Query 012042
Match_columns 472
No_of_seqs 465 out of 2861
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 20:28:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gyi_A RIO2 kinase; protein ki 100.0 1E-66 3.5E-71 539.8 22.2 322 1-337 2-341 (397)
2 1zar_A RIO2 kinase; serine kin 100.0 1.1E-48 3.7E-53 388.5 19.7 270 3-280 2-271 (282)
3 4b9d_A Serine/threonine-protei 100.0 1.7E-38 5.7E-43 325.1 14.0 224 93-347 26-276 (350)
4 4fih_A Serine/threonine-protei 100.0 2.3E-38 8E-43 323.5 12.6 223 92-347 75-323 (346)
5 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.5E-38 1.9E-42 316.4 13.0 226 93-346 34-283 (311)
6 4fie_A Serine/threonine-protei 100.0 1.5E-37 5E-42 325.3 14.9 224 92-348 152-401 (423)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-37 5.4E-42 316.3 12.2 222 92-346 59-308 (336)
8 3hyh_A Carbon catabolite-derep 100.0 4.3E-37 1.5E-41 305.0 13.9 222 93-346 15-261 (275)
9 3fpq_A Serine/threonine-protei 100.0 1.1E-36 3.6E-41 304.3 14.7 224 90-347 25-282 (290)
10 4g31_A Eukaryotic translation 100.0 1.1E-36 3.9E-41 305.0 13.6 232 93-347 7-279 (299)
11 3ubd_A Ribosomal protein S6 ki 100.0 4.9E-37 1.7E-41 308.7 6.6 221 93-344 26-273 (304)
12 4asz_A BDNF/NT-3 growth factor 100.0 3E-36 1E-40 302.2 12.0 221 93-345 15-280 (299)
13 3omv_A RAF proto-oncogene seri 100.0 7.1E-36 2.4E-40 300.6 13.8 221 94-345 39-291 (307)
14 4aoj_A High affinity nerve gro 100.0 1E-35 3.4E-40 302.1 14.1 221 94-345 44-310 (329)
15 4gt4_A Tyrosine-protein kinase 100.0 2.2E-35 7.5E-40 297.0 14.0 222 94-345 29-297 (308)
16 4b99_A Mitogen-activated prote 100.0 8.3E-35 2.8E-39 302.7 16.0 228 92-347 55-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 5.1E-34 1.8E-38 292.9 15.6 229 92-346 22-351 (361)
18 4ase_A Vascular endothelial gr 100.0 1.9E-34 6.6E-39 295.5 11.6 226 92-346 65-339 (353)
19 3hmm_A TGF-beta receptor type- 100.0 1.5E-34 5.2E-39 289.7 6.8 223 93-346 5-289 (303)
20 3uto_A Twitchin; kinase, muscl 100.0 7.5E-33 2.6E-37 300.4 15.2 221 93-347 159-410 (573)
21 1zth_A RIO1 serine protein kin 100.0 5.5E-32 1.9E-36 264.3 17.4 209 65-279 18-246 (258)
22 3v5w_A G-protein coupled recep 100.0 2.1E-32 7.2E-37 299.9 15.4 219 93-343 191-440 (689)
23 3fxz_A Serine/threonine-protei 100.0 8.6E-32 3E-36 266.7 13.8 223 93-348 22-270 (297)
24 3fe3_A MAP/microtubule affinit 100.0 3.9E-31 1.3E-35 266.9 14.2 224 93-348 17-265 (328)
25 3s95_A LIMK-1, LIM domain kina 100.0 6.7E-31 2.3E-35 260.4 15.4 231 93-347 12-275 (310)
26 3qd2_B Eukaryotic translation 100.0 5E-31 1.7E-35 261.6 13.9 232 93-347 8-325 (332)
27 3zgw_A Maternal embryonic leuc 100.0 6.5E-31 2.2E-35 267.9 13.8 224 93-347 12-260 (347)
28 4eqm_A Protein kinase; transfe 100.0 1.5E-30 5.2E-35 257.1 14.9 223 93-344 13-264 (294)
29 3p86_A Serine/threonine-protei 100.0 2E-30 6.8E-35 258.8 15.7 224 92-347 38-291 (309)
30 2zv2_A Calcium/calmodulin-depe 100.0 1.3E-30 4.5E-35 256.8 14.2 243 93-346 15-291 (298)
31 3niz_A Rhodanese family protei 100.0 1.7E-30 5.9E-35 259.0 15.0 224 92-347 22-300 (311)
32 2acx_A G protein-coupled recep 100.0 3E-31 1E-35 287.6 10.4 285 28-343 117-435 (576)
33 3o0g_A Cell division protein k 100.0 1.2E-30 4E-35 256.4 13.6 224 93-347 4-282 (292)
34 1tki_A Titin; serine kinase, m 100.0 8.6E-31 2.9E-35 263.1 12.9 220 93-347 7-257 (321)
35 3ugc_A Tyrosine-protein kinase 100.0 1.2E-30 4.1E-35 256.4 13.5 224 93-346 12-283 (295)
36 2bdw_A Hypothetical protein K1 100.0 2.2E-30 7.4E-35 264.7 15.7 223 93-347 31-284 (362)
37 2c30_A Serine/threonine-protei 100.0 2E-30 6.7E-35 260.0 14.5 223 93-348 47-295 (321)
38 2yab_A Death-associated protei 100.0 1.6E-30 5.4E-35 266.3 14.1 228 93-348 14-273 (361)
39 2y0a_A Death-associated protei 100.0 2.6E-30 9.1E-35 259.6 14.9 228 93-348 13-272 (326)
40 1o6l_A RAC-beta serine/threoni 100.0 2.7E-30 9.2E-35 262.1 15.1 220 93-342 7-250 (337)
41 3soa_A Calcium/calmodulin-depe 100.0 2.4E-30 8.3E-35 272.3 15.2 226 93-349 13-269 (444)
42 3ork_A Serine/threonine protei 100.0 9E-31 3.1E-35 260.2 10.6 228 93-347 14-273 (311)
43 3c0i_A Peripheral plasma membr 100.0 1.6E-30 5.5E-35 264.0 12.6 228 92-347 25-286 (351)
44 3oz6_A Mitogen-activated prote 100.0 3.3E-30 1.1E-34 264.4 14.7 233 93-348 11-329 (388)
45 4hcu_A Tyrosine-protein kinase 100.0 2.4E-30 8.1E-35 251.0 12.7 220 93-345 12-257 (269)
46 1csn_A Casein kinase-1; phosph 100.0 5.8E-30 2E-34 250.9 15.5 227 93-347 12-276 (298)
47 1ob3_A PFPK5, cell division co 100.0 1.9E-30 6.7E-35 254.7 12.2 223 93-347 4-280 (288)
48 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.5E-30 1.2E-34 262.9 14.0 221 93-343 25-270 (353)
49 3nsz_A CK II alpha, casein kin 100.0 1.1E-29 3.6E-34 253.3 16.7 218 93-347 38-319 (330)
50 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-29 3.8E-34 248.6 16.3 228 92-347 10-273 (296)
51 1xjd_A Protein kinase C, theta 100.0 6.6E-30 2.3E-34 260.2 15.0 222 93-344 19-265 (345)
52 3kk8_A Calcium/calmodulin depe 100.0 7.3E-30 2.5E-34 248.8 14.6 223 93-347 8-261 (284)
53 3tki_A Serine/threonine-protei 100.0 3.8E-30 1.3E-34 258.3 12.8 227 93-349 9-263 (323)
54 3gni_B Strad alpha; kinase fol 100.0 7.4E-30 2.5E-34 261.6 15.2 234 90-348 24-334 (389)
55 4dc2_A Protein kinase C IOTA t 100.0 6.4E-30 2.2E-34 265.5 14.8 221 93-343 54-308 (396)
56 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.1E-30 1.4E-34 248.9 12.5 222 93-347 10-257 (268)
57 3kn6_A Ribosomal protein S6 ki 100.0 1E-29 3.6E-34 255.4 15.8 217 96-348 16-271 (325)
58 2psq_A Fibroblast growth facto 100.0 1.1E-29 3.7E-34 260.1 16.0 226 92-347 82-357 (370)
59 3a62_A Ribosomal protein S6 ki 100.0 1E-29 3.6E-34 255.3 15.4 223 92-343 18-267 (327)
60 4agu_A Cyclin-dependent kinase 100.0 7.7E-30 2.6E-34 252.2 14.2 224 93-347 5-284 (311)
61 3llt_A Serine/threonine kinase 100.0 9.9E-30 3.4E-34 257.1 15.3 219 93-347 37-355 (360)
62 4hgt_A Casein kinase I isoform 100.0 1.2E-29 4.1E-34 248.0 15.4 228 92-347 10-273 (296)
63 1fot_A TPK1 delta, CAMP-depend 100.0 1E-29 3.6E-34 255.4 15.1 218 93-343 8-249 (318)
64 4fr4_A YANK1, serine/threonine 100.0 1.3E-29 4.4E-34 262.1 16.2 220 93-343 17-266 (384)
65 3gen_A Tyrosine-protein kinase 100.0 4.8E-30 1.6E-34 250.3 12.2 221 93-346 26-272 (283)
66 1qpc_A LCK kinase; alpha beta 100.0 1.5E-29 5.1E-34 246.3 15.6 222 92-346 14-261 (279)
67 2izr_A Casein kinase I isoform 100.0 7E-30 2.4E-34 255.8 13.6 225 93-347 11-274 (330)
68 3kul_A Ephrin type-A receptor 100.0 6.3E-30 2.2E-34 256.7 13.3 227 92-347 50-306 (325)
69 3a8x_A Protein kinase C IOTA t 100.0 8.6E-30 3E-34 258.8 14.3 221 93-343 11-265 (345)
70 3g33_A Cell division protein k 100.0 1.8E-29 6.1E-34 249.9 16.1 225 93-347 11-296 (308)
71 4euu_A Serine/threonine-protei 100.0 6.6E-30 2.3E-34 254.5 13.0 225 92-349 10-304 (319)
72 3hko_A Calcium/calmodulin-depe 100.0 8.3E-30 2.8E-34 255.6 13.5 231 93-347 28-330 (345)
73 2a19_B Interferon-induced, dou 100.0 8.2E-30 2.8E-34 247.7 13.0 217 93-347 13-267 (284)
74 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-29 3.5E-34 258.9 14.2 218 93-343 43-284 (350)
75 3p1a_A MYT1 kinase, membrane-a 100.0 1.8E-29 6.3E-34 251.3 15.7 221 93-347 59-304 (311)
76 4aaa_A Cyclin-dependent kinase 100.0 1.7E-29 5.8E-34 253.2 15.4 225 92-347 26-306 (331)
77 2y7j_A Phosphorylase B kinase 100.0 1.7E-29 5.7E-34 258.1 15.6 229 93-345 96-357 (365)
78 2w4o_A Calcium/calmodulin-depe 100.0 6.9E-30 2.4E-34 259.3 12.2 219 93-347 55-305 (349)
79 3dbq_A Dual specificity protei 100.0 1.3E-29 4.6E-34 255.7 14.2 229 90-347 8-273 (343)
80 3n9x_A Phosphotransferase; mal 100.0 1.8E-29 6.2E-34 263.6 15.7 232 93-347 28-361 (432)
81 2a2a_A Death-associated protei 100.0 1.1E-29 3.8E-34 253.4 13.4 227 93-347 14-272 (321)
82 3rp9_A Mitogen-activated prote 100.0 1.8E-29 6E-34 264.7 15.5 190 93-305 55-279 (458)
83 3byv_A Rhoptry kinase; malaria 100.0 2.2E-30 7.7E-35 264.9 8.3 221 92-347 74-359 (377)
84 1nxk_A MAP kinase-activated pr 100.0 2E-29 6.8E-34 261.1 15.5 213 96-347 67-321 (400)
85 3fdn_A Serine/threonine-protei 100.0 6E-30 2.1E-34 249.5 10.9 223 93-347 11-257 (279)
86 2pmi_A Negative RE, cyclin-dep 100.0 9.7E-30 3.3E-34 254.0 12.6 223 93-348 7-294 (317)
87 3vhe_A Vascular endothelial gr 100.0 9.2E-30 3.1E-34 256.6 12.5 226 90-345 21-346 (359)
88 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-29 5.1E-34 258.0 14.2 224 92-347 63-352 (371)
89 1x8b_A WEE1HU, WEE1-like prote 100.0 2.5E-29 8.5E-34 243.8 14.9 220 93-347 13-279 (289)
90 2qkw_B Protein kinase; three-h 100.0 8.6E-30 2.9E-34 253.9 12.0 223 93-346 41-307 (321)
91 3uc3_A Serine/threonine-protei 100.0 1.2E-29 4.1E-34 259.0 13.2 221 92-347 21-274 (361)
92 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.4E-30 2.5E-34 258.9 11.5 224 93-348 11-259 (336)
93 2buj_A Serine/threonine-protei 100.0 2.6E-29 8.9E-34 249.1 15.1 233 91-347 29-299 (317)
94 3cok_A Serine/threonine-protei 100.0 1.2E-29 4.1E-34 246.9 12.3 226 93-348 13-263 (278)
95 3a7i_A MST3 kinase, serine/thr 100.0 2.7E-29 9.3E-34 247.7 14.9 224 92-347 23-270 (303)
96 3kfa_A Tyrosine-protein kinase 100.0 7.9E-30 2.7E-34 249.1 10.7 222 93-347 15-264 (288)
97 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-29 7.7E-34 244.8 13.7 220 93-347 11-261 (277)
98 3t9t_A Tyrosine-protein kinase 100.0 1.4E-29 4.9E-34 244.2 12.1 220 93-345 10-255 (267)
99 1rjb_A FL cytokine receptor; k 100.0 2.2E-29 7.4E-34 252.8 13.9 226 92-347 46-327 (344)
100 2x4f_A Myosin light chain kina 100.0 1.4E-29 4.6E-34 260.0 12.7 220 94-347 92-342 (373)
101 2ivs_A Proto-oncogene tyrosine 100.0 1.8E-29 6.2E-34 249.2 13.1 224 92-345 24-302 (314)
102 1mp8_A Focal adhesion kinase 1 100.0 1.7E-29 5.7E-34 246.9 12.7 223 92-345 16-267 (281)
103 2qr7_A Ribosomal protein S6 ki 100.0 9.9E-30 3.4E-34 258.1 11.4 218 93-347 24-277 (342)
104 2eue_A Carbon catabolite derep 100.0 1.7E-29 5.9E-34 245.7 12.5 223 93-347 15-262 (275)
105 2ac3_A MAP kinase-interacting 100.0 1.1E-29 3.6E-34 251.7 11.1 230 93-348 14-296 (316)
106 1cm8_A Phosphorylated MAP kina 100.0 5.1E-29 1.8E-33 254.8 16.3 221 92-347 26-307 (367)
107 3i6u_A CDS1, serine/threonine- 100.0 3.2E-29 1.1E-33 260.9 15.1 231 93-347 137-399 (419)
108 1kob_A Twitchin; kinase, intra 100.0 2.5E-29 8.4E-34 259.9 14.0 222 93-348 53-305 (387)
109 3op5_A Serine/threonine-protei 100.0 2.9E-29 9.9E-34 255.2 14.3 240 92-347 36-322 (364)
110 3is5_A Calcium-dependent prote 100.0 4.2E-29 1.4E-33 245.1 15.0 221 93-347 24-278 (285)
111 2zmd_A Dual specificity protei 100.0 3.2E-29 1.1E-33 258.6 14.8 229 90-347 55-320 (390)
112 2i0e_A Protein kinase C-beta I 100.0 2.3E-29 7.8E-34 257.0 13.4 221 93-343 22-267 (353)
113 1luf_A Muscle-specific tyrosin 100.0 1.8E-29 6.1E-34 252.6 12.4 225 92-346 48-327 (343)
114 2ycf_A Serine/threonine-protei 100.0 3.6E-29 1.2E-33 249.5 14.6 230 93-348 12-275 (322)
115 3ttj_A Mitogen-activated prote 100.0 3.3E-29 1.1E-33 264.7 15.1 225 93-349 64-357 (464)
116 4fvq_A Tyrosine-protein kinase 100.0 1.5E-29 5E-34 247.3 11.4 218 93-347 10-268 (289)
117 3tt0_A Basic fibroblast growth 100.0 4.9E-29 1.7E-33 255.6 15.8 226 92-347 70-345 (382)
118 2yex_A Serine/threonine-protei 100.0 4.9E-29 1.7E-33 241.6 14.8 226 93-348 9-262 (276)
119 2jam_A Calcium/calmodulin-depe 100.0 4.8E-29 1.6E-33 246.4 14.9 220 93-347 11-261 (304)
120 4e5w_A Tyrosine-protein kinase 100.0 1.3E-29 4.3E-34 249.3 10.7 224 93-345 23-293 (302)
121 2x7f_A TRAF2 and NCK-interacti 100.0 4.4E-29 1.5E-33 248.3 14.7 222 92-347 25-286 (326)
122 4ejn_A RAC-alpha serine/threon 100.0 5.9E-30 2E-34 268.0 8.7 219 93-341 150-393 (446)
123 2w5a_A Serine/threonine-protei 100.0 3.1E-29 1E-33 243.8 13.1 226 93-349 8-269 (279)
124 1t46_A HOMO sapiens V-KIT hard 100.0 3.5E-29 1.2E-33 247.0 13.6 225 92-346 24-299 (313)
125 1t4h_A Serine/threonine-protei 100.0 5.8E-29 2E-33 243.8 15.1 225 89-347 24-282 (290)
126 2rku_A Serine/threonine-protei 100.0 7.4E-29 2.5E-33 243.6 15.8 227 92-348 16-266 (294)
127 1qcf_A Haematopoetic cell kina 100.0 1.8E-29 6.2E-34 265.2 12.2 220 93-346 190-436 (454)
128 3dls_A PAS domain-containing s 100.0 2.3E-29 7.8E-34 254.1 12.3 231 93-349 26-276 (335)
129 3l9p_A Anaplastic lymphoma kin 100.0 1.8E-29 6.2E-34 258.0 11.6 225 93-347 73-338 (367)
130 3dtc_A Mitogen-activated prote 100.0 3.1E-29 1.1E-33 242.7 12.7 221 93-345 9-264 (271)
131 3uim_A Brassinosteroid insensi 100.0 1.5E-29 5.2E-34 252.0 10.8 232 85-347 24-304 (326)
132 3mtl_A Cell division protein k 100.0 1.3E-29 4.6E-34 253.7 10.4 224 93-349 4-283 (324)
133 4f0f_A Serine/threonine-protei 100.0 3.9E-29 1.3E-33 244.4 13.4 224 93-345 21-280 (287)
134 2wqm_A Serine/threonine-protei 100.0 6.9E-29 2.4E-33 245.6 15.2 224 93-346 34-289 (310)
135 3lxl_A Tyrosine-protein kinase 100.0 2.8E-29 9.5E-34 250.9 12.4 225 93-347 25-296 (327)
136 1ua2_A CAK, cell division prot 100.0 3.8E-29 1.3E-33 252.6 13.5 229 92-349 11-293 (346)
137 2h34_A Serine/threonine-protei 100.0 3.8E-29 1.3E-33 248.5 13.3 224 93-345 36-287 (309)
138 3f66_A Hepatocyte growth facto 100.0 7.5E-29 2.5E-33 243.6 15.1 228 91-346 25-283 (298)
139 3com_A Serine/threonine-protei 100.0 6.9E-29 2.4E-33 245.7 15.0 222 92-348 30-279 (314)
140 2b9h_A MAP kinase FUS3, mitoge 100.0 6.6E-29 2.3E-33 249.8 14.9 232 93-348 13-306 (353)
