G~vKLCDFGIcGqLv~SiAkT---~daGC------rpY-mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~ 273 (361)
T KOG1006|consen 204 HGDVKLCDFGICGQLVDSIAKT---VDAGC------RPY-MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD 273 (361)
T ss_pred CCCEeeecccchHhHHHHHHhh---hccCC------ccc-cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH
Confidence 9999999999997664433322 24333 122 344433 2 334899999999999999998875432111
Q ss_pred -------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...+-.|+..+...|.-|+-.+-.+||.-.+...
T Consensus 274 svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 274 SVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1123458999999999999999999998877655
No 390
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.83 E-value=7.5e-21 Score=187.60 Aligned_cols=222 Identities=15% Similarity=0.178 Sum_probs=151.3
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.+.||+|++|.|--|.. .+|..+|||++.....- +|.+..+|+.++..++.+ |
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gH----------------------sR~RvfREVe~f~~Cqgh----~ 136 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGH----------------------SRSRVFREVETFYQCQGH----K 136 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCch----------------------HHHHHHHHHHHHHHhcCC----c
Confidence 47899999999999988 78999999998532111 233556899999998864 5
Q ss_pred eeee---c----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc--
Q 012042 175 NAVD---C----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK-- 239 (472)
Q Consensus 175 ~~i~---~----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~-- 239 (472)
+++. + .+.|||||-|.|++|...++.. ....+...|+.+|.+||..||.||||||+|||-.+.+.
T Consensus 137 nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vs 216 (463)
T KOG0607|consen 137 NILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVS 216 (463)
T ss_pred cHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcC
Confidence 5443 2 7899999999999987765322 33458999999999999999999999999999975543
Q ss_pred -EEEEeCCCceec--Ccccchhhhccccchhhhhcccccccccccc-----ccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 240 -VTMIDFPQMVSV--SHQNAQMYFDRDVECIFKFFRKRFHLNFQET-----TDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 240 -vkIIDFG~A~~~--~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-----~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
||||||.++... .++-+. .-.+++. +=++.--.++|+.. ..-.|+.++|.||||+++|-++.+-.++.
T Consensus 217 PvKiCDfDLgSg~k~~~~~sp-astP~L~---tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFv 292 (463)
T KOG0607|consen 217 PVKICDFDLGSGIKLNNDCSP-ASTPELL---TPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFV 292 (463)
T ss_pred ceeeeccccccccccCCCCCC-CCCcccc---CcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCcc
Confidence 899999876432 222110 0001111 11111122333321 12568889999999999988887644332
Q ss_pred hh----------------------hh---------hcc-CCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 DK----------------------EL---------AAS-GFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ~~----------------------~~---------~~~-~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
-. .| ..| .+|.+-+++|..++-.++.+|-++..-..
T Consensus 293 G~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 293 GHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11 01 112 25666678889999999999977655443
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.83 E-value=1.8e-20 Score=188.69 Aligned_cols=176 Identities=18% Similarity=0.169 Sum_probs=129.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.|...+|+|.||.|-.|.+ ..+..||||+++. +. .-+.++.-|+.+|.+|.+.
T Consensus 91 y~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-------V~----------------kYreAa~iEi~vLqki~~~-- 145 (415)
T KOG0671|consen 91 YEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN-------VD----------------KYREAALIEIEVLQKINES-- 145 (415)
T ss_pred eehhhhhcCCcccceEEEeecCCCceehHHHHHH-------HH----------------HHhhHHHHHHHHHHHHHhc--
Confidence 56668899999999999998 4589999998752 11 1245777899999999764
Q ss_pred Ccce-------e---eec-CCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 172 PVPN-------A---VDC-NRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 172 ~vP~-------~---i~~-~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
.|+ . +++ +..|||+|.+ |.++.+.+... . ...+..|++.++.+||+.+++|-||||+||
T Consensus 146 -DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENI 223 (415)
T KOG0671|consen 146 -DPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENI 223 (415)
T ss_pred -CCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheE
Confidence 233 1 122 6778999987 55666655321 1 235889999999999999999999999999
Q ss_pred EEcC--------------------CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchh
Q 012042 233 MIDD--------------------DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDID 292 (472)
Q Consensus 233 Ll~~--------------------~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sD 292 (472)
|+.+ .-.|+|||||.|+....-. ...++++.+-+|++..+=-++..||
T Consensus 224 Lfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h------------s~iVsTRHYRAPEViLgLGwS~pCD 291 (415)
T KOG0671|consen 224 LFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH------------STIVSTRHYRAPEVILGLGWSQPCD 291 (415)
T ss_pred EEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc------------ceeeeccccCCchheeccCcCCccC
Confidence 9842 1238999999997543111 1223444444666666777899999
Q ss_pred eeccCchhhhhhhcc
Q 012042 293 TDEGSRLSFASISKT 307 (472)
Q Consensus 293 iySlG~~~f~~~t~~ 307 (472)
|||+|++++|+.|+.
T Consensus 292 vWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 292 VWSIGCILVELYTGE 306 (415)
T ss_pred ceeeeeEEEEeeccc
Confidence 999999998888863
No 392
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.83 E-value=6.7e-21 Score=175.19 Aligned_cols=220 Identities=15% Similarity=0.182 Sum_probs=152.5
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
.++||+|.+|+||+|+. .+++.||+|..|.....-. ....+.+|+-+|+.|.|.++ .
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddeg--------------------vpssalreicllkelkhkni--v 64 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG--------------------VPSSALREICLLKELKHKNI--V 64 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC--------------------CcHHHHHHHHHHHHhhhcce--e
Confidence 36799999999999998 5699999999886432111 11256789999999999763 3
Q ss_pred eeeec----CCceeEEeecCCCChhhhhcc----CCh---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 175 NAVDC----NRHCVIMSLVQGYPLVQVNQL----QNP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 175 ~~i~~----~~~~LVMEyi~G~~L~~l~~~----~~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
+.++. ....+|+|||.. .|..+... -++ ..++.|+++++.++|++++.||||||.|+||+.+|.+|++
T Consensus 65 rl~dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkla 143 (292)
T KOG0662|consen 65 RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_pred ehhhhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEec
Confidence 44432 567899999973 44443221 122 3578899999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhc-cCCc----c------
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISK-TAGF----L------ 311 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~-~~~~----l------ 311 (472)
|||+|+...-|- .|...-.-+-++-+|+.. ....|+...|+||-|+.+-+.... ++-+ .
T Consensus 144 dfglarafgipv---------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkr 214 (292)
T KOG0662|consen 144 DFGLARAFGIPV---------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR 214 (292)
T ss_pred ccchhhhcCCce---------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHH
Confidence 999998765542 221111122233355554 346788899999999776554331 1000 0
Q ss_pred --------------------------------hhhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 --------------------------------DKELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 --------------------------------~~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+...-+..+..=++++++++.-+|..|.|+++-..
T Consensus 215 if~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 215 IFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred HHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 000011234444578999999999999999887554
No 393
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=9.9e-21 Score=206.15 Aligned_cols=218 Identities=13% Similarity=0.123 Sum_probs=158.4
Q ss_pred cceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 96 GRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
.+.||+|.||+||+|... +...||||.++.....- .+..++||+.+|..|.|+
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~---------------------~~~dF~REaeLla~l~H~ 549 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ---------------------ARQDFRREAELLAELQHP 549 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH---------------------HHHHHHHHHHHHHhccCC
Confidence 688999999999999863 23569999876432211 123567999999999997
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC----------Ch----------HHHHHHHHHHHHHHHHCCceec
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----------NP----------DSVFETIIGLVVRLAEHGLIHC 225 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----------~~----------~~i~~qIl~aL~~LH~~GIIHr 225 (472)
+| .++++. +.+|+|+|||.-++|.+++... .+ ..++.||+.+|.||-++.+|||
T Consensus 550 nI--VrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHR 627 (774)
T KOG1026|consen 550 NI--VRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHR 627 (774)
T ss_pred Ce--EEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 63 555553 6789999999999999975311 11 1488999999999999999999
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhh-hhccccccccccccccCCCCcchheeccCchhhhhh
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIF-KFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASI 304 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~-~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~ 304 (472)
||-..|+||.++-.|||.|||+++..- .+|...+. +-+-+---++|+-...+.+|..||||||||++.|..
T Consensus 628 DLATRNCLVge~l~VKIsDfGLsRdiY--------ssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIF 699 (774)
T KOG1026|consen 628 DLATRNCLVGENLVVKISDFGLSRDIY--------SSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIF 699 (774)
T ss_pred chhhhhceeccceEEEecccccchhhh--------hhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhh
Confidence 999999999999999999999997542 11211111 001111224555557899999999999999998777
Q ss_pred hccC-C---cchh---------hh-h-ccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 305 SKTA-G---FLDK---------EL-A-ASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 305 t~~~-~---~l~~---------~~-~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
+-.. + .-+. .+ . +-+-..++-.++..|-..+|.+|||-.|
T Consensus 700 syG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~e 754 (774)
T KOG1026|consen 700 SYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKE 754 (774)
T ss_pred ccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 6211 1 0011 11 1 3457778889999999999999998643
No 394
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.83 E-value=5e-21 Score=202.45 Aligned_cols=225 Identities=16% Similarity=0.141 Sum_probs=162.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.-....+||+|+|=+||+|.+ .+|..||-=.++ ++.+ ... .....++..|+++|+.|.|++
T Consensus 41 y~k~~evLGrGafKtVYka~De~~giEVAWnqvk-----~~d~------~q~-------~~~leR~~~Ev~lLKsL~H~N 102 (632)
T KOG0584|consen 41 YLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVK-----IRDV------TQS-------PEELERLYSEVHLLKSLKHPN 102 (632)
T ss_pred eeehhhhcccccceeeeeccccccchhhHHHHHh-----HHHh------hcC-------hHHHHHHHHHHHHHccCCCCc
Confidence 334468899999999999999 467776643221 1111 100 011245668999999999854
Q ss_pred CCcceeeec------CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHC--CceeccCCCCcEEEc-
Q 012042 171 FPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEH--GLIHCDFNEFNIMID- 235 (472)
Q Consensus 171 i~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~--GIIHrDLKP~NILl~- 235 (472)
| -+++.. ....+|.|++..|+|..++... + ...+++||+.+|.|||.+ .|||||||-.||+|+
T Consensus 103 I--irfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG 180 (632)
T KOG0584|consen 103 I--IRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG 180 (632)
T ss_pred e--eeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC
Confidence 2 333332 2356789999999999875321 2 346999999999999976 699999999999998
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc----
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL---- 311 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l---- 311 (472)
..|.|||.|+|+|.....+.|.. ..+++-.++|++| .+.|+...||||||.-+++++|...+--
T Consensus 181 ~~G~VKIGDLGLAtl~r~s~aks-----------vIGTPEFMAPEmY-EE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n 248 (632)
T KOG0584|consen 181 NLGEVKIGDLGLATLLRKSHAKS-----------VIGTPEFMAPEMY-EENYNELVDVYAFGMCMLEMVTSEYPYSECTN 248 (632)
T ss_pred CcCceeecchhHHHHhhccccce-----------eccCccccChHHH-hhhcchhhhhhhhhHHHHHHHhccCChhhhCC
Confidence 55899999999998665554432 2455566777765 6889999999999999999999643211
Q ss_pred -----hh---hhhc----cCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 312 -----DK---ELAA----SGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 312 -----~~---~~~~----~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+ .+.+ .-=..+.+++|++||.. ..+|+|+.|++.+.
T Consensus 249 ~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 249 PAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred HHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhCh
Confidence 11 1111 12356789999999999 88999999999876
No 395
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.82 E-value=9.7e-20 Score=178.10 Aligned_cols=168 Identities=23% Similarity=0.376 Sum_probs=128.8
Q ss_pred ceec-ccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLG-VGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG-~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..|| .||.|.||.+... +..++||.+..+..-.+-+ .. .+.+....+.++.+|+.++.+|.+.|+++|.
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~-------~~--~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~ 106 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLS-------KD--RYLFTGLERTRAFAEFRLLAQLYEAGLPVPR 106 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhh-------hh--cccccchhhhHHHHHHHHHHHHHhCCCCCce
Confidence 5577 8889999999774 7789999986432111110 00 1112223345678999999999999999999
Q ss_pred eeec--------CCceeEEeecCC-CChhhhhccC-ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 176 AVDC--------NRHCVIMSLVQG-YPLVQVNQLQ-NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 176 ~i~~--------~~~~LVMEyi~G-~~L~~l~~~~-~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
++.. ...++||||++| .+|.+++... .+...+.+|+.+|.+||++||+||||||.|||++.++.++||||
T Consensus 107 pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDf 186 (239)
T PRK01723 107 PIAARVVRHGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDF 186 (239)
T ss_pred eEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEEC
Confidence 8874 134699999998 6888775432 35667899999999999999999999999999998889999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccc
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL 277 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~ 277 (472)
|.+.... | .....+|+..+.++|.+.|+-
T Consensus 187 g~~~~~~-~--~~~~~~nl~rl~rs~~~~~~~ 215 (239)
T PRK01723 187 DRGELRT-P--TRWKQANLARLLRSFNKEQGK 215 (239)
T ss_pred CCcccCC-C--HHHHHHHHHHHHHHHHHHhcc
Confidence 9998754 4 456788999999999887664
No 396
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=1.5e-20 Score=186.92 Aligned_cols=209 Identities=23% Similarity=0.415 Sum_probs=167.7
Q ss_pred HHHHHHHHhCCceeeecceecccCceeEEEEEeC---C--------CCEEEEEEeecCcchhHHhhhhhHHhhhccch--
Q 012042 80 FLAIKTLVNRGVFTAVGRQLGVGKESDIFEVARE---D--------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSY-- 146 (472)
Q Consensus 80 ~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~---~--------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~-- 146 (472)
-+-+++|++.|++..|.++|..|+++.|+.|... + -+.+|||+++ +....+|+...|+...-+|
T Consensus 241 RLLlyK~iN~gvle~i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfK---TTLnEFKnRd~YiKDDfRFKD 317 (531)
T KOG2269|consen 241 RLLLYKWINQGVLESIDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFK---TTLNEFKNRDEYIKDDFRFKD 317 (531)
T ss_pred eehHHHHHhhhhHHhhhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHH---HHHHHHhhhhhhhccchhhhh
Confidence 4668899999999999999999999999999541 1 2358999996 4455567788888776554
Q ss_pred -----hhHHHhHHHHHHHHHHHHHhhhCCCCcceeeecCCceeEEeecCCC--ChhhhhccC----ChHHHHHHHHHHHH
Q 012042 147 -----NWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGY--PLVQVNQLQ----NPDSVFETIIGLVV 215 (472)
Q Consensus 147 -----~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~--~L~~l~~~~----~~~~i~~qIl~aL~ 215 (472)
+...+.+.||++|+.+|.+++.+|+++|.++....++|||.||... ....+.... .....+.|+..++.
T Consensus 318 RFSK~NpR~i~~mWAEkEmhNL~RMq~~GlpcP~vV~lkkhvLVMsFiGd~~~aAPkLK~v~l~d~E~~~aY~q~~~~M~ 397 (531)
T KOG2269|consen 318 RFSKQNPRGILKMWAEKEMHNLSRMQKHGLPCPQVVKLKKHVLVMSFIGDQGLAAPKLKNVELTDDERRNAYDQVQSIMC 397 (531)
T ss_pred hhcccCcHHHHHHHHHHHHHHHHHHHhcCCCCCceeeeecceEEEEeecCCCCCCccccccccChHHHHHHHHHHHHHHH
Confidence 2455778999999999999999999999999999999999999732 222232211 22347889999998
Q ss_pred HH-HHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchhee
Q 012042 216 RL-AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294 (472)
Q Consensus 216 ~L-H~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiy 294 (472)
.| |++-+||.||+.+|||..+ |++++||..+++..+||.+.++|.||+.|+.+||.+ .|.+.. +
T Consensus 398 ~lY~Ec~LVHADlSEyN~Lw~~-gKvw~IDVsQsvep~HP~~LeFL~RDc~Ni~~FF~r-~G~pn~-~------------ 462 (531)
T KOG2269|consen 398 RLYKECLLVHADLSEYNLLWTP-GKVWVIDVSQSVEPSHPRSLEFLTRDCQNIITFFTR-IGTPNL-P------------ 462 (531)
T ss_pred HHHHhhheeecchhhhhheecC-CceEEEechhccCCCCcchhHHHHHHHHHHHHHHHh-cCCCCc-c------------
Confidence 88 7899999999999999986 599999999999999999999999999999999986 344321 1
Q ss_pred ccCchhhhhhhcc
Q 012042 295 EGSRLSFASISKT 307 (472)
Q Consensus 295 SlG~~~f~~~t~~ 307 (472)
+ -+-+|.++|+-
T Consensus 463 t-~~qLFn~itgL 474 (531)
T KOG2269|consen 463 T-YVQLFNLITGL 474 (531)
T ss_pred c-HHHHHHHHhcc
Confidence 0 14678888863
No 397
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.81 E-value=2.8e-19 Score=189.28 Aligned_cols=211 Identities=18% Similarity=0.295 Sum_probs=143.4
Q ss_pred HHHHhh---CCCCCCCCHHHHHHHhCCCCchh---HHHHHHHHhcccccccCCCccCcccccccccHHHHHHHHhCCcee
Q 012042 20 TAVEMG---MRNHEIVPSELVHRIASLKHGGT---YKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKTLVNRGVFT 93 (472)
Q Consensus 20 ~~ie~~---~~~~e~Vp~~~i~~~a~l~~~~~---~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~al~~l~~~~~i~ 93 (472)
++|..| +.+.+++|.+++..+++|.+... ...+..++...|-......|..| .
T Consensus 63 ~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~f---------------------d 121 (437)
T TIGR01982 63 TFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEF---------------------E 121 (437)
T ss_pred hhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhC---------------------C
Confidence 466666 77899999999999999988732 44555555543321111111111 1
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcchhH-----HhhhhhHHhhhc----cch---hhHH------HhHHH
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFR-----AVKSKRDYLRHR----NSY---NWLY------LSRLA 155 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~-----~~k~~r~yl~~~----~~~---~~~~------~~r~~ 155 (472)
.++||.|++|+||+|+..+|+.||||+.+++..... .++.....+... ... .... .....
T Consensus 122 --~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 199 (437)
T TIGR01982 122 --EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD 199 (437)
T ss_pred --CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence 368999999999999999999999999987643211 111111111110 000 1111 11234
Q ss_pred HHHHHHHHHHhhh-----CCCCcceeee--cCCceeEEeecCCCChhhhhccC----ChHHHHHHHHH-HHHHHHHCCce
Q 012042 156 ALKEFAFMKALED-----HGFPVPNAVD--CNRHCVIMSLVQGYPLVQVNQLQ----NPDSVFETIIG-LVVRLAEHGLI 223 (472)
Q Consensus 156 a~rE~~~L~~L~~-----~gi~vP~~i~--~~~~~LVMEyi~G~~L~~l~~~~----~~~~i~~qIl~-aL~~LH~~GII 223 (472)
+.+|+.++.++.. +++.+|.++. .+..+|||||++|.+|.++.... ....++..++. .+..+|..|++
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~ 279 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFF 279 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCce
Confidence 6678888888863 4577888875 36789999999999998764321 33456666665 56788999999
Q ss_pred eccCCCCcEEEcCCCcEEEEeCCCceecCc
Q 012042 224 HCDFNEFNIMIDDDEKVTMIDFPQMVSVSH 253 (472)
Q Consensus 224 HrDLKP~NILl~~~g~vkIIDFG~A~~~~~ 253 (472)
|+|+||.||++++++.++|+|||++..++.
T Consensus 280 H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 280 HADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred eCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999988764
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.80 E-value=5e-19 Score=166.19 Aligned_cols=185 Identities=17% Similarity=0.235 Sum_probs=135.9
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.+.+.||.|++|.||++... +++.+|||.+...... . ....+.+|+..+.++.+.++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~--------------------~~~~~~~e~~~~~~~~~~~i- 59 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-K--------------------QREEFLREIRILKKLKHPNI- 59 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-H--------------------HHHHHHHHHHHHHhCCCCCh-
Confidence 46789999999999999995 4899999998744322 0 01245678999999976543
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccCC-------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++.. ...+++|||++|++|..++.... ...++.+++.++.+||.+|++|+|++|.||+++.++.++
T Consensus 60 -~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~ 138 (225)
T smart00221 60 -VKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVK 138 (225)
T ss_pred -hhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 333332 67899999999999988764321 234788999999999999999999999999999989999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCC
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAG 309 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~ 309 (472)
|+|||.+.....+.+. ....+.......+|+.. ....++.++|+|+||+++++.++++.+
T Consensus 139 l~d~g~~~~~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~p 199 (225)
T smart00221 139 LADFGLARFIHRDLAA--------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEP 199 (225)
T ss_pred EeeCceeeEecCcccc--------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999866543210 11112222223344443 446677799999999999999997643
No 399
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.1e-19 Score=180.27 Aligned_cols=216 Identities=17% Similarity=0.208 Sum_probs=163.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.+..+||+|++++|..++. .+.+.+|+|+++.. .+.......| .+.|-.+..+...
T Consensus 252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkke------------l~nddedidw-------vqtek~vfe~asn--- 309 (593)
T KOG0695|consen 252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKE------------LVNDDEDIDW-------VQTEKHVFEQASN--- 309 (593)
T ss_pred ceeeeeecCcchhhhhheehcccceeeehhhHHHH------------hcCCcccchh-------HHhhHHHHHhccC---
Confidence 46679999999999999998 57889999987521 1222223334 4456666655543
Q ss_pred Ccceeeec-------CCceeEEeecCCCChhhhhcc--CChHH----HHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVDC-------NRHCVIMSLVQGYPLVQVNQL--QNPDS----VFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~--~~~~~----i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
.|..++. .+.++|.||++|++|.-.++. ..|++ +-..|+-+|.|||++|||.||||..|+|++..|
T Consensus 310 -~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg 388 (593)
T KOG0695|consen 310 -NPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG 388 (593)
T ss_pred -CCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC
Confidence 3766653 678999999999998665432 24543 456899999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc-------
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL------- 311 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l------- 311 (472)
.+||.|+|+++.--.| -....+|++++-+++|+++.+..|+...|.|++|+.+|+++.++.++-
T Consensus 389 hikltdygmcke~l~~---------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~ 459 (593)
T KOG0695|consen 389 HIKLTDYGMCKEGLGP---------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP 459 (593)
T ss_pred ceeecccchhhcCCCC---------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc
Confidence 9999999999854333 334567888888889998889999999999999999999998765320
Q ss_pred -------------hhhhh-ccCCCHHHHHHHHHHHhcCcccCC
Q 012042 312 -------------DKELA-ASGFTRKDQDVIQKFIGGSIEESG 340 (472)
Q Consensus 312 -------------~~~~~-~~~~s~~~~~~l~k~l~~~p~~R~ 340 (472)
++.+. +...|-+-..+|..+|..+|.+|-
T Consensus 460 d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 460 DMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhc
Confidence 11111 234566667899999999999883
No 400
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.80 E-value=5.3e-19 Score=196.55 Aligned_cols=139 Identities=12% Similarity=0.142 Sum_probs=108.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||.|+||.||+|.+. +++.||||+++........ ....+.+|+.++..+.|+++
T Consensus 6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~-------------------~~~~~~~E~~~l~~l~hp~I 66 (669)
T cd05610 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKN-------------------MVHQVQAERDALALSKSPFI 66 (669)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHH-------------------HHHHHHHHHHHHHhcCCCCc
Confidence 567799999999999999994 7999999998632111000 01235578899998988654
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..||||||+.|++|..++... ....++.+|+.+|.|||.+|||||||||.||||+.++.++
T Consensus 67 --v~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 144 (669)
T cd05610 67 --VHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIK 144 (669)
T ss_pred --CeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEE
Confidence 33332 26689999999999998876421 1235788999999999999999999999999999999999
Q ss_pred EEeCCCceecC
Q 012042 242 MIDFPQMVSVS 252 (472)
Q Consensus 242 IIDFG~A~~~~ 252 (472)
|+|||+++...
T Consensus 145 L~DFGls~~~~ 155 (669)
T cd05610 145 LTDFGLSKVTL 155 (669)
T ss_pred EEeCCCCcccc
Confidence 99999997543
No 401
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=1.2e-18 Score=165.16 Aligned_cols=138 Identities=22% Similarity=0.282 Sum_probs=109.4
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
+.||+|++|.||+|.. .|..|+||+............ ....+..+.+|+.++..+.+.++++|.+
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~--------------~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 66 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELD--------------ERIRRERTRREARIMSRARKAGVNVPAV 66 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHH--------------HHHHHHHHHHHHHHHHHHHHCCCCCCeE
Confidence 5689999999999987 678899998653221111100 0012335678999999999999999988
Q ss_pred e--ecCCceeEEeecCCCChhhhhccCCh--HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 177 V--DCNRHCVIMSLVQGYPLVQVNQLQNP--DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 177 i--~~~~~~LVMEyi~G~~L~~l~~~~~~--~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
+ .....+++|||++|.+|.+++....+ ..++.+++.+|.+||..|++|||++|.|||++ ++.++|||||.+..
T Consensus 67 ~~~~~~~~~lv~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 67 YFVDPENFIIVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEeCCCCEEEEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 7 45778999999999999887643322 36888999999999999999999999999999 78899999999875
No 402
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.79 E-value=1.2e-19 Score=193.03 Aligned_cols=250 Identities=13% Similarity=0.062 Sum_probs=170.3
Q ss_pred ecceecccCceeEEEEEeC--CCC--EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 95 VGRQLGVGKESDIFEVARE--DGT--VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~--~g~--~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
+.+.||+|.||.|++|.+. +|+ .||||+++.+.... ... .+.+|+.+|.+|.|.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~----~md-----------------dflrEas~M~~L~H~h 172 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA----IMD-----------------DFLREASHMLKLQHPH 172 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch----hHH-----------------HHHHHHHHHHhccCcc
Confidence 4588999999999999883 454 59999998654221 011 3458999999999864
Q ss_pred CCcceeeec---CCceeEEeecCCCChhhhhccC--------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ--------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~--------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ -++++. ....+|||++++++|.+.+... ....++.||+.+|.||..+++|||||-..|||+.....
T Consensus 173 l--iRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprt 250 (1039)
T KOG0199|consen 173 L--IRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRT 250 (1039)
T ss_pred e--eEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccce
Confidence 2 333332 4567899999999987765431 11358899999999999999999999999999998888
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccc-ccccCCCCcchheeccCchhhhhhhccCCc--------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQ-ETTDGDDGSDIDTDEGSRLSFASISKTAGF-------- 310 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~-~~~~~~~~~~sDiySlG~~~f~~~t~~~~~-------- 310 (472)
|||+|||+++.+......+.+ ..--.-.|...++ -+....++.+||+|+||+++.|+.+.-...
T Consensus 251 VKI~DFGLmRaLg~ned~Yvm-------~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q 323 (1039)
T KOG0199|consen 251 VKICDFGLMRALGENEDMYVM-------APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ 323 (1039)
T ss_pred eeeecccceeccCCCCcceEe-------cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH
Confidence 999999999977543322211 1111123444333 346789999999999999999998842211
Q ss_pred ----chh--hhh-ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC-----CCcc-ccccccCCCCccchhhccccC
Q 012042 311 ----LDK--ELA-ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG-----NESE-TNETNVDGLDSLHLAEQDVIH 374 (472)
Q Consensus 311 ----l~~--~~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~ 374 (472)
+|. .+. ....+..+=+++..|...+|+|||+-...-+++ |..+ -..-|...-+-||+.--|++.
T Consensus 324 IL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp~~a~~~~d~~ep~aLh~~kgD~Iv 400 (1039)
T KOG0199|consen 324 ILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVARETYDSIEPGALHLTKGDEIV 400 (1039)
T ss_pred HHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCCceeeeeccccCCCceeeccCCeEE
Confidence 111 111 223444555888999999999999977664322 2211 011233345667777766643
No 403
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.79 E-value=2.2e-19 Score=168.34 Aligned_cols=177 Identities=18% Similarity=0.192 Sum_probs=123.1
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
+..||+|++|.|-+-++ .+|...|+|.++..-.+-. ..+..+|+.+..+. .++|
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~---------------------q~r~L~dldi~~r~----~~CP 105 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQE---------------------QKRLLMDLDIIMRT----VDCP 105 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHH---------------------HHHHHHhhhhhccC----CCCC
Confidence 46799999999999988 6899999998764322111 11233455554443 3456
Q ss_pred eeeec-------CCceeEEeecCCCChhhhh----c--cCChH----HHHHHHHHHHHHHHH-CCceeccCCCCcEEEcC
Q 012042 175 NAVDC-------NRHCVIMSLVQGYPLVQVN----Q--LQNPD----SVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 175 ~~i~~-------~~~~LVMEyi~G~~L~~l~----~--~~~~~----~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~ 236 (472)
..+.+ +..+|.||.+. .+|..+. . ...|+ .++..++.+|.+||+ ..+||||+||+||||+.
T Consensus 106 f~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~ 184 (282)
T KOG0984|consen 106 FTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY 184 (282)
T ss_pred eEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc
Confidence 65553 67899999886 3444331 1 12344 367788899999996 59999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc----ccCCCCcchheeccCchhhhhhhccC
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET----TDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~----~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
+|++||||||.+..+.+.-|... |..| ++| ++|+.. ....|+.+|||||||.+++|+.+.+.
T Consensus 185 ~GqVKiCDFGIsG~L~dSiAkt~---daGC------kpY-maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~ 250 (282)
T KOG0984|consen 185 DGQVKICDFGISGYLVDSIAKTM---DAGC------KPY-MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRF 250 (282)
T ss_pred CCcEEEcccccceeehhhhHHHH---hcCC------Ccc-CChhhcCcccCcccceeehhhhhhhhhhhhhhhccc
Confidence 99999999999987655433221 1111 122 233322 34589999999999999999998764
No 404
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.79 E-value=5.3e-20 Score=195.31 Aligned_cols=218 Identities=15% Similarity=0.225 Sum_probs=167.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcc-hhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRT-SFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~-sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|++...+|+|.+|.||+|++ .+++..|||+++.... .|. ..++|+-+++.+.|+
T Consensus 17 yellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~-----------------------~iqqei~~~~dc~h~- 72 (829)
T KOG0576|consen 17 YELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFS-----------------------GIQQEIGMLRDCRHP- 72 (829)
T ss_pred hhheeeecCCcccchhhhcccccCchhhheeeeccCCcccc-----------------------ccccceeeeecCCCc-
Confidence 45568899999999999999 5799999999876432 222 134688888888874
Q ss_pred CCcceeeec-------CCceeEEeecCCCChhhhhccCCh------HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 171 FPVPNAVDC-------NRHCVIMSLVQGYPLVQVNQLQNP------DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 171 i~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~~~~------~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++++ .+.++.||||.|+.|.+.-+...+ ..+++..+.++.|||..|=+|||||-.|||+++.
T Consensus 73 ----nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~ 148 (829)
T KOG0576|consen 73 ----NIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE 148 (829)
T ss_pred ----ChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc
Confidence 44442 678999999999999887543322 2367888999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
|.+++.|||.+..++.. +.--..|.+++|.++|++. ..+.+...||+|+.|.|..++-.-..+..+
T Consensus 149 gDvklaDfgvsaqitat---------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh 219 (829)
T KOG0576|consen 149 GDVKLADFGVSAQITAT---------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH 219 (829)
T ss_pred CceeecccCchhhhhhh---------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence 99999999998755422 2223457888999998875 357899999999999887554432111100
Q ss_pred ---------------hhh-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ---------------KEL-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ---------------~~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+ ....|+.-|.+.+.-++-.+|++||+++.++.
T Consensus 220 pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 220 PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred hHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 011 12458888999999999999999999999887
No 405
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.79 E-value=1.7e-18 Score=162.69 Aligned_cols=137 Identities=23% Similarity=0.314 Sum_probs=107.3
Q ss_pred eecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 98 QLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
.||+|+||.||+|.. +|..|+||+..... ++... . . .......+.+|+.++..+.+.++++|.++
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~--~~~~~--~---------~-~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 65 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKS--YRHPE--L---------D-ERIRRERTRNEARLLSRARKAGVNTPVVY 65 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCc--CcCch--H---------H-HHHHHHHHHHHHHHHHHHHHCCCCCCEEE
Confidence 379999999999974 57899999864321 10000 0 0 00112356789999999999989999987
Q ss_pred ec--CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceec
Q 012042 178 DC--NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251 (472)
Q Consensus 178 ~~--~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~ 251 (472)
.. +..+++|||++|.+|..++....+ .++.+++.+|.+||+.|++|||++|.|||++ ++.++++|||.+...
T Consensus 66 ~~~~~~~~lv~e~~~g~~l~~~~~~~~~-~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 66 DVDPDNKTIVMEYIEGKPLKDVIEEGND-ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEECCCCEEEEEEECCccHHHHHhhcHH-HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 65 556999999999999887643222 7899999999999999999999999999999 789999999998643
No 406
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=4.3e-20 Score=179.03 Aligned_cols=181 Identities=13% Similarity=0.144 Sum_probs=127.1
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC---
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF--- 171 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi--- 171 (472)
.++||-|+||.||.+++ .+|+.||+|.+.. -|..+ .+..+.-+|..+|..++|.++
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pn---vfq~L-----------------~s~krvFre~kmLcfFkHdNVLSa 117 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPN---VFQNL-----------------ASCKRVFREIKMLSSFRHDNVLSL 117 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcch---HHHHH-----------------HHHHHHHHHHHHHHhhccccHHHH
Confidence 48999999999999999 5899999997642 12211 112234578888888887652
Q ss_pred ---Ccceeee-cCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 ---PVPNAVD-CNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ---~vP~~i~-~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
-.|--++ +...|++.|++. .+|.+++-.. -..-++.||+++|.|||+.||.||||||.|+|++.+-.+|
T Consensus 118 LDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLK 196 (449)
T KOG0664|consen 118 LDILQPANPSFFQELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILK 196 (449)
T ss_pred HHhcCCCCchHHHHHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEE
Confidence 1122222 356788888875 3455543211 1234789999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhh
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t 305 (472)
|||||+|+..... +-.+++.-+-+.|+-.|+++ ....|+...||||.|+.+-+++-
T Consensus 197 ICDFGLARvee~d--------~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 197 ICDFGLARTWDQR--------DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred ecccccccccchh--------hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHh
Confidence 9999999854322 22222222334455567765 45889999999999988755554
No 407
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.77 E-value=3.7e-19 Score=192.96 Aligned_cols=219 Identities=16% Similarity=0.209 Sum_probs=153.7
Q ss_pred ceeeecceecccCce-eEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKES-DIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg-~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
..+.-.+++|.|..| .||+|.. +|+.||||.+-.+ | -..|++|+.+|+.-..+
T Consensus 509 ~~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~----------------------~~~A~rEi~lL~eSD~H 562 (903)
T KOG1027|consen 509 LFFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---F----------------------FDFAQREIQLLQESDEH 562 (903)
T ss_pred eeeccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---h----------------------HHHHHHHHHHHHhccCC
Confidence 344445788999876 4788876 5899999965321 1 12467999999887654
Q ss_pred CCCcceeeec-------CCceeEEeecCCCChhhhhcc----------CChHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 170 GFPVPNAVDC-------NRHCVIMSLVQGYPLVQVNQL----------QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 170 gi~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~----------~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
|+++.+ ...||+.|.|. .+|.++++. -++..++.|++.+|++||..+||||||||.||
T Consensus 563 ----~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNI 637 (903)
T KOG1027|consen 563 ----PNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNI 637 (903)
T ss_pred ----CceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceE
Confidence 777764 45789999985 566666543 24566899999999999999999999999999
Q ss_pred EEcC---CC--cEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhhc
Q 012042 233 MIDD---DE--KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 233 Ll~~---~g--~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
||.. ++ .++|.|||+++.+..... -+.| ..+ ..+..|. +|+++....-+...||+|+|+++|.-+++
T Consensus 638 LI~~~~~~~~~ra~iSDfglsKkl~~~~s--S~~r-~s~----~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltg 710 (903)
T KOG1027|consen 638 LISVPSADGTLRAKISDFGLSKKLAGGKS--SFSR-LSG----GSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTG 710 (903)
T ss_pred EEEccCCCcceeEEecccccccccCCCcc--hhhc-ccC----CCCcccccCHHHHhccccCcccchhhcCceEEEEecC
Confidence 9975 33 589999999997753221 1222 111 2234554 55555566667789999999999999887
Q ss_pred cCCcc----hh--hhhc---------cCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 307 TAGFL----DK--ELAA---------SGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 307 ~~~~l----~~--~~~~---------~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..++. ++ .|.. +--..+-.++|.+||.++|..||++.+-+-
T Consensus 711 G~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 711 GSHPFGDSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred CccCCCchHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 43322 11 1111 111114558999999999999999987654
No 408
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.77 E-value=5.5e-19 Score=190.21 Aligned_cols=220 Identities=14% Similarity=0.146 Sum_probs=150.8
Q ss_pred eecceecccCceeEEEEEeC-CC---CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DG---TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g---~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
.|.++||.|-||.||+|+.+ .| ..||||.++.+.+.- ..++ +..|+.+|.++.|+
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek----qrrd-----------------FL~EAsIMGQFdHP 690 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK----QRRD-----------------FLSEASIMGQFDHP 690 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHH----HHhh-----------------hhhhhhhcccCCCC
Confidence 56689999999999999984 23 469999998775432 2333 34699999999875
Q ss_pred CCCcce-eee-cCCceeEEeecCCCChhhhhccCC-------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 170 GFPVPN-AVD-CNRHCVIMSLVQGYPLVQVNQLQN-------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 170 gi~vP~-~i~-~~~~~LVMEyi~G~~L~~l~~~~~-------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+|..-. ++. ....+||.|||+++.|..++...+ .-.+++.|+.+|.||-+.|+|||||...||||+.+-..
T Consensus 691 NIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvC 770 (996)
T KOG0196|consen 691 NIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVC 770 (996)
T ss_pred cEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEE
Confidence 432211 111 145788999999999999875432 23588999999999999999999999999999999899
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccc--ccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch---h
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKR--FHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~--y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~ 313 (472)
||.|||+++.+.. |.....+-.+++ ... +|+......+|..|||||||+++.|-++ +..+-.+ +
T Consensus 771 KVsDFGLSRvled---------d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ 841 (996)
T KOG0196|consen 771 KVSDFGLSRVLED---------DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 841 (996)
T ss_pred Eeccccceeeccc---------CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH
Confidence 9999999986632 111111111111 112 2333356899999999999999977665 2111111 0
Q ss_pred ----------hhh-ccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 ----------ELA-ASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 ----------~~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.++ +.+....+-.++..|-+++-.+||.-.
T Consensus 842 dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~ 882 (996)
T KOG0196|consen 842 DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFA 882 (996)
T ss_pred HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHH
Confidence 111 234555666677777777777776543
No 409
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.77 E-value=1.2e-18 Score=183.80 Aligned_cols=220 Identities=15% Similarity=0.123 Sum_probs=156.1
Q ss_pred eecceecccCceeEEEEEeC---CCC--EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 94 AVGRQLGVGKESDIFEVARE---DGT--VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~---~g~--~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
.+++.||.|.||.||.|+.. .|+ .||||..+...+.-. ++.+..|.-+|+.+.|
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~---------------------tekflqEa~iMrnfdH 450 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD---------------------TEKFLQEASIMRNFDH 450 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh---------------------HHHHHHHHHHHHhCCC
Confidence 45689999999999999873 343 589998875433221 1234579999999988
Q ss_pred CCCCcceeee---cCCceeEEeecCCCChhhhhccC-C--h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ-N--P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~-~--~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
++| -+.++ ....|||||+++-+.|..+++.. . + ..++.||+.+|.|||+..+|||||-..||||....
T Consensus 451 phI--ikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~ 528 (974)
T KOG4257|consen 451 PHI--IKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ 528 (974)
T ss_pred cch--hheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc
Confidence 653 33333 37789999999999999887533 1 1 24788999999999999999999999999999888
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcc-ccccccccccccCCCCcchheeccCchhhhhhh-ccCCc------
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFR-KRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGF------ 310 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~-~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~------ 310 (472)
.|||.|||+++.+.... |. ...+ .+ +--.++|+......++..||||-||+-+.+.+. +..++
T Consensus 529 CVKLaDFGLSR~~ed~~---yY-----kaS~-~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs 599 (974)
T KOG4257|consen 529 CVKLADFGLSRYLEDDA---YY-----KASR-GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS 599 (974)
T ss_pred eeeecccchhhhccccc---hh-----hccc-cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc
Confidence 99999999998654210 00 0000 00 011245665567899999999999988876555 21111
Q ss_pred -----chh--hhh-ccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 311 -----LDK--ELA-ASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 311 -----l~~--~~~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
++. .++ +......+=-++-+|-+++|.+||.-.|.
T Consensus 600 DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 600 DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence 111 122 34566677788899999999999987654
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.76 E-value=5.8e-18 Score=162.01 Aligned_cols=212 Identities=16% Similarity=0.170 Sum_probs=137.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.++||+|+||.+|.|.. .+|..||||+-.....- . .+..|..+...|++ |
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----------------p--------qL~yEskvY~iL~~-g 70 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----------------P--------QLLYESKVYRILQG-G 70 (341)
T ss_pred ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----------------c--------chhHHHHHHHHhcc-C
Confidence 477889999999999999998 67999999986422110 0 12247777777765 4
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc---C
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID---D 236 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~---~ 236 (472)
+-+|.+..+ ...++||+++ |.+|.++...- ...-++.|++.-++|+|.+++|||||||+|.|+. .
T Consensus 71 ~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh 149 (341)
T KOG1163|consen 71 VGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRH 149 (341)
T ss_pred CCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccc
Confidence 556766554 4678999987 77887765321 1234788999999999999999999999999997 3
Q ss_pred CCcEEEEeCCCceecCcccch----hhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhcc-----
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQ----MYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKT----- 307 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~----~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~----- 307 (472)
..++.+||||+|+........ .--.+++....+|.+- .+. .+..-+-+-|.-|+|.++..+..+.
T Consensus 150 ~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASi----nAh--~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 150 CNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASI----NAH--LGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred cceEEEEeccchhhhccccccccCccccCCccceeeeehhh----hhh--hhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 467999999999865433221 1112333333333221 111 1111234557778887764433321
Q ss_pred ----------------CCcchhhhhccCCCHHHHHHHHHHHhcC
Q 012042 308 ----------------AGFLDKELAASGFTRKDQDVIQKFIGGS 335 (472)
Q Consensus 308 ----------------~~~l~~~~~~~~~s~~~~~~l~k~l~~~ 335 (472)
+-....+.++.||+.++.-.|.=+-..-
T Consensus 224 lka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~ 267 (341)
T KOG1163|consen 224 LKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLG 267 (341)
T ss_pred cchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcC
Confidence 1112335568889988876665554333
No 411
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=3.9e-19 Score=183.91 Aligned_cols=214 Identities=14% Similarity=0.161 Sum_probs=155.1
Q ss_pred cceecccCceeEEEEEeCC-CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVARED-GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~-g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
...||.|+||.|=++.... ...+|+|+++. +..+..++. .....|-.+|..+.+ |
T Consensus 425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK-----------~hIVdtkQq--------eHv~sEr~Im~~~~s-----~ 480 (732)
T KOG0614|consen 425 IATLGVGGFGRVELVKVNSQKATFALKILKK-----------KHIVDTKQQ--------EHVFSERNIMMECRS-----D 480 (732)
T ss_pred hhhcccCccceEEEEEecccchHHHHHHHhH-----------hhccchhHH--------HHHHhHHHHHHhcCc-----h
Confidence 3679999999999987743 33488887752 111111111 122346667766654 3
Q ss_pred eeee-------cCCceeEEeecCCCChhhhhccC----C--hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 175 NAVD-------CNRHCVIMSLVQGYPLVQVNQLQ----N--PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 175 ~~i~-------~~~~~LVMEyi~G~~L~~l~~~~----~--~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
.++. ....|++||-|-|+.|-.++... + ..-++.-+++++.|||++|||.|||||+|+|++.+|-+|
T Consensus 481 fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~K 560 (732)
T KOG0614|consen 481 FIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLK 560 (732)
T ss_pred HHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceE
Confidence 3332 25578999999999887765321 2 223666788999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc--hh------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--DK------ 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--~~------ 313 (472)
|.|||+|+.+.... -.-+|++++-+++|++....--+...|.|+||..+++++++.+++- +.
T Consensus 561 LVDFGFAKki~~g~----------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ 630 (732)
T KOG0614|consen 561 LVDFGFAKKIGSGR----------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL 630 (732)
T ss_pred EeehhhHHHhccCC----------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH
Confidence 99999998765332 2335778888888988777777889999999999999999876542 11
Q ss_pred ---hh----hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 ---EL----AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 ---~~----~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.+ .+..+++.-.++|.+++..+|.+|--..
T Consensus 631 ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~ 667 (732)
T KOG0614|consen 631 ILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQ 667 (732)
T ss_pred HHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccc
Confidence 11 1345666777999999999999995533
No 412
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.75 E-value=8.8e-19 Score=172.60 Aligned_cols=189 Identities=14% Similarity=0.135 Sum_probs=130.5
Q ss_pred eeeecceecccCceeEEEEEeC---C--CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE---D--GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~---~--g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
-|++.+.||+|.+|.||+|... + ...+|||.++.... .. + ....|.||+.+++.|
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~t------------------G-iS~SAcREiaL~REl 84 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GT------------------G-ISMSACREIALLREL 84 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CC------------------C-cCHHHHHHHHHHHHh
Confidence 3667788999999999999653 2 23688887653311 00 0 012466899999999
Q ss_pred hhCCCCcc-eee-e-cCCceeEEeecCCCChhhhhcc-------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 167 EDHGFPVP-NAV-D-CNRHCVIMSLVQGYPLVQVNQL-------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 167 ~~~gi~vP-~~i-~-~~~~~LVMEyi~G~~L~~l~~~-------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
+|+++..- +++ . -...++++||.+ .+|.+++.. ..| ..++.||+.++.|||++=|+||||||.||
T Consensus 85 ~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNI 163 (438)
T KOG0666|consen 85 KHPNVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANI 163 (438)
T ss_pred cCCcchhHHHHHhccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceE
Confidence 98663221 111 1 145789999987 455554321 112 35899999999999999999999999999
Q ss_pred EEcCC----CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhcc
Q 012042 233 MIDDD----EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 233 Ll~~~----g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~ 307 (472)
||..+ |.|||.|||+|+...+|...-+ .-|-. +.++ ++-+|+-+ ....||...|+|+.||++-|++|-.
T Consensus 164 lvmgdgperG~VKIaDlGlaR~~~~plkpl~-s~d~V-VVTi----WYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~ 237 (438)
T KOG0666|consen 164 LVMGDGPERGRVKIADLGLARLFNNPLKPLA-SLDPV-VVTI----WYRAPELLLGARHYTKAIDVWAIGCIFAELLTLE 237 (438)
T ss_pred EEeccCCccCeeEeecccHHHHhhccccccc-cCCce-EEEE----EecChHHhcccccccchhhhHHHHHHHHHHHccC
Confidence 99877 8999999999998877643221 11211 2121 12234433 4588999999999999998888853
No 413
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=2.4e-19 Score=172.34 Aligned_cols=247 Identities=15% Similarity=0.200 Sum_probs=156.2
Q ss_pred ecceecccCceeEEEEEe-CCCCEEEEEEee--cCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 95 VGRQLGVGKESDIFEVAR-EDGTVLAMKLHR--LGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r--~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
-...||+|.||.||+|+. .+|+.||+|..- .....| .+.+.+|+.+|..|.|.++
T Consensus 21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGf----------------------pitalreikiL~~lkHenv 78 (376)
T KOG0669|consen 21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGF----------------------PITALREIKILQLLKHENV 78 (376)
T ss_pred HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCC----------------------cHHHHHHHHHHHHhcchhH
Confidence 346799999999999998 468889998531 111111 1246689999999988652
Q ss_pred Ccceeee------------cCCceeEEeecCCCChhhhhcc-------CChHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 172 PVPNAVD------------CNRHCVIMSLVQGYPLVQVNQL-------QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 172 ~vP~~i~------------~~~~~LVMEyi~G~~L~~l~~~-------~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
.+++. -...|+||.+|+- +|.-++.. .....++..++.+|.|+|+..|+|||+||.|+
T Consensus 79 --~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNv 155 (376)
T KOG0669|consen 79 --VNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANV 155 (376)
T ss_pred --HHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhE
Confidence 22222 1348999999973 33333221 12346899999999999999999999999999
Q ss_pred EEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-ccccc-ccCCCCcchheeccCchhhhhhhccC--
Q 012042 233 MIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQET-TDGDDGSDIDTDEGSRLSFASISKTA-- 308 (472)
Q Consensus 233 Ll~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~-- 308 (472)
||+.+|.++|+|||+++.++.+.-. .-.| ...+.+. ..| +|+-. ....++...|+|.-|+++-++-|+.+
T Consensus 156 LIt~dgilklADFGlar~fs~~~n~-~kpr---ytnrvvT--LwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspim 229 (376)
T KOG0669|consen 156 LITKDGILKLADFGLARAFSTSKNV-VKPR---YTNRVVT--LWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIM 229 (376)
T ss_pred EEcCCceEEeeccccccceeccccc-CCCC---cccceee--eecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccc
Confidence 9999999999999999755422110 0001 0011111 223 33322 46889999999999988755555321
Q ss_pred ----------------C--------cch-----hhh--h---------------ccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 309 ----------------G--------FLD-----KEL--A---------------ASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 309 ----------------~--------~l~-----~~~--~---------------~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
+ ..+ ..+ . +-+-..+-.++|++|+..+|.+|+.+
T Consensus 230 qgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a 309 (376)
T KOG0669|consen 230 QGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA 309 (376)
T ss_pred cCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcch
Confidence 0 000 000 0 00111133478999999999999999
Q ss_pred CCCCCCCCCcc--ccccccCCCCccchhhccc
Q 012042 343 DEGSDDGNESE--TNETNVDGLDSLHLAEQDV 372 (472)
Q Consensus 343 ~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 372 (472)
++-+..+=+-- .--++..++-|-|+..+-|
T Consensus 310 d~alnh~~F~kdp~pqanl~~ml~t~~~s~fe 341 (376)
T KOG0669|consen 310 DQALNHDFFWKDPMPQANLQDMLSTHLQSMFE 341 (376)
T ss_pred HhhhchhhhhcCCcchhhHHHHHHHhHHHHHH
Confidence 88776552210 1113444455555555544
No 414
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.74 E-value=3.9e-18 Score=179.54 Aligned_cols=215 Identities=16% Similarity=0.128 Sum_probs=155.5
Q ss_pred eecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.+..+||-|.+|.||.|+++ -.-.||||.++..+.... .+.+|+.+|+.++|+++
T Consensus 270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeve-----------------------EFLkEAAvMKeikHpNL- 325 (1157)
T KOG4278|consen 270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-----------------------EFLKEAAVMKEIKHPNL- 325 (1157)
T ss_pred eeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHH-----------------------HHHHHHHHHHhhcCccH-
Confidence 34589999999999999995 467899998875443221 34579999999988542
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccCCh--------HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQNP--------DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~~--------~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..+++. -..||+.|||..+.|.+++...+. ..++.||..+|.||...++|||||-..|.||.++..|
T Consensus 326 -VqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiV 404 (1157)
T KOG4278|consen 326 -VQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIV 404 (1157)
T ss_pred -HHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceE
Confidence 222222 457999999999998887643221 1367799999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccc---cccccccCCCCcchheeccCchhhhhhhccC---Ccchh-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL---NFQETTDGDDGSDIDTDEGSRLSFASISKTA---GFLDK- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~---~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~---~~l~~- 313 (472)
||+|||+++.++. |... ...+.+|-+ .|+-+....++.+||||.||+.+.+..|-.. +-++.