141 2owb_A Serine/threonine-protei 100.0 6.9E-29 2.3E-33 249.7 14.9 228 92-349 42-293 (335)
142 3qyz_A Mitogen-activated prote 100.0 9.9E-29 3.4E-33 251.3 16.1 227 92-348 28-314 (364)
143 2r5t_A Serine/threonine-protei 100.0 2.6E-29 9E-34 258.5 11.9 223 93-345 40-287 (373)
144 3bhy_A Death-associated protei 100.0 5.1E-29 1.7E-33 242.7 13.3 227 93-347 7-265 (283)
145 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-28 3.9E-33 265.9 17.4 224 92-345 186-441 (543)
146 3q4u_A Activin receptor type-1 100.0 1.5E-29 5E-34 248.4 9.4 220 93-345 10-293 (301)
147 3lb7_A RAF proto-oncogene seri 100.0 5.6E-29 1.9E-33 247.8 13.8 223 93-346 38-292 (307)
148 2v62_A Serine/threonine-protei 100.0 5.8E-29 2E-33 251.2 14.1 240 92-347 38-321 (345)
149 1u5q_A Serine/threonine protei 100.0 5.1E-29 1.8E-33 253.2 13.7 220 93-347 56-305 (348)
150 2vgo_A Serine/threonine-protei 100.0 2.8E-29 9.4E-34 245.4 11.3 223 93-347 16-262 (284)
151 3kvw_A DYRK2, dual specificity 100.0 6.8E-29 2.3E-33 259.4 14.8 180 93-308 99-297 (429)
152 2y94_A 5'-AMP-activated protei 100.0 4.7E-29 1.6E-33 264.9 13.8 224 93-347 18-266 (476)
153 3lxp_A Non-receptor tyrosine-p 100.0 5.9E-29 2E-33 248.1 13.7 225 93-346 33-302 (318)
154 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.3E-29 8E-34 252.5 10.8 223 93-347 36-318 (329)
155 1zy4_A Serine/threonine-protei 100.0 5.8E-29 2E-33 243.2 13.3 230 93-347 8-283 (303)
156 2qol_A Ephrin receptor; recept 100.0 2.5E-29 8.6E-34 257.8 11.2 226 93-347 47-302 (373)
157 3eqc_A Dual specificity mitoge 100.0 2.7E-29 9.3E-34 254.2 11.2 221 93-347 35-324 (360)
158 3v8s_A RHO-associated protein 100.0 5.3E-29 1.8E-33 259.6 13.5 228 91-347 69-329 (410)
159 3og7_A AKAP9-BRAF fusion prote 100.0 5.8E-29 2E-33 244.3 13.1 223 93-346 26-280 (289)
160 2pvf_A Fibroblast growth facto 100.0 1E-28 3.6E-33 247.7 15.1 226 92-347 36-311 (334)
161 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-29 7.3E-34 258.1 10.2 222 93-345 116-365 (377)
162 3pls_A Macrophage-stimulating 100.0 1.7E-28 5.9E-33 240.4 16.2 229 91-347 21-280 (298)
163 3cc6_A Protein tyrosine kinase 100.0 6.2E-29 2.1E-33 242.5 12.9 223 93-346 14-265 (281)
164 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-28 4.8E-33 250.0 16.0 222 91-344 65-328 (365)
165 2i6l_A Mitogen-activated prote 100.0 4.8E-29 1.6E-33 246.0 12.3 224 93-347 13-305 (320)
166 3nyv_A Calmodulin-domain prote 100.0 3.9E-29 1.3E-33 263.9 12.2 223 93-347 28-281 (484)
167 3soc_A Activin receptor type-2 100.0 9.1E-30 3.1E-34 254.7 6.9 222 92-346 25-310 (322)
168 2xir_A Vascular endothelial gr 100.0 7.2E-29 2.5E-33 245.1 13.3 225 92-346 28-302 (316)
169 3lm5_A Serine/threonine-protei 100.0 8.1E-29 2.8E-33 248.3 13.6 225 93-348 30-288 (327)
170 3qup_A Tyrosine-protein kinase 100.0 5.3E-29 1.8E-33 247.8 12.2 227 92-347 24-291 (323)
171 2h6d_A 5'-AMP-activated protei 100.0 8.3E-29 2.8E-33 240.4 13.2 224 93-347 13-261 (276)
172 1p4o_A Insulin-like growth fac 100.0 5.7E-29 2E-33 247.1 12.4 226 92-347 26-292 (322)
173 1u59_A Tyrosine-protein kinase 100.0 7.8E-29 2.7E-33 242.9 13.1 227 92-347 11-265 (287)
174 2j7t_A Serine/threonine-protei 100.0 3.4E-29 1.2E-33 246.2 10.6 224 92-348 20-276 (302)
175 2fst_X Mitogen-activated prote 100.0 6.5E-29 2.2E-33 254.4 13.0 220 93-347 31-311 (367)
176 2xrw_A Mitogen-activated prote 100.0 1.5E-28 5.1E-33 251.1 15.4 222 93-347 27-318 (371)
177 1vzo_A Ribosomal protein S6 ki 100.0 3E-29 1E-33 255.0 10.1 222 93-342 56-311 (355)
178 3mi9_A Cell division protein k 100.0 6.3E-29 2.1E-33 250.7 12.4 230 93-349 19-313 (351)
179 1phk_A Phosphorylase kinase; g 100.0 1.6E-28 5.5E-33 240.9 14.7 229 93-347 19-283 (298)
180 2eva_A TAK1 kinase - TAB1 chim 100.0 1.9E-28 6.4E-33 243.6 15.3 216 93-347 10-256 (307)
181 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.1E-29 2.1E-33 261.2 12.4 221 93-347 186-433 (452)
182 1z57_A Dual specificity protei 100.0 1.4E-28 4.8E-33 244.3 14.3 220 93-348 16-329 (339)
183 3coi_A Mitogen-activated prote 100.0 2.7E-28 9.1E-33 246.6 16.5 221 93-348 26-306 (353)
184 3mwu_A Calmodulin-domain prote 100.0 6E-29 2E-33 263.1 12.2 222 93-347 24-276 (486)
185 2nru_A Interleukin-1 receptor- 100.0 8.4E-29 2.9E-33 244.3 12.3 228 89-345 29-297 (307)
186 4exu_A Mitogen-activated prote 100.0 3.2E-28 1.1E-32 248.6 17.1 221 93-348 44-324 (371)
187 1opk_A P150, C-ABL, proto-onco 100.0 5.9E-29 2E-33 264.6 12.0 222 93-347 222-471 (495)
188 3eb0_A Putative uncharacterize 100.0 1E-28 3.6E-33 253.1 13.3 219 92-349 8-323 (383)
189 3kex_A Receptor tyrosine-prote 100.0 6.1E-29 2.1E-33 248.7 11.1 222 93-347 15-269 (325)
190 2r3i_A Cell division protein k 100.0 7.9E-29 2.7E-33 243.3 11.6 223 93-347 5-283 (299)
191 2i1m_A Macrophage colony-stimu 100.0 8E-29 2.7E-33 247.5 11.8 224 92-346 47-318 (333)
192 3lij_A Calcium/calmodulin depe 100.0 1.1E-28 3.8E-33 261.7 13.4 223 92-347 38-291 (494)
193 2vd5_A DMPK protein; serine/th 100.0 1.6E-28 5.5E-33 256.1 14.3 225 92-346 62-326 (412)
194 1xbb_A Tyrosine-protein kinase 100.0 8.8E-29 3E-33 242.9 11.5 225 93-345 18-270 (291)
195 3sv0_A Casein kinase I-like; t 100.0 2.6E-28 9E-33 259.6 15.9 227 93-347 9-271 (483)
196 2w1i_A JAK2; chromosomal rearr 100.0 1E-28 3.6E-33 246.9 12.1 224 92-345 42-313 (326)
197 3g2f_A Bone morphogenetic prot 100.0 2.1E-29 7.3E-34 251.7 7.0 228 93-347 15-311 (336)
198 3q5i_A Protein kinase; CDPK, m 100.0 1.5E-28 5.1E-33 261.4 13.8 233 93-347 38-301 (504)
199 4aw2_A Serine/threonine-protei 100.0 1.3E-28 4.5E-33 258.7 13.2 227 92-347 75-338 (437)
200 3poz_A Epidermal growth factor 100.0 7.9E-29 2.7E-33 248.4 11.0 225 93-347 17-271 (327)
201 2jii_A Serine/threonine-protei 100.0 1E-28 3.4E-33 249.9 11.3 226 92-347 43-329 (352)
202 3pg1_A Mitogen-activated prote 100.0 1.7E-28 5.9E-33 248.2 13.0 233 92-348 23-317 (362)
203 3brb_A Proto-oncogene tyrosine 100.0 2.3E-28 7.9E-33 242.1 13.4 226 92-346 35-300 (313)
204 1wak_A Serine/threonine-protei 100.0 5.2E-29 1.8E-33 253.5 8.9 181 93-308 39-291 (397)
205 4e7w_A Glycogen synthase kinas 100.0 2.1E-28 7.1E-33 252.6 13.5 218 92-347 41-321 (394)
206 3pfq_A PKC-B, PKC-beta, protei 100.0 3.1E-28 1.1E-32 268.7 15.6 222 93-343 343-588 (674)
207 3fme_A Dual specificity mitoge 100.0 1.7E-28 5.7E-33 239.6 11.8 222 93-347 9-266 (290)
208 4eut_A Serine/threonine-protei 100.0 5.7E-29 1.9E-33 256.6 8.8 224 91-347 9-302 (396)
209 1mqb_A Ephrin type-A receptor 100.0 2.4E-28 8.3E-33 245.7 13.1 227 92-347 45-302 (333)
210 3lzb_A Epidermal growth factor 100.0 1.5E-28 5.2E-33 246.8 11.6 225 93-347 17-271 (327)
211 2eu9_A Dual specificity protei 100.0 2.9E-28 9.8E-33 243.9 13.4 221 93-348 21-334 (355)
212 1byg_A CSK, protein (C-termina 100.0 1.5E-28 5.1E-33 239.4 10.7 215 93-346 23-265 (278)
213 1k9a_A Carboxyl-terminal SRC k 100.0 4E-28 1.4E-32 254.9 14.5 215 93-346 195-437 (450)
214 3c1x_A Hepatocyte growth facto 100.0 2.1E-28 7.3E-33 251.3 12.2 230 90-347 88-348 (373)
215 2clq_A Mitogen-activated prote 100.0 2.8E-28 9.5E-33 238.6 12.3 218 97-347 28-278 (295)
216 1j1b_A Glycogen synthase kinas 100.0 3.2E-28 1.1E-32 253.5 13.1 217 92-347 55-336 (420)
217 2yfx_A Tyrosine-protein kinase 99.9 2.9E-28 1E-32 243.4 12.0 225 93-347 32-297 (327)
218 2vwi_A Serine/threonine-protei 99.9 5.6E-29 1.9E-33 244.1 6.5 230 92-348 16-288 (303)
219 3cek_A Dual specificity protei 99.9 8.4E-28 2.9E-32 238.4 15.0 231 88-347 25-292 (313)
220 3an0_A Dual specificity mitoge 99.9 4E-28 1.4E-32 243.5 12.8 221 93-347 53-310 (340)
221 3rgf_A Cyclin-dependent kinase 99.9 2.5E-28 8.5E-33 252.1 11.4 226 93-349 22-335 (405)
222 2h8h_A Proto-oncogene tyrosine 99.9 2.2E-28 7.6E-33 262.7 11.5 222 93-347 269-516 (535)
223 1blx_A Cyclin-dependent kinase 99.9 4.3E-28 1.5E-32 240.9 12.7 223 93-348 13-297 (326)
224 1fvr_A Tyrosine-protein kinase 99.9 2.3E-28 8E-33 244.1 10.7 222 93-347 27-293 (327)
225 3kmu_A ILK, integrin-linked ki 99.9 2.5E-28 8.7E-33 235.2 10.5 216 93-345 12-261 (271)
226 2vx3_A Dual specificity tyrosi 99.9 9.5E-28 3.2E-32 245.8 15.0 181 93-309 56-257 (382)
227 3uqc_A Probable conserved tran 99.9 8.2E-28 2.8E-32 237.7 13.7 197 93-347 33-258 (286)
228 3ll6_A Cyclin G-associated kin 99.9 5.4E-28 1.8E-32 240.2 12.4 232 91-347 28-301 (337)
229 2pml_X PFPK7, Ser/Thr protein 99.9 4.6E-28 1.6E-32 243.2 11.8 237 93-348 33-323 (348)
230 2wei_A Calmodulin-domain prote 99.9 4.2E-28 1.4E-32 237.6 11.3 222 93-347 24-276 (287)
231 3mdy_A Bone morphogenetic prot 99.9 5.3E-28 1.8E-32 241.0 12.0 221 93-346 39-323 (337)
232 3fhr_A MAP kinase-activated pr 99.9 6.1E-28 2.1E-32 243.3 12.4 215 93-347 30-287 (336)
233 1u46_A ACK-1, activated CDC42 99.9 4.3E-28 1.5E-32 236.7 10.9 227 92-346 19-276 (291)
234 3a99_A Proto-oncogene serine/t 99.9 4.2E-28 1.4E-32 242.4 10.8 230 92-348 44-294 (320)
235 2wtk_C Serine/threonine-protei 99.9 7E-28 2.4E-32 237.2 12.0 227 93-347 7-263 (305)
236 3m2w_A MAP kinase-activated pr 99.9 2.6E-27 9E-32 233.9 15.1 192 96-347 23-256 (299)
237 3e3p_A Protein kinase, putativ 99.9 7.9E-28 2.7E-32 242.6 11.5 222 93-349 25-316 (360)
238 3gxj_A TGF-beta receptor type- 99.9 6.1E-29 2.1E-33 243.8 2.3 222 93-347 5-290 (303)
239 2pzi_A Probable serine/threoni 99.9 9.1E-28 3.1E-32 264.7 11.4 216 93-346 82-319 (681)
240 1q8y_A SR protein kinase; tran 99.9 7.7E-28 2.6E-32 243.5 8.7 222 92-349 20-335 (373)
241 2rio_A Serine/threonine-protei 99.9 1.7E-27 6E-32 248.9 11.5 223 92-347 16-295 (434)
242 4fl3_A Tyrosine-protein kinase 99.9 1.3E-27 4.6E-32 262.0 10.8 222 96-345 374-622 (635)
243 2ozo_A Tyrosine-protein kinase 99.9 1.8E-27 6.1E-32 259.9 11.4 222 96-346 341-590 (613)
244 2iwi_A Serine/threonine-protei 99.9 1.7E-27 5.8E-32 235.8 9.9 228 93-349 33-285 (312)
245 3aln_A Dual specificity mitoge 99.9 5.9E-27 2E-31 233.7 12.8 221 93-347 24-285 (327)
246 1b6c_B TGF-B superfamily recep 99.9 4.4E-27 1.5E-31 235.1 11.5 221 93-346 44-328 (342)
247 2y4i_B KSR2, HKSR2, kinase sup 99.9 1.7E-27 5.7E-32 235.9 7.7 226 93-347 35-295 (319)
248 2j0j_A Focal adhesion kinase 1 99.9 9.1E-27 3.1E-31 256.3 14.1 224 92-346 391-643 (656)
249 2dyl_A Dual specificity mitoge 99.9 1.3E-26 4.4E-31 229.1 13.8 222 93-347 27-283 (318)
250 3p23_A Serine/threonine-protei 99.9 9.2E-27 3.1E-31 243.9 12.6 224 91-348 24-284 (432)
251 3qa8_A MGC80376 protein; kinas 99.9 9.9E-27 3.4E-31 255.7 13.0 224 93-349 16-299 (676)
252 3dzo_A Rhoptry kinase domain; 99.9 1E-26 3.5E-31 241.6 11.8 223 93-348 80-364 (413)
253 2vuw_A Serine/threonine-protei 99.9 2E-26 6.9E-31 231.2 9.4 213 93-335 22-323 (336)
254 4azs_A Methyltransferase WBDD; 99.9 5.4E-25 1.8E-29 238.5 7.5 184 99-305 242-433 (569)
255 3en9_A Glycoprotease, O-sialog 99.8 1.1E-21 3.7E-26 211.3 10.4 188 96-305 341-533 (540)
256 1nd4_A Aminoglycoside 3'-phosp 99.5 3E-14 1E-18 135.8 12.5 126 98-250 26-214 (264)
257 3tm0_A Aminoglycoside 3'-phosp 99.5 6.1E-14 2.1E-18 135.2 13.0 134 93-250 16-213 (263)
258 3dxp_A Putative acyl-COA dehyd 99.3 5.8E-12 2E-16 127.3 12.0 133 96-250 43-248 (359)
259 3d1u_A Putative fructosamine-3 99.2 2E-10 7E-15 113.7 12.8 77 96-194 20-97 (288)
260 3r70_A Aminoglycoside phosphot 99.1 1.5E-10 5.2E-15 115.5 11.9 127 96-250 42-237 (320)
261 4gkh_A Aminoglycoside 3'-phosp 99.1 7.8E-10 2.7E-14 106.6 11.8 127 98-250 31-223 (272)
262 3ovc_A Hygromycin-B 4-O-kinase 99.0 8.5E-10 2.9E-14 112.6 10.8 126 96-250 46-243 (362)
263 3sg8_A APH(2'')-ID; antibiotic 99.0 1.2E-09 4.1E-14 107.9 9.4 182 97-309 26-286 (304)
264 3ats_A Putative uncharacterize 98.9 1E-09 3.5E-14 110.4 7.7 78 97-195 26-121 (357)
265 3tdw_A Gentamicin resistance p 98.9 2E-09 6.7E-14 107.0 9.2 126 97-250 25-224 (306)
266 2q83_A YTAA protein; 2635576, 98.9 4.3E-09 1.5E-13 104.3 11.5 71 97-194 38-118 (346)
267 3f7w_A Putative fructosamine-3 98.9 1.3E-08 4.5E-13 99.7 13.9 76 96-193 20-96 (288)
268 2ppq_A HSK, HK, homoserine kin 98.8 1.1E-08 3.8E-13 101.2 11.2 129 97-250 28-217 (322)
269 3csv_A Aminoglycoside phosphot 98.8 2.7E-08 9.2E-13 99.3 11.2 129 97-250 24-217 (333)
270 2olc_A MTR kinase, methylthior 98.8 2.5E-08 8.6E-13 102.0 11.0 82 96-192 35-120 (397)
271 1zyl_A Hypothetical protein YI 98.7 3.7E-08 1.3E-12 97.7 11.4 74 97-194 32-114 (328)
272 3dxq_A Choline/ethanolamine ki 98.7 1.8E-08 6.1E-13 99.4 8.5 124 96-250 23-202 (301)
273 3i1a_A Spectinomycin phosphotr 98.7 1.3E-07 4.3E-12 95.4 12.2 66 100-194 32-108 (339)
274 3jr1_A Putative fructosamine-3 98.6 1.7E-07 5.8E-12 93.9 12.3 72 97-194 42-118 (312)
275 3c5i_A Choline kinase; choline 98.6 9.2E-08 3.2E-12 96.9 9.5 74 97-194 39-121 (369)
276 2pyw_A Uncharacterized protein 98.4 3.2E-07 1.1E-11 94.9 8.3 31 219-250 231-261 (420)
277 3feg_A Choline/ethanolamine ki 98.4 1.3E-06 4.4E-11 89.9 12.1 130 97-250 56-254 (379)
278 1nw1_A Choline kinase (49.2 KD 98.4 8.7E-07 3E-11 92.4 11.0 73 97-194 79-159 (429)
279 2qg7_A Ethanolamine kinase PV0 98.3 3.7E-06 1.3E-10 88.5 11.8 74 97-194 114-188 (458)
280 3mes_A Choline kinase; malaria 98.2 5E-06 1.7E-10 86.7 10.0 74 97-194 76-157 (424)
281 3f2s_A CK, chetk-alpha, cholin 98.1 1.6E-05 5.4E-10 82.3 11.7 93 97-194 58-158 (401)
282 3g15_A CK, chetk-alpha, cholin 97.6 0.00046 1.6E-08 70.8 12.3 93 97-194 58-158 (401)
283 1cja_A Protein (actin-fragmin 92.9 0.14 4.8E-06 51.3 6.3 71 181-251 156-238 (342)