T Consensus 405 KvADFGLsRlMtg---------DTYT--AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS 473 (1157)
T KOG4278|consen 405 KVADFGLSRLMTG---------DTYT--AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 473 (1157)
T ss_pred EeeccchhhhhcC---------Ccee--cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH
Confidence 9999999985532 2111 112223322 3444456778999999999999988777321 11221
Q ss_pred ---hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 314 ---EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 314 ---~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.+ .+.|...+.=+++..|..-.|.+||+-.|
T Consensus 474 qVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFae 515 (1157)
T KOG4278|consen 474 QVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAE 515 (1157)
T ss_pred HHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHH
Confidence 11 24577788889999999999999987544
No 415
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.73 E-value=7.4e-18 Score=163.58 Aligned_cols=210 Identities=18% Similarity=0.228 Sum_probs=140.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.|.+.||+|-||.+-+|.+ .+...+|+|.+....+..+ .+.+|+..--.|.++
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~-----------------------dF~rEfhY~~~Ls~H- 80 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQA-----------------------DFVREFHYSFFLSPH- 80 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHH-----------------------HHHHHhccceeeccc-
Confidence 366778999999999999999 5788999998754333222 234566554444332
Q ss_pred CCcceeee--------cCCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc--
Q 012042 171 FPVPNAVD--------CNRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-- 235 (472)
Q Consensus 171 i~vP~~i~--------~~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-- 235 (472)
-.++. .+..+++|||++-++|..-+... ....++.|++.+|.|||+.++||||||.+||||-
T Consensus 81 ---~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~ 157 (378)
T KOG1345|consen 81 ---QHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA 157 (378)
T ss_pred ---hhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC
Confidence 12222 25677899999999998765322 2345899999999999999999999999999995
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccc--cc--ccCCCCcchheeccCchhhhhhhccCCc-
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQ--ET--TDGDDGSDIDTDEGSRLSFASISKTAGF- 310 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~--~~--~~~~~~~~sDiySlG~~~f~~~t~~~~~- 310 (472)
+.-+|||||||.....+.. ..+ ...+. .|..++. +. ..-.....+|+|-||.++|.-+|+..+-
T Consensus 158 df~rvKlcDFG~t~k~g~t--V~~----~~~~~-----~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 158 DFYRVKLCDFGLTRKVGTT--VKY----LEYVN-----NYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred CccEEEeeecccccccCce--ehh----hhhhc-----ccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 3457999999998754311 000 01111 1221111 01 1234566799999999999999975321
Q ss_pred ----ch-----hh-----h------hccCCCHHHHHHHHHHHhcCcccC
Q 012042 311 ----LD-----KE-----L------AASGFTRKDQDVIQKFIGGSIEES 339 (472)
Q Consensus 311 ----l~-----~~-----~------~~~~~s~~~~~~l~k~l~~~p~~R 339 (472)
.+ +. . .-..|+.+......+.+.+.+++|
T Consensus 227 ka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 227 KASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred hhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 01 00 0 012378888888888899998887
No 416
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.73 E-value=2.8e-18 Score=169.63 Aligned_cols=179 Identities=17% Similarity=0.205 Sum_probs=130.2
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC-Cc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF-PV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi-~v 173 (472)
..++|.|.- .|..|.+ -.+++||+|..-.. |.. ..+| .+|.+|..++..+.|.++ ..
T Consensus 22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p---f~n------------~~~a-----kra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP---FQN------------QTHA-----KRAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred ecccCCCCc-eEEecchhhccCceehhhhcCc---ccc------------Cccc-----hhhhhhhhhhhhhcccceeee
Confidence 578889987 6777777 46899999965321 211 1111 246789999999988652 11
Q ss_pred ceeee-------cCCceeEEeecCCCChhhhhccC----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 174 PNAVD-------CNRHCVIMSLVQGYPLVQVNQLQ----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 174 P~~i~-------~~~~~LVMEyi~G~~L~~l~~~~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
-+.+. ....|+||||+.+ +|.+.+... ....++.|++.++.+||+.||+||||||+||++..++.+||
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi 159 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKI 159 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheee
Confidence 11111 2568999999974 455543322 23468999999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
.|||.|+.-. + | -..+.|...+|+-.|+...+..+....||||.|+.+-+++++
T Consensus 160 ~dfg~ar~e~-~--------~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~ 213 (369)
T KOG0665|consen 160 LDFGLARTED-T--------D-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILG 213 (369)
T ss_pred ccchhhcccC-c--------c-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhc
Confidence 9999997432 1 1 123456667777778877676699999999999998777764
No 417
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.73 E-value=5.2e-17 Score=175.07 Aligned_cols=211 Identities=15% Similarity=0.221 Sum_probs=137.4
Q ss_pred HHHHhh---CCCCCCCCHHHHHHHhCCCCc---hhHHHHHHHHhcccccccCCCccCcccccccccHHHHHHHHhCCcee
Q 012042 20 TAVEMG---MRNHEIVPSELVHRIASLKHG---GTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKTLVNRGVFT 93 (472)
Q Consensus 20 ~~ie~~---~~~~e~Vp~~~i~~~a~l~~~---~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~al~~l~~~~~i~ 93 (472)
++|..| +.+.+++|.++++++++|.+. .....+...+...|-.... .++.. +
T Consensus 65 ~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~-------------------~~F~~---f 122 (537)
T PRK04750 65 IFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVE-------------------EWFDD---F 122 (537)
T ss_pred HHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHH-------------------HHHHh---c
Confidence 355555 789999999999999999876 2244455555443321111 11111 1
Q ss_pred eecceecccCceeEEEEEeCC-CCEEEEEEeecCcchh-----HHhhhhhHHhh----hccchhhHH---------HhHH
Q 012042 94 AVGRQLGVGKESDIFEVARED-GTVLAMKLHRLGRTSF-----RAVKSKRDYLR----HRNSYNWLY---------LSRL 154 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~-g~~VAVKi~r~~~~sf-----~~~k~~r~yl~----~~~~~~~~~---------~~r~ 154 (472)
+. .+||+|++|+||+|+..+ |+.||||+.+++.... ..++....++. ...+..... ....
T Consensus 123 d~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~El 201 (537)
T PRK04750 123 DI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDEL 201 (537)
T ss_pred Ch-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhh
Confidence 12 689999999999999976 9999999998764211 11111111111 111111110 1123
Q ss_pred HHHHHHHHHHHhhh-----CCCCcceeee--cCCceeEEeecCCCChhhhhc---c-CChHHHHHHHHH-HHHHHHHCCc
Q 012042 155 AALKEFAFMKALED-----HGFPVPNAVD--CNRHCVIMSLVQGYPLVQVNQ---L-QNPDSVFETIIG-LVVRLAEHGL 222 (472)
Q Consensus 155 ~a~rE~~~L~~L~~-----~gi~vP~~i~--~~~~~LVMEyi~G~~L~~l~~---~-~~~~~i~~qIl~-aL~~LH~~GI 222 (472)
.+.+|..++.++.. ..+.+|.++. ++..+||||||+|.++.++.. . .+...+....+. .+..++..|+
T Consensus 202 D~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~Gf 281 (537)
T PRK04750 202 DLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGF 281 (537)
T ss_pred CHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCe
Confidence 45678888888763 2377898886 478999999999999977421 1 133344444333 3455678999
Q ss_pred eeccCCCCcEEEcCCC----cEEEEeCCCceecCc
Q 012042 223 IHCDFNEFNIMIDDDE----KVTMIDFPQMVSVSH 253 (472)
Q Consensus 223 IHrDLKP~NILl~~~g----~vkIIDFG~A~~~~~ 253 (472)
+|+|+||+||+++.+| +++++|||++..++.
T Consensus 282 fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 282 FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred eeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 9999999999999887 899999999988753
No 418
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.72 E-value=9.4e-18 Score=181.43 Aligned_cols=184 Identities=14% Similarity=0.118 Sum_probs=130.1
Q ss_pred eeeecceecccCceeEEEEEe-CCC----CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDG----TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g----~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
.....++||+|+||.||+|.+ +.| -+||||++..... . + +...+..|+-+|.+|
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~---~-----------------~s~e~LdeAl~masl 755 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-P---K-----------------ASIELLDEALRMASL 755 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-c---h-----------------hhHHHHHHHHHHhcC
Confidence 334468999999999999998 555 4799998863221 1 1 012345688889999
Q ss_pred hhCCCCcceeeec---CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 167 EDHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 167 ~~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
.|++ +-+++++ ....||.+|++++.|.++.... . ...+..||+.+|.|||.+++|||||-..|+||..
T Consensus 756 dHpn--l~RLLgvc~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks 833 (1177)
T KOG1025|consen 756 DHPN--LLRLLGVCMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS 833 (1177)
T ss_pred CCch--HHHHhhhcccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC
Confidence 8754 2334443 4578899999999998875432 1 1248899999999999999999999999999998
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
-..+||.|||+|+.+. |.+.+|...-......+ +..+......++.+||||||||++.|.+|
T Consensus 834 P~hvkitdfgla~ll~-~d~~ey~~~~gK~pikw------male~i~~~~~thqSDVWsfGVtiWElmT 895 (1177)
T KOG1025|consen 834 PNHVKITDFGLAKLLA-PDEKEYSAPGGKVPIKW------MALESIRIRKYTHQSDVWSFGVTIWELMT 895 (1177)
T ss_pred CCeEEEEecchhhccC-cccccccccccccCcHH------HHHHHhhccCCCchhhhhhhhhhHHHHHh
Confidence 8899999999998553 22322221111110000 11111245789999999999999999998
No 419
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.72 E-value=5.5e-17 Score=178.54 Aligned_cols=223 Identities=16% Similarity=0.137 Sum_probs=156.1
Q ss_pred eecceecccCceeEEEEEeC----C----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 94 AVGRQLGVGKESDIFEVARE----D----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~----~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
.+++.||+|.||.|++|... . ...||||..+..... .. ...+..|+.+|+.
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~--------------------~~~~~~El~~m~~ 357 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SE--------------------KKDLMSELNVLKE 357 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HH--------------------HHHHHHHHHHHHH
Confidence 45679999999999999752 1 346999987654433 11 1245679999999
Q ss_pred hhhCCCCcceeee-------cCCceeEEeecCCCChhhhhccCC----------------------hHHHHHHHHHHHHH
Q 012042 166 LEDHGFPVPNAVD-------CNRHCVIMSLVQGYPLVQVNQLQN----------------------PDSVFETIIGLVVR 216 (472)
Q Consensus 166 L~~~gi~vP~~i~-------~~~~~LVMEyi~G~~L~~l~~~~~----------------------~~~i~~qIl~aL~~ 216 (472)
+.++ |+++. .+..++|+||+..+.|..++.... .-.+..||+.+++|
T Consensus 358 ~g~H----~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~ 433 (609)
T KOG0200|consen 358 LGKH----PNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEY 433 (609)
T ss_pred hcCC----cchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 9754 44333 256899999999999887653211 11377899999999
Q ss_pred HHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheecc
Q 012042 217 LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 217 LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySl 296 (472)
|++.++|||||-..||||..+..+||+|||+|+...+... +..+ ....+ . +-..++|+-+....++.+||||||
T Consensus 434 L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~--y~~~--~~~~~-L-P~kWmApEsl~~~~ft~kSDVWSf 507 (609)
T KOG0200|consen 434 LASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDY--YRTK--SSAGT-L-PVKWMAPESLFDRVFTSKSDVWSF 507 (609)
T ss_pred HhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCc--eEec--CCCCc-c-ceeecCHHHhccCcccccchhhHH
Confidence 9999999999999999999998999999999985433211 1100 00000 0 111345555556789999999999
Q ss_pred Cchhhhhhhcc-CCcch----h----------h-hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 297 SRLSFASISKT-AGFLD----K----------E-LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 297 G~~~f~~~t~~-~~~l~----~----------~-~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|+.+++..+-. .+-.. . . -.+..-+.++=+++..|...+|++||+-.+..+
T Consensus 508 GI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 508 GILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 99888877721 11110 0 1 112334777778899999999999999887755
No 420
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.72 E-value=1.3e-17 Score=174.84 Aligned_cols=185 Identities=17% Similarity=0.256 Sum_probs=132.8
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|....++|.|+||.|+.|.++ +...|+||.+...+ -...-|++.+.-.. .--|+.+|..|+.+
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeR------IL~DtWvrDrkLGt--------Vp~EIqIla~l~~~-- 626 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKER------ILVDTWVRDRKLGT--------VPSEIQILATLNKH-- 626 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhh------hhhhhhhcccccCc--------cchhHHHHHHhhhc--
Confidence 556789999999999999994 56779999874221 01122333322111 22599999999843
Q ss_pred Ccceee---ec----CCceeEEeec-CCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAV---DC----NRHCVIMSLV-QGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i---~~----~~~~LVMEyi-~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
.+|+++ ++ +..||+||-= +|.+|.++++.. ....+|.|++.++++||+.||||||||-+|++++.+
T Consensus 627 sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 627 SHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN 706 (772)
T ss_pred CccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecC
Confidence 234443 32 6688999854 477888887543 233599999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecC-cccchhhhccccchhhhhccccccccccccc--cCCCCcchheeccCchhhhhhhc
Q 012042 238 EKVTMIDFPQMVSVS-HQNAQMYFDRDVECIFKFFRKRFHLNFQETT--DGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 238 g~vkIIDFG~A~~~~-~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~--~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
|-++|||||.|.... .| ...|.++.+|++++.. ....+..-|||++|+.+|..+-+
T Consensus 707 g~~klidfgsaa~~ksgp-------------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyk 765 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKSGP-------------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYK 765 (772)
T ss_pred CeEEEeeccchhhhcCCC-------------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEec
Confidence 999999999986543 22 2235566777666553 35567789999999988876544
No 421
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.71 E-value=2.3e-17 Score=170.05 Aligned_cols=216 Identities=13% Similarity=0.133 Sum_probs=141.4
Q ss_pred ecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 95 VGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
+.+.||+|.||.||+|... ++.||||++.... +. +| +.|-.+..-. +..++
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~--------kq---------s~--------~~Ek~Iy~lp---~m~h~ 264 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE--------KQ---------SF--------QNEKNIYSLP---GMKHE 264 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCHHH--------HH---------HH--------HhHHHHHhcc---Cccch
Confidence 3477999999999999874 5899999986321 11 12 1233332211 22234
Q ss_pred eeeec-----------CCceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHHH---------CCceeccCCC
Q 012042 175 NAVDC-----------NRHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLAE---------HGLIHCDFNE 229 (472)
Q Consensus 175 ~~i~~-----------~~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH~---------~GIIHrDLKP 229 (472)
+++.+ -..+||++|-+.++|.+++... ....++..++++|+|||+ .+|+|||||.
T Consensus 265 nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkS 344 (534)
T KOG3653|consen 265 NILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKS 344 (534)
T ss_pred hHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccc
Confidence 43332 3578999999999999987543 123588899999999984 4699999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCC-------cchheeccCchhhh
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDG-------SDIDTDEGSRLSFA 302 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~-------~~sDiySlG~~~f~ 302 (472)
.||||..|+...|+|||+|..+...... .|..+ -++++-+++|+.+ .+... .+.||||+|-++.|
T Consensus 345 kNVLvK~DlTccIaDFGLAl~~~p~~~~----~d~~~---qVGT~RYMAPEvL-Egainl~d~~Afkr~DvYamgLVLWE 416 (534)
T KOG3653|consen 345 KNVLVKNDLTCCIADFGLALRLEPGKPQ----GDTHG---QVGTRRYMAPEVL-EGAINLQDRDAFKRIDVYAMGLVLWE 416 (534)
T ss_pred cceEEccCCcEEeeccceeEEecCCCCC----cchhh---hhhhhhhcCHHHH-hhhcccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999877522111 11111 2333334555543 33333 45999999988888
Q ss_pred hhhccCCc---------------------chh--h---------hhcc-----CCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 303 SISKTAGF---------------------LDK--E---------LAAS-----GFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 303 ~~t~~~~~---------------------l~~--~---------~~~~-----~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+++.... ++. . ...+ .-..-+.+.|+.|-+.+++-|-|+..-
T Consensus 417 i~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 417 IASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred HHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 77643211 010 0 0001 122335689999999999999888765
Q ss_pred CC
Q 012042 346 SD 347 (472)
Q Consensus 346 ~~ 347 (472)
.|
T Consensus 497 ~e 498 (534)
T KOG3653|consen 497 EE 498 (534)
T ss_pred HH
Confidence 44
No 422
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=1.8e-17 Score=169.79 Aligned_cols=178 Identities=11% Similarity=0.134 Sum_probs=121.9
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH--HHhhhCCC
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM--KALEDHGF 171 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L--~~L~~~gi 171 (472)
.+.+.||+|.||.||+|.+. |+.||||++.... -.+|. +|.++. .-|+|.+|
T Consensus 214 ~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd-----------------E~SWf--------rEtEIYqTvmLRHENI 267 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD-----------------ERSWF--------RETEIYQTVMLRHENI 267 (513)
T ss_pred EEEEEecCccccceeecccc-CCceEEEEecccc-----------------hhhhh--------hHHHHHHHHHhccchh
Confidence 34699999999999999885 8899999985211 11232 344443 34565432
Q ss_pred Ccceeeec--------CCceeEEeecCCCChhhhhccC--ChH---HHHHHHHHHHHHHHH--------CCceeccCCCC
Q 012042 172 PVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ--NPD---SVFETIIGLVVRLAE--------HGLIHCDFNEF 230 (472)
Q Consensus 172 ~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~--~~~---~i~~qIl~aL~~LH~--------~GIIHrDLKP~ 230 (472)
-..|+. ...+||.+|-+.++|.+++... ... .++..++.+|++||- -.|.|||||..
T Consensus 268 --LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSK 345 (513)
T KOG2052|consen 268 --LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSK 345 (513)
T ss_pred --hhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccc
Confidence 223321 4589999999999999987654 222 477788999999993 35999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-------CCcchheeccCchhhhh
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-------DGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-------~~~~sDiySlG~~~f~~ 303 (472)
||||..+|...|+|+|+|+...+ ....+ |+.+-.+ ++++-+++|+.+ .+. --...||||||.++.|.
T Consensus 346 NILVKkn~~C~IADLGLAv~h~~--~t~~i--di~~N~r-VGTKRYMAPEvL-detin~~~Fesyk~ADIYafgLVlWEi 419 (513)
T KOG2052|consen 346 NILVKKNGTCCIADLGLAVRHDS--DTDTI--DIPPNPR-VGTKRYMAPEVL-DETINMKHFESYKRADIYAFGLVLWEI 419 (513)
T ss_pred cEEEccCCcEEEeeceeeEEecc--cCCcc--cCCCCCc-cceeeccChHHh-hhhcChhhhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999986543 22222 4443333 333334555543 222 22468999999887665
Q ss_pred hh
Q 012042 304 IS 305 (472)
Q Consensus 304 ~t 305 (472)
..
T Consensus 420 ar 421 (513)
T KOG2052|consen 420 AR 421 (513)
T ss_pred HH
Confidence 43
No 423
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=1.1e-16 Score=173.71 Aligned_cols=139 Identities=19% Similarity=0.279 Sum_probs=105.7
Q ss_pred ecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 95 VGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
..+.||+|+||.||+|... +..+++|+........... . ......++.+|+.+|.++.++++.+|
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~-~~~~v~k~~~~~~~~~~~~---~-----------~~~~~~~~~~E~~~l~~l~~~~i~~p 401 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYL-GRDAVIKERVPKGYRHPEL---D-----------ERLRTERTRAEARLLSEARRAGVPTP 401 (535)
T ss_pred ccceeccCCcEEEEEEeec-CccceeEEEecccccchhH---H-----------HHHHHHHHHHHHHHHHhhcccCCCee
Confidence 4688999999999999874 3445556432111000000 0 01122356789999999999988888
Q ss_pred eeeec--CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceec
Q 012042 175 NAVDC--NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251 (472)
Q Consensus 175 ~~i~~--~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~ 251 (472)
..+.. ...++||||++|++|.+.+. ....++.+++.+|.+||+.||+||||||.|||+ .++.++|+|||++...
T Consensus 402 ~~~~~~~~~~~lv~E~~~g~~L~~~l~--~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 402 VIYDVDPEEKTIVMEYIGGKDLKDVLE--GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEEeCCCCEEEEEecCCCcHHHHHH--HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 76654 47899999999999988764 345689999999999999999999999999999 5778999999999754
No 424
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=3.6e-16 Score=145.43 Aligned_cols=138 Identities=21% Similarity=0.286 Sum_probs=108.2
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..+++|+++.||.+.. -|.++++|. |+.+ .++. ..--..+.+.+..+|+++|.+++..|+++|.+
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~-Ri~K-~YR~------------p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v 66 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKE-RIPK-RYRH------------PELDEKLRRERTRREARILAKAREAGVPVPIV 66 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEe-ecCc-ccCC------------hHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeE
Confidence 3578999999999955 356688885 3221 1110 00111245567889999999999999999999
Q ss_pred eec--CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceec
Q 012042 177 VDC--NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251 (472)
Q Consensus 177 i~~--~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~ 251 (472)
+++ +...|+||||+|..|.+.+... ...++..+-..+..||..|||||||.+.||++..+ .+++||||++...
T Consensus 67 ~dvD~~~~~I~me~I~G~~lkd~l~~~-~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~s 141 (204)
T COG3642 67 YDVDPDNGLIVMEYIEGELLKDALEEA-RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEFS 141 (204)
T ss_pred EEEcCCCCEEEEEEeCChhHHHHHHhc-chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCccccc
Confidence 887 5566999999999999877543 46799999999999999999999999999999854 5999999999643
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.67 E-value=4.2e-16 Score=158.54 Aligned_cols=191 Identities=17% Similarity=0.200 Sum_probs=131.5
Q ss_pred eeeecceecccCceeEEEEEeCC--CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh-
Q 012042 92 FTAVGRQLGVGKESDIFEVARED--GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED- 168 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~--g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~- 168 (472)
-|.+...||+|+||.||.|.+.. ...+|+|+-......... .+..|..+|..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~----------------------~l~~E~~vl~~l~~~ 76 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS----------------------VLKIEIQVLKKLEKK 76 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc----------------------cchhHHHHHHHHhhh
Confidence 47889999999999999999854 357999986532111100 12358888888874
Q ss_pred -CCCCcceeeecC-----CceeEEeecCCCChhhhhccC--------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 169 -HGFPVPNAVDCN-----RHCVIMSLVQGYPLVQVNQLQ--------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 169 -~gi~vP~~i~~~-----~~~LVMEyi~G~~L~~l~~~~--------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
....+|.+++.+ ..++||+.+ |.+|.++.... ....++.|++.+|.+||+.|+|||||||.|+++
T Consensus 77 ~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~ 155 (322)
T KOG1164|consen 77 NGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVV 155 (322)
T ss_pred cCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeee
Confidence 223468877654 479999987 78888765211 223588899999999999999999999999999
Q ss_pred cCC-----CcEEEEeCCCce--ecCcccchhhhccccchhhhhccccccccccc-cccCCCCcchheeccCchhhhhhhc
Q 012042 235 DDD-----EKVTMIDFPQMV--SVSHQNAQMYFDRDVECIFKFFRKRFHLNFQE-TTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 235 ~~~-----g~vkIIDFG~A~--~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~-~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
... ..++|+|||+|+ ......... + +-.......|.++..|.+.. ..+...+.+-|+||++..+.++..+
T Consensus 156 g~~~~~~~~~~~llDfGlar~~~~~~~~~~~-~-~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g 233 (322)
T KOG1164|consen 156 GQSSRSEVRTLYLLDFGLARRFKYVGDSGGN-L-RPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKG 233 (322)
T ss_pred cCCCCcccceEEEEecCCCccccccCCCCcc-c-ccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcC
Confidence 854 358999999998 332221111 0 01111112344444554433 2567788999999999999888876
Q ss_pred c
Q 012042 307 T 307 (472)
Q Consensus 307 ~ 307 (472)
.
T Consensus 234 ~ 234 (322)
T KOG1164|consen 234 S 234 (322)
T ss_pred C
Confidence 3
No 426
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.67 E-value=6.9e-17 Score=182.85 Aligned_cols=167 Identities=11% Similarity=0.037 Sum_probs=108.8
Q ss_pred CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecC
Q 012042 180 NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVS 252 (472)
Q Consensus 180 ~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~ 252 (472)
...+++|||+ +.+|.+++... . ...++.||+.+|.|||++|||||||||.||||+..|.++++|||.+....
T Consensus 53 ~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~ 131 (793)
T PLN00181 53 DSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131 (793)
T ss_pred chhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence 4567788987 55888877421 1 12488999999999999999999999999999766666666666553321
Q ss_pred cccchhhhcccc--------------c------------hhhhhccccccccccccccCCCCcchheeccCchhhhhhhc
Q 012042 253 HQNAQMYFDRDV--------------E------------CIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 253 ~p~a~~~l~rD~--------------~------------~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
..........|. . ....+.+..++++|+......++.++||||||+++|+++++
T Consensus 132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 100000000000 0 00012334456677766678899999999999999999986
Q ss_pred cCCcchh---------hhhccC---CCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 307 TAGFLDK---------ELAASG---FTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 307 ~~~~l~~---------~~~~~~---~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+.... ...... -..+...++.+||.++|.+||++.+-..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 212 VSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 5332110 001111 1334567888899999999999998654
No 427
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.66 E-value=1.1e-15 Score=152.19 Aligned_cols=220 Identities=15% Similarity=0.163 Sum_probs=147.9
Q ss_pred CceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 90 GVFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.-|.||++||.|+||.++.|.. -++++||||+-..... .- .+.-|++..+.|..