284 2x4h_A Hypothetical protein SS 84.1 0.88 3E-05 38.6 4.2 71 8-81 8-78 (139)
285 3ech_A MEXR, multidrug resista 79.3 2.5 8.5E-05 35.6 5.3 68 10-81 34-105 (142)
286 3fm5_A Transcriptional regulat 78.6 2 6.9E-05 36.6 4.5 70 10-82 36-109 (150)
287 3g3z_A NMB1585, transcriptiona 78.5 2.7 9.3E-05 35.4 5.3 68 10-81 28-99 (145)
288 3tgn_A ADC operon repressor AD 78.5 3.2 0.00011 34.9 5.7 68 10-82 35-106 (146)
289 2fbh_A Transcriptional regulat 77.8 3.3 0.00011 34.7 5.6 70 10-82 34-107 (146)
290 2dk5_A DNA-directed RNA polyme 77.1 2.4 8.1E-05 34.2 4.1 58 5-64 12-69 (91)
291 3oop_A LIN2960 protein; protei 76.3 2.1 7.2E-05 36.1 3.9 69 10-82 34-106 (143)
292 4hbl_A Transcriptional regulat 74.7 2.6 8.9E-05 35.9 4.1 69 10-82 38-110 (149)
293 2yle_A Protein spire homolog 1 74.5 7.4 0.00025 36.7 7.4 114 206-347 54-168 (229)
294 1sfx_A Conserved hypothetical 73.7 2 6.8E-05 34.1 2.9 68 10-81 17-87 (109)
295 3k0l_A Repressor protein; heli 73.4 4.5 0.00015 34.9 5.4 69 10-82 43-115 (162)
296 3f3x_A Transcriptional regulat 72.9 2 6.9E-05 36.3 2.9 68 10-82 34-105 (144)
297 2vn2_A DNAD, chromosome replic 72.8 4.6 0.00016 34.2 5.1 62 6-67 23-87 (128)
298 3bja_A Transcriptional regulat 72.6 4 0.00014 33.8 4.7 68 10-81 30-101 (139)
299 2fa5_A Transcriptional regulat 72.5 4.1 0.00014 34.9 4.9 68 10-81 46-117 (162)
300 2frh_A SARA, staphylococcal ac 72.5 3.6 0.00012 34.3 4.4 71 10-82 34-108 (127)
301 3bdd_A Regulatory protein MARR 71.8 4.1 0.00014 33.9 4.6 66 10-79 28-97 (142)
302 2gxg_A 146AA long hypothetical 70.4 4 0.00014 34.2 4.2 68 10-82 34-105 (146)
303 3b73_A PHIH1 repressor-like pr 70.2 3.3 0.00011 34.6 3.5 66 11-82 11-78 (111)
304 3kp7_A Transcriptional regulat 69.6 4.4 0.00015 34.4 4.4 68 10-82 35-108 (151)
305 4aik_A Transcriptional regulat 69.3 6.3 0.00021 34.0 5.3 69 10-81 28-100 (151)
306 3ls8_A Phosphatidylinositol 3- 68.9 17 0.00057 39.3 9.5 75 171-249 402-501 (614)
307 1r7j_A Conserved hypothetical 68.5 3.3 0.00011 33.4 3.1 58 16-82 11-68 (95)
308 3deu_A Transcriptional regulat 68.5 5.8 0.0002 34.6 5.0 70 10-82 50-123 (166)
309 1jgs_A Multiple antibiotic res 68.3 4.6 0.00016 33.5 4.1 69 10-82 31-103 (138)
310 2nyx_A Probable transcriptiona 68.2 3.4 0.00012 36.1 3.4 68 10-81 42-113 (168)
311 2nnn_A Probable transcriptiona 67.8 4.3 0.00015 33.7 3.8 68 10-81 35-106 (140)
312 3bpv_A Transcriptional regulat 67.7 3.4 0.00012 34.3 3.1 66 10-79 26-95 (138)
313 2heo_A Z-DNA binding protein 1 67.1 4.3 0.00015 30.4 3.3 53 10-65 7-59 (67)
314 2rdp_A Putative transcriptiona 67.0 4.5 0.00016 34.1 3.9 68 10-81 39-110 (150)
315 3jw4_A Transcriptional regulat 66.9 7 0.00024 33.0 5.1 71 10-82 38-112 (148)
316 2y75_A HTH-type transcriptiona 66.9 7.3 0.00025 32.6 5.1 61 16-77 12-72 (129)
317 3nrv_A Putative transcriptiona 66.7 6.9 0.00024 32.9 5.0 69 10-82 37-109 (148)
318 3cdh_A Transcriptional regulat 66.6 6.6 0.00023 33.4 4.9 68 10-81 40-111 (155)
319 3boq_A Transcriptional regulat 65.2 5.3 0.00018 34.1 4.0 69 10-81 44-116 (160)
320 2qww_A Transcriptional regulat 64.6 6 0.00021 33.5 4.2 67 10-80 38-110 (154)
321 2fbi_A Probable transcriptiona 64.6 4.2 0.00014 33.8 3.1 67 10-80 33-103 (142)
322 1lj9_A Transcriptional regulat 64.4 5.8 0.0002 33.1 4.0 68 10-81 26-97 (144)
323 2hr3_A Probable transcriptiona 64.2 4.4 0.00015 34.0 3.2 69 10-81 32-104 (147)
324 3e6m_A MARR family transcripti 64.2 5.6 0.00019 34.3 3.9 68 10-81 50-121 (161)
325 3s2w_A Transcriptional regulat 63.7 5.2 0.00018 34.3 3.6 69 10-82 47-119 (159)
326 2a61_A Transcriptional regulat 63.5 4.6 0.00016 33.8 3.2 67 10-80 30-100 (145)
327 4b8x_A SCO5413, possible MARR- 62.0 4.2 0.00014 34.9 2.7 70 10-81 32-105 (147)
328 2pn6_A ST1022, 150AA long hypo 61.3 11 0.00038 32.2 5.3 53 11-67 1-53 (150)
329 1on2_A Transcriptional regulat 61.0 3.9 0.00013 34.6 2.3 70 11-82 2-71 (142)
330 3k69_A Putative transcription 60.1 12 0.00042 33.0 5.5 61 15-77 14-74 (162)
331 3lwf_A LIN1550 protein, putati 60.1 11 0.00038 33.3 5.1 62 15-77 29-90 (159)
332 3t8r_A Staphylococcus aureus C 59.8 9.5 0.00033 32.9 4.6 62 15-77 13-74 (143)
333 1s3j_A YUSO protein; structura 59.5 5.6 0.00019 33.7 3.0 69 9-81 33-105 (155)
334 3cjn_A Transcriptional regulat 59.1 7.8 0.00027 33.2 3.9 68 10-81 49-120 (162)
335 1tbx_A ORF F-93, hypothetical 58.7 5.3 0.00018 31.6 2.5 69 10-82 5-78 (99)
336 3nqo_A MARR-family transcripti 58.1 11 0.00039 33.5 5.0 61 7-69 35-95 (189)
337 1ylf_A RRF2 family protein; st 58.1 9.9 0.00034 32.9 4.4 60 15-77 16-75 (149)
338 3eco_A MEPR; mutlidrug efflux 57.8 10 0.00034 31.5 4.3 58 10-69 28-85 (139)
339 3r0a_A Putative transcriptiona 57.7 11 0.00038 31.4 4.6 56 8-65 21-76 (123)
340 2yu3_A DNA-directed RNA polyme 56.9 11 0.00037 30.7 4.1 59 5-65 29-87 (95)
341 1z91_A Organic hydroperoxide r 56.9 6.4 0.00022 33.0 2.9 54 10-67 37-90 (147)
342 3i4p_A Transcriptional regulat 56.3 17 0.00059 31.7 5.7 53 11-67 1-53 (162)
343 2eth_A Transcriptional regulat 56.1 11 0.00036 32.1 4.3 68 10-81 41-112 (154)
344 2wte_A CSA3; antiviral protein 55.6 12 0.00041 35.5 4.8 68 10-82 149-216 (244)
345 2fbk_A Transcriptional regulat 54.7 13 0.00046 32.5 4.8 71 10-81 66-140 (181)
346 3hsr_A HTH-type transcriptiona 54.0 8.5 0.00029 32.2 3.2 66 10-79 33-102 (140)
347 2cyy_A Putative HTH-type trans 53.4 26 0.00087 30.0 6.3 54 10-67 4-57 (151)
348 3hrs_A Metalloregulator SCAR; 52.9 13 0.00046 34.1 4.7 65 13-81 4-68 (214)
349 3bro_A Transcriptional regulat 51.7 20 0.00068 29.5 5.2 56 10-67 31-86 (141)
350 1i1g_A Transcriptional regulat 51.5 29 0.001 28.9 6.3 51 11-65 2-52 (141)
351 2x6h_A GH13170P, VPS34, phosph 50.7 7.8 0.00027 42.5 3.0 75 171-249 476-575 (696)
352 2cfx_A HTH-type transcriptiona 50.6 17 0.00057 30.9 4.6 50 11-64 3-52 (144)
353 3k2z_A LEXA repressor; winged 50.5 9.2 0.00031 34.6 3.0 65 10-74 2-67 (196)
354 2e1c_A Putative HTH-type trans 50.2 31 0.0011 30.4 6.5 54 10-67 24-77 (171)
355 3u2r_A Regulatory protein MARR 49.4 12 0.00041 32.3 3.5 59 10-70 43-101 (168)
356 2bv6_A MGRA, HTH-type transcri 48.4 20 0.00069 29.6 4.7 53 10-66 34-86 (142)
357 2qvo_A Uncharacterized protein 48.2 7.9 0.00027 30.6 1.9 74 9-82 8-82 (95)
358 1ub9_A Hypothetical protein PH 47.7 8.5 0.00029 30.0 2.1 66 12-81 15-84 (100)
359 2w25_A Probable transcriptiona 46.4 20 0.00069 30.5 4.5 52 10-65 4-55 (150)
360 3bj6_A Transcriptional regulat 46.2 23 0.00078 29.6 4.8 54 10-67 37-90 (152)
361 2pex_A Transcriptional regulat 45.3 20 0.00067 30.2 4.2 53 10-66 44-96 (153)
362 2p5v_A Transcriptional regulat 45.2 21 0.00073 30.8 4.5 52 10-65 7-58 (162)
363 1xd7_A YWNA; structural genomi 45.0 37 0.0013 29.0 6.0 57 16-77 12-68 (145)
364 2cg4_A Regulatory protein ASNC 43.9 25 0.00085 30.0 4.7 51 10-64 5-55 (152)
365 1y0u_A Arsenical resistance op 43.0 24 0.00083 27.6 4.1 57 12-77 30-86 (96)
366 2v79_A DNA replication protein 42.9 19 0.00066 30.8 3.7 54 10-63 29-83 (135)
367 4fx0_A Probable transcriptiona 42.8 27 0.00093 29.7 4.7 70 10-80 30-104 (148)
368 2ia0_A Putative HTH-type trans 42.7 27 0.00093 30.8 4.9 53 8-64 12-64 (171)
369 2dbb_A Putative HTH-type trans 42.7 25 0.00087 29.9 4.5 51 10-64 6-56 (151)
370 1p6r_A Penicillinase repressor 39.4 27 0.00092 26.4 3.7 53 8-64 4-60 (82)
371 3pqk_A Biofilm growth-associat 38.9 68 0.0023 25.1 6.3 63 12-79 22-85 (102)
372 2bcx_B Ryanodine receptor 1; E 38.8 30 0.001 22.1 3.1 18 422-439 5-22 (30)
373 2fxa_A Protease production reg 38.6 25 0.00087 31.8 4.1 68 10-81 45-116 (207)
374 2y3a_A Phosphatidylinositol-4, 38.0 15 0.00052 42.2 2.9 25 225-249 940-964 (1092)
375 2wxf_A Phosphatidylinositol-4, 37.4 13 0.00045 42.1 2.2 25 225-249 788-812 (940)
376 1z7u_A Hypothetical protein EF 37.3 29 0.001 28.1 3.9 62 15-81 24-90 (112)
377 1e7u_A Phosphatidylinositol 3- 36.0 15 0.0005 41.9 2.3 25 225-249 804-828 (961)
378 2hzt_A Putative HTH-type trans 35.4 40 0.0014 27.0 4.4 62 16-82 17-83 (107)
379 3cuo_A Uncharacterized HTH-typ 34.5 38 0.0013 26.0 4.0 64 12-79 23-87 (99)
380 2p8t_A Hypothetical protein PH 34.1 41 0.0014 30.9 4.7 64 11-82 15-78 (200)
381 3df8_A Possible HXLR family tr 33.8 28 0.00095 28.4 3.2 49 34-82 45-94 (111)
382 2obp_A Putative DNA-binding pr 33.6 60 0.002 26.2 5.0 56 10-66 13-71 (96)
383 2oqg_A Possible transcriptiona 33.6 36 0.0012 27.1 3.8 68 7-79 14-83 (114)
384 2g9w_A Conserved hypothetical 32.8 43 0.0015 28.1 4.3 54 8-64 4-61 (138)
385 2pg4_A Uncharacterized protein 32.8 18 0.00063 28.2 1.8 66 17-82 16-84 (95)
386 1ku9_A Hypothetical protein MJ 32.4 55 0.0019 26.8 4.9 54 10-66 23-76 (152)
387 1bja_A Transcription regulator 31.6 36 0.0012 27.5 3.4 66 9-81 12-78 (95)
388 2o0y_A Transcriptional regulat 31.2 27 0.00093 32.9 3.1 57 17-75 24-80 (260)
389 1okr_A MECI, methicillin resis 30.8 29 0.00098 28.1 2.8 53 8-64 5-61 (123)
390 1fx7_A Iron-dependent represso 30.1 29 0.00098 32.0 2.9 68 10-81 3-72 (230)
391 1p4x_A Staphylococcal accessor 29.0 48 0.0016 31.2 4.3 70 10-81 155-228 (250)
392 1mkm_A ICLR transcriptional re 28.5 30 0.001 32.3 2.8 57 15-76 10-66 (249)
393 3hhm_A Phosphatidylinositol-4, 28.5 28 0.00095 40.1 2.9 25 225-249 937-961 (1091)
394 3mq0_A Transcriptional repress 27.5 82 0.0028 29.8 5.8 98 16-121 33-135 (275)
395 2xrn_A HTH-type transcriptiona 26.7 30 0.001 32.2 2.5 57 16-76 9-65 (241)
396 2g7u_A Transcriptional regulat 26.0 62 0.0021 30.2 4.6 58 17-77 15-72 (257)
397 2d1h_A ST1889, 109AA long hypo 24.2 79 0.0027 24.3 4.2 55 8-65 16-70 (109)
398 1qgp_A Protein (double strande 23.4 1.1E+02 0.0037 23.2 4.7 51 13-64 14-64 (77)
399 3hhh_A Transcriptional regulat 22.8 20 0.0007 29.7 0.4 65 15-83 15-90 (116)
400 1sd4_A Penicillinase repressor 22.5 73 0.0025 25.7 3.8 51 9-63 6-60 (126)
401 2qq9_A Diphtheria toxin repres 22.0 35 0.0012 31.4 1.9 68 10-81 3-72 (226)
402 3f8b_A Transcriptional regulat 21.6 24 0.00083 29.1 0.6 65 14-82 13-90 (116)
403 1hsj_A Fusion protein consisti 20.8 68 0.0023 32.5 4.0 69 10-80 401-473 (487)
404 2f2e_A PA1607; transcription f 20.5 77 0.0026 27.0 3.7 62 15-81 26-90 (146)
No 1
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=100.00 E-value=1e-66 Score=539.76 Aligned_cols=322 Identities=51% Similarity=0.855 Sum_probs=291.6
Q ss_pred CCcchhhhccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCc--hhHHHHHHHHhcccccc-cCCCccCccccccc
Q 012042 1 MKLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHG--GTYKVLKNLLRYKLLHH-DSSKYDGFRLTYLG 77 (472)
Q Consensus 1 m~l~~~~~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~--~~~~~l~~L~k~~lv~~-~~~~y~gy~lt~~g 77 (472)
||||++.+|+|+++|||||+|||+||+||||||.++|.++|+|+.+ ++.++|++|.+.+|+.+ .+.+|+||+||+.|
T Consensus 2 m~l~~~~~r~l~~~d~rvL~ave~g~~~he~vp~~~i~~~~~l~~~~~~~~~~l~~l~~~~lv~~~~~~~y~gy~lt~~g 81 (397)
T 4gyi_A 2 MKLDTRAMRHLTAEDWRVLTAVEMGSKNHEIVPTPLIEKIARLRGGSSGVHKSIATLAKAGLIARMKEAKYDGYRLTYGG 81 (397)
T ss_dssp -CCCCSGGGTCCHHHHHHHHHHHHHTTTCSSEEHHHHHHHHCSSSCCCSHHHHHHHHHHTTSEEEEECSSCEEEEECHHH
T ss_pred CcCCHHHHhhcCHHHHHHHHHHHhccCCcccccHHHHHHHhCCCCchHhHHHHHHhhhhcCceeeccCCCcceeeeccCc
Confidence 9999999999999999999999999999999999999999999754 89999999999999987 67899999999999
Q ss_pred ccHHHHHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHH
Q 012042 78 YDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAAL 157 (472)
Q Consensus 78 ~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~ 157 (472)
||++||++|.++|++|+|+++||+|+||.||+|.+.+|+.||||+++.+..+|+.++..++|+....+.+|+..++.++.
T Consensus 82 yD~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~ 161 (397)
T 4gyi_A 82 LDYLALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAI 161 (397)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999899999999999999999988888889888899999999999999
Q ss_pred HHHHHHHHhhhCCCCcceeeecCCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 158 KEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 158 rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+|+.+|.+|++.|+++|.|+..++++||||||+|.+|.++.....+..++.||+.+|.+||++|||||||||+|||++++
T Consensus 162 kE~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 162 KEFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp HHHHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCC
Confidence 99999999999999999999999999999999999999887777888999999999999999999999999999999876
Q ss_pred C----------cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc-
Q 012042 238 E----------KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK- 306 (472)
Q Consensus 238 g----------~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~- 306 (472)
| .++|||||||+...||+|.++|.||+.|+.+||+++|++.++.+ .|.|..+..
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~hp~a~~~l~RDv~ni~~fF~kk~~~~~~~~---------------~~~~~~~~~~ 306 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMDHPNAEMYFDRDVQCIKRFFERRFHFVSTTP---------------GPFYKDAKKT 306 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCSSC---------------CCCHHHHHTT
T ss_pred CCcccccccccceEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHhccCCccccc---------------ccchHHHhhh
Confidence 6 38999999999999999999999999999999999999987642 133333221
Q ss_pred ----cCCcchhhhhccCCCHHHHHHHHHHHhcCcc
Q 012042 307 ----TAGFLDKELAASGFTRKDQDVIQKFIGGSIE 337 (472)
Q Consensus 307 ----~~~~l~~~~~~~~~s~~~~~~l~k~l~~~p~ 337 (472)
....++..+.+++|+++....++..+.....
T Consensus 307 ~~~~~~~~ld~~~~as~~~~~~~~d~~~~~~~~~~ 341 (397)
T 4gyi_A 307 VGKDGAKRLDAALEASGFTKKMAKDLEAAIREQQE 341 (397)
T ss_dssp TTCTTCCCGGGTTTTTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhccccchhhhhhcCCCCcchHHHHHHHHHhhhc
Confidence 1234677788999999999888888765544
No 2
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=100.00 E-value=1.1e-48 Score=388.54 Aligned_cols=270 Identities=27% Similarity=0.522 Sum_probs=242.7
Q ss_pred cchhhhccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHH
Q 012042 3 LDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 3 l~~~~~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~a 82 (472)
++++.+++|+++|||||+|+|+||++|+|||.+++.++++++.+.....++.|.+.++.......|+||++++.||++++
T Consensus 2 ~~~~~~~~l~~~~~~~l~a~e~g~~~~~~v~~~~i~~~~~l~~~~~~~~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (282)
T 1zar_A 2 NIAELYGKMGKHSWRIMDAIFKNLWDYEYVPLQLISSHARIGEEKARNILKYLSDLRVVQNRQKDYEGSTFTFIGLSLYS 81 (282)
T ss_dssp CHHHHHHTCCHHHHHHHHHHHTTTTTCSSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECSSSCEEEECHHHHHHHH
T ss_pred chHHHHHhCCHhhhhhhHHHhhCCcCceecCHHHHHHHhCCChhhHHHHHHHHhhCCCccccCCCccceeeecCCccHHH
Confidence 35899999999999999999999999999999999999999999999999999999998887888999999999999999
Q ss_pred HHHHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHH
Q 012042 83 IKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAF 162 (472)
Q Consensus 83 l~~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~ 162 (472)
+..+.+++.+|.+++.||+|+||.||+|.+.+|+.||||+++.+..++...+..++|+ +..|.+..+..+.+|+.+
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~----~~~w~~~~~~~~~~E~~~ 157 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYG----DLHFSVLAIRSARNEFRA 157 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-----------CHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhc----chhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997799999999988777777666666666 678988889999999999
Q ss_pred HHHhhhCCCCcceeeecCCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 163 MKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 163 L~~L~~~gi~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
|.+|. + +.+|.++..+.+|+|||||+|++|.+ +....+..++.+++.+|.+||++||+||||||.|||++ ++.++|
T Consensus 158 l~~l~-~-~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 158 LQKLQ-G-LAVPKVYAWEGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp HHHTT-T-SSSCCEEEEETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEE
T ss_pred HHhcc-C-CCcCeEEeccceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEE
Confidence 99999 4 88899888889999999999999998 55567788999999999999999999999999999999 999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhcccccccccc
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQ 280 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~ 280 (472)
+|||+|+...+|+|.+++.||+.++..||.++||+..+
T Consensus 234 ~DFG~a~~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~ 271 (282)
T 1zar_A 234 IDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKD 271 (282)
T ss_dssp CCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred EECCCCeECCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999998765
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.7e-38 Score=325.06 Aligned_cols=224 Identities=14% Similarity=0.152 Sum_probs=170.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|++ .+|+.||||+++.....-. .+..+.+|+.+|.+|.|++|
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~--------------------~~~~~~~E~~il~~l~HpnI 85 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK--------------------EREESRREVAVLANMKHPNI 85 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHH--------------------HHHHHHHHHHHHHHCCCCCC
Confidence 78889999999999999998 5799999999874422111 12246689999999998653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
.++++. +..|||||||+|++|.+++... .+ ..++.||+.+|.|||++|||||||||+||||+.+|.
T Consensus 86 --V~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~ 163 (350)
T 4b9d_A 86 --VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 163 (350)
T ss_dssp --CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCC
T ss_pred --CcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCC
Confidence 333332 6789999999999999876321 12 247899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+||+|||+|+..... ......++++.++++|+.+.+..++.++||||||+++|+++++..++...
T Consensus 164 vKl~DFGla~~~~~~---------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 164 VQLGDFGIARVLNST---------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp EEECSTTEESCCCHH---------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEEcccccceeecCC---------cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 999999999865321 11223456777778888777788999999999999999999987543210
Q ss_pred -hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++.+++++|.+||..+|++|||+++..+
T Consensus 235 ~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 235 LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 13468899999999999999999999987654
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.3e-38 Score=323.51 Aligned_cols=223 Identities=13% Similarity=0.187 Sum_probs=176.4
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|++.+.||+|+||.||+|.+ .+|+.||||++........ ..+.+|+.+|++|.|++
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~----------------------~~~~~Ei~il~~l~Hpn 132 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----------------------ELLFNEVVIMRDYQHEN 132 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSG----------------------GGGHHHHHHHHHCCCTT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHH----------------------HHHHHHHHHHHhCCCCC
Confidence 377889999999999999999 5799999999863321110 12457999999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
| .+.++. +..|||||||+|++|.+++... . ...++.||+.+|.|||++|||||||||+||||+.+|.+|
T Consensus 133 I--V~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vK 210 (346)
T 4fih_A 133 V--VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 210 (346)
T ss_dssp B--CCEEEEEEETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred C--CcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEE
Confidence 3 333332 6789999999999999876432 2 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||+|+.+.... ....+++++.++++|+.+....++.++||||||+++|+++++..++... .
T Consensus 211 l~DFGla~~~~~~~---------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~ 281 (346)
T 4fih_A 211 LSDFGFCAQVSKEV---------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM 281 (346)
T ss_dssp ECCCTTCEECCSSS---------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EecCcCceecCCCC---------CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH
Confidence 99999998664321 2223456777778888777788999999999999999999987543210 0
Q ss_pred h---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 L---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 ~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+ ....++.+++++|.+||..||++|||++|-..
T Consensus 282 i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 282 IRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 11357899999999999999999999988765
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.5e-38 Score=316.39 Aligned_cols=226 Identities=15% Similarity=0.127 Sum_probs=176.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++++.||+|+||.||+|++ .+|+.||||++.... ... . .....+.+|+.+|.+|.|++|
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~--~~~----------~-------~~~~~~~~E~~il~~l~HpnI 94 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRH--IIK----------E-------NKVPYVTRERDVMSRLDHPFF 94 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--HHH----------T-------TCHHHHHHHHHHHTTCCCTTB
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHH--CCC----------H-------HHHHHHHHHHHHHHhCCCCCC
Confidence 78899999999999999998 579999999986211 100 0 011246689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
.+.++. +..|||||||+|++|.+++.. ..+ ..++.||+.+|.|||++|||||||||+|||++.+|.+|
T Consensus 95 --v~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vK 172 (311)
T 4aw0_A 95 --VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQ 172 (311)
T ss_dssp --CCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEE
T ss_pred --CeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEE
Confidence 333332 678999999999999987642 122 34889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||+|+.+..... .....+++++.++++|+.+.+..++.++|+||+|+++|+++++..++... .
T Consensus 173 l~DFGla~~~~~~~~-------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~ 245 (311)
T 4aw0_A 173 ITDFGTAKVLSPESK-------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK 245 (311)
T ss_dssp ECCCTTCEECCTTTT-------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EEEcCCceecCCCCC-------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999986642211 11223456777778888877788999999999999999999987654210 1
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+ .+..++.+.+++|.+||..+|++|||++|-.
T Consensus 246 i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 246 IIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 1356899999999999999999999998753
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=325.32 Aligned_cols=224 Identities=13% Similarity=0.187 Sum_probs=178.6
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|++.+.||+|+||.||+|.+ .+|+.||||++........ ..+.+|+.+|+.|.|++
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~----------------------~~~~~Ei~il~~l~Hpn 209 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----------------------ELLFNEVVIMRDYQHEN 209 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSG----------------------GGHHHHHHHHHHCCCTT
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHH----------------------HHHHHHHHHHHhCCCCC
Confidence 488889999999999999999 5799999999864321111 12457999999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
| .++++. +..|||||||+|++|.+++... . ...++.||+.+|.|||++|||||||||+||||+.+|.+|
T Consensus 210 I--V~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vK 287 (423)
T 4fie_A 210 V--VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 287 (423)
T ss_dssp B--CCEEEEEEETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEE
T ss_pred C--CceEEEEEECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEE
Confidence 3 334432 6789999999999999876432 2 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||+|+.+.... ....+++++.++++|+.+....++.++||||||+++|+++++..++... .
T Consensus 288 l~DFGla~~~~~~~---------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~ 358 (423)
T 4fie_A 288 LSDFGFCAQVSKEV---------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM 358 (423)
T ss_dssp ECCCTTCEECCSSC---------CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EecCccceECCCCC---------ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH
Confidence 99999998664321 2233456778888888877888999999999999999999987543211 0
Q ss_pred h---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 315 L---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 315 ~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
+ ....++.+++++|.+||..+|++|||++|.+.-
T Consensus 359 i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 359 IRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 124688999999999999999999999887663
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.6e-37 Score=316.26 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=169.1
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.++||+|+||.||+|++ .+|+.||||+++... + ..+|+.+|.+|.|++
T Consensus 59 ~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~--~-------------------------~~~E~~il~~l~Hpn 111 (336)
T 4g3f_A 59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV--F-------------------------RVEELVACAGLSSPR 111 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--C-------------------------CTHHHHTTTTCCCTT
T ss_pred heEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH--h-------------------------HHHHHHHHHhCCCCC
Confidence 467788999999999999998 579999999986431 1 125999999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC-c
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE-K 239 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g-~ 239 (472)
| .++++. +..|||||||+|++|.+++... .+ ..++.||+.+|.|||++|||||||||+||||+.+| .
T Consensus 112 I--V~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~ 189 (336)
T 4g3f_A 112 I--VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR 189 (336)
T ss_dssp B--CCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCC
T ss_pred C--CcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCE
Confidence 3 333332 5689999999999999986421 22 24889999999999999999999999999999887 6
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
+||+|||+|+.+....... .......+.++.++++|+.+.+..++.++||||||+++|+++++..++..
T Consensus 190 vKl~DFGla~~~~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~ 265 (336)
T 4g3f_A 190 AALCDFGHALCLQPDGLGK----SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC 265 (336)
T ss_dssp EEECCCTTCEEC----------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH
T ss_pred EEEeeCCCCeEccCCCccc----ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH
Confidence 9999999998764321111 11111223466677788877788899999999999999999998654311
Q ss_pred h---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 K---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ~---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. ...+..++..++++|.+||..+|++|||+.|..
T Consensus 266 ~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~ 308 (336)
T 4g3f_A 266 LKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELR 308 (336)
T ss_dssp HHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence 0 112457899999999999999999999998754
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-37 Score=304.98 Aligned_cols=222 Identities=14% Similarity=0.139 Sum_probs=158.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+|+.||||+++.....-. .....+.+|+.+|++|.|++|
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-------------------~~~~~~~~Ei~il~~l~HpnI 75 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS-------------------DMQGRIEREISYLRLLRHPHI 75 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------------------------CHHHHHHHHHHHHHCCCTTB
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH-------------------HHHHHHHHHHHHHHHCCCCCC
Confidence 77889999999999999998 5799999999864321100 011246789999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
.+.++. +..||||||| |++|.+.+... . ...++.||+.+|.|||++|||||||||+|||++.++.+|
T Consensus 76 --v~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vk 152 (275)
T 3hyh_A 76 --IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp --CCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEE
T ss_pred --CeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEE
Confidence 334432 6789999999 45776654322 2 234899999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||+|+..... ....++.++.++++|+.+.+.. ++.++||||+|+++|+++++..++...
T Consensus 153 l~DFGla~~~~~~----------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~ 222 (275)
T 3hyh_A 153 IADFGLSNIMTDG----------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 222 (275)
T ss_dssp ECCSSCC-------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EeecCCCeecCCC----------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 9999999754322 1122345666667777765555 468999999999999999987543211
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ .+..++.+++++|.+||+.+|++|||++|-.
T Consensus 223 ~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil 261 (275)
T 3hyh_A 223 NISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261 (275)
T ss_dssp HHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 11 1356889999999999999999999987643
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-36 Score=304.31 Aligned_cols=224 Identities=13% Similarity=0.047 Sum_probs=168.9
Q ss_pred CceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 90 GVFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|-.+.+...||+|+||.||+|.+ .++..||||++......-. .+..+.+|+.+|.+|.|
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~--------------------~~~~~~~E~~il~~l~H 84 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--------------------ERQRFKEEAEMLKGLQH 84 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHH--------------------HHHHHHHHHHHHHTCCC
T ss_pred CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHH--------------------HHHHHHHHHHHHHhCCC
Confidence 33467778899999999999998 5799999999863221110 12346689999999998
Q ss_pred CCCCcceeeec--------CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCC--ceeccCCCCcE
Q 012042 169 HGFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHG--LIHCDFNEFNI 232 (472)
Q Consensus 169 ~gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~G--IIHrDLKP~NI 232 (472)
++| .++++. ...|||||||+|++|.+++... .+ ..++.||+.+|.|||++| ||||||||+||
T Consensus 85 pnI--V~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NI 162 (290)
T 3fpq_A 85 PNI--VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI 162 (290)
T ss_dssp TTB--CCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGE
T ss_pred CCC--CcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhhe
Confidence 653 344432 2368999999999999876421 12 247899999999999998 99999999999
Q ss_pred EEc-CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 233 MID-DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 233 Ll~-~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
||+ .+|.+||+|||+|+..... ...++.++.++++|+.+ .+.++.++||||||+++|+++|+..++.
T Consensus 163 Ll~~~~g~vKl~DFGla~~~~~~-----------~~~~~~GTp~YmAPE~~-~~~y~~~~DiwSlGvilyelltg~~Pf~ 230 (290)
T 3fpq_A 163 FITGPTGSVKIGDLGLATLKRAS-----------FAKAVIGTPEFMAPEMY-EEKYDESVDVYAFGMCMLEMATSEYPYS 230 (290)
T ss_dssp EESSTTSCEEECCTTGGGGCCTT-----------SBEESCSSCCCCCGGGG-GTCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred eEECCCCCEEEEeCcCCEeCCCC-----------ccCCcccCccccCHHHc-CCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 997 4789999999999643211 12234566666677764 5679999999999999999999865432
Q ss_pred hh--------h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 DK--------E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ~~--------~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. . .....++.+++++|.+||..+|++|||+++...
T Consensus 231 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 231 ECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 10 0 123456788999999999999999999876543
No 10
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-36 Score=305.04 Aligned_cols=232 Identities=16% Similarity=0.135 Sum_probs=161.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|++ .+|+.||||+++...... .+..+.+|+.+|.+|.|++|
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~---------------------~~~~~~~E~~il~~l~HpnI 65 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL---------------------AREKVMREVKALAKLEHPGI 65 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHH---------------------HHHHHHHHHHHHTTCCCTTB
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHH---------------------HHHHHHHHHHHHHhCCCCCC
Confidence 67889999999999999998 579999999986432111 12246689999999988653
Q ss_pred Ccceeeec----C------------CceeEEeecCCCChhhhhccC------C---hHHHHHHHHHHHHHHHHCCceecc
Q 012042 172 PVPNAVDC----N------------RHCVIMSLVQGYPLVQVNQLQ------N---PDSVFETIIGLVVRLAEHGLIHCD 226 (472)
Q Consensus 172 ~vP~~i~~----~------------~~~LVMEyi~G~~L~~l~~~~------~---~~~i~~qIl~aL~~LH~~GIIHrD 226 (472)
.+.++. + ..|||||||+|++|.+++... . ...++.||+.+|.|||++||||||
T Consensus 66 --V~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRD 143 (299)
T 4g31_A 66 --VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRD 143 (299)
T ss_dssp --CCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred --CeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCcccc
Confidence 333331 1 258999999999999876432 1 124788999999999999999999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCcccchhhhc---cccchhhhhccccccccccccccCCCCcchheeccCchhhhh
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFD---RDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~---rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~ 303 (472)
|||+|||++.+|.+||+|||+|+............ ........+.++..+++|+.+.+..++.++||||||+++|++
T Consensus 144 lKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyel 223 (299)
T 4g31_A 144 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223 (299)
T ss_dssp CCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999998765332211110 011122345677777788877788999999999999999999
Q ss_pred hhccCCcchh-----hhhcc-------CCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 304 ISKTAGFLDK-----ELAAS-------GFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 304 ~t~~~~~l~~-----~~~~~-------~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++......+. .+... ..++....+|.+||+.+|++|||+++..+
T Consensus 224 l~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 224 LYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 8732111110 11111 23445678999999999999999987665
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.9e-37 Score=308.68 Aligned_cols=221 Identities=14% Similarity=0.143 Sum_probs=164.7
Q ss_pred eeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|++.+.||+|+||.||+|++. +++.||||+++........ ...+.+|+.+|.+|.|
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~--------------------~~~~~~E~~il~~l~H 85 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD--------------------RVRTKMERDILVEVNH 85 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE--------------------CC------CCCCCCCC
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH--------------------HHHHHHHHHHHHHCCC
Confidence 788999999999999999872 4789999998643211100 0124579999999987
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
++| .++++. +..|||||||+|++|.+++... .+ ..++.||+.+|.|||++|||||||||+|||++.+|
T Consensus 86 pnI--v~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g 163 (304)
T 3ubd_A 86 PFI--VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG 163 (304)
T ss_dssp TTE--ECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS
T ss_pred CCC--CeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC
Confidence 542 333332 6789999999999998876421 22 24889999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.+||+|||+|+...... ....++.++..+++|+.+....++.++||||+|+++|+++++..++...
T Consensus 164 ~vKl~DFGla~~~~~~~---------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~ 234 (304)
T 3ubd_A 164 HIKLTDFGLSKESIDHE---------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234 (304)
T ss_dssp CEEEESSEEEEC--------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred CEEecccccceeccCCC---------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH
Confidence 99999999998543221 1122345666777888777788999999999999999999987554210
Q ss_pred --hh------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 314 --EL------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 314 --~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.+ .+..++.+++++|.+||+.+|++|||+..
T Consensus 235 ~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~ 273 (304)
T 3ubd_A 235 MTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGP 273 (304)
T ss_dssp HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCST
T ss_pred HHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCc
Confidence 11 13568999999999999999999999864
No 12
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3e-36 Score=302.17 Aligned_cols=221 Identities=11% Similarity=0.047 Sum_probs=164.4
Q ss_pred eeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+.||+|+||.||+|.+. +|..||||+++...... +..+.+|+.+|.+|
T Consensus 15 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~----------------------~~~f~~E~~il~~l 72 (299)
T 4asz_A 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA----------------------RKDFHREAELLTNL 72 (299)
T ss_dssp EEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHH----------------------HHHHHHHHHHHTTC
T ss_pred eEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHH----------------------HHHHHHHHHHHHhC
Confidence 456799999999999999863 47789999986432111 12456899999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---------------Ch----HHHHHHHHHHHHHHHHCCce
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---------------NP----DSVFETIIGLVVRLAEHGLI 223 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---------------~~----~~i~~qIl~aL~~LH~~GII 223 (472)
+|++| .+.+++ +..|||||||+|++|.+++... .+ ..++.||+.+|.|||+++||
T Consensus 73 ~HpnI--V~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ii 150 (299)
T 4asz_A 73 QHEHI--VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFV 150 (299)
T ss_dssp CCTTB--CCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCC--ccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 88653 334442 5689999999999999876421 11 24889999999999999999
Q ss_pred eccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhh-hhccccccccccccccCCCCcchheeccCchhhh
Q 012042 224 HCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIF-KFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFA 302 (472)
Q Consensus 224 HrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~-~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~ 302 (472)
||||||.||||+.++.+||+|||+|+....... .... ...++..+++|+.+..+.++.++||||||+++|+
T Consensus 151 HRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~--------~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~E 222 (299)
T 4asz_A 151 HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY--------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222 (299)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC--------EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred cCccCHhhEEECCCCcEEECCcccceecCCCCc--------eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 999999999999999999999999975432211 1111 1223334556666667899999999999999999
Q ss_pred hhh-ccCCcch---h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 303 SIS-KTAGFLD---K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 303 ~~t-~~~~~l~---~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
++| +..+... . . ..+..++.++.++|.+|++.+|++|||.++-
T Consensus 223 llt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i 280 (299)
T 4asz_A 223 IFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280 (299)
T ss_dssp HHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 998 5543211 0 0 1235688999999999999999999998764
No 13
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=300.60 Aligned_cols=221 Identities=10% Similarity=0.065 Sum_probs=162.6
Q ss_pred eecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 94 AVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
.+++.||+|+||.||+|.+. ..||||+++....+-.. ...+.+|+.+|.+|+|++|
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~--------------------~~~f~~E~~il~~l~HpNI-- 94 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQ--------------------FQAFRNEVAVLRKTRHVNI-- 94 (307)
T ss_dssp CEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHH--------------------HHHHHHHHHHHTTCCCTTB--
T ss_pred EEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHH--------------------HHHHHHHHHHHHhCCCCCE--
Confidence 46789999999999999874 36999998744322111 1245689999999998763
Q ss_pred ceeeec---CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 174 PNAVDC---NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 174 P~~i~~---~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
...+++ +..|||||||+|++|.+++... .+ ..++.||+.+|.|||++|||||||||.||||+.++.+||+
T Consensus 95 V~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~ 174 (307)
T 3omv_A 95 LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIG 174 (307)
T ss_dssp CCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEEC
T ss_pred eeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEe
Confidence 233332 6689999999999999876322 11 2488999999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccc---cCCCCcchheeccCchhhhhhhccCCcch--------
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---DGDDGSDIDTDEGSRLSFASISKTAGFLD-------- 312 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------- 312 (472)
|||+|+........ .......++..+++|+.+. .+.++.++||||||+++|+++|+..++..