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-AP-----------------------QLrdEYr~YKlL~g 82 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-AP-----------------------QLRDEYRTYKLLGG 82 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC-cc-----------------------hHHHHHHHHHHHcC
Confidence 55689999999999999999988 6899999997532111 10 13358888877764
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.-+|.++.+ -.++||||++ |.+|.++.+.- ....++.|++.-|+++|++.+|.|||||+|+||...
T Consensus 83 -~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp 160 (449)
T KOG1165|consen 83 -TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRP 160 (449)
T ss_pred -CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCC
Confidence 3446888776 3478999988 67777765321 233588999999999999999999999999999733
Q ss_pred -----CcEEEEeCCCceecCcccchh-hhccccch---hhhhccccccccccccccCCCCcchheeccCchhhhhhhccC
Q 012042 238 -----EKVTMIDFPQMVSVSHQNAQM-YFDRDVEC---IFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 238 -----g~vkIIDFG~A~~~~~p~a~~-~l~rD~~~---i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
..|.|||||+|+....|.... +-.|.-.. ..+|+. .-...+..-+-+-|.-++|-+++.++.+.-
T Consensus 161 ~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMS------INTHlGrEQSRRDDLEaLGHvFmYFLRGsL 234 (449)
T KOG1165|consen 161 GTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMS------INTHLGREQSRRDDLEALGHVFMYFLRGSL 234 (449)
T ss_pred CCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeE------eeccccchhhhhhhHHHhhhhhhhhccCCC
Confidence 348999999999877665432 11122222 222222 111123334556688889988877776421
Q ss_pred -------C--------------cchhhhhccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 309 -------G--------------FLDKELAASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 309 -------~--------------~l~~~~~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
+ ......++.||..+|..-|.=.-..+.++-|+
T Consensus 235 PWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PD 288 (449)
T KOG1165|consen 235 PWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPD 288 (449)
T ss_pred ccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCC
Confidence 0 11224567889988887766554444444443
No 428
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.65 E-value=1.5e-16 Score=162.15 Aligned_cols=193 Identities=12% Similarity=0.183 Sum_probs=128.9
Q ss_pred ceeeecceecccCceeEEEEEe-C---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-E---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
..|.+.++||+|.|+.||+|.+ . ..+.||+|.+...... .+...|+++|..+
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p------------------------~ri~~El~~L~~~ 91 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP------------------------SRILNELEMLYRL 91 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc------------------------hHHHHHHHHHHHh
Confidence 3466779999999999999988 3 4678999977533211 1245799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhcc---CChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-CCC
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDE 238 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-~~g 238 (472)
....- +-+...+ +..++||+|++-....++... .....++..++.+|.++|..||||||+||.|+|.+ ..+
T Consensus 92 gG~~n-i~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~ 170 (418)
T KOG1167|consen 92 GGSDN-IIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQ 170 (418)
T ss_pred ccchh-hhcchhhhccCCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccC
Confidence 76532 2222222 567899999998776665422 23346899999999999999999999999999998 456
Q ss_pred cEEEEeCCCceecCc----------------c-cchhhhccccch---hhhhcc--------------cccccccccc--
Q 012042 239 KVTMIDFPQMVSVSH----------------Q-NAQMYFDRDVEC---IFKFFR--------------KRFHLNFQET-- 282 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~----------------p-~a~~~l~rD~~~---i~~~f~--------------~~y~~~~~~~-- 282 (472)
+-.|+|||+|..... | ....+....+.. -..|.. +.-|+.+++.
T Consensus 171 rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~ 250 (418)
T KOG1167|consen 171 RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLF 250 (418)
T ss_pred CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHh
Confidence 789999999862110 1 001111111111 011111 2234433443
Q ss_pred ccCCCCcchheeccCchhhhhhhccC
Q 012042 283 TDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 283 ~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
....-+.++||||-|++++.+++...
T Consensus 251 k~~~QttaiDiws~GVI~Lslls~~~ 276 (418)
T KOG1167|consen 251 RCPRQTTAIDIWSAGVILLSLLSRRY 276 (418)
T ss_pred hccCcCCccceeeccceeehhhcccc
Confidence 34666888999999999988888643
No 429
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=99.65 E-value=8.3e-16 Score=164.83 Aligned_cols=211 Identities=16% Similarity=0.287 Sum_probs=148.0
Q ss_pred HHHHhh---CCCCCCCCHHHHHHHhCCCCc---hhHHHHHHHHhcccccccCCCccCcccccccccHHHHHHHHhCCcee
Q 012042 20 TAVEMG---MRNHEIVPSELVHRIASLKHG---GTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKTLVNRGVFT 93 (472)
Q Consensus 20 ~~ie~~---~~~~e~Vp~~~i~~~a~l~~~---~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~al~~l~~~~~i~ 93 (472)
++|.+| +.+.+.||.++++.+++|.+. .....+..+++..|-......|.-|.
T Consensus 71 tfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~--------------------- 129 (517)
T COG0661 71 TFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFE--------------------- 129 (517)
T ss_pred chhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcC---------------------
Confidence 466666 889999999999999999987 34556666666644332222232221
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHH-----hhhhhHHhhhc----cchhhHHH---------hHHH
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRA-----VKSKRDYLRHR----NSYNWLYL---------SRLA 155 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~-----~k~~r~yl~~~----~~~~~~~~---------~r~~ 155 (472)
..+|+.++-|+||+|+..+|+.||||+.|++-..... ++..-.++... .+..+... ....
T Consensus 130 --~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 130 --PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred --CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 2799999999999999999999999999987543221 11111122111 11222221 1234
Q ss_pred HHHHHHHHHHhhh-----CCCCcceeee--cCCceeEEeecCCCChhhhhcc----CChHHHHHHHHHH-HHHHHHCCce
Q 012042 156 ALKEFAFMKALED-----HGFPVPNAVD--CNRHCVIMSLVQGYPLVQVNQL----QNPDSVFETIIGL-VVRLAEHGLI 223 (472)
Q Consensus 156 a~rE~~~L~~L~~-----~gi~vP~~i~--~~~~~LVMEyi~G~~L~~l~~~----~~~~~i~~qIl~a-L~~LH~~GII 223 (472)
..+|..++.++.+ +.+.||+++. .+..+|+|||++|.++.+.... .+...+...++.+ +..+-..|++
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgff 287 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFF 287 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCcc
Confidence 5678888888764 3488999996 4889999999999998886321 2444566655543 3455679999
Q ss_pred eccCCCCcEEEcCCCcEEEEeCCCceecCc
Q 012042 224 HCDFNEFNIMIDDDEKVTMIDFPQMVSVSH 253 (472)
Q Consensus 224 HrDLKP~NILl~~~g~vkIIDFG~A~~~~~ 253 (472)
|+|+||+||+++.+|++.++|||.+..++.
T Consensus 288 HaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 288 HADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 999999999999999999999999987754
No 430
>PRK10345 hypothetical protein; Provisional
Probab=99.64 E-value=1.2e-15 Score=146.49 Aligned_cols=128 Identities=11% Similarity=0.132 Sum_probs=89.0
Q ss_pred cceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
...||+|+||.||. ++ ++.. +||+.+...... ...+.+|+.++..|.+.+...|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~----------------------~~~~~rEi~~l~~L~~~~~~h~ 61 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGG----------------------DKEIRRELKYYAHLSRRLIDWS 61 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccch----------------------HHHHHHHHHHHHHhhccCCCCc
Confidence 36899999999995 54 4444 799886532111 1135689999999976444445
Q ss_pred ee---eec---C----Cce-eEEee--cCCCChhhhhccC---ChHHHHHHHHHHH-HHHHHCCceeccCCCCcEEEcC-
Q 012042 175 NA---VDC---N----RHC-VIMSL--VQGYPLVQVNQLQ---NPDSVFETIIGLV-VRLAEHGLIHCDFNEFNIMIDD- 236 (472)
Q Consensus 175 ~~---i~~---~----~~~-LVMEy--i~G~~L~~l~~~~---~~~~i~~qIl~aL-~~LH~~GIIHrDLKP~NILl~~- 236 (472)
++ +++ + ..+ +|||| +.+++|.+++... .+..++.+++.++ .|||+++||||||||+|||++.
T Consensus 62 nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 62 GIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRI 141 (210)
T ss_pred ccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEecc
Confidence 44 332 1 223 78999 5579999987432 1223567777666 8999999999999999999973
Q ss_pred ---CCcEEEEeCCCc
Q 012042 237 ---DEKVTMIDFPQM 248 (472)
Q Consensus 237 ---~g~vkIIDFG~A 248 (472)
++.++||||+-+
T Consensus 142 ~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 142 SESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCCcEEEEECCCC
Confidence 237999995444
No 431
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=2.9e-15 Score=131.32 Aligned_cols=129 Identities=21% Similarity=0.353 Sum_probs=102.9
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
.+.||.|.++.||++...+ ..++||+.+.... ...+.+|+.++..|.+.+..+|.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------------------------~~~~~~e~~~~~~l~~~~~~~p~ 57 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------------------------GADREREVAILQLLARKGLPVPK 57 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc------------------------hhHHHHHHHHHHHHHHcCCCCCe
Confidence 4679999999999998754 7899998754321 01245799999999876667888
Q ss_pred eeec----CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHC---CceeccCCCCcEEEcCCCcEEEEeCCCc
Q 012042 176 AVDC----NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEH---GLIHCDFNEFNIMIDDDEKVTMIDFPQM 248 (472)
Q Consensus 176 ~i~~----~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~---GIIHrDLKP~NILl~~~g~vkIIDFG~A 248 (472)
++.. +..+++|||++|.++..+ .......++.+++.++.+||.. |++|||++|.|||++..+.++++|||.+
T Consensus 58 ~~~~~~~~~~~~~v~e~~~g~~~~~~-~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~ 136 (155)
T cd05120 58 VLASGESDGWSYLLMEWIEGETLDEV-SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYA 136 (155)
T ss_pred EEEEcCCCCccEEEEEecCCeecccC-CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccc
Confidence 8775 358999999999887654 1112345788999999999974 7999999999999998889999999998
Q ss_pred ee
Q 012042 249 VS 250 (472)
Q Consensus 249 ~~ 250 (472)
..
T Consensus 137 ~~ 138 (155)
T cd05120 137 GY 138 (155)
T ss_pred cC
Confidence 64
No 432
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.61 E-value=5.2e-15 Score=134.89 Aligned_cols=126 Identities=18% Similarity=0.240 Sum_probs=99.3
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
++|+.|.++.||++... |..|+||+........ ....+|+.++..+.+.++ +|.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~-----------------------~~~~~E~~~l~~l~~~~~-~P~~ 58 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELL-----------------------INRENEAENSKLAAEAGI-GPKL 58 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccc-----------------------cCHHHHHHHHHHHHHhCC-CCce
Confidence 57899999999999865 7789999875432111 012479999999987654 6888
Q ss_pred eecC--CceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCc-----eeccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 177 VDCN--RHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGL-----IHCDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 177 i~~~--~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GI-----IHrDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
+... ..++||||++|.++.... .....++.+++.++..||..++ +|||++|.|||++ ++.+++|||+.+.
T Consensus 59 ~~~~~~~~~lv~e~i~G~~l~~~~--~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 59 YYFDPETGVLITEFIEGSELLTED--FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred EEEeCCCCeEEEEecCCCcccccc--ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 8764 379999999999886541 1234578899999999999885 9999999999998 6789999999986
Q ss_pred e
Q 012042 250 S 250 (472)
Q Consensus 250 ~ 250 (472)
.
T Consensus 136 ~ 136 (170)
T cd05151 136 M 136 (170)
T ss_pred C
Confidence 3
No 433
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.60 E-value=1.8e-14 Score=138.31 Aligned_cols=230 Identities=16% Similarity=0.148 Sum_probs=154.1
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+...||.|+||.||++.+. ..+++|++........ .....+.+|...+..+.+++ .
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~-------------------~~~~~~~~e~~~~~~~~~~~-~ 59 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS-------------------KEVERFLREIQILASLNHPP-N 59 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch-------------------hHHHHHHHHHHHHHHccCCc-c
Confidence 456788999999999999887 7899998864321110 01124557888899988763 1
Q ss_pred cceeee---c-CCceeEEeecCCCChhhhhccC-----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC-
Q 012042 173 VPNAVD---C-NRHCVIMSLVQGYPLVQVNQLQ-----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE- 238 (472)
Q Consensus 173 vP~~i~---~-~~~~LVMEyi~G~~L~~l~~~~-----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g- 238 (472)
+..... . ...+++|+|+.|..+..+.... . ...++.+++.++.++|..|++|||+||.||+++..+
T Consensus 60 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~ 139 (384)
T COG0515 60 IVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR 139 (384)
T ss_pred eeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC
Confidence 222222 1 3369999999999998654321 1 124788999999999999999999999999999887
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc---CCCCcchheeccCchhhhhhhccCCcch---
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD---GDDGSDIDTDEGSRLSFASISKTAGFLD--- 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~---~~~~~~sDiySlG~~~f~~~t~~~~~l~--- 312 (472)
.++++|||.+............. .......+.....+|+.... ...+...|+||+|+.++..+++..+...
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~~~~---~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~ 216 (384)
T COG0515 140 VVKLIDFGLAKLLPDPGSTSSIP---ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216 (384)
T ss_pred eEEEeccCcceecCCCCcccccc---ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 69999999997544322111000 01122333334445554433 5789999999999888887775432100
Q ss_pred --------hhhhccC-------CC--------HHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --------KELAASG-------FT--------RKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --------~~~~~~~-------~s--------~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+.... .. ....+++.+++..+|..|.+......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 217 SSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 0011111 11 35779999999999999988877655
No 434
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=4.6e-15 Score=167.04 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=123.1
Q ss_pred hCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 88 NRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 88 ~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
..|..+.|.+.||+|++|.||+|...+|+.||||+-++....- -|+. .+++.||.
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE-------fYI~------------------~q~~~RLk 749 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE-------FYIC------------------LQVMERLK 749 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee-------eeeh------------------HHHHHhhc
Confidence 3456688899999999999999999889999999987543211 0110 12233333
Q ss_pred hC---C-CCcce-eeecCCceeEEeecCCCChhhhhccC-C-----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 168 DH---G-FPVPN-AVDCNRHCVIMSLVQGYPLVQVNQLQ-N-----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 168 ~~---g-i~vP~-~i~~~~~~LVMEyi~G~~L~~l~~~~-~-----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
.. + .++-. .+..+..+||+||.+-|+|.+++... . .--+..+++..|..||.+|||||||||.|.||..
T Consensus 750 ~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 750 PQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRR 829 (974)
T ss_pred hhhhcchHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeec
Confidence 00 0 00011 12236788999999999998886522 1 1136679999999999999999999999999952
Q ss_pred -------CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccc-cccccCCCCcchheeccCchhhhhhhc
Q 012042 237 -------DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNF-QETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 237 -------~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~-~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
...++|||||.|+.+. +-.|..... .+...=+..+ ++..+..+++..|-|.+-.++.-++-+
T Consensus 830 ~~~~~~~~~~l~lIDfG~siDm~-------lfp~~~~F~-~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 830 EICADSDSKGLYLIDFGRSIDMK-------LFPDGTKFK-AVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred ccCCCCcccceEEEecccceeee-------EcCCCcEEe-eeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 2348999999999774 111221111 1111122333 334678899999999888777555544
No 435
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.56 E-value=3e-14 Score=132.37 Aligned_cols=140 Identities=19% Similarity=0.242 Sum_probs=106.0
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
...|-+|+++.|+++.. .|+.++||. |.. |..| +..--..+.+.+..+|++.|.+++..|+++|.
T Consensus 12 l~likQGAEArv~~~~~-~Ge~~iIK~-Rf~-------K~YR------HP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~ 76 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF-SGEAAIIKE-RFS-------KRYR------HPALDQKLTRKRTKQEARLLAKCRALGIPAPR 76 (229)
T ss_pred ceeeeccceeeEeeecc-CCceeEEee-ccc-------cccc------chHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 46788999999999966 588999994 211 1011 11112235667888999999999999999999
Q ss_pred eee--cCCceeEEeecCCC-Chhhhhcc--C----Ch--HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc---EE
Q 012042 176 AVD--CNRHCVIMSLVQGY-PLVQVNQL--Q----NP--DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK---VT 241 (472)
Q Consensus 176 ~i~--~~~~~LVMEyi~G~-~L~~l~~~--~----~~--~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~---vk 241 (472)
++. .+...|+|||++|. ++.+.+.. . ++ ..++..|-+.+..||..+||||||..+|||+.+++. +.
T Consensus 77 l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 77 LIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred EEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceE
Confidence 876 58899999999994 44444321 1 12 358899999999999999999999999999986553 58
Q ss_pred EEeCCCcee
Q 012042 242 MIDFPQMVS 250 (472)
Q Consensus 242 IIDFG~A~~ 250 (472)
+||||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999999853
No 436
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.44 E-value=3e-13 Score=135.21 Aligned_cols=230 Identities=20% Similarity=0.209 Sum_probs=121.2
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcch-hHHhhhhhHHhhhccchhhHH-HhHHHHHHHHHHHHHhhhCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTS-FRAVKSKRDYLRHRNSYNWLY-LSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~s-f~~~k~~r~yl~~~~~~~~~~-~~r~~a~rE~~~L~~L~~~g 170 (472)
..+..||.|+++.||.+++ .+|+++|||++...... -..++..++-.-.-.. +.. .....|....++|.-+.--.
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~--~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITL--FPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGG--STT--SHHHHHHHH-B---SEEEE
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhh--hccCCCHHHHHHhceEEeeeEEEE
Confidence 4579999999999999999 57999999998654311 1111111100000000 000 01111222222222111000
Q ss_pred C-Ccceeee---------cCCceeEEeecCCCChhhhhcc-----CC--h------HHHHHHHHHHHHHHHHCCceeccC
Q 012042 171 F-PVPNAVD---------CNRHCVIMSLVQGYPLVQVNQL-----QN--P------DSVFETIIGLVVRLAEHGLIHCDF 227 (472)
Q Consensus 171 i-~vP~~i~---------~~~~~LVMEyi~G~~L~~l~~~-----~~--~------~~i~~qIl~aL~~LH~~GIIHrDL 227 (472)
+ ..|..+. .-..+++|.-+. .+|..+... .. + ..+..|++..+++||..||+|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 0 0011111 113355666553 445444321 11 1 124578899999999999999999
Q ss_pred CCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc---------cCCCCcchheeccCc
Q 012042 228 NEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---------DGDDGSDIDTDEGSR 298 (472)
Q Consensus 228 KP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---------~~~~~~~sDiySlG~ 298 (472)
+|.|++++.+|.+.|.||+..+........ .. +. -++.|++.. .-.++.+.|.|++|+
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-------~~----~~--~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRC-------SE----FP--VAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEG-------GG----S---TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeec-------cC----CC--cccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999887754321100 01 11 122333221 124788999999999
Q ss_pred hhhhhhhccCCc--------chhhh-hccCCCHHHHHHHHHHHhcCcccC
Q 012042 299 LSFASISKTAGF--------LDKEL-AASGFTRKDQDVIQKFIGGSIEES 339 (472)
Q Consensus 299 ~~f~~~t~~~~~--------l~~~~-~~~~~s~~~~~~l~k~l~~~p~~R 339 (472)
++|..-++.-++ .++.. .+..++...+.+|..||+.+|++|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 998887754221 11111 245788889999999999999988
No 437
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=99.44 E-value=8.6e-13 Score=141.54 Aligned_cols=206 Identities=16% Similarity=0.277 Sum_probs=140.2
Q ss_pred CCCCCCCCHHHHHHHhCCCCc---hhHHHHHHHHhcccccccCCCccCcccccccccHHHHHHHHhCCceeeecceeccc
Q 012042 26 MRNHEIVPSELVHRIASLKHG---GTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVG 102 (472)
Q Consensus 26 ~~~~e~Vp~~~i~~~a~l~~~---~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~al~~l~~~~~i~~i~~~IG~G 102 (472)
+.+..++|.|++..++.|.+. .....+.++++..|-..-...|.-|. -.+||.-
T Consensus 116 st~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~-----------------------~~piaaA 172 (538)
T KOG1235|consen 116 STRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFD-----------------------EEPIAAA 172 (538)
T ss_pred ccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcC-----------------------cchhhhc
Confidence 567889999999999998877 33555666665544322222222221 3789999
Q ss_pred CceeEEEEEeCCCCEEEEEEeecCcchhH-----HhhhhhHHhhh-ccc--hhhHH-HhH------HHHHHHHHHHHHhh
Q 012042 103 KESDIFEVAREDGTVLAMKLHRLGRTSFR-----AVKSKRDYLRH-RNS--YNWLY-LSR------LAALKEFAFMKALE 167 (472)
Q Consensus 103 ~fg~VY~a~~~~g~~VAVKi~r~~~~sf~-----~~k~~r~yl~~-~~~--~~~~~-~~r------~~a~rE~~~L~~L~ 167 (472)
+.|+||+|+.++|+.||||+.+++-..+. .++-.-.++.. .+. ..|+. ... ..+.+|+++..++.
T Consensus 173 SlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~ 252 (538)
T KOG1235|consen 173 SLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFR 252 (538)
T ss_pred chhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHH
Confidence 99999999999999999999998754331 11111122211 122 33332 122 22445666555543
Q ss_pred h----CC----CCcceeeec--CCceeEEeecCCCChhhhhc----cCChHHHHHHHHHHHHH-HHHCCceeccCCCCcE
Q 012042 168 D----HG----FPVPNAVDC--NRHCVIMSLVQGYPLVQVNQ----LQNPDSVFETIIGLVVR-LAEHGLIHCDFNEFNI 232 (472)
Q Consensus 168 ~----~g----i~vP~~i~~--~~~~LVMEyi~G~~L~~l~~----~~~~~~i~~qIl~aL~~-LH~~GIIHrDLKP~NI 232 (472)
+ .. +.+|+++.. ..-+|+||||+|..+.++.. .-.+..+...+.++... |-..|++|+|.||.||
T Consensus 253 ~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHPGNi 332 (538)
T KOG1235|consen 253 ENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHPGNI 332 (538)
T ss_pred HHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCCCcE
Confidence 2 22 558998875 57899999999998877632 12567788888776654 4688999999999999
Q ss_pred EEcC----CCcEEEEeCCCceecCcc
Q 012042 233 MIDD----DEKVTMIDFPQMVSVSHQ 254 (472)
Q Consensus 233 Ll~~----~g~vkIIDFG~A~~~~~p 254 (472)
++.+ ++.+.+.|||+...+++.
T Consensus 333 lv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 333 LVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred EEecCCCCCccEEEEcccccccccHH
Confidence 9984 567999999999987764
No 438
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=1.5e-13 Score=150.66 Aligned_cols=231 Identities=16% Similarity=0.122 Sum_probs=147.3
Q ss_pred cceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 96 GRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
...+|.|++|.|+.+... ....++.|.++...... ...+.|. . ....|+-+-..|.|.++ ++
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~---~s~~~~~-----------~--~i~sE~~i~~~l~h~~~-~e 385 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPT---ESERKYN-----------Y--NITSEFCIGSSLSHPNI-IE 385 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCc---ccHHHHh-----------h--hhhhheeecccccCCch-hh
Confidence 578999999988888763 34445555443110000 0011111 0 13346665566665432 11
Q ss_pred eee---ecCCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 175 NAV---DCNRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 175 ~~i---~~~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
.+. ......-+||||++ +|..++... ....++.|++.++.|||..||.|||+||+|+|+..+|.+||+||
T Consensus 386 ~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Df 464 (601)
T KOG0590|consen 386 TLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDF 464 (601)
T ss_pred hHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeec
Confidence 111 11333344999999 888875432 23458999999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCC-CcchheeccCchhhhhhhccCC----cch-h---h--
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDD-GSDIDTDEGSRLSFASISKTAG----FLD-K---E-- 314 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~-~~~sDiySlG~~~f~~~t~~~~----~l~-~---~-- 314 (472)
|.+....-|.... +.....+++..-+++|+......+ ....||||.|+++..+++++.. ... . .
T Consensus 465 g~~~vf~~~~e~~-----~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~ 539 (601)
T KOG0590|consen 465 GAASVFRYPWEKN-----IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN 539 (601)
T ss_pred CcceeeccCcchh-----hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc
Confidence 9997655443221 122334455555556666655444 4458999999999888876321 000 0 0
Q ss_pred ------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 315 ------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 315 ------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
-...-.....+.+|-+||+.+|.+|.+.++-..+.
T Consensus 540 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~ 586 (601)
T KOG0590|consen 540 YSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDE 586 (601)
T ss_pred cccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhCh
Confidence 01122555668999999999999999988766543
No 439
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.41 E-value=1.6e-12 Score=124.20 Aligned_cols=117 Identities=23% Similarity=0.444 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhhhCCCCcceeeecC--------CceeEEeecCCC-Chhhhhcc------CChHHHHHHHHHHHHHH
Q 012042 153 RLAALKEFAFMKALEDHGFPVPNAVDCN--------RHCVIMSLVQGY-PLVQVNQL------QNPDSVFETIIGLVVRL 217 (472)
Q Consensus 153 r~~a~rE~~~L~~L~~~gi~vP~~i~~~--------~~~LVMEyi~G~-~L~~l~~~------~~~~~i~~qIl~aL~~L 217 (472)
+..+.+|+.++.+|...||++|.|+++. +.+||||+++|. +|.++... .....++.+++..+..|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 4467899999999999999999999862 348999999984 78887643 13356899999999999
Q ss_pred HHCCceeccCCCCcEEEcCCC---cEEEEeCCCceecCcccchhhhccccchhhhhc
Q 012042 218 AEHGLIHCDFNEFNIMIDDDE---KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFF 271 (472)
Q Consensus 218 H~~GIIHrDLKP~NILl~~~g---~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f 271 (472)
|.+||+|+|++|.|||++.++ .+.+|||+.+..... ......+|+..+...+
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~--~~~~~~~dL~~L~rs~ 189 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS--SRRWRAKDLARLLRSL 189 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC--ChHHHHHhHHHHHHhc
Confidence 999999999999999999776 799999999875443 2223345655554443
No 440
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.41 E-value=1.7e-13 Score=138.85 Aligned_cols=223 Identities=15% Similarity=0.089 Sum_probs=149.5
Q ss_pred eeecceecccCceeEEEEEeCC------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARED------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
.++...+-+|.||.||+|.+.+ .+.|.||..+...... .-..+..|.-.|..+
T Consensus 286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~i---------------------Qv~~~L~es~lly~~ 344 (563)
T KOG1024|consen 286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQI---------------------QVNLLLQESMLLYGA 344 (563)
T ss_pred eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHH---------------------HHHHHHHHHHHHhcC
Confidence 4556788899999999997632 2334555332211111 012345677777777
Q ss_pred hhCCCCcce---eeecCCceeEEeecCCCChhhhhcc------CChH--------HHHHHHHHHHHHHHHCCceeccCCC
Q 012042 167 EDHGFPVPN---AVDCNRHCVIMSLVQGYPLVQVNQL------QNPD--------SVFETIIGLVVRLAEHGLIHCDFNE 229 (472)
Q Consensus 167 ~~~gi~vP~---~i~~~~~~LVMEyi~G~~L~~l~~~------~~~~--------~i~~qIl~aL~~LH~~GIIHrDLKP 229 (472)
.|+|+.-.- +......++++.+..-++|..++.. ..+. .++.|+..++.+||++||||.||-.
T Consensus 345 sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAa 424 (563)
T KOG1024|consen 345 SHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAA 424 (563)
T ss_pred cCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhh
Confidence 766531111 1123567788888887888877541 1111 2678999999999999999999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhhcc-
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASISKT- 307 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~- 307 (472)
.|.+|++.-++||+|-.+++. +|..|..|+..-=.++.. ++++......++..+|+||||+.+.|+.|-.
T Consensus 425 RNCvIdd~LqVkltDsaLSRD--------LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~ 496 (563)
T KOG1024|consen 425 RNCVIDDQLQVKLTDSALSRD--------LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGK 496 (563)
T ss_pred hcceehhheeEEeccchhccc--------cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCC
Confidence 999999999999999988875 344555555432223322 3444445788999999999999999999832
Q ss_pred CC--cchh-----------hh-hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 308 AG--FLDK-----------EL-AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 308 ~~--~l~~-----------~~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.+ .+|. .+ .+-+...++=.++.=|-...|++||+.+.
T Consensus 497 ~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 497 LPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred CCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 11 1221 11 13445677778888899999999999753
No 441
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.41 E-value=3.2e-13 Score=123.73 Aligned_cols=121 Identities=7% Similarity=0.005 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc
Q 012042 205 SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD 284 (472)
Q Consensus 205 ~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~ 284 (472)
.++.||+.+|.|||+.+ ||.|||++.++.+++ ||.+........ .+..++++|+....
T Consensus 21 ~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~--------------~g~~~y~aPE~~~~ 78 (176)
T smart00750 21 AVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS--------------RVDPYFMAPEVIQG 78 (176)
T ss_pred HHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccC--------------CCcccccChHHhcC
Confidence 58899999999999998 999999999999888 999875533210 23344556666667
Q ss_pred CCCCcchheeccCchhhhhhhccCCcch-----h---hh----h---------ccCCCH--HHHHHHHHHHhcCcccCCC
Q 012042 285 GDDGSDIDTDEGSRLSFASISKTAGFLD-----K---EL----A---------ASGFTR--KDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 285 ~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~---~~----~---------~~~~s~--~~~~~l~k~l~~~p~~R~s 341 (472)
..++.++||||||+++|+++++..+... . .+ . ...++. ++.++|.+|+..+|++||+
T Consensus 79 ~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~ 158 (176)
T smart00750 79 QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA 158 (176)
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC
Confidence 8899999999999999999997643211 0 00 0 011223 5889999999999999999
Q ss_pred CCCCCC
Q 012042 342 DDEGSD 347 (472)
Q Consensus 342 ~~e~~~ 347 (472)
+.+..+
T Consensus 159 ~~~ll~ 164 (176)
T smart00750 159 ANHYLA 164 (176)
T ss_pred HHHHHH
Confidence 876543
No 442
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=6e-13 Score=138.07 Aligned_cols=141 Identities=22% Similarity=0.368 Sum_probs=103.0
Q ss_pred ccCcccccccccHHHHHHHHhCCceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccch
Q 012042 68 YDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSY 146 (472)
Q Consensus 68 y~gy~lt~~g~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~ 146 (472)
...|+ ..||..+.+-..++.| -|-+.++||-|-|++||+|.+ .+.+.||+|+.+... - |
T Consensus 58 ~~dY~--kGGYHpV~IGD~F~~g-RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-h---------Y------- 117 (590)
T KOG1290|consen 58 PEDYR--KGGYHPVRIGDVFNGG-RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-H---------Y------- 117 (590)
T ss_pred hhhhh--cCCCceeeccccccCc-eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-H---------H-------
Confidence 34554 4588888888777755 356789999999999999999 568899999986321 1 1
Q ss_pred hhHHHhHHHHHHHHHHHHHhhhCCCC------cceeeec--------CCceeEEeecCCCChhhhhccC--------ChH
Q 012042 147 NWLYLSRLAALKEFAFMKALEDHGFP------VPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ--------NPD 204 (472)
Q Consensus 147 ~~~~~~r~~a~rE~~~L~~L~~~gi~------vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~--------~~~ 204 (472)
.+.+.-|+.+|+++....-. |..+++. ...|+|+|++ |..|..++... ...
T Consensus 118 ------tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK 190 (590)
T KOG1290|consen 118 ------TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVK 190 (590)
T ss_pred ------HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHH
Confidence 23577899999999765311 2223332 2468999998 55555554321 235
Q ss_pred HHHHHHHHHHHHHH-HCCceeccCCCCcEEEc
Q 012042 205 SVFETIIGLVVRLA-EHGLIHCDFNEFNIMID 235 (472)
Q Consensus 205 ~i~~qIl~aL~~LH-~~GIIHrDLKP~NILl~ 235 (472)
+|+.||+.+|.||| ++||||-||||+|||+.
T Consensus 191 ~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 191 EICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred HHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 69999999999999 57999999999999994
No 443
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.38 E-value=4.4e-12 Score=126.23 Aligned_cols=136 Identities=16% Similarity=0.151 Sum_probs=97.4
Q ss_pred CceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeeec---
Q 012042 103 KESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--- 179 (472)
Q Consensus 103 ~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~--- 179 (472)
....|+++.. +|+.|.||.+.... ....++... .. ......+.+|+..+.+|...|+++|.|+.+
T Consensus 34 ~~rrvvr~~~-~g~~~~vKr~~~~~-~~~~~k~l~-~~---------~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~ 101 (268)
T PRK15123 34 EGRRTLRFEL-AGKSYFLKWHRGTG-WGEIFKNLL-SL---------RMPVLGADREWRAIHRLHEVGVDTMTGVAFGER 101 (268)
T ss_pred CCceEEEEEE-CCEEEEEEEecCCc-HHHHhhhhc-cc---------ccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEe
Confidence 3344667644 57899999874321 101111111 00 011224779999999999999999999764
Q ss_pred ------CCceeEEeecCCC-Chhhhhcc----C----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-------C
Q 012042 180 ------NRHCVIMSLVQGY-PLVQVNQL----Q----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-------D 237 (472)
Q Consensus 180 ------~~~~LVMEyi~G~-~L~~l~~~----~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-------~ 237 (472)
...+||||+++|. +|.++... . ....++.+++..+..||..||+||||+|.|||++. +
T Consensus 102 ~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 102 GSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCC
Confidence 2478999999986 78776421 1 12358889999999999999999999999999974 4
Q ss_pred CcEEEEeCCCcee
Q 012042 238 EKVTMIDFPQMVS 250 (472)
Q Consensus 238 g~vkIIDFG~A~~ 250 (472)
..+.||||+.+..
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6799999998864
No 444
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.38 E-value=2.4e-12 Score=121.75 Aligned_cols=133 Identities=20% Similarity=0.284 Sum_probs=96.9
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
.+||.|..+.||++...+|..++||+.+.+...+. .....+|+.++..+.+.++++|.+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~---------------------~~~~~~E~~~~~~l~~~~~~vp~~ 62 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPS---------------------AHDVAREYRVLRALAGTGVPVPKV 62 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcc---------------------cccHHHHHHHHHHhhCCCCCCCCE
Confidence 57899999999999887678999998764432100 012457999999999888889998
Q ss_pred eecC-------CceeEEeecCCCChhhhhc--cCC---hHHHHHHHHHHHHHHHH-------------------------
Q 012042 177 VDCN-------RHCVIMSLVQGYPLVQVNQ--LQN---PDSVFETIIGLVVRLAE------------------------- 219 (472)
Q Consensus 177 i~~~-------~~~LVMEyi~G~~L~~l~~--~~~---~~~i~~qIl~aL~~LH~------------------------- 219 (472)
+... ..++||||++|.++..... ... ...++.+++.+|.+||+
T Consensus 63 ~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (223)
T cd05154 63 LALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARW 142 (223)
T ss_pred EEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHH
Confidence 8752 4589999999988766431 011 12345555555555542
Q ss_pred -------------------------------CCceeccCCCCcEEEcC--CCcEEEEeCCCcee
Q 012042 220 -------------------------------HGLIHCDFNEFNIMIDD--DEKVTMIDFPQMVS 250 (472)
Q Consensus 220 -------------------------------~GIIHrDLKP~NILl~~--~g~vkIIDFG~A~~ 250 (472)
..++|+|++|.|||+++ ++.+.||||+.+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 143 RRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 35799999999999997 56689999998863
No 445
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.28 E-value=3.6e-12 Score=142.45 Aligned_cols=225 Identities=14% Similarity=0.121 Sum_probs=140.5
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcc--hhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRT--SFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~--sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
...+.||++.|=+|.+|.+..|. |+||++-...+ +.+.+++ -..|++ ..+..
T Consensus 26 ~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~q--------------------rL~~ik--~~l~~--- 79 (1431)
T KOG1240|consen 26 HYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQ--------------------RLEEIK--FALMK--- 79 (1431)
T ss_pred eeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHH--------------------HHHHHH--HHhhc---
Confidence 34688999999999999998886 99999853322 2222110 112333 12221
Q ss_pred Ccceeeec-------CCceeEEeecCCCChhhhhccC----ChH--HHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVDC-------NRHCVIMSLVQGYPLVQVNQLQ----NPD--SVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~~----~~~--~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+|+.+.+ ...|||-+|+. .+|++.+... ..+ -++-|++.+|..+|..||+|||||.+||||+.-+
T Consensus 80 -~pn~lPfqk~~~t~kAAylvRqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWN 157 (1431)
T KOG1240|consen 80 -APNCLPFQKVLVTDKAAYLVRQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWN 157 (1431)
T ss_pred -CCcccchHHHHHhhHHHHHHHHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeec
Confidence 2444332 34677777875 3455544322 112 2788999999999999999999999999999888
Q ss_pred cEEEEeCCCceecC----cccchh-hhccc---cchh-h-hhccccccccccccccCCCCcchheeccCchhhhhhhccC
Q 012042 239 KVTMIDFPQMVSVS----HQNAQM-YFDRD---VECI-F-KFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 239 ~vkIIDFG~A~~~~----~p~a~~-~l~rD---~~~i-~-~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
-+.|.||..-+..- +|..-. +|... ...+ . +|.. ..|..........++.+.||+|.|++++|+.+...
T Consensus 158 W~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~-~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~ 236 (1431)
T KOG1240|consen 158 WLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVS-ALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR 236 (1431)
T ss_pred hhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhc-cccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence 99999998766442 333222 22111 1111 0 1221 12222222222338899999999999999887522
Q ss_pred Ccch--h-------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 309 GFLD--K-------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 309 ~~l~--~-------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+..+ . .+...--+..++++|..||+.+|.+|-|+++-+.
T Consensus 237 PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~ 290 (1431)
T KOG1240|consen 237 PLFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQ 290 (1431)
T ss_pred CcccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHH
Confidence 2111 1 0111112345789999999999999999987765
No 446
>PRK09902 hypothetical protein; Provisional
Probab=99.19 E-value=1.5e-10 Score=110.94 Aligned_cols=134 Identities=19% Similarity=0.192 Sum_probs=101.2
Q ss_pred ecccCceeEEEEEeCCCCEEEEEEeec-CcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVAREDGTVLAMKLHRL-GRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~~~g~~VAVKi~r~-~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
-|+||.|.|++... .|..+-||.... -+.+.+ . ...+..+.+|+..|.+|...|++||.|+
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r--------------~---P~g~ptf~rE~~~L~~L~~~GvPVP~pv 87 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVR--------------Y---PFGRPTIVREVAVIKELERAGVIVPKIV 87 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCccccccc--------------C---CCCchHHHHHHHHHHHHHHcCCCCCccc
Confidence 36799999999755 355788886531 111111 0 1123456789999999999999999998
Q ss_pred ec--------CCceeEEeecCC-CChhhhhccC-----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc-
Q 012042 178 DC--------NRHCVIMSLVQG-YPLVQVNQLQ-----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK- 239 (472)
Q Consensus 178 ~~--------~~~~LVMEyi~G-~~L~~l~~~~-----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~- 239 (472)
.. .+.+||+|-++| .+|..++... .+ ..++.+++.++..||+.|+.|+|+.|.||+++.+|.
T Consensus 88 f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~ 167 (216)
T PRK09902 88 FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKA 167 (216)
T ss_pred eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCe
Confidence 53 248899999987 5787765321 11 368999999999999999999999999999986667
Q ss_pred -EEEEeCCCcee
Q 012042 240 -VTMIDFPQMVS 250 (472)
Q Consensus 240 -vkIIDFG~A~~ 250 (472)
+.+|||--+..
T Consensus 168 ~v~lIDlEk~r~ 179 (216)
T PRK09902 168 EAGFLDLEKSRR 179 (216)
T ss_pred eEEEEEhhccch
Confidence 99999987764
No 447
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.16 E-value=5.2e-10 Score=107.73 Aligned_cols=166 Identities=16% Similarity=0.269 Sum_probs=106.7
Q ss_pred ccCccccccc--ccHHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccc
Q 012042 68 YDGFRLTYLG--YDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNS 145 (472)
Q Consensus 68 y~gy~lt~~g--~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~ 145 (472)
|.||.+-+-- -.+..+-.-+..+- +.+.+++-......|.+... +|..+++|..+....-+. +.+.
T Consensus 7 ~k~~~vy~~e~~~~y~~l~~~i~~~~-~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~e-----r~~~----- 74 (229)
T PF06176_consen 7 YKGYKVYYKENDEKYLELGEKILDNN-YKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPE-----RRFK----- 74 (229)
T ss_pred eCCEEEEEecCchHHHHHHHHHHhCC-ceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHH-----HHHH-----
Confidence 4555443321 23444433333332 23445666666666776644 678999998764321110 0000
Q ss_pred hhhHHHhHHHHHHHHHHHHHhhhCCCCcceee-ec---------CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHH
Q 012042 146 YNWLYLSRLAALKEFAFMKALEDHGFPVPNAV-DC---------NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVV 215 (472)
Q Consensus 146 ~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i-~~---------~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~ 215 (472)
+ -.....+.+.+..+.++...|+..|..+ .. ...+|+||||+|.+|.+... ..+.+...+..++.
T Consensus 75 -s--f~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--i~e~~~~ki~~~ik 149 (229)
T PF06176_consen 75 -S--FFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED--IDEDLAEKIVEAIK 149 (229)
T ss_pred -H--HhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeecccchh--cCHHHHHHHHHHHH
Confidence 0 0112345678888888888787666532 11 34568999999999987643 23457788889999
Q ss_pred HHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceec
Q 012042 216 RLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251 (472)
Q Consensus 216 ~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~ 251 (472)
.+|+.|++|||++|+|+++++ +.+++|||+-....
T Consensus 150 qlH~~G~~HGD~hpgNFlv~~-~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 150 QLHKHGFYHGDPHPGNFLVSN-NGIRIIDTQGKRMS 184 (229)
T ss_pred HHHHcCCccCCCCcCcEEEEC-CcEEEEECcccccc
Confidence 999999999999999999985 45999999877643
No 448
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.14 E-value=8.4e-12 Score=133.31 Aligned_cols=205 Identities=15% Similarity=0.161 Sum_probs=136.3
Q ss_pred eecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 98 QLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
.+|+|.||.|+++... .|.-+|+|+.+..+..-+. +. ....|-.++...+.+
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~----------~~----------~t~~er~il~~~~~~---- 56 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD----------RT----------HTKQERIILAFVHNT---- 56 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccc----------cc----------ccccHHHHHhhccCC----
Confidence 3799999999988652 3677999987633211110 00 112355666666533
Q ss_pred ceeee-------cCCceeEEeecCCCChhhhhccC-C-----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 174 PNAVD-------CNRHCVIMSLVQGYPLVQVNQLQ-N-----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 174 P~~i~-------~~~~~LVMEyi~G~~L~~l~~~~-~-----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
|..+. -+..+++++|+.|+.|....... . ...+...++-++.++|+.||+|||+|++||+++.+|.+
T Consensus 57 ~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi 136 (612)
T KOG0603|consen 57 PFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHI 136 (612)
T ss_pred CceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCcc
Confidence 33332 26789999999998876654322 1 12355677888999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---hhhh-
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---KELA- 316 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~~~~- 316 (472)
++.|||.++..-.. .+. +++.-++.|++.. --....|.||||+..|+++|+..++-. ..|+
T Consensus 137 ~~tdfglske~v~~--------~~~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~ 201 (612)
T KOG0603|consen 137 KLTDFGLSKEAVKE--------KIA-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILK 201 (612)
T ss_pred ccCCchhhhHhHhh--------hhc-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhh
Confidence 99999999854211 111 2332334555432 356788999999999999998654321 1121
Q ss_pred -ccC----CCHHHHHHHHHHHhcCcccCCC
Q 012042 317 -ASG----FTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 317 -~~~----~s~~~~~~l~k~l~~~p~~R~s 341 (472)
..+ ++...+..+..|+..+|.+|--
T Consensus 202 ~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg 231 (612)
T KOG0603|consen 202 AELEMPRELSAEARSLFRQLFKRNPENRLG 231 (612)
T ss_pred hccCCchhhhHHHHHHHHHHHhhCHHHHhc
Confidence 223 4445567888888899988743
No 449
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.13 E-value=4.5e-10 Score=109.09 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=83.9
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
.+||+|..+.||+. .|..+++|+.+.+... ....+|++++..+...|+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~------------------------~~i~~E~~~l~~l~~~glpvP~~ 59 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFDK------------------------ETIKREFDASRKVFSLGIPTPHP 59 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCCH------------------------HHHHHHHHHHHHHHHcCCCCCce
Confidence 57899999999985 2557889987643211 12357999999999999999999
Q ss_pred eec----CCceeEEeecCCCC-hhhhhccC--ChHHHHHHHHHHH-----------------------------------
Q 012042 177 VDC----NRHCVIMSLVQGYP-LVQVNQLQ--NPDSVFETIIGLV----------------------------------- 214 (472)
Q Consensus 177 i~~----~~~~LVMEyi~G~~-L~~l~~~~--~~~~i~~qIl~aL----------------------------------- 214 (472)
+.. +...+|||+|+|.+ +....... ....+...++..+
T Consensus 60 ~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 139 (226)
T TIGR02172 60 FDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYK 139 (226)
T ss_pred EEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHH
Confidence 976 34589999999974 21111000 0000111111111
Q ss_pred ----HHHH----HCCceeccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 215 ----VRLA----EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 215 ----~~LH----~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
.+|. ...++|+|++|.|||+++++ +.||||+.+.
T Consensus 140 ~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 140 EKARAFIKEVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred HHHHHHHHhCCCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 1111 23578999999999999877 9999999875
No 450
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=4.1e-10 Score=104.55 Aligned_cols=133 Identities=20% Similarity=0.297 Sum_probs=100.9
Q ss_pred ecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 95 VGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 95 i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
+...||+|.+|.||+|.+. |..+|+|+.+... ++ ..+++|+++|..+...++ .|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds--~r----------------------~~l~kEakiLeil~g~~~-~p 79 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS--PR----------------------RNLEKEAKILEILAGEGV-TP 79 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCc--ch----------------------hhHHHHHHHHHHhhhcCC-Cc
Confidence 3478999999999999775 5699999987432 21 246789999999988765 89
Q ss_pred eeeecCCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCC-CCcEEEcCCCcEEEEeCCCceecCc
Q 012042 175 NAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFN-EFNIMIDDDEKVTMIDFPQMVSVSH 253 (472)
Q Consensus 175 ~~i~~~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLK-P~NILl~~~g~vkIIDFG~A~~~~~ 253 (472)
.++.++..++.|||+.|.+|..+.....+ .-...+++..-.|-..||-|+.|+ |..++|..++.++||||..|.....
T Consensus 80 ~vy~yg~~~i~me~i~G~~L~~~~~~~~r-k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~~ 158 (201)
T COG2112 80 EVYFYGEDFIRMEYIDGRPLGKLEIGGDR-KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKKK 158 (201)
T ss_pred eEEEechhhhhhhhhcCcchhhhhhcccH-HHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhccC
Confidence 99999999999999999999877543333 344455566556678899999995 5544444456899999999975444
Q ss_pred c
Q 012042 254 Q 254 (472)
Q Consensus 254 p 254 (472)
|
T Consensus 159 p 159 (201)
T COG2112 159 P 159 (201)
T ss_pred C
Confidence 4
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.08 E-value=2.5e-11 Score=127.54 Aligned_cols=155 Identities=16% Similarity=0.165 Sum_probs=113.5
Q ss_pred CceeEEeecCCCChhhhhccC---------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceec
Q 012042 181 RHCVIMSLVQGYPLVQVNQLQ---------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251 (472)
Q Consensus 181 ~~~LVMEyi~G~~L~~l~~~~---------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~ 251 (472)
..||.|++|.-.+|.+++... ....++.|+..++.| +|.+|+|+||.||....+.+++|-|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 478999999999999987422 223578888899988 99999999999999998889999999998876
Q ss_pred CcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccC------CcchhhhhccCCC----
Q 012042 252 SHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTA------GFLDKELAASGFT---- 321 (472)
Q Consensus 252 ~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~------~~l~~~~~~~~~s---- 321 (472)
.+.. .. ..-....+...+.+.++.|++..+..|+.++|||+||..+|+++.... +.+. .+....|+
T Consensus 407 ~~~~--~~-~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~-d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 407 DKDE--TV-APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLT-DIRDGIIPPEFL 482 (516)
T ss_pred ccCC--cc-cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhh-hhhcCCCChHHh
Confidence 5432 00 011123344566777788888888999999999999999999887211 1110 11111122
Q ss_pred ---HHHHHHHHHHHhcCcccCCCC
Q 012042 322 ---RKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 322 ---~~~~~~l~k~l~~~p~~R~s~ 342 (472)
++...+|++|+.++|.+||+.
T Consensus 483 ~d~p~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 483 QDYPEEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred hcCcHHHHHHHHhcCCCcccCchH
Confidence 223489999999999999943
No 452
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.04 E-value=1.2e-09 Score=103.61 Aligned_cols=129 Identities=27% Similarity=0.438 Sum_probs=83.0
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
++|+.|..+.||++...+ ..+++|+.+.. .. ...+.+|+.++..|...++++|.+
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~-----------------------~~~~~~e~~~~~~l~~~~~pvP~~ 57 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DA-----------------------AERLRREAAVLRQLAEHGIPVPRV 57 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-HH-----------------------HHHHHHHHHHHHHHHHTTSBS--E
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CC-----------------------HHHHHHHHHHHHHHHhcCCCCceE
Confidence 578999999999998876 69999987532 01 113457999999999999999999
Q ss_pred eec-------CCceeEEeecCCCChhh----------------hh----cc--C-Ch----H----H-------H-----
Q 012042 177 VDC-------NRHCVIMSLVQGYPLVQ----------------VN----QL--Q-NP----D----S-------V----- 206 (472)
Q Consensus 177 i~~-------~~~~LVMEyi~G~~L~~----------------l~----~~--~-~~----~----~-------i----- 206 (472)
+.. ...+++|++++|.++.. .+ .. . .+ . . .
T Consensus 58 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (239)
T PF01636_consen 58 LAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLR 137 (239)
T ss_dssp EEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccccccceEEEEEeccccccccccccccccccccchhhhhhccccccccccccccccccccccccccccccccc
Confidence 872 34689999999987766 00 00 0 00 0 0 0
Q ss_pred -------HHHHHH-HHHHHH-------HCCceeccCCCCcEEEc-CCCcEEEEeCCCcee
Q 012042 207 -------FETIIG-LVVRLA-------EHGLIHCDFNEFNIMID-DDEKVTMIDFPQMVS 250 (472)
Q Consensus 207 -------~~qIl~-aL~~LH-------~~GIIHrDLKP~NILl~-~~g~vkIIDFG~A~~ 250 (472)
...+.. .+..++ ..+++|+|++|.|||++ .++.+.||||+.+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 138 ASELFDDLEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred chhhhhhhHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 011112 223332 24699999999999999 566678999998864
No 453
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.98 E-value=3.8e-10 Score=126.33 Aligned_cols=131 Identities=13% Similarity=0.071 Sum_probs=95.2
Q ss_pred HHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhh------hcccccccccccccc
Q 012042 211 IGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFK------FFRKRFHLNFQETTD 284 (472)
Q Consensus 211 l~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~------~f~~~y~~~~~~~~~ 284 (472)
+.+++|+|..||+|||+||.|++|..-|++|+.|||+++..--..+.......+....+ .++..++++|++...