T Consensus 175 DFGla~~~~~~~~~-------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~ 247 (307)
T 3omv_A 175 DFGLATVKSRWSGS-------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII 247 (307)
T ss_dssp CCSSCBC-------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH
T ss_pred eccCceecccCCcc-------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHH
Confidence 99999755322111 1122334555566666542 34689999999999999999998654311
Q ss_pred hhh-----------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 KEL-----------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ~~~-----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+ ....++.++.++|.+|++.+|++|||..+-
T Consensus 248 ~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 291 (307)
T 3omv_A 248 FMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI 291 (307)
T ss_dssp HHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHH
T ss_pred HHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 000 123577889999999999999999998764
No 14
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=302.14 Aligned_cols=221 Identities=11% Similarity=0.034 Sum_probs=160.6
Q ss_pred eecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 94 AVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
.+.+.||+|+||.||+|.+. +++.||||+++...... +..+.+|+.+|.+|+
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~----------------------~~~f~~E~~il~~l~ 101 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA----------------------RQDFQREAELLTMLQ 101 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHH----------------------HHHHHHHHHHHTTCC
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHH----------------------HHHHHHHHHHHHhCC
Confidence 45789999999999999863 47889999986432111 124568999999998
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccC-----------------C----hHHHHHHHHHHHHHHHHCCc
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-----------------N----PDSVFETIIGLVVRLAEHGL 222 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-----------------~----~~~i~~qIl~aL~~LH~~GI 222 (472)
|++| .+++++ +..|||||||+|++|.+++... . ...++.||+.+|.|||+++|
T Consensus 102 HpnI--V~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i 179 (329)
T 4aoj_A 102 HQHI--VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF 179 (329)
T ss_dssp CTTB--CCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCC--CcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 8653 334442 5689999999999999875321 0 12488999999999999999
Q ss_pred eeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhh
Q 012042 223 IHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFA 302 (472)
Q Consensus 223 IHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~ 302 (472)
|||||||.||||+.++.+||+|||+|+......... ......++..+++|+.+....++.++||||||+++|+
T Consensus 180 iHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~-------~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~E 252 (329)
T 4aoj_A 180 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR-------VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252 (329)
T ss_dssp CCSCCCGGGEEEETTTEEEECCCC-----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ecccccHhhEEECCCCcEEEcccccceeccCCCcce-------ecCcccccccccChhhhcCCCCCccccccchHHHHHH
Confidence 999999999999999999999999998653221110 1112234444567776678899999999999999999
Q ss_pred hhh-ccCCcch---h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 303 SIS-KTAGFLD---K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 303 ~~t-~~~~~l~---~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+| ++.+... . . ..+..++.++.++|.+|++.+|++|||.++-
T Consensus 253 llt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei 310 (329)
T 4aoj_A 253 IFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310 (329)
T ss_dssp HHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred HHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHH
Confidence 998 5543211 0 0 1235688999999999999999999998764
No 15
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.2e-35 Score=297.04 Aligned_cols=222 Identities=11% Similarity=0.032 Sum_probs=163.8
Q ss_pred eecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 94 AVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
++.+.||+|+||.||+|.. .+++.||||+++...... .+..+.+|+.+|.+|+
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~---------------------~~~~f~~E~~il~~l~ 87 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP---------------------LREEFRHEAMLRARLQ 87 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC----------------------CHHHHHHHHHHHHHCC
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChH---------------------HHHHHHHHHHHHHhCC
Confidence 4568899999999999985 246789999986432110 0123568999999999
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------------C---hHHHHHHHHHHHHHHHHCC
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------------N---PDSVFETIIGLVVRLAEHG 221 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------------~---~~~i~~qIl~aL~~LH~~G 221 (472)
|++| .+.+++ +..+||||||+|++|.+++... . ...++.||+.+|.|||+++
T Consensus 88 HpNI--V~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ 165 (308)
T 4gt4_A 88 HPNV--VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH 165 (308)
T ss_dssp CTTB--CCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCC--CCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 8653 334442 5689999999999999876321 1 1248899999999999999
Q ss_pred ceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhh
Q 012042 222 LIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 222 IIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f 301 (472)
||||||||.||||++++.+||+|||+|+........ .......++..+++|+.+..+.++.++||||||++++
T Consensus 166 iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~-------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~ 238 (308)
T 4gt4_A 166 VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY-------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 238 (308)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCB-------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred CCCCCccccceEECCCCCEEECCcccceeccCCCce-------eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHH
Confidence 999999999999999999999999999755322111 0111223333445666667789999999999999999
Q ss_pred hhhh-ccCCcch---h----hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 302 ASIS-KTAGFLD---K----EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 302 ~~~t-~~~~~l~---~----~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
|.+| +..+... . .+ .+..++.++.+++.+|++.+|++|||..+-
T Consensus 239 El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei 297 (308)
T 4gt4_A 239 EVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297 (308)
T ss_dssp HHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 9998 5433211 0 00 135678899999999999999999998653
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.3e-35 Score=302.66 Aligned_cols=228 Identities=13% Similarity=0.123 Sum_probs=169.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|++.+.||+|+||.||+|.+ .+|+.||||+++........ ...+.+|+.+|++|.|++
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~--------------------~~~~~~Ei~il~~l~Hpn 114 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN--------------------AKRTLRELKILKHFKHDN 114 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHH--------------------HHHHHHHHHHHHHCCCTT
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHH--------------------HHHHHHHHHHHHhcCCCC
Confidence 378899999999999999998 57999999998633211110 124568999999999865
Q ss_pred CCcceeeec----------CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 171 FPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 171 i~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
| ..++++ +..|||||||+| +|..++... . ...++.||+.+|.|||++|||||||||+|||+
T Consensus 115 I--v~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~ 191 (398)
T 4b99_A 115 I--IAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 191 (398)
T ss_dssp B--CCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE
T ss_pred c--ceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc
Confidence 3 233321 457999999975 577665322 1 23589999999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
+.+|.+||+|||+|+.+...... ......+++++.++++|+.+.+ ..++.++||||+|+++|+++++...+...
T Consensus 192 ~~~~~~Ki~DFGla~~~~~~~~~-----~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 192 NENCELKIGDFGMARGLCTSPAE-----HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp CTTCCEEECCCTTCBCC------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred CCCCCEEEeecceeeecccCccc-----cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 99999999999999865322110 1112335677777778887654 56799999999999999999986543110
Q ss_pred --------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.....+++.+..++|.+||..||++|+|++|-+.
T Consensus 267 ~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 267 NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp SHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0001356888899999999999999999988765
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.1e-34 Score=292.94 Aligned_cols=229 Identities=10% Similarity=0.137 Sum_probs=164.3
Q ss_pred eeeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
.|++.+.||+|+||.||+|++. +++.||||++...... ..+.+|+.+|..+.
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~------------------------~~~~~E~~~l~~~~ 77 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP------------------------IRIAAELQCLTVAG 77 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH------------------------HHHHHHHHHHHHTC
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH------------------------HHHHHHHHHHHHhc
Confidence 3788999999999999999862 4778999987532211 12457999999984
Q ss_pred -hCCCCcceeee----cCCceeEEeecCCCChhhhhccCC---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC-C
Q 012042 168 -DHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD-E 238 (472)
Q Consensus 168 -~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~-g 238 (472)
|+++ ...+. .+..|||||||+|++|.+++..-. ...++.||+.+|.|||++|||||||||+|||++.+ +
T Consensus 78 ~h~nI--v~l~~~~~~~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~ 155 (361)
T 4f9c_A 78 GQDNV--MGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLK 155 (361)
T ss_dssp SBTTB--CCCSEEEEETTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT
T ss_pred CCCCC--ceEEEEEEECCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCC
Confidence 4432 22222 267899999999999998864322 23589999999999999999999999999999866 7
Q ss_pred cEEEEeCCCceecCcccchh--hhc-----------------cccchhhhhcccccccccccccc-CCCCcchheeccCc
Q 012042 239 KVTMIDFPQMVSVSHQNAQM--YFD-----------------RDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSR 298 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~--~l~-----------------rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~ 298 (472)
.+||+|||+|+......... +.. .....+..+.+++++++|+.+.+ ..++.++|+||+|+
T Consensus 156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~ 235 (361)
T 4f9c_A 156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV 235 (361)
T ss_dssp EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred eEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence 99999999998654321110 000 00111234456666667776644 46899999999999
Q ss_pred hhhhhhhccCCcchh----h----h-------------------------------------------------------
Q 012042 299 LSFASISKTAGFLDK----E----L------------------------------------------------------- 315 (472)
Q Consensus 299 ~~f~~~t~~~~~l~~----~----~------------------------------------------------------- 315 (472)
++|+++++..++... . +
T Consensus 236 il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 315 (361)
T 4f9c_A 236 IFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGH 315 (361)
T ss_dssp HHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccc
Confidence 999999987543100 0 0
Q ss_pred -----hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 316 -----AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 316 -----~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
....++.+..++|.+||..||++|+|++|-+
T Consensus 316 ~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL 351 (361)
T 4f9c_A 316 ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEAL 351 (361)
T ss_dssp ------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHH
T ss_pred cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence 0123677788999999999999999987644
No 18
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-34 Score=295.45 Aligned_cols=226 Identities=16% Similarity=0.072 Sum_probs=165.9
Q ss_pred eeeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-+++++.||+|+||.||+|.+. +++.||||.++.....-. ...+.+|+.+|.+
T Consensus 65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~---------------------~~~~~~E~~il~~ 123 (353)
T 4ase_A 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---------------------HRALMSELKILIH 123 (353)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHH---------------------HHHHHHHHHHHHH
T ss_pred HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHH---------------------HHHHHHHHHHHHH
Confidence 4678999999999999999863 246899999864322110 1235689999999
Q ss_pred hhhCCCCcceeeec-----CCceeEEeecCCCChhhhhccC-------------------C---hHHHHHHHHHHHHHHH
Q 012042 166 LEDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ-------------------N---PDSVFETIIGLVVRLA 218 (472)
Q Consensus 166 L~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~-------------------~---~~~i~~qIl~aL~~LH 218 (472)
|.|+. ++.+.++. +..+||||||+|++|.+++... . ...++.||+.+|.|||
T Consensus 124 l~hhp-nIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH 202 (353)
T 4ase_A 124 IGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 202 (353)
T ss_dssp HCCCT-TBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-cEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh
Confidence 97741 12333332 3479999999999999876321 0 1247889999999999
Q ss_pred HCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCc
Q 012042 219 EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSR 298 (472)
Q Consensus 219 ~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~ 298 (472)
+++||||||||.|||++.++.+||+|||+|+.+..... ........++..+++|+.+..+.++.++||||||+
T Consensus 203 ~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~-------~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv 275 (353)
T 4ase_A 203 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 275 (353)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT-------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred hCCeecCccCccceeeCCCCCEEECcchhhhhcccCCC-------ceeeccccccccccCHHHHhcCCCCCcccEeehHH
Confidence 99999999999999999999999999999986532111 01111223333455677667789999999999999
Q ss_pred hhhhhhh-ccCCcc----hh----hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 299 LSFASIS-KTAGFL----DK----EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 299 ~~f~~~t-~~~~~l----~~----~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
++++.+| +..+.. .. .+ .+..++.++.++|.+|++.+|++|||.++-.
T Consensus 276 ~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil 339 (353)
T 4ase_A 276 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339 (353)
T ss_dssp HHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHH
Confidence 9999998 543321 11 01 1345788999999999999999999987653
No 19
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-34 Score=289.72 Aligned_cols=223 Identities=9% Similarity=0.024 Sum_probs=153.3
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|.+ +|+.||||+++... .. ....++|+..+.+|+|+++
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~---------------------~~~~e~Ei~~~~~l~HpNI- 59 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ER---------------------SWFREAEIYQTVMLRHENI- 59 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HH---------------------HHHHHHHHHTSTTCCCTTB-
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hh---------------------hHHHHHHHHHHhcCCCCCC-
Confidence 45679999999999999987 58999999985321 10 0112356776777877653
Q ss_pred cceeeec--------CCceeEEeecCCCChhhhhccC--Ch---HHHHHHHHHHHHHHHHC--------CceeccCCCCc
Q 012042 173 VPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ--NP---DSVFETIIGLVVRLAEH--------GLIHCDFNEFN 231 (472)
Q Consensus 173 vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~--~~---~~i~~qIl~aL~~LH~~--------GIIHrDLKP~N 231 (472)
...++. ...|||||||+|++|.+++... .. ..++.+++.+|.|||++ |||||||||.|
T Consensus 60 -v~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~N 138 (303)
T 3hmm_A 60 -LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138 (303)
T ss_dssp -CCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGG
T ss_pred -CcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCccc
Confidence 333332 1368999999999999986533 11 24788999999999977 99999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC------CCCcchheeccCchhhhhhh
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG------DDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~------~~~~~sDiySlG~~~f~~~t 305 (472)
|||+.++.+||+|||+|+.......... .......++..+++|+.+.+. .++.++||||||+++++++|
T Consensus 139 ILl~~~~~~Ki~DFGla~~~~~~~~~~~-----~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t 213 (303)
T 3hmm_A 139 ILVKKNGTCCIADLGLAVRHDSATDTID-----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213 (303)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTTEES-----CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCEEEEeCCCCccccCCCCcee-----eecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH
Confidence 9999999999999999986543221110 011123444455566654322 36789999999999999998
Q ss_pred ccCCc----------c---------hh---hhhcc----CC---------CHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 306 KTAGF----------L---------DK---ELAAS----GF---------TRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 306 ~~~~~----------l---------~~---~~~~~----~~---------s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+.... . .. .+... .+ ...+.+++.+|++.+|++|||+.|-.
T Consensus 214 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~ 289 (303)
T 3hmm_A 214 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289 (303)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred CCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHH
Confidence 64210 0 00 00001 11 13567899999999999999987643
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.5e-33 Score=300.38 Aligned_cols=221 Identities=18% Similarity=0.177 Sum_probs=172.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+|+.||||+++...... +..+.+|+.+|..|.|+++
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~----------------------~~~~~~Ei~il~~l~hpnI 216 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD----------------------KETVRKEIQTMSVLRHPTL 216 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----------------------HHHHHHHHHHHHHTCCTTB
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhh----------------------HHHHHHHHHHHHhCCCCCC
Confidence 78899999999999999999 579999999986432111 1245689999999988653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC--C
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD--E 238 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~--g 238 (472)
.++++ .+..|||||||+|++|.+++... . ...++.||+.+|.|||++||+||||||+|||++.+ +
T Consensus 217 --v~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~ 294 (573)
T 3uto_A 217 --VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN 294 (573)
T ss_dssp --CCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred --CeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCC
Confidence 33333 26789999999999998865321 1 23488999999999999999999999999999854 7
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.+||+|||+|+.+.... ....++++.++++|+.+.+..++.++|+||+|+++|+++++..++...
T Consensus 295 ~vKl~DFG~a~~~~~~~----------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~ 364 (573)
T 3uto_A 295 ELKLIDFGLTAHLDPKQ----------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364 (573)
T ss_dssp CEEECCCSSCEECCTTS----------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred CEEEeeccceeEccCCC----------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH
Confidence 89999999998764221 122345666667888777888999999999999999999986543210
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ...+++.+.+++|.+||..+|.+||+++|-++
T Consensus 365 ~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 365 LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01 12468899999999999999999999887654
No 21
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.98 E-value=5.5e-32 Score=264.28 Aligned_cols=209 Identities=27% Similarity=0.461 Sum_probs=172.6
Q ss_pred CCCccCccc---ccccccHHHHHHHHhCCceeeecceecccCceeEEEEEe-CCCCE--EEEEEeecCcchhHHhhhhhH
Q 012042 65 SSKYDGFRL---TYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAR-EDGTV--LAMKLHRLGRTSFRAVKSKRD 138 (472)
Q Consensus 65 ~~~y~gy~l---t~~g~d~~al~~l~~~~~i~~i~~~IG~G~fg~VY~a~~-~~g~~--VAVKi~r~~~~sf~~~k~~r~ 138 (472)
...+++|+. ++.+++.+++..+..+|.+|.+.++||+|+||.||+|.+ .+|+. ||||+++.....|.. ...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~---~~~ 94 (258)
T 1zth_A 18 EKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDK---MDE 94 (258)
T ss_dssp TTSTTHHHHHHHHCCHHHHHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC----------GG
T ss_pred ccchhhhhHHHhcCCHHHHHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhh---HHH
Confidence 456777777 777888999999999999999999999999999999998 68999 999999876555543 345
Q ss_pred HhhhccchhhH-----HHhHHHHHHHHHHHHHhhhCCCCcceeeecCCceeEEeecCC-----CChhhhhc---cCChHH
Q 012042 139 YLRHRNSYNWL-----YLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQG-----YPLVQVNQ---LQNPDS 205 (472)
Q Consensus 139 yl~~~~~~~~~-----~~~r~~a~rE~~~L~~L~~~gi~vP~~i~~~~~~LVMEyi~G-----~~L~~l~~---~~~~~~ 205 (472)
|+...+++.|. .....++.+|+.+|.+|.++|+++|.++..+.++|||||+++ ..|.++.. ......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~ 174 (258)
T 1zth_A 95 YLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEG 174 (258)
T ss_dssp GTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHH
T ss_pred hhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHH
Confidence 66555555553 344567899999999999999999999999999999999942 25655432 125567
Q ss_pred HHHHHHHHHHHHH-HCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccc
Q 012042 206 VFETIIGLVVRLA-EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNF 279 (472)
Q Consensus 206 i~~qIl~aL~~LH-~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~ 279 (472)
++.+|+.+|.+|| ++|||||||||+|||+++ .++|||||+|+...||.+..++.||+.++..||.+ +|+..
T Consensus 175 i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~~-~g~~~ 246 (258)
T 1zth_A 175 IFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSK-YGVKA 246 (258)
T ss_dssp HHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHT-TTCCC
T ss_pred HHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCCCccHHHHHHHHHHHHHHHHHH-cCCCC
Confidence 9999999999999 999999999999999987 89999999999999999999999999999999974 57654
No 22
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.98 E-value=2.1e-32 Score=299.85 Aligned_cols=219 Identities=14% Similarity=0.114 Sum_probs=163.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHH---HHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKE---FAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE---~~~L~~L~~ 168 (472)
|++.+.||+|+||.||+|++ .+|+.||||++.... .. .... ...+..| +.++..+.|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~--i~----------~~~~-------~~~~~~E~~~l~ll~~~~H 251 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR--IK----------MKQG-------ETLALNERIMLSLVSTGDC 251 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HH----------HTTC-------HHHHHHHHHHHHHHSSSCC
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHH--cc----------hhhh-------HHHHHHHHHHHHHHhhCCC
Confidence 78899999999999999999 579999999986221 10 0000 0112234 344444444
Q ss_pred CCCCcceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
++| .+.+. .+..|||||||+|++|..++... .+ ..++.||+.||.|||++|||||||||+||||+.+|
T Consensus 252 P~I--V~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 252 PFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329 (689)
T ss_dssp TTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS
T ss_pred CCE--eEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC
Confidence 332 22222 26789999999999998876421 22 24889999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.+||+|||+|+...... ..+++++..+++|+++. +..++.++|+||+|+++|+++++..++...
T Consensus 330 ~vKL~DFGlA~~~~~~~-----------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~ 398 (689)
T 3v5w_A 330 HVRISDLGLACDFSKKK-----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398 (689)
T ss_dssp CEEECCCTTCEECSSCC-----------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC
T ss_pred CEEecccceeeecCCCC-----------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 99999999998664321 22356777777888764 457999999999999999999987654210
Q ss_pred ------hh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 ------EL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 ------~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.+ .+..++.+.+++|.+||..+|.+|++..
T Consensus 399 ~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~ 440 (689)
T 3v5w_A 399 KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440 (689)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCS
T ss_pred HHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCC
Confidence 11 1356899999999999999999999863
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=8.6e-32 Score=266.70 Aligned_cols=223 Identities=16% Similarity=0.219 Sum_probs=171.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++....... ...+.+|+.+|.++.|+++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~~~E~~~l~~l~hp~i 79 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----------------------KELIINEILVMRENKNPNI 79 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC----------------------HHHHHHHHHHHHHCCCTTB
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH----------------------HHHHHHHHHHHhcCCCCCC
Confidence 56779999999999999998 579999999986332111 1234579999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+++++. +..++||||++|++|.+++... . ...++.+++.+|.|||++||+||||||.|||++.++.++|
T Consensus 80 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl 157 (297)
T 3fxz_A 80 --VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL 157 (297)
T ss_dssp --CCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred --CeEeEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEE
Confidence 444442 6689999999999999876432 1 2358899999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---------
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--------- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--------- 313 (472)
+|||++......... .....+...+++|+.+....++.++||||||+++|+++++..+....
T Consensus 158 ~Dfg~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 228 (297)
T 3fxz_A 158 TDFGFCAQITPEQSK---------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (297)
T ss_dssp CCCTTCEECCSTTCC---------BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred eeCCCceecCCcccc---------cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999865432111 11223444445666666788999999999999999999986543110
Q ss_pred -------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++..+.++|.+|+..+|++|||+++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 229 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00134578889999999999999999999887764
No 24
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.97 E-value=3.9e-31 Score=266.93 Aligned_cols=224 Identities=14% Similarity=0.160 Sum_probs=169.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|..+.|+++
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hpnI 76 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPT--------------------SLQKLFREVRIMKILNHPNI 76 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHH--------------------HHHHHHHHHHHHHhCCCCCE
Confidence 67889999999999999998 6899999999863221111 11235689999999998763
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..|+||||++|++|.+++.. .. ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 77 --v~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~k 154 (328)
T 3fe3_A 77 --VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIK 154 (328)
T ss_dssp --CCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred --eeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEE
Confidence 444442 668999999999999887532 11 235889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCC-CcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDD-GSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~-~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||++....... ....+.+...+.+|+.+.+..+ +.++||||+|+++++++++..++...
T Consensus 155 l~DFG~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 224 (328)
T 3fe3_A 155 IADFGFSNEFTVGG----------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 224 (328)
T ss_dssp ECSTTCCGGGSSSC----------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EeeccCceecCCCC----------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999997543211 1223344444456665544444 58999999999999999986543211
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ .+..++..+.++|.+|+..+|.+|||.++-.+.
T Consensus 225 ~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 225 RVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 134578899999999999999999999988764
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=6.7e-31 Score=260.38 Aligned_cols=231 Identities=17% Similarity=0.140 Sum_probs=168.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+++.||+|+||.||+|.+ .+|+.||||++...... ....+.+|+.+|.++.|+++
T Consensus 12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~----------------------~~~~~~~E~~~l~~l~hp~i 69 (310)
T 3s95_A 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEE----------------------TQRTFLKEVKVMRCLEHPNV 69 (310)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHH----------------------HHHHHHHHHHHHTTCCCTTB
T ss_pred eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHH----------------------HHHHHHHHHHHHHhCCCcCc
Confidence 56789999999999999998 57999999987432111 11245689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. +..++||||++|++|.+++... .+ ..++.+|+.+|.|||++||+||||||.|||++.++.+
T Consensus 70 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~ 147 (310)
T 3s95_A 70 --LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNV 147 (310)
T ss_dssp --CCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCE
T ss_pred --ccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCE
Confidence 444442 6689999999999999876431 11 2488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhh-----ccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---
Q 012042 241 TMIDFPQMVSVSHQNAQMYF-----DRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l-----~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--- 312 (472)
+|+|||.+............ ..+......+.++..+.+|+.+....++.++||||||+++++++++......
T Consensus 148 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~ 227 (310)
T 3s95_A 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227 (310)
T ss_dssp EECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSC
T ss_pred EEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhh
Confidence 99999999876533221100 0000111123344444566656678899999999999999999986432211
Q ss_pred -------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.......++..+.++|.+|++.+|++|||.++..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 228 RTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp BCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 01124678889999999999999999999876543
No 26
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.97 E-value=5e-31 Score=261.58 Aligned_cols=232 Identities=16% Similarity=0.158 Sum_probs=165.5
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+. +|+.||||+++...... ....+.+|+.+|.+|.|+++
T Consensus 8 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~hpni 66 (332)
T 3qd2_B 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL---------------------AREKVMREVKALAKLEHPGI 66 (332)
T ss_dssp EEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTT---------------------HHHHHHHHHHHHTSCCCTTB
T ss_pred CceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchh---------------------HHHHHHHHHHHHHhCCCCCE
Confidence 677899999999999999994 79999999987432111 11245689999999988763
Q ss_pred Ccceeeec-------------------------------------------------------------CCceeEEeecC
Q 012042 172 PVPNAVDC-------------------------------------------------------------NRHCVIMSLVQ 190 (472)
Q Consensus 172 ~vP~~i~~-------------------------------------------------------------~~~~LVMEyi~ 190 (472)
+++++. ...++|||||+
T Consensus 67 --v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~ 144 (332)
T 3qd2_B 67 --VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCR 144 (332)
T ss_dssp --CCEEEEEEECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCC
T ss_pred --eeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecC
Confidence 333321 12689999999
Q ss_pred CCChhhhhccCC---------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhc
Q 012042 191 GYPLVQVNQLQN---------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFD 261 (472)
Q Consensus 191 G~~L~~l~~~~~---------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~ 261 (472)
|++|.+++.... ...++.||+.+|.|||++||+||||||.|||++.++.++|+|||++.............
T Consensus 145 ~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~ 224 (332)
T 3qd2_B 145 KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224 (332)
T ss_dssp SSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-------
T ss_pred CCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccc
Confidence 999998764321 23588999999999999999999999999999999999999999998765432111000
Q ss_pred c---ccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----hh-------hccCCCHHHHH
Q 012042 262 R---DVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-----EL-------AASGFTRKDQD 326 (472)
Q Consensus 262 r---D~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-----~~-------~~~~~s~~~~~ 326 (472)
. .........++..+.+|+.+....++.++|+||||+++++++++..+..+. .+ .....+..+.+
T Consensus 225 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 225 TPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHM 304 (332)
T ss_dssp -------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHH
T ss_pred ccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHH
Confidence 0 000111223344445666556678999999999999999999865432111 01 11345667789
Q ss_pred HHHHHHhcCcccCCCCCCCCC
Q 012042 327 VIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 327 ~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+|.+|+..+|++|||+++..+
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999876543
No 27
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=6.5e-31 Score=267.95 Aligned_cols=224 Identities=14% Similarity=0.134 Sum_probs=163.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......-. ...+.+|+.+|+++.|+++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~---------------------~~~~~~Ei~~l~~l~hpnI 70 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD---------------------LPRIKTEIEALKNLRHQHI 70 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------------------------CCHHHHHHHHHHTCCCTTB
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchH---------------------HHHHHHHHHHHHhCCCCCE
Confidence 77889999999999999998 5799999999864321100 0124579999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--C----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--Q----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+++.. . ....++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 71 --v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~k 148 (347)
T 3zgw_A 71 --CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLK 148 (347)
T ss_dssp --CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred --eeEEEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEE
Confidence 444432 568999999999999886532 1 1235889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||+|........ .....+.++..+.+|+.+.+.. ++.++||||+|+++|+++++..++...
T Consensus 149 L~DFG~a~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~ 220 (347)
T 3zgw_A 149 LIDFGLCAKPKGNKD--------YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYK 220 (347)
T ss_dssp ECCCTTCBC----------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEeccCcccccCCCC--------ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 999999875432111 1112233444445666555444 489999999999999999986543211
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ .+..++..+..+|.+|+..+|++|||+++-..
T Consensus 221 ~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 221 KIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHHTCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11 13457888999999999999999999987765
No 28
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.5e-30 Score=257.14 Aligned_cols=223 Identities=12% Similarity=0.104 Sum_probs=164.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++......... ....+.+|+.++.++.|+++
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~l~hp~i 73 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEE-------------------TLKRFEREVHNSSQLSHQNI 73 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHH-------------------HHHHHHHHHHHHTTCCBTTB
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHH-------------------HHHHHHHHHHHHhcCCCCCC
Confidence 77889999999999999998 47999999988643211110 11245689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..|+||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++.++.++
T Consensus 74 --v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 74 --VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp --CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred --ceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 444443 5679999999999999875421 1 234788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh--------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------- 313 (472)
|+|||++.....+.. .....+.++..+++|+.+....++.++|+||||+++|+++++..++...
T Consensus 152 l~Dfg~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~ 223 (294)
T 4eqm_A 152 IFDFGIAKALSETSL--------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK 223 (294)
T ss_dssp ECCCSSSTTC---------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH
T ss_pred EEeCCCccccccccc--------cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999999975432211 1111233444445666566778899999999999999999976433110
Q ss_pred ----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 314 ----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 314 ----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
......++..+.++|.+|++.+|++||++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~ 264 (294)
T 4eqm_A 224 HIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQ 264 (294)
T ss_dssp HHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHH
T ss_pred HhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHH
Confidence 0113567889999999999999999996544
No 29
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.97 E-value=2e-30 Score=258.83 Aligned_cols=224 Identities=11% Similarity=0.032 Sum_probs=162.7
Q ss_pred eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
-|.+.+.||+|+||.||+|.+ +|+.||||++......... ...+.+|+.+|.++.|+++
T Consensus 38 ~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~hp~i 96 (309)
T 3p86_A 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAER--------------------VNEFLREVAIMKRLRHPNI 96 (309)
T ss_dssp GEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHH--------------------HHHHHHHHHHHHHCCCTTB
T ss_pred HceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHH--------------------HHHHHHHHHHHHhCCCCCE
Confidence 367889999999999999977 5889999998643221111 1235679999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccCC-----h----HHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEcC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-----P----DSVFETIIGLVVRLAEHG--LIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-----~----~~i~~qIl~aL~~LH~~G--IIHrDLKP~NILl~~ 236 (472)
+.+++. ...++||||++|++|.+++.... + ..++.+|+.+|.|||++| |+||||||.|||++.
T Consensus 97 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~ 174 (309)
T 3p86_A 97 --VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK 174 (309)
T ss_dssp --CCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT
T ss_pred --eeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC
Confidence 444442 56799999999999998764322 1 247889999999999999 999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
++.++|+|||++.....+. .......+...+.+|+.+....++.++||||||+++++++++..+....
T Consensus 175 ~~~~kL~Dfg~a~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~ 245 (309)
T 3p86_A 175 KYTVKVCDFGLSRLKASTF---------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245 (309)
T ss_dssp TCCEEECCCC--------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH
T ss_pred CCcEEECCCCCCccccccc---------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999999997432211 1111223333445666666778899999999999999999976432110
Q ss_pred ------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...+..++..+.++|.+|+..+|.+|||.++..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 246 QVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0123568899999999999999999999877544
No 30
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=256.84 Aligned_cols=243 Identities=16% Similarity=0.186 Sum_probs=162.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhh-cc---chhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRH-RN---SYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~-~~---~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++............+..... +. ...........+.+|+.+|.+|.
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 67789999999999999998 568999999986432110000000000000 00 00000011234678999999998
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
|+++ +.+++. ...++||||++|++|.++.... . ...++.||+.+|.|||++||+||||||.|||++.
T Consensus 95 h~~i--v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 172 (298)
T 2zv2_A 95 HPNV--VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE 172 (298)
T ss_dssp CTTB--CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred CCCC--CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence 8763 444432 3579999999999988765322 1 2348899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC---CCcchheeccCchhhhhhhccCCcchh
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD---DGSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~---~~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
++.++|+|||++......... .....+...+++|+.+.... .+.++|+||||+++|+++++..+....
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 173 DGHIKIADFGVSNEFKGSDAL---------LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp TSCEEECCCTTCEECSSSSCE---------ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCEEEecCCCcccccccccc---------ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 999999999999865432211 11122333344555443332 478899999999999999986443210
Q ss_pred -------hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ ....++..+.++|.+|+..+|++|||+++-.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l 291 (298)
T 2zv2_A 244 RIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIK 291 (298)
T ss_dssp SHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred cHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 00 1236789999999999999999999987644
No 31
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=1.7e-30 Score=259.02 Aligned_cols=224 Identities=14% Similarity=0.162 Sum_probs=163.1
Q ss_pred eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
-|.+.+.||+|+||.||+|.+.+|+.||||+++....... ....+.+|+.+|.++.|+++
T Consensus 22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hp~i 81 (311)
T 3niz_A 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEG--------------------IPSTAIREISLLKELHHPNI 81 (311)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------C--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccch--------------------hhHHHHHHHHHHHHcCCCCE
Confidence 3778899999999999999998899999999864321110 01235689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. ...++||||++| +|...+... .+ ..++.||+.+|.|||+.||+||||||.|||++.++.+
T Consensus 82 --v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~ 158 (311)
T 3niz_A 82 --VSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGAL 158 (311)
T ss_dssp --CCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCE
T ss_pred --eeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCE
Confidence 444442 567999999997 555543221 11 2478999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
+|+|||++.....+... .....++..+.+|+.+.+ ..++.++||||+|+++++++++..++..
T Consensus 159 kl~Dfg~a~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 229 (311)
T 3niz_A 159 KLADFGLARAFGIPVRS---------YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229 (311)
T ss_dssp EECCCTTCEETTSCCC------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH
T ss_pred EEccCcCceecCCCccc---------ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 99999999865433211 111223334445555433 5689999999999999999997532210
Q ss_pred -h-----------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -K-----------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -~-----------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....+++.++.++|.+||..+|++|||+++-..
T Consensus 230 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 230 PKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 0012357788999999999999999999987655
No 32
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=3e-31 Score=287.63 Aligned_cols=285 Identities=16% Similarity=0.127 Sum_probs=200.4
Q ss_pred CCCCCCHHHHHH-HhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHHHHHHHhCCc---eeeecceecccC
Q 012042 28 NHEIVPSELVHR-IASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKTLVNRGV---FTAVGRQLGVGK 103 (472)
Q Consensus 28 ~~e~Vp~~~i~~-~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~al~~l~~~~~---i~~i~~~IG~G~ 103 (472)
....||.++++. .+++..+.....++.|.+.........+|.+|..+....+++....+....+ -|.+.+.||+|+
T Consensus 117 ~~~~v~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~f~~~~~LG~G~ 196 (576)
T 2acx_A 117 LIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGG 196 (576)
T ss_dssp SSTTCCHHHHHHHHHHHHHCCCTTTTHHHHHHHHHHHTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEEET
T ss_pred ccccCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHhhccCcchhhcchhhhhhhhhhhhhhhcCccccceEEEEEEeeCC
Confidence 445689999887 6666554344444444433222223345666655544455555555554443 378889999999
Q ss_pred ceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceeee----
Q 012042 104 ESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVD---- 178 (472)
Q Consensus 104 fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i~---- 178 (472)
||.||+|.+ .+|+.||||++.... ... . .....+.+|+.+|.++.|+++ +.++.
T Consensus 197 fG~Vy~a~~~~tg~~vAvK~l~k~~--~~~----------~-------~~~~~~~~E~~iL~~l~hp~I--v~l~~~~~~ 255 (576)
T 2acx_A 197 FGEVCACQVRATGKMYACKKLEKKR--IKK----------R-------KGEAMALNEKQILEKVNSRFV--VSLAYAYET 255 (576)
T ss_dssp TEEEEEEEETTTCCEEEEEEEEHHH--HHH----------T-------TCHHHHHHHHHHHHHCCCTTB--CCEEEEEEC
T ss_pred CEEEEEEEECCCCCEEEEEEEEhHh--hhh----------h-------HHHHHHHHHHHHHHHcCCCCE--eeEEEEEee
Confidence 999999998 579999999985221 000 0 011235679999999988653 33333
Q ss_pred cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 179 CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 179 ~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
.+..||||||++|++|..++... .+ ..++.+|+.+|.|||++|||||||||.||||+.+|.++|+|||+|..
T Consensus 256 ~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~ 335 (576)
T 2acx_A 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH 335 (576)
T ss_dssp SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEeccccee
Confidence 26689999999999998865321 22 24788999999999999999999999999999999999999999986
Q ss_pred cCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----------hhh----
Q 012042 251 VSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-----------KEL---- 315 (472)
Q Consensus 251 ~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----------~~~---- 315 (472)
..... ....+.++..+++|+.+....++.++|+||||+++|+++++..++.. ..+
T Consensus 336 ~~~~~----------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~ 405 (576)
T 2acx_A 336 VPEGQ----------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405 (576)
T ss_dssp CCTTC----------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC
T ss_pred cccCc----------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc
Confidence 53221 11122344445566666667899999999999999999997643311 001
Q ss_pred --hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 316 --AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 316 --~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
....++.+++.+|.+||..+|.+||+..
T Consensus 406 ~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~ 435 (576)
T 2acx_A 406 EEYSERFSPQARSLCSQLLCKDPAERLGCR 435 (576)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred ccCCccCCHHHHHHHHHhccCCHHHcCCCC
Confidence 1245889999999999999999999643
No 33
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.97 E-value=1.2e-30 Score=256.45 Aligned_cols=224 Identities=12% Similarity=0.134 Sum_probs=162.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+|+.||||+++.....-. ....+.+|+.+|.++.|+++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 63 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG--------------------VPSSALREICLLKELKHKNI 63 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT--------------------HHHHHHHHHHHHTTCCCTTB
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCC--------------------cchHHHHHHHHHhcCCCCCE
Confidence 67789999999999999999 4799999999874432111 01234579999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..+|||||++|..+..+... .. ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 64 --v~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~k 141 (292)
T 3o0g_A 64 --VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELK 141 (292)
T ss_dssp --CCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred --eeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 444432 567999999998555444321 11 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcch-----h--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLD-----K-- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~-- 313 (472)
|+|||.+.....+.. ......++..+.+|+.+.+ ..++.++||||||+++++++++..+... .
T Consensus 142 l~Dfg~~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~ 212 (292)
T 3o0g_A 142 LANFGLARAFGIPVR---------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212 (292)
T ss_dssp ECCCTTCEECCSCCS---------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHH
T ss_pred EeecccceecCCccc---------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHH
Confidence 999999986543211 1111222333445555444 3489999999999999999976433110 0
Q ss_pred -hh-----------------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -EL-----------------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -~~-----------------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++..+.++|.+||..+|++|||+++-.+
T Consensus 213 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 213 KRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 01246788899999999999999999877554
No 34
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=8.6e-31 Score=263.07 Aligned_cols=220 Identities=13% Similarity=0.166 Sum_probs=168.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||+|++...... ...+.+|+.+|..+.|+++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-----------------------~~~~~~E~~~l~~l~hpnI 63 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-----------------------QVLVKKEISILNIARHRNI 63 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH-----------------------HHHHHHHHHHHHHSCCTTB
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCccc-----------------------HHHHHHHHHHHHhCCCCCC
Confidence 67789999999999999998 46899999998643211 1235689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC--CC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD--DE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~--~g 238 (472)
+.+++. +..++||||++|++|.+.+... .+ ..++.||+.+|.|||++||+||||||.|||++. ++
T Consensus 64 --v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~ 141 (321)
T 1tki_A 64 --LHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS 141 (321)
T ss_dssp --CCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred --CeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCC
Confidence 444432 6789999999999998876432 12 248899999999999999999999999999986 78
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h--
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K-- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~-- 313 (472)
.++|+|||++........ ....++..++++|+.+....++.++|+||||+++|+++++..++.. .
T Consensus 142 ~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 211 (321)
T 1tki_A 142 TIKIIEFGQARQLKPGDN----------FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211 (321)
T ss_dssp CEEECCCTTCEECCTTCE----------EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred CEEEEECCCCeECCCCCc----------cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH
Confidence 999999999986542211 1122344455566665666789999999999999999998654311 0
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++.++.++|.+|+..+|.+|||+++...
T Consensus 212 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 11367889999999999999999999987665
No 35
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=1.2e-30 Score=256.41 Aligned_cols=224 Identities=13% Similarity=0.067 Sum_probs=162.1
Q ss_pred eeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|++.+.||+|+||.||+|.. .+|+.||||+++...... ...+.+|+.+|.++.