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr 232 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR 232 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence 78899999999999999999999999999999999988643222222222222222222 234456667776666
Q ss_pred CCCCcchheeccCchhhhhhhccCCcc----------------hhhhhccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 285 GDDGSDIDTDEGSRLSFASISKTAGFL----------------DKELAASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 285 ~~~~~~sDiySlG~~~f~~~t~~~~~l----------------~~~~~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
+-|+.-.|.|++|+.+++++.+...+. .+.-.......+.+.+|+.+|+.+|..|--
T Consensus 233 qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 233 QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 779999999999999999888643211 111124567888999999999999998843
No 454
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.95 E-value=1.1e-08 Score=99.64 Aligned_cols=125 Identities=20% Similarity=0.330 Sum_probs=82.1
Q ss_pred eecccCc-eeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 98 QLGVGKE-SDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 98 ~IG~G~f-g~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
.|-.|.. +.||+.... +..++||+..... .. ...+|+.++..|... +++|++
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~-----------------------~~~~E~~~l~~l~~~-~~vP~v 57 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP--TY-----------------------ELEREAERLRWLAGK-LPVPEV 57 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc--cc-----------------------chHHHHHHHHHHHhc-CCCCeE
Confidence 3445554 889999654 4789999864321 00 134699999999877 899999
Q ss_pred eecC----CceeEEeecCCCChhhhhccCChHHHHHHHHH----------------------------------------
Q 012042 177 VDCN----RHCVIMSLVQGYPLVQVNQLQNPDSVFETIIG---------------------------------------- 212 (472)
Q Consensus 177 i~~~----~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~---------------------------------------- 212 (472)
+... ..++||++++|.++...........++.++..
T Consensus 58 ~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (244)
T cd05150 58 IDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDF 137 (244)
T ss_pred EEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhC
Confidence 9763 47999999999887643210000111111111
Q ss_pred -----------HHHHH-------HHCCceeccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 213 -----------LVVRL-------AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 213 -----------aL~~L-------H~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
.+..| ....++|+|+.|.|||++.++.+.||||+.|.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 138 DDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred cHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 11111 12348999999999999987667899999885
No 455
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.94 E-value=9.3e-09 Score=99.82 Aligned_cols=124 Identities=18% Similarity=0.293 Sum_probs=79.1
Q ss_pred ceecccCce-eEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcc
Q 012042 97 RQLGVGKES-DIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg-~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP 174 (472)
..|+.|+.. .||+. +..+++|+.+.... .....+|+.+|..|... ++++|
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~~~------------------------~~~~~~E~~~l~~L~~~~~v~vP 54 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAAGY------------------------AGQVRKEQRWLPRLAPHLPLPVP 54 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCccch------------------------HHHHHHHHHHHHHHhccCCCCCC
Confidence 467777766 49986 24578887542210 11345799999999864 78999
Q ss_pred eeeecC-------CceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHH-----------------------------
Q 012042 175 NAVDCN-------RHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLA----------------------------- 218 (472)
Q Consensus 175 ~~i~~~-------~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH----------------------------- 218 (472)
.++..+ ..+++|++++|.++..... ..+..+..++...+..||
T Consensus 55 ~~~~~~~~~~~~~~~~~l~~~i~G~~l~~~~~-~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (235)
T cd05155 55 EPLGKGEPGEGYPWPWSVYRWLEGETATAAAL-SDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETR 133 (235)
T ss_pred ceeecCCCccCCCcceEEEEeecCCCCCcccc-CCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHH
Confidence 988753 3488999999987743310 111111111111111111
Q ss_pred -----------------------------HCCceeccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 219 -----------------------------EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 219 -----------------------------~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
..+++|+|++|.|||++.++...||||+.|.
T Consensus 134 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 134 EAIEALEGVIDVDAARALWEAALRAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred HHHHHcccccChHHHHHHHHHHhcccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 2358999999999999865445699999875
No 456
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=98.84 E-value=9.1e-09 Score=105.28 Aligned_cols=158 Identities=16% Similarity=0.193 Sum_probs=98.3
Q ss_pred ceeEEeecCCCChhhhhccCC-----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc--CCCc--EEEEeCCCceecC
Q 012042 182 HCVIMSLVQGYPLVQVNQLQN-----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID--DDEK--VTMIDFPQMVSVS 252 (472)
Q Consensus 182 ~~LVMEyi~G~~L~~l~~~~~-----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~--~~g~--vkIIDFG~A~~~~ 252 (472)
.|+||.-.+ .+|.+++.... ..-++.|+++++.+||++||.|||||..||||. +|+. ++|.|||.+---.
T Consensus 318 lylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~ 396 (598)
T KOG4158|consen 318 LYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD 396 (598)
T ss_pred EEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecc
Confidence 577776543 45666553332 234788999999999999999999999999995 4443 6899999875332
Q ss_pred -cccchhhhccccchhhhhccccccccccccc------cCCCCcchheeccCchhhhhhhccCCcch-------------
Q 012042 253 -HQNAQMYFDRDVECIFKFFRKRFHLNFQETT------DGDDGSDIDTDEGSRLSFASISKTAGFLD------------- 312 (472)
Q Consensus 253 -~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~------~~~~~~~sDiySlG~~~f~~~t~~~~~l~------------- 312 (472)
|.....|..-++.--. .-.-+.|++.. --.--.+.|.|..|...||......++..
T Consensus 397 ~hGlqlpy~S~~Vd~GG----Na~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe 472 (598)
T KOG4158|consen 397 NHGLQLPYESDEVDLGG----NAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE 472 (598)
T ss_pred ccccccccccccccCCC----cceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh
Confidence 2211111111111000 00001222210 01123578999999998887765433321
Q ss_pred hhh--hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 313 KEL--AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 313 ~~~--~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.++ .++......+.++-.+|..+|.+|+|+.-
T Consensus 473 ~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i 506 (598)
T KOG4158|consen 473 SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI 506 (598)
T ss_pred hhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence 122 23567778889999999999999998753
No 457
>PRK05231 homoserine kinase; Provisional
Probab=98.82 E-value=6e-08 Score=98.17 Aligned_cols=128 Identities=21% Similarity=0.319 Sum_probs=82.2
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..|+.|....+|+....+| .+++|+++ . .... .+..|+.++..|...|+++|.+
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~-~-~~~~-----------------------~l~~~~~~l~~L~~~glpvP~~ 81 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFE-R-LTAE-----------------------DLPFFLGLMQHLAARGVPVPAP 81 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEec-c-CChH-----------------------HhHHHHHHHHHHHHCCCCCCcc
Confidence 4577888889999977655 68999875 1 1111 1234788899998889999998
Q ss_pred eec----------CCceeEEeecCCCChhh-----h------h---cc---C------C---h---HHHHHHH-------
Q 012042 177 VDC----------NRHCVIMSLVQGYPLVQ-----V------N---QL---Q------N---P---DSVFETI------- 210 (472)
Q Consensus 177 i~~----------~~~~LVMEyi~G~~L~~-----l------~---~~---~------~---~---~~i~~qI------- 210 (472)
+.. +..+++|+|++|..+.. . + +. . . . ...+..+
T Consensus 82 i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (319)
T PRK05231 82 VARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADE 161 (319)
T ss_pred eeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChh
Confidence 852 45789999999975321 1 0 00 0 0 0 0011111
Q ss_pred --------H-HHHHHHH-------HCCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 211 --------I-GLVVRLA-------EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 211 --------l-~aL~~LH-------~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
+ ..+..+. ..|+||+|++|.|||++.+....||||+.+..
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 162 QAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred HHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 0 1111121 24899999999999998654457999999863
No 458
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.81 E-value=6.2e-08 Score=93.49 Aligned_cols=74 Identities=15% Similarity=0.284 Sum_probs=55.5
Q ss_pred ceecccCceeEEEEEeCC--CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcc
Q 012042 97 RQLGVGKESDIFEVARED--GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~--g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP 174 (472)
..|..|-...||++...+ +..|++|+.......+. ...+|+.++..+...|+ +|
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~-----------------------d~~~E~~~~~~l~~~gl-~P 59 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELII-----------------------DRERELRIHKLLSKHGL-AP 59 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcccee-----------------------cHHHHHHHHHHHHhCCC-CC
Confidence 567788888999997764 67899998764322111 11369999999988886 78
Q ss_pred eeeecCCceeEEeecCCCCh
Q 012042 175 NAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 175 ~~i~~~~~~LVMEyi~G~~L 194 (472)
.++......++|||++|.++
T Consensus 60 ~v~~~~~~~~l~e~i~G~~l 79 (235)
T cd05157 60 KLYATFQNGLIYEFIPGRTL 79 (235)
T ss_pred eEEEEeCCcEEEEeeCCCcC
Confidence 88876556799999999775
No 459
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.80 E-value=4.2e-08 Score=98.06 Aligned_cols=128 Identities=20% Similarity=0.282 Sum_probs=85.4
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..|..|....+|+.... +..+++|++... .. .....|+.++..|...|+++|.+
T Consensus 20 ~~i~~G~~n~~y~v~~~-~~~~vLr~~~~~--~~-----------------------~~~~~e~~~l~~L~~~g~~vp~~ 73 (296)
T cd05153 20 EGISAGIENTNYFVTTD-SGRYVLTLFEKV--SA-----------------------EELPFFLALLDHLAERGLPVPRP 73 (296)
T ss_pred ecccCccccceEEEEeC-CCcEEEEEcCCC--Ch-----------------------HhccHHHHHHHHHHHCCCCCCcc
Confidence 56778888899998664 447999987531 11 12346899999999999999998
Q ss_pred eec----------CCceeEEeecCCCChhhh-----h---------c---c--CCh------HHH---------------
Q 012042 177 VDC----------NRHCVIMSLVQGYPLVQV-----N---------Q---L--QNP------DSV--------------- 206 (472)
Q Consensus 177 i~~----------~~~~LVMEyi~G~~L~~l-----~---------~---~--~~~------~~i--------------- 206 (472)
+.. +..++||+|++|.++... . + . ..+ ..+
T Consensus 74 i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (296)
T cd05153 74 IADRDGEYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAE 153 (296)
T ss_pred ccCCCCcEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHH
Confidence 763 356789999999775321 0 0 0 000 000
Q ss_pred -HHHHHHHHHHHHH-------CCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 207 -FETIIGLVVRLAE-------HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 207 -~~qIl~aL~~LH~-------~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
...+..++.++.. .+++|+|++|.|||+++++.+.||||+.+..
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 154 DRALLADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred HHHHHHHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 0111222333322 4799999999999999876678999998863
No 460
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.76 E-value=9.5e-08 Score=96.53 Aligned_cols=128 Identities=20% Similarity=0.286 Sum_probs=84.7
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..++.|....||++...+| .+++|+++.... . .....|+.++..|...|+++|.+
T Consensus 28 ~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~-~-----------------------~~i~~e~~~l~~L~~~g~pvp~~ 82 (307)
T TIGR00938 28 KGIAEGVENSNYLLTTDVG-RYILTLYEKRVK-A-----------------------EELPFFLALTTHLAARGLPVPKP 82 (307)
T ss_pred cccCCccccceEEEEeCCC-cEEEEEecCCCC-H-----------------------HHHHHHHHHHHHHHHCCCCCCcc
Confidence 5677888889999876545 678898753211 0 01235788999998889999998
Q ss_pred eec----------CCceeEEeecCCCChhh--------h------hc---cC------C---hHH---H-----------
Q 012042 177 VDC----------NRHCVIMSLVQGYPLVQ--------V------NQ---LQ------N---PDS---V----------- 206 (472)
Q Consensus 177 i~~----------~~~~LVMEyi~G~~L~~--------l------~~---~~------~---~~~---i----------- 206 (472)
+.. +..+++|+|++|.++.. + ++ .. . ... .
T Consensus 83 i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l 162 (307)
T TIGR00938 83 VKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQL 162 (307)
T ss_pred ccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhccccc
Confidence 863 44679999999965321 0 00 00 0 000 0
Q ss_pred ----HHHHHHHHHHHH-------HCCceeccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 207 ----FETIIGLVVRLA-------EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 207 ----~~qIl~aL~~LH-------~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
...+...+.++. ..+++|+|+++.||++++++.+.||||+.+.
T Consensus 163 ~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 163 EAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 011122333342 2689999999999999987766899999985
No 461
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.76 E-value=4.8e-08 Score=95.97 Aligned_cols=127 Identities=16% Similarity=0.331 Sum_probs=83.3
Q ss_pred eecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 98 QLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
.+..|-...+|+.. .+|..+++|+.......+. + ...+|+.+|..+...|+ +|.++
T Consensus 3 ~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~~~-~---------------------~r~~E~~~l~~l~~~g~-~P~~i 58 (256)
T TIGR02721 3 TLSGGLTNRSWRIE-HPGISFVWRPQSPVCKALG-V---------------------DRQREYQILQALSALGL-APKPI 58 (256)
T ss_pred cCCCcCcCCeEEEE-eCCccEEEeeCCccccccc-C---------------------cHHHHHHHHHHHHhcCC-CCceE
Confidence 35567788999886 4577899997653322220 0 12469999999988776 79999
Q ss_pred ecCCceeEEeecCCCChhhhh-----------------c-cC---Ch---H----HHHHHH---------HHHHHHHHH-
Q 012042 178 DCNRHCVIMSLVQGYPLVQVN-----------------Q-LQ---NP---D----SVFETI---------IGLVVRLAE- 219 (472)
Q Consensus 178 ~~~~~~LVMEyi~G~~L~~l~-----------------~-~~---~~---~----~i~~qI---------l~aL~~LH~- 219 (472)
.....++||||++|.++.... + .. .+ . .++.++ ...+..+-.
T Consensus 59 ~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 138 (256)
T TIGR02721 59 LVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSA 138 (256)
T ss_pred EEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhc
Confidence 887889999999997764310 0 00 00 0 011111 111111211
Q ss_pred -------CCceeccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 220 -------HGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 220 -------~GIIHrDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
..++|+|++|.|||+++++ +.||||..|.
T Consensus 139 ~~~~~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 139 PEPAPLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred cCCCCCCCeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence 2589999999999999766 7999999885
No 462
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.73 E-value=2.9e-09 Score=117.10 Aligned_cols=232 Identities=14% Similarity=0.103 Sum_probs=149.2
Q ss_pred ceeeecceecccCceeEEEEEeCC--CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-
Q 012042 91 VFTAVGRQLGVGKESDIFEVARED--GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE- 167 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~~~--g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~- 167 (472)
..|.+...||+|+|+.|-.+.... ...+|+|.+.....++... .....|..+-+.+.
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~--------------------~~i~~e~~~~~~~s~ 79 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSS--------------------EHIDTETDIQKKLSK 79 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchh--------------------hhcCccccccccccc
Confidence 346667789999999999997743 3446666554322111111 11223555545554
Q ss_pred hCCC-Ccceeee-cCCceeEEeecCCCChhhhh-ccC-------ChHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEcC
Q 012042 168 DHGF-PVPNAVD-CNRHCVIMSLVQGYPLVQVN-QLQ-------NPDSVFETIIGLVVRLA-EHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 168 ~~gi-~vP~~i~-~~~~~LVMEyi~G~~L~~l~-~~~-------~~~~i~~qIl~aL~~LH-~~GIIHrDLKP~NILl~~ 236 (472)
|.++ ..+.+.. ....+++++|..|+.+.... ... ....++.|+..++.|+| ..|+.|+|+||.|.+++.
T Consensus 80 h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~ 159 (601)
T KOG0590|consen 80 HSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE 159 (601)
T ss_pred cccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc
Confidence 3321 1111111 25678899999998887765 221 23458999999999999 999999999999999998
Q ss_pred CC-cEEEEeCCCceecCc-ccchhhhccccchhhhhcccccccccccc-cc-CCCCcchheeccCchhhhhhhccCCcc-
Q 012042 237 DE-KVTMIDFPQMVSVSH-QNAQMYFDRDVECIFKFFRKRFHLNFQET-TD-GDDGSDIDTDEGSRLSFASISKTAGFL- 311 (472)
Q Consensus 237 ~g-~vkIIDFG~A~~~~~-p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~-~~~~~~sDiySlG~~~f~~~t~~~~~l- 311 (472)
.+ .+++.|||+|..... ..+...+...+. +...| ..+++ .+ ...+...|+||.|++++...++..+..
T Consensus 160 s~~~l~~~df~~At~~~~~~g~~~~~~~~~g-----~s~~y--~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~ 232 (601)
T KOG0590|consen 160 SGSALKIADFGLATAYRNKNGAERSLKDRCG-----SSPPY--GAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDF 232 (601)
T ss_pred CCCcccCCCchhhccccccCCcceeeecccC-----CCCCC--CCcccccchhhcCCCcccccccccccccccCCCCccc
Confidence 88 899999999986655 333333322221 12223 22333 22 467888999999999988887532110
Q ss_pred ------------hhh----h-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 312 ------------DKE----L-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 312 ------------~~~----~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
+.. . .-..++......+.+++..+|..|.+.++-..+=
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~ 287 (601)
T KOG0590|consen 233 PSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDN 287 (601)
T ss_pred cccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccc
Confidence 000 1 1234566667889999999999998887765543
No 463
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=98.59 E-value=3.5e-07 Score=91.90 Aligned_cols=75 Identities=11% Similarity=0.169 Sum_probs=55.5
Q ss_pred ceecccCceeEEEEEeCC-------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 97 RQLGVGKESDIFEVARED-------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~-------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
..|..|-...||++...+ ++.+++|++..+...+. ...+|+.++..|...
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~-----------------------~r~~E~~~~~~l~~~ 60 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLI-----------------------DRERELVVFARLSER 60 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCccee-----------------------chHHHHHHHHHHHhC
Confidence 456667777999987654 57899999765432221 123699999999988
Q ss_pred CCCcceeeecCCceeEEeecCCCChh
Q 012042 170 GFPVPNAVDCNRHCVIMSLVQGYPLV 195 (472)
Q Consensus 170 gi~vP~~i~~~~~~LVMEyi~G~~L~ 195 (472)
|+ .|.++......+||||++|.++.
T Consensus 61 g~-~P~~~~~~~~~~v~e~i~G~~l~ 85 (302)
T cd05156 61 NL-GPKLYGIFPNGRIEEFIPSRTLT 85 (302)
T ss_pred CC-CCceEEEeCCCchhheeCCCcCC
Confidence 84 79988876677899999997764
No 464
>PRK10593 hypothetical protein; Provisional
Probab=98.55 E-value=8.7e-07 Score=89.56 Aligned_cols=74 Identities=12% Similarity=0.125 Sum_probs=56.2
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC-CCcc
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG-FPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g-i~vP 174 (472)
.+.||.|..+.||+....++ .+++|+.+..... ..+.+|+..|+.|...+ ++||
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~------------------------~~~~~Ea~~L~~L~~~~~vpVP 73 (297)
T PRK10593 19 VECISEQPYAALWALYDSQG-NPMPLMARSFSTP------------------------GVAQQEAWKLSMLARSGTVRMP 73 (297)
T ss_pred eeecCCccceeEEEEEcCCC-CEEEEEecccccc------------------------hHHHHHHHHHHHHccCCCCCcC
Confidence 36899999999999976656 4788886531110 12457999999998764 8999
Q ss_pred eeeec-------CCceeEEeecCCCCh
Q 012042 175 NAVDC-------NRHCVIMSLVQGYPL 194 (472)
Q Consensus 175 ~~i~~-------~~~~LVMEyi~G~~L 194 (472)
+++.. +..+||||+++|.++
T Consensus 74 ~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 74 TVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred cEEEEeccCCcCCCeEEEEeccCCEec
Confidence 99953 558999999999764
No 465
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=98.55 E-value=1.6e-06 Score=88.85 Aligned_cols=144 Identities=28% Similarity=0.439 Sum_probs=94.2
Q ss_pred HHHHHHHhCCc-eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHH
Q 012042 81 LAIKTLVNRGV-FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKE 159 (472)
Q Consensus 81 ~al~~l~~~~~-i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE 159 (472)
.+...+...++ +......|.+ ..-.||+....+|+. ++|+++.+.+. ....-|
T Consensus 15 ~~~~~l~~~~~g~~~~~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~~~~------------------------~~i~~e 68 (331)
T COG2334 15 EAAAALEAYHYGLDGSLRGLNS-EENSNFRVQTEDGRY-ILKIYRPGWTR------------------------AEIPFE 68 (331)
T ss_pred HHHHHHHhcCcCcccccccccc-ccCceEEEEecCCCe-EEEEecCCCCH------------------------HHHHHH
Confidence 34444544443 1222255656 788899998877776 99999865211 123468
Q ss_pred HHHHHHhhhCCCCcceeeec----------C--CceeEEeecCCCChhh-hh--------------c-----cC--ChH-
Q 012042 160 FAFMKALEDHGFPVPNAVDC----------N--RHCVIMSLVQGYPLVQ-VN--------------Q-----LQ--NPD- 204 (472)
Q Consensus 160 ~~~L~~L~~~gi~vP~~i~~----------~--~~~LVMEyi~G~~L~~-l~--------------~-----~~--~~~- 204 (472)
..+|..|...+++||.|+.. + +++-+.+|++|.++.. .. + .. .|.
T Consensus 69 l~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~ 148 (331)
T COG2334 69 LALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNA 148 (331)
T ss_pred HHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCc
Confidence 99999999999988888541 5 7888999999988772 10 0 00 000
Q ss_pred -----------------------HHHHHHHHHHHHHH--------HCC--ceeccCCCCcEEEcCCCc-EEEEeCCCcee
Q 012042 205 -----------------------SVFETIIGLVVRLA--------EHG--LIHCDFNEFNIMIDDDEK-VTMIDFPQMVS 250 (472)
Q Consensus 205 -----------------------~i~~qIl~aL~~LH--------~~G--IIHrDLKP~NILl~~~g~-vkIIDFG~A~~ 250 (472)
....++...+..+. ..| +||+|+.|.||+++++.. +.+|||+-|+.
T Consensus 149 ~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 149 LRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred ccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 01112233333332 234 999999999999997764 88999999873
No 466
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=98.52 E-value=1.3e-06 Score=87.55 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=48.2
Q ss_pred cccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcceeee
Q 012042 100 GVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVPNAVD 178 (472)
Q Consensus 100 G~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP~~i~ 178 (472)
++|-...||.+...+|..+++|+-+... . ...+.+|+++|..|... .+++|.++.
T Consensus 20 ~~g~~~~v~~i~~~~g~~~VlR~p~~~~-~-----------------------~~~l~rE~~vL~~L~~~l~vpvP~~~~ 75 (276)
T cd05152 20 ESGLDFQVVFAKDTDGVPWVLRIPRRPD-V-----------------------SERAAAEKRVLALVRKHLPVQVPDWRV 75 (276)
T ss_pred CCcceeEEEEEEcCCCCeEEEEecCCHH-H-----------------------HHHHHHHHHHHHHHHhcCCCCCCceee
Confidence 3444456666655568899999754211 0 11356899999999763 477777665
Q ss_pred cCCceeEEeecCCCChh
Q 012042 179 CNRHCVIMSLVQGYPLV 195 (472)
Q Consensus 179 ~~~~~LVMEyi~G~~L~ 195 (472)
.+..+++|+++.|.++.
T Consensus 76 ~~~~~~~y~~i~G~p~~ 92 (276)
T cd05152 76 HTPELIAYPKLPGVPAA 92 (276)
T ss_pred ecCceEEEeccCCCccc
Confidence 56667889999987664
No 467
>PLN02876 acyl-CoA dehydrogenase
Probab=98.47 E-value=2.1e-06 Score=98.19 Aligned_cols=97 Identities=20% Similarity=0.261 Sum_probs=65.4
Q ss_pred cccHHHHHHHHhCCce---e----eecceecccCceeEEEEEeCCC---CEEEEEEeecCcchhHHhhhhhHHhhhccch
Q 012042 77 GYDFLAIKTLVNRGVF---T----AVGRQLGVGKESDIFEVAREDG---TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSY 146 (472)
Q Consensus 77 g~d~~al~~l~~~~~i---~----~i~~~IG~G~fg~VY~a~~~~g---~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~ 146 (472)
++|.-+|..+...... . --...|+.|.+..+|+....++ ..+++|....+.....
T Consensus 17 ~~d~~~l~~~l~~~~~~~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~--------------- 81 (822)
T PLN02876 17 RFDEDALLRYAAANVAGFPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQS--------------- 81 (822)
T ss_pred cCCHHHHHHHHHHhCCCcCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCcc---------------
Confidence 4666677666553211 0 1246789999999999876543 4688886543321110
Q ss_pred hhHHHhHHHHHHHHHHHHHhh-hCCCCcceeeec-------CCceeEEeecCCCCh
Q 012042 147 NWLYLSRLAALKEFAFMKALE-DHGFPVPNAVDC-------NRHCVIMSLVQGYPL 194 (472)
Q Consensus 147 ~~~~~~r~~a~rE~~~L~~L~-~~gi~vP~~i~~-------~~~~LVMEyi~G~~L 194 (472)
...+.+|+.+|..|. +.++++|+++.. +..|+|||||+|..+
T Consensus 82 ------~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 82 ------AHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred ------HHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence 113458999999997 577999998874 468999999999753
No 468
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=98.42 E-value=2.4e-06 Score=85.75 Aligned_cols=62 Identities=16% Similarity=0.299 Sum_probs=45.0
Q ss_pred eEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeeec------
Q 012042 106 DIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC------ 179 (472)
Q Consensus 106 ~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~------ 179 (472)
.||++...+| .+++|++... .. .+..|+.++..|...|+++|.++..