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~l~ 69 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----------------------LRDFEREIEILKSLQ 69 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHH----------------------HHHHHHHHHHHHTCC
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHH----------------------HHHHHHHHHHHHhCC
Confidence 67889999999999999983 368899999986432111 123568999999998
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
|+++ +.+++. ...++||||++|++|.+++... . ...++.+++.+|.|||+.||+||||||.|||+
T Consensus 70 h~~i--v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~ 147 (295)
T 3ugc_A 70 HDNI--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147 (295)
T ss_dssp CTTB--CCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCCE--eeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE
Confidence 8653 444432 4578999999999999876432 1 12478999999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
+.++.++|+|||++........... ......++.+.++|+.+....++.++||||||+++++++++..+...
T Consensus 148 ~~~~~~kl~Dfg~~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~ 221 (295)
T 3ugc_A 148 ENENRVKIGDFGLTKVLPQDKEFFK------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221 (295)
T ss_dssp EETTEEEECCCCSCC-------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH
T ss_pred cCCCeEEEccCcccccccCCcceee------eccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh
Confidence 9999999999999976532211100 00011122234566655667899999999999999999985321100
Q ss_pred ----------------------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 ----------------------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ----------------------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.......++.++.++|.+|+..+|++|||+++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~ 283 (295)
T 3ugc_A 222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 283 (295)
T ss_dssp HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 0001346888999999999999999999987643
No 36
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=2.2e-30 Score=264.74 Aligned_cols=223 Identities=15% Similarity=0.190 Sum_probs=168.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......... ...+.+|+.+|.+|.|+++
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------------------~~~~~~E~~il~~l~hpnI 90 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD--------------------FQKLEREARICRKLQHPNI 90 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHH--------------------HHHHHHHHHHHHHCCCTTB
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHH--------------------HHHHHHHHHHHHhCCCCCC
Confidence 78889999999999999998 47999999998743321111 1235689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC---C
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD---E 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~---g 238 (472)
+++++. +..|+||||++|++|.+.+... ....++.||+.+|.|||++||+||||||.|||++.+ +
T Consensus 91 --v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~ 168 (362)
T 2bdw_A 91 --VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168 (362)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTC
T ss_pred --CeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence 444442 5689999999999998765322 123588999999999999999999999999999854 4
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||++....... ....+.+...+++|+.+....++.++||||||+++|+++++..++...
T Consensus 169 ~~kl~DfG~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~ 238 (362)
T 2bdw_A 169 AVKLADFGLAIEVNDSE----------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 238 (362)
T ss_dssp CEEECCCTTCBCCTTCC----------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred CEEEeecCcceEecCCc----------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 59999999997654221 111233444555666666678999999999999999999986543210
Q ss_pred --hhh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --ELA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+. ...++.++.++|.+||..+|++||++++...
T Consensus 239 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 239 YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 010 1356888999999999999999999877665
No 37
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=2e-30 Score=259.97 Aligned_cols=223 Identities=15% Similarity=0.203 Sum_probs=169.4
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.....||+|+||.||+|.+. +|+.||||+++...... ...+.+|+.+|.++.|+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~l~h~ni 104 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR----------------------RELLFNEVVIMRDYQHFNV 104 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS----------------------HHHHHHHHHHHTTCCCTTB
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH----------------------HHHHHHHHHHHHhCCCCCc
Confidence 566679999999999999985 79999999987432111 1134579999999988764
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.++. .+..++||||++|++|.+++... . ...++.+|+.+|.|||+.||+||||||.|||++.++.++|
T Consensus 105 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 182 (321)
T 2c30_A 105 --VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKL 182 (321)
T ss_dssp --CCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred --ceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEE
Confidence 33333 26789999999999999876432 1 2348899999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------hh
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------EL 315 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~ 315 (472)
+|||++........ ....+.++..+++|+.+....++.++|+||||+++++++++..+.... .+
T Consensus 183 ~Dfg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~ 253 (321)
T 2c30_A 183 SDFGFCAQISKDVP---------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL 253 (321)
T ss_dssp CCCTTCEECCSSSC---------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred eeeeeeeecccCcc---------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999986543211 111223344445666556778999999999999999999976432110 00
Q ss_pred ---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 316 ---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 316 ---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
....++..+.++|.+|+..+|++|||+++..+.
T Consensus 254 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 254 RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 123578889999999999999999999887653
No 38
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=1.6e-30 Score=266.32 Aligned_cols=228 Identities=17% Similarity=0.184 Sum_probs=171.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+++.||+|+||.||+|.+ .+|+.||||+++........ .......+.+|+.+|.++.|+++
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~----------------~~~~~~~~~~E~~il~~l~hpnI 77 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR----------------RGVCREEIEREVSILRQVLHPNI 77 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS----------------SSBCHHHHHHHHHHHTTCCCTTB
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc----------------chhHHHHHHHHHHHHHhCCCcCC
Confidence 77889999999999999998 47999999998743211100 00011245689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC---
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE--- 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g--- 238 (472)
+.+++. ...++||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.++
T Consensus 78 --v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~ 155 (361)
T 2yab_A 78 --ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI 155 (361)
T ss_dssp --CCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSS
T ss_pred --CcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCc
Confidence 444442 5679999999999999876432 1 234889999999999999999999999999998766
Q ss_pred -cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h-
Q 012042 239 -KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K- 313 (472)
Q Consensus 239 -~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~- 313 (472)
.++|+|||++....... ....++++..+++|+.+....++.++|+||||+++|+++++..++.. .
T Consensus 156 ~~vkl~DFG~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~ 225 (361)
T 2yab_A 156 PHIKLIDFGLAHEIEDGV----------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225 (361)
T ss_dssp CCEEECCCSSCEECCTTC----------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred cCEEEEecCCceEcCCCC----------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 79999999998654321 11223445555667766677899999999999999999998654321 0
Q ss_pred ---hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ ....++..++++|.+||..+|.+|||+++-..-
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01 114578889999999999999999999877653
No 39
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=259.57 Aligned_cols=228 Identities=18% Similarity=0.201 Sum_probs=170.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......... .......+.+|+.+|.+|.|+++
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------~~~~~~~~~~E~~~l~~l~hp~i 76 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR----------------RGVSREDIEREVSILKEIQHPNV 76 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS----------------SSBCHHHHHHHHHHHHHCCCTTB
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc----------------chhhHHHHHHHHHHHHhCCCCCC
Confidence 77889999999999999998 47999999998643211100 00012245689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC---
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE--- 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g--- 238 (472)
+.+++. ...++||||++|++|.+++... . ...++.+|+.+|.|||++||+||||||.|||++.++
T Consensus 77 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~ 154 (326)
T 2y0a_A 77 --ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154 (326)
T ss_dssp --CCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSS
T ss_pred --CcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCC
Confidence 444432 5689999999999999876432 1 234889999999999999999999999999998777
Q ss_pred -cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h-
Q 012042 239 -KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K- 313 (472)
Q Consensus 239 -~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~- 313 (472)
.++|+|||++........ ....+++..+++|+.+....++.++|+||||+++|+++++..++.. .
T Consensus 155 ~~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 224 (326)
T 2y0a_A 155 PRIKIIDFGLAHKIDFGNE----------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224 (326)
T ss_dssp CCEEECCCTTCEECCTTSC----------CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred CCEEEEECCCCeECCCCCc----------cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence 799999999986542211 1122344444566665667899999999999999999998654311 0
Q ss_pred ---hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ ....++..+.++|.+|+..+|++|||+++....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 124678889999999999999999998876653
No 40
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=2.7e-30 Score=262.10 Aligned_cols=220 Identities=14% Similarity=0.122 Sum_probs=164.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.... . .. .....+.+|+.+|..+.|+++
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~--~---------~~--------~~~~~~~~E~~~l~~l~hp~i 67 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI--I---------AK--------DEVAHTVTESRVLQNTRHPFL 67 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--H---------HT--------TCHHHHHHHHHHHHSCCCTTB
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh--h---------hh--------hHHHHHHHHHHHHHhCCCCcC
Confidence 56789999999999999998 4799999999863210 0 00 001234579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. .+..|+||||++|++|..++... .+ ..++.+|+.+|.|||++||+||||||.|||++.+|.++
T Consensus 68 --v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vk 145 (337)
T 1o6l_A 68 --TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp --CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred --cceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEE
Confidence 33333 26789999999999998765321 12 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||+++...... .....+.++..+++|+.+....++.++|+||||+++|+++++..+.... .
T Consensus 146 L~DFG~a~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~ 216 (337)
T 1o6l_A 146 ITDFGLCKEGISDG---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216 (337)
T ss_dssp ECCCTTCBCSCCTT---------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EeeccchhhcccCC---------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99999997532211 1122334444555677666788999999999999999999986543210 1
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
+ .+..++.++.++|.+||..+|++||+.
T Consensus 217 i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~ 250 (337)
T 1o6l_A 217 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250 (337)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCC
Confidence 1 135688999999999999999999953
No 41
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=272.30 Aligned_cols=226 Identities=17% Similarity=0.197 Sum_probs=170.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||+|++......... ...+.+|+.+|.+|.|+++
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~--------------------~~~~~~E~~il~~l~hpnI 72 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD--------------------HQKLEREARICRLLKHPNI 72 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHH--------------------HHHHHHHHHHHHHCCBTTB
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHH--------------------HHHHHHHHHHHHhCCCcCC
Confidence 77889999999999999998 57999999998754322111 1245689999999988763
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc---CCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID---DDE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~---~~g 238 (472)
+.+++. +..|+||||++|++|.+.+... . ...++.||+.+|.|||++||+||||||+|||++ .++
T Consensus 73 --v~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~ 150 (444)
T 3soa_A 73 --VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGA 150 (444)
T ss_dssp --CCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTC
T ss_pred --CeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCC
Confidence 444442 6689999999999998765322 1 235889999999999999999999999999998 457
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||+|.....+.. ....+.++.++++|+.+....++.++||||+|+++|+++++..++...
T Consensus 151 ~vkL~DFG~a~~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~ 221 (444)
T 3soa_A 151 AVKLADFGLAIEVEGEQQ---------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL 221 (444)
T ss_dssp CEEECCCSSCBCCCTTCC---------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cEEEccCceeEEecCCCc---------eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 899999999976543211 112234455556666666678999999999999999999986543110
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+ ....++.++.++|.+||..+|++|||+.+.....
T Consensus 222 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 222 YQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 01 0136789999999999999999999998876643
No 42
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=9e-31 Score=260.19 Aligned_cols=228 Identities=17% Similarity=0.173 Sum_probs=164.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++........ ....+.+|+.++.++.|+++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------~~~~~~~E~~~l~~l~hp~i 74 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPS-------------------FYLRFRREAQNAAALNHPAI 74 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHH-------------------HHHHHHHHHTTCCCCCCTTB
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHH-------------------HHHHHHHHHHHHHcCCCCCc
Confidence 67889999999999999998 57999999998643211110 11235679999999987653
Q ss_pred Ccceeeec----CC----ceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----NR----HCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----~~----~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+++. .. .|+||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.+
T Consensus 75 --v~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~ 152 (311)
T 3ork_A 75 --VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152 (311)
T ss_dssp --CCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETT
T ss_pred --ceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCC
Confidence 444442 22 39999999999998876421 1 23488999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----- 312 (472)
+.++|+|||++......... ......+.+...+++|+.+....++.++||||||+++|+++++..++..
T Consensus 153 ~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~ 226 (311)
T 3ork_A 153 NAVKVMDFGIARAIADSGNS------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226 (311)
T ss_dssp SCEEECCCSCC------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred CCEEEeeccCcccccccccc------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 99999999999765422110 1111223344444566666677899999999999999999997643210
Q ss_pred ------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......+++.++.++|.+|+..+|++||++.+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred HHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 01113468999999999999999999999887654
No 43
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=1.6e-30 Score=263.96 Aligned_cols=228 Identities=13% Similarity=0.144 Sum_probs=167.6
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.+.||+|+||.||+|.+ .+|+.||||+++... +.. . . ......+.+|+.+|..|.|++
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~---------~-~-----~~~~~~~~~E~~~l~~l~hpn 87 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK--FTS---------S-P-----GLSTEDLKREASICHMLKHPH 87 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHT---------S-S-----SCCHHHHHHHHHHHHHCCCTT
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhh--ccc---------c-c-----cchHHHHHHHHHHHHhCCCCC
Confidence 378899999999999999998 579999999985321 000 0 0 001124568999999998875
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ +.+++. +..|||||||+|++|...+.. ..+ ..++.||+.+|.|||++||+||||||.|||++.
T Consensus 88 I--v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~ 165 (351)
T 3c0i_A 88 I--VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 165 (351)
T ss_dssp B--CCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECS
T ss_pred C--CcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEec
Confidence 3 444442 567999999999999765421 112 247899999999999999999999999999986
Q ss_pred CCc---EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh
Q 012042 237 DEK---VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 237 ~g~---vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
++. ++|+|||++........ ......++..+++|+.+....++.++||||||+++|+++++..++...
T Consensus 166 ~~~~~~vkl~Dfg~a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 166 KENSAPVKLGGFGVAIQLGESGL---------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp SSTTCCEEECCCTTCEECCTTSC---------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred CCCCCcEEEecCcceeEecCCCe---------eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 554 99999999986643211 011223444455666666778999999999999999999986443110
Q ss_pred ------hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++.++.++|.+||..+|++|||+.+...
T Consensus 237 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 237 KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 11467889999999999999999999877654
No 44
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=3.3e-30 Score=264.35 Aligned_cols=233 Identities=15% Similarity=0.177 Sum_probs=158.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|.++. |++
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--------------------~~~~~~~E~~~l~~l~~h~n 70 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST--------------------DAQRTFREIMILTELSGHEN 70 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHH--------------------HHHHHHHHHHHHHHTTTCTT
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChH--------------------HHHHHHHHHHHHHhccCCCC
Confidence 67889999999999999998 5799999998753211110 1123457999999997 654
Q ss_pred CCcceeeec------CCceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +.+++. ...|+||||++| +|..++... . ...++.||+.+|.|||++||+||||||.|||++.++.
T Consensus 71 i--v~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~ 147 (388)
T 3oz6_A 71 I--VNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH 147 (388)
T ss_dssp B--CCEEEEEECTTSSCEEEEEECCSE-EHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred C--CeeeeEEecCCCCEEEEEecccCc-CHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCC
Confidence 3 344332 257999999985 676655322 1 2247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccch------------hhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhc
Q 012042 240 VTMIDFPQMVSVSHQNAQ------------MYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~------------~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~ 306 (472)
++|+|||+|+........ ..+..+......+.++.++.+|+.+.+ ..++.++||||+|+++++++++
T Consensus 148 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g 227 (388)
T 3oz6_A 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227 (388)
T ss_dssp EEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred EEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhC
Confidence 999999999865431110 001111222344556666667766544 6789999999999999999997
Q ss_pred cCCcchh-------hh-----------------------------------------------------hccCCCHHHHH
Q 012042 307 TAGFLDK-------EL-----------------------------------------------------AASGFTRKDQD 326 (472)
Q Consensus 307 ~~~~l~~-------~~-----------------------------------------------------~~~~~s~~~~~ 326 (472)
...+... .+ ....++.++.+
T Consensus 228 ~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (388)
T 3oz6_A 228 KPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALD 307 (388)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHH
Confidence 6432100 00 01166888999
Q ss_pred HHHHHHhcCcccCCCCCCCCCC
Q 012042 327 VIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 327 ~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
+|.+||..+|++|||+++-..-
T Consensus 308 ll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 308 LLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHhhccCcccCCCHHHHhCC
Confidence 9999999999999999887663
No 45
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=2.4e-30 Score=251.00 Aligned_cols=220 Identities=12% Similarity=0.024 Sum_probs=164.1
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.+++.||||+++...... ..+.+|+.+|.++.|+++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~h~~i- 67 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-----------------------EDFIEEAEVMMKLSHPKL- 67 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH-----------------------HHHHHHHHHHHTCCCTTB-
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEecccccCH-----------------------HHHHHHHHHHHhCCCCCE-
Confidence 67789999999999999999888899999987443211 134579999999988653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+++... .. ..++.+++.+|.+||+.||+||||||.|||++.++.++
T Consensus 68 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~k 146 (269)
T 4hcu_A 68 -VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK 146 (269)
T ss_dssp -CCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEE
T ss_pred -eeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEE
Confidence 444443 5679999999999999876432 11 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD-------K 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~-------~ 313 (472)
|+|||.+.....+.... ...........+|+.+....++.++|+||+|++++++++ +..+... .
T Consensus 147 l~Dfg~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~ 218 (269)
T 4hcu_A 147 VSDFGMTRFVLDDQYTS--------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 218 (269)
T ss_dssp ECCTTGGGGBCCHHHHS--------TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred ecccccccccccccccc--------ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 99999997543221100 000111112235555556789999999999999999998 5432211 0
Q ss_pred -------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
......++..+..+|.+|+..+|++|||+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 257 (269)
T 4hcu_A 219 DISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRL 257 (269)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 01134478889999999999999999998764
No 46
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.96 E-value=5.8e-30 Score=250.88 Aligned_cols=227 Identities=14% Similarity=0.137 Sum_probs=166.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++...... ..+.+|+.++.++.++ -
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~e~~~~~~l~~~-~ 66 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA------------------------PQLRDEYRTYKLLAGC-T 66 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS------------------------CCHHHHHHHHHHTTTC-T
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc------------------------HHHHHHHHHHHHHhcC-C
Confidence 67889999999999999998 57999999988532110 0134689999999432 2
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc-
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK- 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~- 239 (472)
.+|+++.+ ...++||||+ |++|.+++... .+ ..++.||+.+|.+||++||+||||||.|||++.++.
T Consensus 67 ~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~ 145 (298)
T 1csn_A 67 GIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSK 145 (298)
T ss_dssp TCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSST
T ss_pred CCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCC
Confidence 35666654 5679999999 99998876421 12 248899999999999999999999999999987665
Q ss_pred ----EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---
Q 012042 240 ----VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--- 312 (472)
Q Consensus 240 ----vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--- 312 (472)
++|+|||++.....+....... ......+.+...+.+|+.+....++.++||||||+++++++++..+...
T Consensus 146 ~~~~~kl~Dfg~~~~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 223 (298)
T 1csn_A 146 NANMIYVVDFGMVKFYRDPVTKQHIP--YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 223 (298)
T ss_dssp TTTCEEECCCTTCEESBCTTTCCBCC--CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred CCCeEEEEECcccccccccccccccc--ccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc
Confidence 9999999998765432211110 0011122333334456655677889999999999999999997643211
Q ss_pred -------h-----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -------K-----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -------~-----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....+++.++.++|.+|++.+|++||+.++-.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 224 ATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp CCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred cccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 0 0112478999999999999999999999876543
No 47
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.96 E-value=1.9e-30 Score=254.72 Aligned_cols=223 Identities=13% Similarity=0.147 Sum_probs=161.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.+|+.||||+++........ ...+.+|+.+|.++.|+++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i- 62 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGI--------------------PSTTIREISILKELKHSNI- 62 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCC--------------------CHHHHHHHHGGGGCCCTTB-
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccccc--------------------chhHHHHHHHHHhcCCCCE-
Confidence 6778999999999999999988999999998644211100 0134579999999988653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++| +|.+++... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 63 -v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 140 (288)
T 1ob3_A 63 -VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELK 140 (288)
T ss_dssp -CCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred -eeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEE
Confidence 444442 678999999997 676654321 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||.+.....+.. ......++....+|+.+.. ..++.++|+||||+++|+++++...+...
T Consensus 141 l~Dfg~~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 211 (288)
T 1ob3_A 141 IADFGLARAFGIPVR---------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211 (288)
T ss_dssp ECCTTHHHHHCC------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EeECccccccCcccc---------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999875432211 1111223333445554433 56899999999999999999975432100
Q ss_pred -----------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.....+++..+.++|.+||..+|++|||+++..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 212 RIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp HHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0011357788899999999999999999877544
No 48
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96 E-value=3.5e-30 Score=262.88 Aligned_cols=221 Identities=15% Similarity=0.123 Sum_probs=162.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++... ... ........+|..+|..+. |++
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~--~~~-----------------~~~~~~~~~E~~il~~~~~hp~ 85 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV--ILQ-----------------DDDVECTMTEKRILSLARNHPF 85 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--HHH-----------------HTTHHHHHHHHHHHHHTTTCTT
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH--hcc-----------------hhHHHHHHHHHHHHHhccCCCc
Confidence 67789999999999999998 469999999986321 000 001123557899998884 543
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
++.++.. +..||||||++|++|..++.. .. ...++.+|+.+|.|||++||+||||||.|||++.+|.+
T Consensus 86 --Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~i 163 (353)
T 3txo_A 86 --LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHC 163 (353)
T ss_dssp --BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred --eeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCE
Confidence 2333332 668999999999999887532 11 22478999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------h
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------K 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~ 313 (472)
+|+|||+|+...... .....+.++..+++|+.+....++.++|+||||+++|+++++..++.. .