T Consensus 11 ~v~~v~t~~g-~~~LK~~~~~---~~-----------------------~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~ 63 (313)
T TIGR02906 11 NVYKVETDSG-NKCLKKINYP---PE-----------------------RLLFILGAQEHLRKNGFNIPKILKTKDGELY 63 (313)
T ss_pred cEEEEEeCCC-CeEEEEcCCC---HH-----------------------HHHHHHHHHHHHHHcCCCCCceeecCCCCEE
Confidence 5999876555 6889976421 00 1234788899999999999998864
Q ss_pred ----CCceeEEeecCCCCh
Q 012042 180 ----NRHCVIMSLVQGYPL 194 (472)
Q Consensus 180 ----~~~~LVMEyi~G~~L 194 (472)
+..+++|+|++|.++
T Consensus 64 ~~~~~~~~~l~~~i~G~~~ 82 (313)
T TIGR02906 64 VKYNGDLYVLTEWIEGREC 82 (313)
T ss_pred EEECCEEEEEehhccCcCC
Confidence 346899999998654
No 469
>PRK11768 serine/threonine protein kinase; Provisional
Probab=98.39 E-value=3.4e-06 Score=86.34 Aligned_cols=71 Identities=23% Similarity=0.267 Sum_probs=52.2
Q ss_pred ccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeeec-
Q 012042 101 VGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC- 179 (472)
Q Consensus 101 ~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~- 179 (472)
.+....||+....+|..+++|+++.+..+. ..+..|+.++..|...|++||.|+..
T Consensus 35 ~s~eN~vy~v~~~~~~~~vlKv~r~~~~~~-----------------------~~i~~E~~~l~~L~~~gipv~~p~~~~ 91 (325)
T PRK11768 35 NSYENRVYQFGDEDGRRVVAKFYRPERWSD-----------------------AQILEEHAFALELAEAEIPVVAPLAFN 91 (325)
T ss_pred ccccceEEEEecCCCCEEEEEEcCcccCCH-----------------------HHHHHHHHHHHHHHHCCCCCCCCccCC
Confidence 455778999988788899999987553211 13446899999999989988876542
Q ss_pred --------CCceeEEeecCCCCh
Q 012042 180 --------NRHCVIMSLVQGYPL 194 (472)
Q Consensus 180 --------~~~~LVMEyi~G~~L 194 (472)
+..+.++++++|...
T Consensus 92 G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 92 GQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred CCEEEEECCEEEEEEeeeCCCCC
Confidence 345678899998653
No 470
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.33 E-value=7.2e-06 Score=86.16 Aligned_cols=82 Identities=20% Similarity=0.185 Sum_probs=54.4
Q ss_pred ceecccCceeEEEEEeCCC-CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcc
Q 012042 97 RQLGVGKESDIFEVAREDG-TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g-~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP 174 (472)
+.||.|.+..||++...+| +.|+||.-.+-... + ...|. ....+...|...|..+... ...+|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~---~-----------g~~wp-l~~eR~~~Eae~L~~l~~~~p~~VP 96 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRV---V-----------GESWP-LTLDRARIEAEALKIQAKYVPDLVP 96 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCccccc---c-----------ccccc-ccHHHHHHHHHHHHHHHhhCCCCCC
Confidence 6799999999999998776 58999974311000 0 00111 1122455688888887542 35689
Q ss_pred eeeecC--CceeEEeecCCCC
Q 012042 175 NAVDCN--RHCVIMSLVQGYP 193 (472)
Q Consensus 175 ~~i~~~--~~~LVMEyi~G~~ 193 (472)
.++.++ ..++||||+++..
T Consensus 97 kV~~~D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 97 KVYHYDEELAVTVMEDLSDHK 117 (401)
T ss_pred eEEEECCCCCEEEEecCCCcc
Confidence 998874 4699999998643
No 471
>PLN02236 choline kinase
Probab=98.14 E-value=2.3e-05 Score=80.84 Aligned_cols=129 Identities=18% Similarity=0.263 Sum_probs=83.8
Q ss_pred ceecccCceeEEEEEeCC-----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 97 RQLGVGKESDIFEVARED-----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~-----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
.+|-.|-.-.+|++...+ ++.|++|++..+...+.. -.+|+.++..+...|+
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-----------------------R~~E~~~~~~l~~~gl 98 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-----------------------RDDEIRTFECMSRHGQ 98 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-----------------------hHHHHHHHHHHHHcCC
Confidence 456567888899986432 368999988654322210 1369999999998887
Q ss_pred CcceeeecCCceeEEeecCCCChhhhh-----------------cc-C---Ch-HHHHHHH-------------------
Q 012042 172 PVPNAVDCNRHCVIMSLVQGYPLVQVN-----------------QL-Q---NP-DSVFETI------------------- 210 (472)
Q Consensus 172 ~vP~~i~~~~~~LVMEyi~G~~L~~l~-----------------~~-~---~~-~~i~~qI------------------- 210 (472)
.|.++.......|++|++|.++.... +. . .. ..++.++
T Consensus 99 -~P~~~~~~~~g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 177 (344)
T PLN02236 99 -GPRLLGRFPNGRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEF 177 (344)
T ss_pred -CCceEEEECCceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhc
Confidence 78888875556899999987764210 00 0 00 0111111
Q ss_pred -----HHHHHHH--------HHCCceeccCCCCcEEEcC-CCcEEEEeCCCce
Q 012042 211 -----IGLVVRL--------AEHGLIHCDFNEFNIMIDD-DEKVTMIDFPQMV 249 (472)
Q Consensus 211 -----l~aL~~L--------H~~GIIHrDLKP~NILl~~-~g~vkIIDFG~A~ 249 (472)
...+..| +...++|+|+++.|||+++ ++.++||||..|.
T Consensus 178 ~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 178 RLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 1111111 1236999999999999985 4679999999886
No 472
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.13 E-value=3.4e-06 Score=90.11 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=81.4
Q ss_pred CCceeEEeecCCCChhhhhccCC-------hHHHHHHHHHHHHHHHHCCc-eeccCCCCcEEEcCCCcEEEEeCCCceec
Q 012042 180 NRHCVIMSLVQGYPLVQVNQLQN-------PDSVFETIIGLVVRLAEHGL-IHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251 (472)
Q Consensus 180 ~~~~LVMEyi~G~~L~~l~~~~~-------~~~i~~qIl~aL~~LH~~GI-IHrDLKP~NILl~~~g~vkIIDFG~A~~~ 251 (472)
...++|.+||.-++|.+.+.... ...+.+.|+.+|.|+|.-.| .|+-|++.|.+++..-.+||.|||+....
T Consensus 20 ~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~ 99 (484)
T KOG1023|consen 20 PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLL 99 (484)
T ss_pred CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccc
Confidence 56678999999999998764321 12477899999999997765 99999999999999999999999987644
Q ss_pred Cc---ccchhhhccccchhhhhcccccccccccccc--------CCCCcchheeccCchhhhhhhcc
Q 012042 252 SH---QNAQMYFDRDVECIFKFFRKRFHLNFQETTD--------GDDGSDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 252 ~~---p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--------~~~~~~sDiySlG~~~f~~~t~~ 307 (472)
.. +.+.. .. .+.+=+.+++... ...+.+.|+||||+.+.+.++..
T Consensus 100 ~~~~~~~~~~-------~~----~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 100 EETAEPEAHH-------PI----RKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred cccccccccc-------hh----HHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 21 00000 00 0111111111111 23678899999999998888754
No 473
>PRK06148 hypothetical protein; Provisional
Probab=98.12 E-value=3e-05 Score=90.64 Aligned_cols=129 Identities=26% Similarity=0.471 Sum_probs=82.2
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC--CCCcc
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH--GFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~--gi~vP 174 (472)
..|+ |.+-.+|+....+|..+++|+++..... .....|..+|..|... ++++|
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~------------------------~~~~~q~~~L~hL~~~~~glpvP 85 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEPR------------------------VESDFQTAALDHLAAVAPDLPVP 85 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCccch------------------------hHHHHHHHHHHHHHhhCCCCCcC
Confidence 5564 3467889998778889999998754210 0123466788877654 79999
Q ss_pred eeeec-------------C--CceeEEeecCCCChhhhhc----------------------cCCh-------------H
Q 012042 175 NAVDC-------------N--RHCVIMSLVQGYPLVQVNQ----------------------LQNP-------------D 204 (472)
Q Consensus 175 ~~i~~-------------~--~~~LVMEyi~G~~L~~l~~----------------------~~~~-------------~ 204 (472)
.++.. + +.+-+|+|++|.++.+... ...+ .
T Consensus 86 ~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~ 165 (1013)
T PRK06148 86 RLIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAG 165 (1013)
T ss_pred eeeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccch
Confidence 98853 1 3466899999988765100 0000 0
Q ss_pred ---------------HHHHHHHHHHH-----HHH--HCCceeccCCCCcEEEcCCC--cEE-EEeCCCcee
Q 012042 205 ---------------SVFETIIGLVV-----RLA--EHGLIHCDFNEFNIMIDDDE--KVT-MIDFPQMVS 250 (472)
Q Consensus 205 ---------------~i~~qIl~aL~-----~LH--~~GIIHrDLKP~NILl~~~g--~vk-IIDFG~A~~ 250 (472)
.++.+++.... .+. ..++||+|+++.|||++.++ ++. |||||-+..
T Consensus 166 ~l~~~l~~i~d~~~r~~l~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 166 RARDRLHFIDDPEDRALVERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred hhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 01112222211 111 35799999999999999765 555 999998864
No 474
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.05 E-value=4.4e-06 Score=82.27 Aligned_cols=209 Identities=13% Similarity=0.103 Sum_probs=131.3
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..+|.+.-.|..|+|++. |..+++|++....-+.+. .| .+..|+..|+-+.|+++ .|.
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~ri---sr-----------------dfneefp~lrifshpni-lpv 252 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARI---SR-----------------DFNEEFPALRIFSHPNI-LPV 252 (448)
T ss_pred hhhhccCCCccccccccc-Ccchhhhhhhhhhcchhh---cc-----------------hhhhhCcceeeecCCch-hhh
Confidence 356788889999999885 567788887532211110 11 23357777776666542 121
Q ss_pred eeec---CCceeEEeecCCCChhhhhccC--------ChHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEcCCCcEEE
Q 012042 176 AVDC---NRHCVIMSLVQGYPLVQVNQLQ--------NPDSVFETIIGLVVRLAEHG--LIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 176 ~i~~---~~~~LVMEyi~G~~L~~l~~~~--------~~~~i~~qIl~aL~~LH~~G--IIHrDLKP~NILl~~~g~vkI 242 (472)
+-++ ....++..|++-++|+.++... ..-.++..+++++.|||+.. |.---|+...+||+++-..+|
T Consensus 253 lgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 253 LGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred hhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe
Confidence 1112 3467888999999999987543 23357889999999999763 334467889999998766554
Q ss_pred --EeCCCceecCcccchhhhccccchhhhhccccccccccccccC---CCCcchheeccCchhhhhhhccCCcchh----
Q 012042 243 --IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG---DDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 243 --IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~---~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.|--++- .+..+.+.+ -.++|+.+... .--..+|.|||.+.+.++.|..-++-+.
T Consensus 333 smad~kfsf---------------qe~gr~y~p-awmspealqrkped~n~raadmwsfaillwel~trevpfadlspme 396 (448)
T KOG0195|consen 333 SMADTKFSF---------------QEVGRAYSP-AWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME 396 (448)
T ss_pred ecccceeee---------------eccccccCc-ccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh
Confidence 2322211 112222222 12333332111 1223589999998888888864333221
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.-.++|++..+..++.-|+..+|.+||.-
T Consensus 397 cgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkf 436 (448)
T KOG0195|consen 397 CGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKF 436 (448)
T ss_pred hhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCc
Confidence 11358999999999999999999999864
No 475
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.05 E-value=6.9e-06 Score=88.12 Aligned_cols=225 Identities=16% Similarity=0.104 Sum_probs=140.4
Q ss_pred eecceecccCceeEEEEEe--CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR--EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~--~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
.+...||.|.|+.||.+.. .++..|++|-...+...+.. .+....|+-+...|..+ .
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~--------------------di~sl~ev~l~~~l~~~-~ 326 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFAS--------------------DIFSLGEVILEAILGSH-L 326 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHh--------------------hhcchhhhhHhhHhhcc-c
Confidence 3347899999999999865 35778999966544333321 11223455555555432 2
Q ss_pred Ccce----eeecCCceeEEeecCCCChhhhh------ccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC-CcE
Q 012042 172 PVPN----AVDCNRHCVIMSLVQGYPLVQVN------QLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD-EKV 240 (472)
Q Consensus 172 ~vP~----~i~~~~~~LVMEyi~G~~L~~l~------~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~-g~v 240 (472)
++++ .......||--|||.|+++.... +......+..+++.++.++|+..++|+|++|.||++..+ +..
T Consensus 327 ~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 327 PSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred ccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhh
Confidence 2222 11124567888999987754432 111223467789999999999999999999999999865 667
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc--------ch
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF--------LD 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~--------l~ 312 (472)
++.|||.++.+.- .......+. +.|-..+...-...+..+.|+||||.+..+.++...-. +.
T Consensus 407 ~~~~~~~~t~~~~------~~~~~~~~~----r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~ 476 (524)
T KOG0601|consen 407 KLGDFGCWTRLAF------SSGVFHHID----RLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIR 476 (524)
T ss_pred hccccccccccce------ecccccccc----cccccchhhccccccccccccccccccccccccCcccCcccccceeee
Confidence 8999998864321 000111111 11111111112456778899999999988888753210 00
Q ss_pred hh--hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 313 KE--LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 313 ~~--~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.. ....++...++.+...++.+++.-|++..+...-.
T Consensus 477 ~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 477 SGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred cccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 01 11234457778889999999999999988876544
No 476
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=98.04 E-value=4.6e-05 Score=77.76 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=29.9
Q ss_pred CCceeccCCCCcEEEcCCCcEEEEeCCCceecCccc
Q 012042 220 HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQN 255 (472)
Q Consensus 220 ~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~ 255 (472)
..++|||+++.|||+++++.+-|+||+.+. +.+|.
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~-lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELAT-LGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccc-cCCcH
Confidence 359999999999999988889999999985 45553
No 477
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=98.02 E-value=2.5e-05 Score=74.52 Aligned_cols=112 Identities=19% Similarity=0.271 Sum_probs=64.4
Q ss_pred CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeeecCCceeEEeecCCCCh
Q 012042 115 GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 115 g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L 194 (472)
++.|+|+++..++..+.. -..|..+++.+...|+ .|.++.......|++|++|.+|
T Consensus 2 ~~~~~~Ri~g~~t~~~id-----------------------r~~E~~~~~~l~~~g~-~p~~~~~~~~g~v~e~i~g~~l 57 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFID-----------------------RENENEALKLLSEAGL-GPKIIYFFENGRVEEFIEGRTL 57 (211)
T ss_dssp TSEEEEEEEESCGCSHHH-----------------------HHHHHHHHHHHHHTTS-SS-EEEEETTEEEEE--SSEE-
T ss_pred CCEEEEEeCCCCcccccC-----------------------HHHHHHHHHHHHHcCC-CCeEEEEcCCCcEEEEeccccc
Confidence 467999998766544421 2368999999988765 6888888777789999998775
Q ss_pred hhh--hc------------------c---CChHHHHH-----------------------------HHHHHHHHHH----
Q 012042 195 VQV--NQ------------------L---QNPDSVFE-----------------------------TIIGLVVRLA---- 218 (472)
Q Consensus 195 ~~l--~~------------------~---~~~~~i~~-----------------------------qIl~aL~~LH---- 218 (472)
... .. . .....++. .+...+..+.
T Consensus 58 ~~~~~~~~~~~~~iA~~l~~lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~ 137 (211)
T PF01633_consen 58 SPEDFRNPEILKRIAKLLAKLHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLE 137 (211)
T ss_dssp -CGGGGSHHHHHHHHHHHHHHHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhccChHHHHHHHHHHHHHhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhh
Confidence 331 00 0 00000111 1111222221
Q ss_pred ----HCCceeccCCCCcEEE-cCCCcEEEEeCCCcee
Q 012042 219 ----EHGLIHCDFNEFNIMI-DDDEKVTMIDFPQMVS 250 (472)
Q Consensus 219 ----~~GIIHrDLKP~NILl-~~~g~vkIIDFG~A~~ 250 (472)
...++|+||.|.|||+ ..++.+++|||-.|..
T Consensus 138 ~~~~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 138 KSNSPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp TSCGGEEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred ccCCCceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 1359999999999999 6788999999999864
No 478
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.02 E-value=9.8e-05 Score=70.57 Aligned_cols=142 Identities=18% Similarity=0.281 Sum_probs=89.4
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC---C
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG---F 171 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g---i 171 (472)
..+||+|+.-.||. +++.....||+.+... .... ...+.+.....+. .......+|+.....+. ..+ .
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~-~~~~-~~~~~~~k~~~~~----~~~~~~~~E~~~y~~l~~~~~~~~~ 77 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDR-GERR-RPFKRWLKRLRPK----SRYRQNRRELRYYKQLSLRRGVDWS 77 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEcccc-cccc-ccchhHHHhhccc----chhHHHHHHHHHHHHHhhccCCccc
Confidence 36799999999995 5667778999998654 1100 0011111100000 01123456777666666 443 3
Q ss_pred Ccceeeec----CCceeEEeecC---C---CChhhhhccC-ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC--C
Q 012042 172 PVPNAVDC----NRHCVIMSLVQ---G---YPLVQVNQLQ-NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD--E 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~---G---~~L~~l~~~~-~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~--g 238 (472)
++|++++. ....+|+|.|. | .+|.+++... ....+...+-+...+|.+++|+.+|++|.||++... +
T Consensus 78 ~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~ 157 (199)
T PF10707_consen 78 HIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTEELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSG 157 (199)
T ss_pred ccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccHHHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCC
Confidence 46776664 45688999885 2 3566665332 233566666677788999999999999999999732 2
Q ss_pred --cEEEEeC
Q 012042 239 --KVTMIDF 245 (472)
Q Consensus 239 --~vkIIDF 245 (472)
.++|||-
T Consensus 158 ~~~lvlIDG 166 (199)
T PF10707_consen 158 EFRLVLIDG 166 (199)
T ss_pred ceEEEEEeC
Confidence 5889984
No 479
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=98.00 E-value=6.3e-05 Score=77.18 Aligned_cols=75 Identities=15% Similarity=0.216 Sum_probs=52.5
Q ss_pred ceecccCceeEEEEEeCC----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 97 RQLGVGKESDIFEVARED----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.+|..|=.-.+|++...+ +..|++|+...+...+- .-.+|+.+++.+...|+
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~I-----------------------dR~~E~~il~~l~~~gl- 75 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVI-----------------------DRERELQAIKYLSAAGF- 75 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEe-----------------------chHHHHHHHHHHHhcCC-
Confidence 566667788899886532 34899998865432211 01369999999998886
Q ss_pred cceeeecCCceeEEeecCCCChh
Q 012042 173 VPNAVDCNRHCVIMSLVQGYPLV 195 (472)
Q Consensus 173 vP~~i~~~~~~LVMEyi~G~~L~ 195 (472)
.|.++......++.+|++|.+|.
T Consensus 76 ~P~~l~~~~~G~i~~fi~g~~l~ 98 (330)
T PLN02421 76 GAKLLGVFGNGMIQSFINARTLT 98 (330)
T ss_pred CCceeEEeCCcEeehhhcCCCCC
Confidence 48888765555799999987763
No 480
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.97 E-value=5.3e-06 Score=83.67 Aligned_cols=159 Identities=13% Similarity=0.065 Sum_probs=101.1
Q ss_pred CCceeEEeecCCCChhhhhccC----------ChHHHHHHHHHHHHHHHHC--CceeccCCCCcEEEcCCCcEEEEeCCC
Q 012042 180 NRHCVIMSLVQGYPLVQVNQLQ----------NPDSVFETIIGLVVRLAEH--GLIHCDFNEFNIMIDDDEKVTMIDFPQ 247 (472)
Q Consensus 180 ~~~~LVMEyi~G~~L~~l~~~~----------~~~~i~~qIl~aL~~LH~~--GIIHrDLKP~NILl~~~g~vkIIDFG~ 247 (472)
.+.+++.||+.-+.|.+.+... ....++.||+.+|.|||++ -|+|+.+.-.-|.+..+|-|+| |.
T Consensus 145 ~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIki---g~ 221 (458)
T KOG1266|consen 145 PRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI---GS 221 (458)
T ss_pred cceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEe---cc
Confidence 4567899999999988875321 2346899999999999976 5999999999999998876664 33
Q ss_pred cee-cCcccchhhhc--cccc-hhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCC--------cchhhh
Q 012042 248 MVS-VSHQNAQMYFD--RDVE-CIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAG--------FLDKEL 315 (472)
Q Consensus 248 A~~-~~~p~a~~~l~--rD~~-~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~--------~l~~~~ 315 (472)
... ..||.+..... +.+. .+..|+++.||- ..+.+..+|||+||.-.+++...... ..+..+
T Consensus 222 ~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~------~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~i 295 (458)
T KOG1266|consen 222 VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGT------TTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENI 295 (458)
T ss_pred cCccccchhhhhhhHhhhhccccCCccccCCcCc------ccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhh
Confidence 322 23554432111 1111 122334444443 34578899999999444554332110 011111
Q ss_pred h--ccCCCHHHH-HHHHHHHhcCcccCCCCCCCCC
Q 012042 316 A--ASGFTRKDQ-DVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 316 ~--~~~~s~~~~-~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .-+.+..++ ..|.++++.+|..||++.++.=
T Consensus 296 a~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 296 ANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred hhheeeccCccccCcCcccccCCCCCCcchhhhhc
Confidence 1 123344444 6889999999999999998754
No 481
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.94 E-value=7e-06 Score=88.09 Aligned_cols=223 Identities=15% Similarity=0.144 Sum_probs=139.8
Q ss_pred eeecceecc--cCceeEEEEEe---CCCCEEEEEEeecCc-chhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGV--GKESDIFEVAR---EDGTVLAMKLHRLGR-TSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~--G~fg~VY~a~~---~~g~~VAVKi~r~~~-~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
..+...+|. |.+|.||.+.. .++..+|+|.-.... ..+... + -.+|+....++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~---~------------------k~~~~~s~~~i 174 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSK---R------------------KLREFLSHHKI 174 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccc---c------------------ccchhhccccc
Confidence 344678899 99999999987 368889999643211 111111 0 11344444333
Q ss_pred hhCCCCcceeee-------cCCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHH----HHHHHHHCCceeccCC
Q 012042 167 EDHGFPVPNAVD-------CNRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIG----LVVRLAEHGLIHCDFN 228 (472)
Q Consensus 167 ~~~gi~vP~~i~-------~~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~----aL~~LH~~GIIHrDLK 228 (472)
..+ +.++. -+..++-.|+|. ..|....... .| ...+.+... ++..+|..+++|-|+|
T Consensus 175 ~~~----~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~k 249 (524)
T KOG0601|consen 175 DSH----ENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLK 249 (524)
T ss_pred Ccc----ccccccCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccc
Confidence 322 22222 256777788886 4554442211 12 235666666 9999999999999999
Q ss_pred CCcEEEcCC-CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhcc
Q 012042 229 EFNIMIDDD-EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 229 P~NILl~~~-g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~ 307 (472)
|.||.+..+ ...+++|||+...+...+-.... .+..+-++ ..-|...+...+.++...|+|++|-+..+.+++.
T Consensus 250 p~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~----~~~~r~~~-~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~ 324 (524)
T KOG0601|consen 250 PANIFTTSDWTSCKLTDFGLVSKISDGNFSSVF----KVSKRPEG-DCIYAAKELLNGLATFASDIFSLGEVILEAILGS 324 (524)
T ss_pred hhheecccccceeecCCcceeEEccCCccccce----eeeecCCC-CceEeChhhhccccchHhhhcchhhhhHhhHhhc
Confidence 999999988 77899999999877644311111 11111011 1123444446788999999999999988877643
Q ss_pred CCc----------chh----hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 308 AGF----------LDK----ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 308 ~~~----------l~~----~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+ ++. .-.+.+.+.++.-.+..|++.++--|++.+..-
T Consensus 325 ~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 325 HLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred ccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 211 010 112456777777888999999998887766553
No 482
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.82 E-value=0.0002 Score=72.20 Aligned_cols=71 Identities=14% Similarity=0.207 Sum_probs=45.6
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh-CCCCcc
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED-HGFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~-~gi~vP 174 (472)
...|+.|....+|+.. .+++.+.||+....... .+..|+.-|+.|.. ..+.||
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~-------------------------~f~~Ea~gL~~L~~~~~~~vP 75 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRD-------------------------MFEGEAEGLKALAEANPIRVP 75 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCC-------------------------HHHHHHHHHHHHCHTTTSBS-
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecChhhHH-------------------------HHHHHHHHHHHHHhcCCCCCC
Confidence 3678889999999986 56889999987522111 24569999999954 458899
Q ss_pred eeeec----CCceeEEeecCCC
Q 012042 175 NAVDC----NRHCVIMSLVQGY 192 (472)
Q Consensus 175 ~~i~~----~~~~LVMEyi~G~ 192 (472)
+|+.+ +..+|||||++..
T Consensus 76 ~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 76 KVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp -EEEEEE-SSCCEEEEE-----
T ss_pred eEEEEEeecCCceEEEEeecCC
Confidence 99985 4679999999855
No 483
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.81 E-value=6.1e-05 Score=78.46 Aligned_cols=139 Identities=10% Similarity=0.267 Sum_probs=86.4
Q ss_pred ceecccCceeEEEEEeC----------------CCCEEEEEEeecCcchhH-----HhhhhhHHhhhccchhhHH-----
Q 012042 97 RQLGVGKESDIFEVARE----------------DGTVLAMKLHRLGRTSFR-----AVKSKRDYLRHRNSYNWLY----- 150 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~----------------~g~~VAVKi~r~~~~sf~-----~~k~~r~yl~~~~~~~~~~----- 150 (472)
.+||+|.-++||+|... ..+.||||+..++..... -++.-...+..-+..+|+.
T Consensus 195 ~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~v 274 (565)
T KOG1236|consen 195 EPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEV 274 (565)
T ss_pred cccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchH
Confidence 68999999999999631 124699999876543221 1111111112222333432
Q ss_pred -------HhHHHHHHHHHHHHHhhhC-----CCCcceeeec--CCceeEEeecCCCChhhhhcc-CChHHHHHHH----H
Q 012042 151 -------LSRLAALKEFAFMKALEDH-----GFPVPNAVDC--NRHCVIMSLVQGYPLVQVNQL-QNPDSVFETI----I 211 (472)
Q Consensus 151 -------~~r~~a~rE~~~L~~L~~~-----gi~vP~~i~~--~~~~LVMEyi~G~~L~~l~~~-~~~~~i~~qI----l 211 (472)
.......+|...|.+.... .+..|.|+.. ...+|+-+|..|.++...+.. ..|+.+...+ .
T Consensus 275 kqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~ 354 (565)
T KOG1236|consen 275 KQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGV 354 (565)
T ss_pred HHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHH
Confidence 1234455677777776432 2456777764 667777789999998887543 4565544444 3
Q ss_pred HHHHHHH-HCCceeccCCCCcEEEc
Q 012042 212 GLVVRLA-EHGLIHCDFNEFNIMID 235 (472)
Q Consensus 212 ~aL~~LH-~~GIIHrDLKP~NILl~ 235 (472)
.++-.|. -.+++|.|++|.||++.
T Consensus 355 ~AllkMl~vDNFvHaDlHPGNVlir 379 (565)
T KOG1236|consen 355 NALLKMLIVDNFVHADLHPGNVLIR 379 (565)
T ss_pred HHHHHHHHhhcceecccCCCcEEEE
Confidence 4554443 45899999999999995
No 484
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=97.77 E-value=0.00019 Score=72.70 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=27.7
Q ss_pred CceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 221 GLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 221 GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
|++|+|+.+.|||+++++.+.||||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999888899999998863
No 485
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.77 E-value=9.2e-05 Score=76.71 Aligned_cols=78 Identities=21% Similarity=0.263 Sum_probs=49.7
Q ss_pred eecccCceeEEEEEeCCC-CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC--Ccc
Q 012042 98 QLGVGKESDIFEVAREDG-TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF--PVP 174 (472)
Q Consensus 98 ~IG~G~fg~VY~a~~~~g-~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi--~vP 174 (472)
.||-|....||++.+++| +.|+||.-.+ |++-- ..+|. +...++..|...|...... . .+|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp-------------~vRv~-g~~wp-l~~~R~~~E~~~L~~~~~~-~P~~vP 65 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALP-------------YVRVV-GESWP-LTLDRARIESSALIRQGEH-VPHLVP 65 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCH-------------HHhhc-CCCCC-CCccHHHHHHHHHHHhhcc-CccccC
Confidence 479999999999998654 6899996421 11100 00111 1223455688888776542 3 388
Q ss_pred eeeec--CCceeEEeecCC
Q 012042 175 NAVDC--NRHCVIMSLVQG 191 (472)
Q Consensus 175 ~~i~~--~~~~LVMEyi~G 191 (472)
+++.+ ..+.+|||+++.
T Consensus 66 ~vy~~D~e~~~~vMEdL~~ 84 (370)
T TIGR01767 66 RIFHFDTEMAVTVMEDLSH 84 (370)
T ss_pred eEEEEccccceehHhhCcc
Confidence 88876 456799999863
No 486
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.74 E-value=1.6e-05 Score=89.06 Aligned_cols=120 Identities=11% Similarity=-0.005 Sum_probs=82.4
Q ss_pred eeccCCCC-cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhh
Q 012042 223 IHCDFNEF-NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 223 IHrDLKP~-NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
.|++..|. |+++.+.+.+++.|||.++......+.. .-..+.++..+++|+...+..++.++||||||+++|
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~-------~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ 571 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPV-------EGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLF 571 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhcccccc-------cCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHH
Confidence 55667776 6666777777889999987653222111 011234555556777666777999999999999999
Q ss_pred hhhhccCCcch-------hhhh---------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 302 ASISKTAGFLD-------KELA---------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 302 ~~~t~~~~~l~-------~~~~---------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
+++++...+.. ..+. ...+...+..++.+||..+|++||++.+-..-.
T Consensus 572 ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~ 635 (669)
T cd05610 572 EFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635 (669)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhCH
Confidence 99997543211 0010 124566778899999999999999999887643
No 487
>PRK06149 hypothetical protein; Provisional
Probab=97.69 E-value=0.0003 Score=82.13 Aligned_cols=73 Identities=18% Similarity=0.375 Sum_probs=48.1
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC--CCCcc
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH--GFPVP 174 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~--gi~vP 174 (472)
..|+.+ .-.+|+....++ .+++|+++..... .....|..+|..|... ++++|
T Consensus 37 ~~L~s~-~d~nf~v~t~~~-~yVLKi~~~~~~~------------------------~~l~~e~~~l~hL~~~~~glpvp 90 (972)
T PRK06149 37 TELGSQ-QDRNFRVDSDGG-RFVLKICHAAYAA------------------------VELEAQHAALRHLAEREPALRVP 90 (972)
T ss_pred EecCCc-CcceEEEEecCC-cEEEEeCCccCCh------------------------HHHHHHHHHHHHHHhhCCCCCCc
Confidence 455433 346898876544 6888998743211 0133577788888776 89999
Q ss_pred eeeec--------------CCceeEEeecCCCChh
Q 012042 175 NAVDC--------------NRHCVIMSLVQGYPLV 195 (472)
Q Consensus 175 ~~i~~--------------~~~~LVMEyi~G~~L~ 195 (472)
.++.. ...+-+++|++|.++.
T Consensus 91 ~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~ 125 (972)
T PRK06149 91 VVIPALDGEELLTLDVRGQGLRVRLLDYLPGQPLT 125 (972)
T ss_pred eeeECCCCCeEEEEecCCceEEEEEEEecCCcccc
Confidence 98863 2246689999996653
No 488
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.68 E-value=0.00037 Score=73.45 Aligned_cols=80 Identities=13% Similarity=0.109 Sum_probs=51.4
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcc
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP 174 (472)
.+.||-|....||+..+. +..|+||.-.+..... ..+|.. ...+...|+..|..+... .++||
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~v--------------ga~wpl-~~~R~~~Ea~aL~~~~~~~p~~VP 100 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCI--------------GESWPM-TKERAYFEATALREHGRLCPDHVP 100 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCC--------------CccccC-CccHHHHHHHHHHHhhhcCCCCCC
Confidence 367899999999998774 5579999754221100 001110 112334577777776532 26789
Q ss_pred eeeecC--CceeEEeecCC
Q 012042 175 NAVDCN--RHCVIMSLVQG 191 (472)
Q Consensus 175 ~~i~~~--~~~LVMEyi~G 191 (472)
+++.++ ..+++|||+++
T Consensus 101 kVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 101 EVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred eEEEECCCCCEEEEeecCC
Confidence 998874 48999999987
No 489
>PTZ00384 choline kinase; Provisional
Probab=97.66 E-value=0.0005 Score=72.10 Aligned_cols=75 Identities=16% Similarity=0.253 Sum_probs=51.0
Q ss_pred ceecccCceeEEEEEeCCC--CE-----EEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 97 RQLGVGKESDIFEVAREDG--TV-----LAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g--~~-----VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
.+|..|-...+|++...++ .. |+++++..+..-+. .-.+|+.++..|...
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~I-----------------------dR~~E~~i~~~Ls~~ 112 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVI-----------------------DNDLQYNIAKLLGDN 112 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEe-----------------------ccHHHHHHHHHHHhC
Confidence 5666788889999976432 22 44444322211110 013699999999887
Q ss_pred CCCcceeeecCCceeEEeecCCCChh
Q 012042 170 GFPVPNAVDCNRHCVIMSLVQGYPLV 195 (472)
Q Consensus 170 gi~vP~~i~~~~~~LVMEyi~G~~L~ 195 (472)
|+ .|.++.....+++.|||+|.+|.
T Consensus 113 gl-gP~l~~~f~~g~l~efIeGr~l~ 137 (383)
T PTZ00384 113 NF-GPKIIGRFGDFTIQEWVEGNTMG 137 (383)
T ss_pred CC-CCeEEEecCCEEEEEEeccccCC
Confidence 64 79999988889999999998764
No 490
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.61 E-value=0.00028 Score=74.03 Aligned_cols=80 Identities=21% Similarity=0.205 Sum_probs=52.5
Q ss_pred cceecccCceeEEEEEeCC-CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC-CCc
Q 012042 96 GRQLGVGKESDIFEVARED-GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG-FPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~-g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g-i~v 173 (472)
...||-|.-.-||++.+.+ ++.|+||.-. .|++ -..+|. +...++..|..+|+.+.... -.|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAl-------------p~vR--v~~swp-L~~~R~~~E~~aL~~~~~~~P~~V 97 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAG-------------DTAR--ISDEFK-LSTNRIRIESDVLQLEEELAPGLV 97 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEecc-------------Hhhc--cCCCCC-CChHHHHHHHHHHHHHHhhCCCcC
Confidence 3688999999999998753 5689999632 1121 011221 23345667888888775521 238
Q ss_pred ceeeec--CCceeEEeecCC
Q 012042 174 PNAVDC--NRHCVIMSLVQG 191 (472)
Q Consensus 174 P~~i~~--~~~~LVMEyi~G 191 (472)
|+++.+ ..+.+|||+++.
T Consensus 98 P~vy~~D~e~~~~vMEdL~~ 117 (409)
T PRK12396 98 PKVYLFDSVMNCCVMEDLSD 117 (409)
T ss_pred CeEEEECcHHhhHHHHhCcc
Confidence 888876 456899999863
No 491
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.61 E-value=0.00067 Score=65.00 Aligned_cols=139 Identities=17% Similarity=0.199 Sum_probs=82.7
Q ss_pred eeecceecccCc-eeEEEEEeCCCCEEEEEEee---cCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKE-SDIFEVAREDGTVLAMKLHR---LGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~f-g~VY~a~~~~g~~VAVKi~r---~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
.+..+.||.|.. |.||++.. +|+.+|||+++ ...+.+.. ..+........-...-..-+..|++...+|.+
T Consensus 39 I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 39 IEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTR----ERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred EeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCcccc----ccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 344688999999 99999976 57899999943 21111100 00000000000000000134467777777765
Q ss_pred CCCC---cceeeec----------------------CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCce
Q 012042 169 HGFP---VPNAVDC----------------------NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLI 223 (472)
Q Consensus 169 ~gi~---vP~~i~~----------------------~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GII 223 (472)
.+-. ..+.+++ ....||.||++... .....-+.+|.+-|..+|..||+
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------~~~~~~~~~~~~dl~~~~k~gI~ 186 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------PLQIRDIPQMLRDLKILHKLGIV 186 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------ccchhHHHHHHHHHHHHHHCCee
Confidence 4410 1222211 11357788877544 12234577888999999999999
Q ss_pred eccCCCCcEEEcCCCcEEEEeCCCc
Q 012042 224 HCDFNEFNIMIDDDEKVTMIDFPQM 248 (472)
Q Consensus 224 HrDLKP~NILl~~~g~vkIIDFG~A 248 (472)
-+|+++.|.. +| +|+|||.+
T Consensus 187 ~~Dv~~~ny~---~G--~lvDfs~~ 206 (207)
T PF13095_consen 187 PRDVKPRNYR---GG--KLVDFSSS 206 (207)
T ss_pred eccCcccccc---CC--EEEecccC
Confidence 9999999997 33 79999975
No 492
>PTZ00296 choline kinase; Provisional
Probab=97.55 E-value=0.00088 Score=71.56 Aligned_cols=75 Identities=17% Similarity=0.266 Sum_probs=55.2
Q ss_pred ceecccCceeEEEEEeCC---------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 97 RQLGVGKESDIFEVARED---------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~---------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
.+|..|-.-.+|++...+ ++.|+++++-.++..+.. -.+|..++..|.
T Consensus 111 ~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lId-----------------------R~~E~~v~~~ls 167 (442)
T PTZ00296 111 NQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYN-----------------------PISEFEVYKTMS 167 (442)
T ss_pred EEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeC-----------------------HHHHHHHHHHHH
Confidence 567777777888887532 468999998665544421 125899999998
Q ss_pred hCCCCcceeeecCCceeEEeecCCCChh
Q 012042 168 DHGFPVPNAVDCNRHCVIMSLVQGYPLV 195 (472)
Q Consensus 168 ~~gi~vP~~i~~~~~~LVMEyi~G~~L~ 195 (472)
..|+ .|.+++....+.+.+|++|.+|.
T Consensus 168 ~~gi-~P~l~~~f~gg~I~efi~g~~l~ 194 (442)
T PTZ00296 168 KYRI-APQLLNTFSGGRIEEWLYGDPLR 194 (442)
T ss_pred HCCC-CCceEEEeCCCEEEEeeCCccCC
Confidence 8876 68888877778899999998653
No 493
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.47 E-value=0.00039 Score=65.81 Aligned_cols=93 Identities=18% Similarity=0.276 Sum_probs=73.8
Q ss_pred HHHHHHHHHhhhCCCCcceeeecCCceeEEeecCCCCh-------hhhhccC--ChHHHHHHHHHHHHHHHH---CCcee
Q 012042 157 LKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPL-------VQVNQLQ--NPDSVFETIIGLVVRLAE---HGLIH 224 (472)
Q Consensus 157 ~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L-------~~l~~~~--~~~~i~~qIl~aL~~LH~---~GIIH 224 (472)
..|+-+|+.|.+.. ++|+.++.-..++|.||++.+++ .++.... ....++.++++.+.+++. ..+.-
T Consensus 7 ~~E~lll~~l~~~~-~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~l 85 (188)
T PF12260_consen 7 NNEPLLLQLLQGSE-PFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYL 85 (188)
T ss_pred ccHHHHHHHcCCCC-CCCCeeeECCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 35899999998865 78999999888889999996644 3433211 223588899999999975 45888
Q ss_pred ccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 225 CDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 225 rDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
.|++|.|+-++++|+++++|...+..
T Consensus 86 cDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 86 CDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred eecchHHeEEeCCCcEEEEechhcch
Confidence 99999999999999999999998753
No 494
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=97.46 E-value=0.0011 Score=72.49 Aligned_cols=154 Identities=15% Similarity=0.104 Sum_probs=97.8
Q ss_pred CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeeec-------CCceeE
Q 012042 113 EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC-------NRHCVI 185 (472)
Q Consensus 113 ~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~-------~~~~LV 185 (472)
.++.+|.|.++..... .|. ..+.+-+..|+.|+| |+++.+ +..|||
T Consensus 35 ~~~~~vsVF~~~~~~~------------------~~~----~~~~~A~k~lKtlRH-----P~Il~yL~t~e~~~~~ylv 87 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNG------------------EVT----ELAKRAVKRLKTLRH-----PNILSYLDTTEEEGTLYLV 87 (690)
T ss_pred ccCCceEEEEEeCCCc------------------hhh----HHHHHHHHHhhhccC-----chhhhhhhhhcccCceEEE
Confidence 5788999998865432 011 123345677888887 555543 678999
Q ss_pred EeecCCCChhhhhccCC---hHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhc
Q 012042 186 MSLVQGYPLVQVNQLQN---PDSVFETIIGLVVRLA-EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFD 261 (472)
Q Consensus 186 MEyi~G~~L~~l~~~~~---~~~i~~qIl~aL~~LH-~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~ 261 (472)
.|-|. ||...+.... ..--+.||+.||.+|| +++++|+.+.-.-|.|+..|.-+|.+|-.+...+.-++ ..
T Consensus 88 TErV~--Pl~~~lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---~~ 162 (690)
T KOG1243|consen 88 TERVR--PLETVLKELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---PA 162 (690)
T ss_pred eeccc--cHHHHHHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---cc
Confidence 99884 5544332211 1235789999999997 78999999999999999999999999988765443222 11
Q ss_pred cccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc
Q 012042 262 RDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 262 rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
+....+..|. .+.-+.|. +.-.|.|.||+.+.+...+
T Consensus 163 ~~~~~~~s~~-~P~~~~~s-------~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 163 KSLYLIESFD-DPEEIDPS-------EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccchhhhccc-ChhhcCcc-------ccchhhhhHHHHHHHHhCc
Confidence 1222222111 11111111 1346888899888777765
No 495
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=97.29 E-value=0.00071 Score=67.04 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=52.1
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHH---HHHHHhhhCCCC
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEF---AFMKALEDHGFP 172 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~---~~L~~L~~~gi~ 172 (472)
...+-.|..|.|+.++..+|.++++|+..+.... ..|. ..|......|
T Consensus 7 ~~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~---------------------------~~E~~g~~~L~~w~G~G-- 57 (253)
T PF04655_consen 7 DGPPAHGSSSLVVPVRRADGTPAVLKLAPPHAEA---------------------------EHEARGEAALRWWNGRG-- 57 (253)
T ss_pred CCCCCCCcceEEEEEEcCCCCeEEEEecCCcccc---------------------------hhhhhHHhHhheeCCCC--
Confidence 3556789999999999999999999997643211 1233 5566666555
Q ss_pred cceeeecC--CceeEEeec-CCCChhhhh
Q 012042 173 VPNAVDCN--RHCVIMSLV-QGYPLVQVN 198 (472)
Q Consensus 173 vP~~i~~~--~~~LVMEyi-~G~~L~~l~ 198 (472)
..+++... ...++||.+ +|.+|..+.
T Consensus 58 aVrll~~d~~~~AlLLErl~~g~~L~~~~ 86 (253)
T PF04655_consen 58 AVRLLAADPERGALLLERLDPGRSLASLP 86 (253)
T ss_pred ceeeeccccccchhhhhhccCCCchhhcc
Confidence 35777765 788999999 566776543
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.20 E-value=0.0004 Score=76.21 Aligned_cols=139 Identities=9% Similarity=0.090 Sum_probs=93.1
Q ss_pred HHHHHHHHHHH-CCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhcccc-chhhhhcccccccccccc-ccC
Q 012042 209 TIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDV-ECIFKFFRKRFHLNFQET-TDG 285 (472)
Q Consensus 209 qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~-~~i~~~f~~~y~~~~~~~-~~~ 285 (472)
++..++.++|+ .++||+.|.|.+|.++..+..||+.|++++....|.. |.-.+. ..+.-+..+...+..+++ ...
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--YPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--cccccCCCCCChhhccCcccccchhhccc
Confidence 44488899995 5899999999999999999999999999986654332 111111 112222333344444443 457
Q ss_pred CCCcchheeccCchhhhhhhccCCc-------c----hh---hh----hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 286 DDGSDIDTDEGSRLSFASISKTAGF-------L----DK---EL----AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 286 ~~~~~sDiySlG~~~f~~~t~~~~~-------l----~~---~~----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+..+|+||+|+.++..-.+.... + .. .. ....+..++.+-|.+++..++.-||+..+...
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 7889999999998876554221110 0 00 01 12456788999999999999999997766665
Q ss_pred CC
Q 012042 348 DG 349 (472)
Q Consensus 348 ~~ 349 (472)
.-
T Consensus 265 ~~ 266 (700)
T KOG2137|consen 265 IP 266 (700)
T ss_pred cc
Confidence 44
No 497
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.04 E-value=0.0019 Score=73.89 Aligned_cols=167 Identities=13% Similarity=0.072 Sum_probs=111.5
Q ss_pred CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecC-
Q 012042 180 NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVS- 252 (472)
Q Consensus 180 ~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~- 252 (472)
...+|+|+|..|+.|...++.. .+......+.....+||...++|+|++|.|+++..++...+.|||......
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccc
Confidence 4578999999998887765432 123356677888999999999999999999999999999999998432211
Q ss_pred ---------ccc-----------chhhhccc-cchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 253 ---------HQN-----------AQMYFDRD-VECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 253 ---------~p~-----------a~~~l~rD-~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
+.+ ....+..| ...-...+++.-+..|++..+..-+...|.|++|+.+|+.+++..++-
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 000 00111111 000112233333445666678888999999999999999999754321
Q ss_pred h----h--------hhh----ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 D----K--------ELA----ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 ~----~--------~~~----~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. + .+. +--.+.+.+..+..++..++.+|-.+--..
T Consensus 1037 a~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~ 1087 (1205)
T KOG0606|consen 1037 AETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAA 1087 (1205)
T ss_pred CcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCccccc
Confidence 1 0 011 122566678899999999999886655333
No 498
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=96.94 E-value=0.0042 Score=65.20 Aligned_cols=189 Identities=20% Similarity=0.180 Sum_probs=102.4
Q ss_pred CceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 90 GVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
|.+...+..||+|+.+.+|-.-. -...+-|++.........- +...+.......-.. .+=..-+..|+..
T Consensus 10 ge~i~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aq--k~a~la~~p~~p~~~------~rvaWPqa~L~G~ 79 (637)
T COG4248 10 GEPIPPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQ--KVAELAATPDAPLLN------YRVAWPQATLHGG 79 (637)
T ss_pred CcccCCCccccCCccceeeecch--hhchhheeecCCCchHHHH--HHHHhccCCCCcchh------hhhcccHHHhhCC
Confidence 44456789999999999996533 2345678886544332211 111111110000000 0000001111110
Q ss_pred CCCcceeeecCCceeEEeecCCC-Chhhhhc-----cCCh-------HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 170 GFPVPNAVDCNRHCVIMSLVQGY-PLVQVNQ-----LQNP-------DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 170 gi~vP~~i~~~~~~LVMEyi~G~-~L~~l~~-----~~~~-------~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ .....-+.|-.+.|. ++..+.. ...| ..+.+.++.+...||.+|.+-||+++.|+||++
T Consensus 80 ~-------~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd 152 (637)
T COG4248 80 R-------RGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSD 152 (637)
T ss_pred C-------ccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeec
Confidence 0 001245778888774 2322221 1112 136678888999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc------ccCCCCcchheeccCchhhhhhhc
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET------TDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~------~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
++.|+|+|-..-.... +. ++..|- ++.. .+.|++. .+...+..+|.+.+|+.+|+++.+
T Consensus 153 ~~~V~LVdsDsfqi~~--ng-----~~~~cp---Vg~~-eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~g 217 (637)
T COG4248 153 DSKVVLVDSDSFQINA--NG-----TLHLCP---VGVS-EFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFG 217 (637)
T ss_pred CceEEEEcccceeecc--CC-----ceEecc---cCcc-ccCCHHHhccccccccCCCccccchhHHHHHHHHHhc
Confidence 9999999876433211 11 111110 0111 1122221 234456778999999999998886
No 499
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=96.89 E-value=0.00055 Score=68.01 Aligned_cols=156 Identities=17% Similarity=0.206 Sum_probs=98.8
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHH--hhhhhHHhhh---ccchhhHHHhHH----------HHHHHHH
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRA--VKSKRDYLRH---RNSYNWLYLSRL----------AALKEFA 161 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~--~k~~r~yl~~---~~~~~~~~~~r~----------~a~rE~~ 161 (472)
.+..--+.|+|++|+..+|..||||+..++...-.. +.+....+.- .+.--++...-. ..++|..
T Consensus 55 ~P~AaASIGQVHrArl~~g~eVavKiQYPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~ 134 (363)
T KOG1234|consen 55 GPFAAASIGQVHRARLADGPEVAVKIQYPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAA 134 (363)
T ss_pred CccccccHHHHHHHHhcCCCeeeeecCCCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHH
Confidence 344455778999999999999999998776532221 1111111100 001111111111 1445666
Q ss_pred HHHHhh-----hCCCCcceeeec--CCceeEEeecCCCChhhhhccC--ChHHHHHHHHH-HHHHHHHCCceeccCCCCc
Q 012042 162 FMKALE-----DHGFPVPNAVDC--NRHCVIMSLVQGYPLVQVNQLQ--NPDSVFETIIG-LVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 162 ~L~~L~-----~~gi~vP~~i~~--~~~~LVMEyi~G~~L~~l~~~~--~~~~i~~qIl~-aL~~LH~~GIIHrDLKP~N 231 (472)
...+.. ++++.||.++.. ....+.||++.|.++....... ....|...++. .|..+..-.++.-|.+-.|
T Consensus 135 ~~~kFr~LLs~~p~f~VP~Vv~Elct~rvlt~el~~G~pid~~~~~sQ~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsN 214 (363)
T KOG1234|consen 135 SALKFRPLLSDDPNFYVPRVVDELCTVRVLTLELGQGLPIDKTAKLSQETRNYIGYKLLELCLREIFEFRFMQTDPNWSN 214 (363)
T ss_pred HHhhhHHHhcCCCCcchhHHHHhhccchhhhhhhhcCccchhhhcccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHH
Confidence 665543 456778888873 7788999999999998764322 12235555543 4556667779999999999
Q ss_pred EEEcC-CCcEEEEeCCCceecC
Q 012042 232 IMIDD-DEKVTMIDFPQMVSVS 252 (472)
Q Consensus 232 ILl~~-~g~vkIIDFG~A~~~~ 252 (472)
.|.+. ..++.|+|||.++...
T Consensus 215 Fly~~~tk~i~LlDFGAsr~y~ 236 (363)
T KOG1234|consen 215 FLYNGRTKKIELLDFGASREYG 236 (363)
T ss_pred hccCCCcceEEEEecccccccc
Confidence 99984 4569999999998764
No 500
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.83 E-value=0.00079 Score=71.20 Aligned_cols=57 Identities=12% Similarity=0.213 Sum_probs=42.5
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
-++||+|||-|+...+. |..|+.. +.|. +|+..++..|++-.|||||.+.+|++.|+
T Consensus 391 i~vKIaDlGNACW~~kh-----FT~DIQT------RQYR-apEVllGsgY~~~ADiWS~AC~~FELaTG 447 (590)
T KOG1290|consen 391 IRVKIADLGNACWVHKH-----FTEDIQT------RQYR-APEVLLGSGYSTSADIWSTACMAFELATG 447 (590)
T ss_pred eeEEEeeccchhhhhhh-----hchhhhh------hhcc-CcceeecCCCCCchhHHHHHHHHHHhhcC
Confidence 46999999999865432 2334332 3343 55566788899999999999999999996
Done!