T Consensus 164 kL~DFG~a~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~ 234 (353)
T 3txo_A 164 KLADFGMCKEGICNG---------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234 (353)
T ss_dssp EECCCTTCBCSCC------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEccccceeecccCC---------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999997432111 112233445555566666667789999999999999999998654321 0
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.+ .+..++..+.++|.+||..+|.+||++.
T Consensus 235 ~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~ 270 (353)
T 3txo_A 235 AILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSL 270 (353)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSG
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCc
Confidence 11 1345788999999999999999999983
No 49
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.96 E-value=1.1e-29 Score=253.29 Aligned_cols=218 Identities=16% Similarity=0.183 Sum_probs=164.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.... ..+.+|+.+|.+|. |++
T Consensus 38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~E~~~l~~l~~~~~ 92 (330)
T 3nsz_A 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-------------------------KKIKREIKILENLRGGPN 92 (330)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCH-------------------------HHHHHHHHHHHHHTTSTT
T ss_pred eEEEEEecccCCeEEEEEEECCCCcEEEEEEecccch-------------------------HHHHHHHHHHHHcCCCCC
Confidence 78889999999999999998 5799999999863210 13457999999997 544
Q ss_pred CCcceeeec------CCceeEEeecCCCChhhhhccCCh---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC-cE
Q 012042 171 FPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQNP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE-KV 240 (472)
Q Consensus 171 i~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g-~v 240 (472)
+ +.+++. ...++||||++|++|..+...... ..++.||+.+|.|||++||+||||||.|||++.++ .+
T Consensus 93 i--~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~ 170 (330)
T 3nsz_A 93 I--ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 170 (330)
T ss_dssp B--CCEEEEEECTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEE
T ss_pred E--EEeeeeeccCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEE
Confidence 3 333332 456899999999999887653322 34889999999999999999999999999999666 89
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||+|........ .....+..+..+|+.+.. ..++.++||||||+++++++++..+....
T Consensus 171 kl~Dfg~a~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~ 240 (330)
T 3nsz_A 171 RLIDWGLAEFYHPGQE----------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240 (330)
T ss_dssp EECCCTTCEECCTTCC----------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHH
T ss_pred EEEeCCCceEcCCCCc----------cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHH
Confidence 9999999976532211 111223334445665544 67899999999999999999976433100
Q ss_pred -----------h----h------------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----------E----L------------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----------~----~------------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. + ....++.++.++|.+||..+|++|||+++..+
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 241 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 0 01127889999999999999999999987655
No 50
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.96 E-value=1.1e-29 Score=248.64 Aligned_cols=228 Identities=13% Similarity=0.126 Sum_probs=166.8
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||++...... ..+.+|+.++..+.|+.
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~e~~~l~~l~~~~ 65 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------------------------PQLHIESKIYKMMQGGV 65 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC------------------------CHHHHHHHHHHHHTTST
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch------------------------hHHHHHHHHHHHhhcCC
Confidence 367889999999999999998 67999999988643210 02357999999998764
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEE---cC
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI---DD 236 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl---~~ 236 (472)
+ +|.+..+ ...++||||+ |++|.+++.. ..+ ..++.+|+.+|.|||++||+||||||.|||+ +.
T Consensus 66 ~-i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~ 143 (296)
T 3uzp_A 66 G-IPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 143 (296)
T ss_dssp T-CCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGG
T ss_pred C-CCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCC
Confidence 2 3333222 5568999999 8899887641 111 2488999999999999999999999999999 47
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
++.++|+|||++............ .......+.+.....+|+.+....++.++||||||+++++++++..+...
T Consensus 144 ~~~~kl~Dfg~~~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 221 (296)
T 3uzp_A 144 GNLVYIIDFGLAKKYRDARTHQHI--PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA 221 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBC--CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS
T ss_pred CCeEEEeeCCCccccccccccccc--ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch
Confidence 889999999999876533221100 00011122333334456655677899999999999999999997643211
Q ss_pred -------h----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -------K----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -------~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ......++.++.++|.+|++.+|++|||+++-.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 222 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp SSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 0 0112678999999999999999999999877644
No 51
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=6.6e-30 Score=260.20 Aligned_cols=222 Identities=14% Similarity=0.083 Sum_probs=164.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++...... . ........|..+|..+ .|++
T Consensus 19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-----------~--------~~~~~~~~E~~il~~~~~hp~ 79 (345)
T 1xjd_A 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-----------D--------DDVECTMVEKRVLSLAWEHPF 79 (345)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-----------T--------TCHHHHHHHHHHHHHHTTCTT
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-----------h--------hhHHHHHHHHHHHHhcCCCCC
Confidence 66789999999999999998 469999999986321000 0 0012345688888877 5544
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ ++++.. ...|+||||++|++|..++.. .. ...++.||+.+|.|||++||+||||||.|||++.+|.+
T Consensus 80 i--v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~v 157 (345)
T 1xjd_A 80 L--THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHI 157 (345)
T ss_dssp B--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred C--CcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCE
Confidence 2 333332 568999999999999887642 11 23478999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||+|+....... ....+.++..+++|+.+.+..++.++|+||||+++|+++++..++...
T Consensus 158 kL~DFG~a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~ 228 (345)
T 1xjd_A 158 KIADFGMCKENMLGDA---------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228 (345)
T ss_dssp EECCCTTCBCCCCTTC---------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEeEChhhhhcccCCC---------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999999975321111 112234444455666666778999999999999999999986543210
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
.+ .+..++.++.++|.+||..+|++||+..+
T Consensus 229 ~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~ 265 (345)
T 1xjd_A 229 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG 265 (345)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBS
T ss_pred HHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChH
Confidence 11 13457889999999999999999999973
No 52
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.96 E-value=7.3e-30 Score=248.80 Aligned_cols=223 Identities=16% Similarity=0.198 Sum_probs=167.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......... ...+.+|+.++.++.|+++
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~e~~~l~~l~h~~i 67 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD--------------------FQKLEREARICRKLQHPNI 67 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHH--------------------HHHHHHHHHHHHHCCCTTB
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHH--------------------HHHHHHHHHHHHHcCCCCc
Confidence 67789999999999999998 46999999998643221111 1235689999999988763
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc--
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK-- 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~-- 239 (472)
+.+++. +..++||||++|++|...+... ....++.+++.+|.+||+.||+||||||.|||++.++.
T Consensus 68 --~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~ 145 (284)
T 3kk8_A 68 --VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145 (284)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTC
T ss_pred --CeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCC
Confidence 444442 5679999999999987754321 12348899999999999999999999999999986555
Q ss_pred -EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 240 -VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 240 -vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
++|+|||.+.....+... ..+.+.....+|+.+....++.++|+||||+++++++++..+....
T Consensus 146 ~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 215 (284)
T 3kk8_A 146 AVKLADFGLAIEVNDSEAW----------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215 (284)
T ss_dssp CEEECCCTTCEECCSSCBC----------CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred cEEEeeceeeEEcccCccc----------cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH
Confidence 999999999766433211 1122333334566556777899999999999999999976443110
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++.++.++|.+|+..+|++|||+++...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 216 YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 01367889999999999999999999988876
No 53
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.96 E-value=3.8e-30 Score=258.32 Aligned_cols=227 Identities=13% Similarity=0.123 Sum_probs=167.5
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||++......- ....+.+|+.++..+.|+++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~hpnI 67 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD---------------------CPENIKKEICINKMLNHENV 67 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------------------------CHHHHHHHHHHCCCTTB
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc---------------------hHHHHHHHHHHHHhCCCCCC
Confidence 677899999999999999984 79999999986432110 01124579999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..|+||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 68 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~k 145 (323)
T 3tki_A 68 --VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145 (323)
T ss_dssp --CCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred --CeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEE
Confidence 444443 5679999999999998876532 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcch-----h--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLD-----K-- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~-----~-- 313 (472)
|+|||.+.....+..... ...+.++..+++|+.+.... .+.++||||||+++++++++..+... .
T Consensus 146 l~Dfg~a~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 218 (323)
T 3tki_A 146 ISDFGLATVFRYNNRERL-------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218 (323)
T ss_dssp ECCCTTCEECEETTEECC-------BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH
T ss_pred EEEeeccceeccCCcccc-------cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence 999999976532221111 11223333444555544444 47789999999999999997643210 0
Q ss_pred -h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
. .....++..+.++|.+||..+|++|||+++..+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 0 01145788899999999999999999998887754
No 54
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.96 E-value=7.4e-30 Score=261.60 Aligned_cols=234 Identities=12% Similarity=0.052 Sum_probs=169.7
Q ss_pred Cceeeecceeccc--CceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 90 GVFTAVGRQLGVG--KESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 90 ~~i~~i~~~IG~G--~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+--|++.+.||+| +||.||+|.+. +|+.||||+++.....-. ....+.+|+.+|+++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l 83 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNE--------------------MVTFLQGELHVSKLF 83 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHH--------------------HHHHHHHHHHHHHHC
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChH--------------------HHHHHHHHHHHHHhC
Confidence 3458889999999 99999999994 799999999864321111 112456899999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
.|+++ ..+++. +..|+||||++|++|.+++... .+ ..++.||+.+|.|||++||+||||||.|||+
T Consensus 84 ~h~ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll 161 (389)
T 3gni_B 84 NHPNI--VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI 161 (389)
T ss_dssp CCTTB--CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCCCC--CcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 98753 334432 6689999999999998875321 11 2488899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhh-cccccccccccccc--CCCCcchheeccCchhhhhhhccCCcc
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKF-FRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~-f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
+.++.++|+|||.+............. .....+ .+...+++|+.+.. ..++.++||||||+++++++++..++.
T Consensus 162 ~~~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 238 (389)
T 3gni_B 162 SVDGKVYLSGLRSNLSMISHGQRQRVV---HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238 (389)
T ss_dssp CTTCCEEECCGGGCEECEETTEECSCB---CCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cCCCCEEEcccccceeecccccccccc---ccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 999999999999987653322111111 111111 22333345555544 578999999999999999999754321
Q ss_pred hh-------hh----------------------------------------------------hccCCCHHHHHHHHHHH
Q 012042 312 DK-------EL----------------------------------------------------AASGFTRKDQDVIQKFI 332 (472)
Q Consensus 312 ~~-------~~----------------------------------------------------~~~~~s~~~~~~l~k~l 332 (472)
.. .+ ....++..+.++|.+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L 318 (389)
T 3gni_B 239 DMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL 318 (389)
T ss_dssp TCCSTTHHHHC--------------------------------------------------------CCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHh
Confidence 10 00 12346788999999999
Q ss_pred hcCcccCCCCCCCCCC
Q 012042 333 GGSIEESGSDDEGSDD 348 (472)
Q Consensus 333 ~~~p~~R~s~~e~~~~ 348 (472)
..+|++|||+++....
T Consensus 319 ~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 319 QRNPDARPSASTLLNH 334 (389)
T ss_dssp CSCTTTSCCHHHHTTS
T ss_pred hcCcccCCCHHHHhcC
Confidence 9999999999988764
No 55
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96 E-value=6.4e-30 Score=265.47 Aligned_cols=221 Identities=15% Similarity=0.116 Sum_probs=164.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++.....-.. ....+.+|..+|.++ .|++
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~-------------------~~~~~~~E~~il~~~~~hp~ 114 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE-------------------DIDWVQTEKHVFEQASNHPF 114 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----------------------CCHHHHHHHHHHHHTTCTT
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHH-------------------HHHHHHHHHHHHHhcCCCCC
Confidence 67789999999999999998 46889999998632110000 001245788888887 4543
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
++.++.. +..||||||++|++|..++.. .. ...++.+|+.+|.|||++|||||||||.|||++.+|.+
T Consensus 115 --Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 115 --LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp --BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred --cCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCE
Confidence 2333332 568999999999999876532 12 22478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc---------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--------- 311 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--------- 311 (472)
+|+|||+|+....+.. ....+.++..+++|+.+....++.++|+||||+++|+++++..++.
T Consensus 193 kL~DFGla~~~~~~~~---------~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~ 263 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPGD---------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263 (396)
T ss_dssp EECCCTTCBCCCCTTC---------CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----
T ss_pred EEeecceeeecccCCC---------ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc
Confidence 9999999975322211 1223344555556776677889999999999999999999865431
Q ss_pred -------hhhh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 312 -------DKEL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 312 -------~~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
...+ .+..++.+++.+|.+||..+|.+|+++.
T Consensus 264 ~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 308 (396)
T 4dc2_A 264 QNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCH 308 (396)
T ss_dssp -CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCS
T ss_pred hhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCC
Confidence 0001 1346888999999999999999999985
No 56
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.96 E-value=4.1e-30 Score=248.85 Aligned_cols=222 Identities=13% Similarity=-0.016 Sum_probs=165.2
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.++..||||+++...... ..+.+|+.+|.++.|+++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~h~~i- 65 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-----------------------DEFFQEAQTMMKLSHPKL- 65 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH-----------------------HHHHHHHHHHHHCCCTTB-
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcH-----------------------HHHHHHHHHHHhCCCCCE-
Confidence 67789999999999999988888899999987443211 124579999999988653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+++... .. ..++.+++.+|.+||+.||+||||||.|||++.++.++
T Consensus 66 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~ 144 (268)
T 3sxs_A 66 -VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVK 144 (268)
T ss_dssp -CCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEE
T ss_pred -eeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEE
Confidence 444443 5679999999999998875321 11 24889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h----
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K---- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~---- 313 (472)
|+|||.+.....+..... .....+....+|+.+....++.++|+||||++++++++ +..+... .
T Consensus 145 l~Dfg~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 216 (268)
T 3sxs_A 145 VSDFGMTRYVLDDQYVSS--------VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216 (268)
T ss_dssp ECCTTCEEECCTTCEEEC--------CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred EccCccceecchhhhhcc--------cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH
Confidence 999999986543321110 00011112234554455678999999999999999998 5433210 0
Q ss_pred -------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...+..++..+.++|.+|+..+|++|||+.+..+
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (268)
T 3sxs_A 217 KVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLS 257 (268)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0113446888999999999999999999876543
No 57
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.96 E-value=1e-29 Score=255.36 Aligned_cols=217 Identities=14% Similarity=0.152 Sum_probs=153.1
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCCCCc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHGFPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~gi~v 173 (472)
++.||+|+||.||+|.+ .+|+.||||++.... .....+|+.+|..+. |++ +
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------------------~~~~~~e~~~l~~l~~h~n--i 68 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM-------------------------EANTQKEITALKLCEGHPN--I 68 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG-------------------------HHHHHHHHHHHHHTTTCTT--B
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh-------------------------hhhHHHHHHHHHHhcCCCC--e
Confidence 47899999999999999 479999999985221 112457999999997 554 3
Q ss_pred ceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC---cE
Q 012042 174 PNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE---KV 240 (472)
Q Consensus 174 P~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g---~v 240 (472)
+.+++. ...||||||++|++|.+.+... . ...++.+|+.+|.|||++||+||||||.|||++.++ .+
T Consensus 69 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 148 (325)
T 3kn6_A 69 VKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148 (325)
T ss_dssp CCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEE
T ss_pred eEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccE
Confidence 444442 5679999999999998876432 1 234889999999999999999999999999998665 79
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||++........ ......++...++|+.+....++.++||||||+++++++++..+....
T Consensus 149 kl~Dfg~a~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 219 (325)
T 3kn6_A 149 KIIDFGFARLKPPDNQ---------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT 219 (325)
T ss_dssp EECCCTTCEECCC-------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC
T ss_pred EEeccccceecCCCCC---------cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc
Confidence 9999999975432211 111222333445666656778999999999999999999975432110
Q ss_pred -------hhh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -------ELA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -------~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+. ...++.++.++|.+||..+|.+|||+++....
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 220 SAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 011 02578899999999999999999999988753
No 58
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=1.1e-29 Score=260.08 Aligned_cols=226 Identities=12% Similarity=0.062 Sum_probs=164.5
Q ss_pred eeeecceecccCceeEEEEEeC--------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE--------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM 163 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~--------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L 163 (472)
-|.+++.||+|+||.||+|.+. ++..||||+++...... ....+.+|+.+|
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l 140 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---------------------DLSDLVSEMEMM 140 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH---------------------HHHHHHHHHHHH
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH---------------------HHHHHHHHHHHH
Confidence 3678899999999999999862 35579999986432110 012356899999
Q ss_pred HHh-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC------------------h----HHHHHHHHHHHHH
Q 012042 164 KAL-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN------------------P----DSVFETIIGLVVR 216 (472)
Q Consensus 164 ~~L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~------------------~----~~i~~qIl~aL~~ 216 (472)
.++ .|++ ++.+++. +..|+||||++|++|.+++.... + ..++.||+.+|.|
T Consensus 141 ~~l~~hpn--Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 218 (370)
T 2psq_A 141 KMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 218 (370)
T ss_dssp HHSCCCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCC--EeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 999 6654 3444442 66899999999999988764211 1 2378899999999
Q ss_pred HHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheecc
Q 012042 217 LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 217 LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySl 296 (472)
||++||+||||||.|||++.++.++|+|||++.......... .......+..+++|+.+....++.++|||||
T Consensus 219 LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~Dvwsl 291 (370)
T 2psq_A 219 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291 (370)
T ss_dssp HHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTC-------TTTTTTSCGGGCCHHHHHTCCCCHHHHHHHH
T ss_pred HHhCCeeccccchhhEEECCCCCEEEccccCCcccCccccee-------cccCCCcccceECHhHhcCCCCCcHHHHHHH
Confidence 999999999999999999999999999999998654321100 0011111222345555567789999999999
Q ss_pred Cchhhhhhh-ccCCcch-------hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 297 SRLSFASIS-KTAGFLD-------KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 297 G~~~f~~~t-~~~~~l~-------~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|+++|++++ +..+... .. ..+..++.++.++|.+|+..+|++||+..+..+
T Consensus 292 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 292 GVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp HHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999998 5432211 00 123467889999999999999999999876543
No 59
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=1e-29 Score=255.33 Aligned_cols=223 Identities=15% Similarity=0.181 Sum_probs=159.8
Q ss_pred eeeecceecccCceeEEEEEe----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVAR----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++.....- .. .....+.+|+.+|.++.
T Consensus 18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~-----------------~~~~~~~~E~~~l~~l~ 79 (327)
T 3a62_A 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NA-----------------KDTAHTKAERNILEEVK 79 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------------------------HHHHHHHCC
T ss_pred HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-hh-----------------hHHHHHHHHHHHHHhCC
Confidence 367889999999999999987 368999999986431100 00 00113457999999998
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.++.. +..||||||++|++|..++... . ...++.+|+.+|.|||++||+||||||.|||++.+
T Consensus 80 hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 80 HPFI--VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp CTTB--CCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTT
T ss_pred CCCc--cceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCC
Confidence 8653 444432 6789999999999998875321 1 22478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+.++|+|||++........ ....+.+...+++|+.+....++.++|+||||+++|+++++..++...
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 228 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDGT---------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK 228 (327)
T ss_dssp SCEEECCCSCC-------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred CcEEEEeCCcccccccCCc---------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH
Confidence 9999999999875432211 111233444445666656778899999999999999999986543110
Q ss_pred ---hh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 ---EL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 ---~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.+ .+..++.++.++|.+||..+|++||++.
T Consensus 229 ~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~ 267 (327)
T 3a62_A 229 TIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAG 267 (327)
T ss_dssp HHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCC
Confidence 01 1346788999999999999999999875
No 60
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.96 E-value=7.7e-30 Score=252.20 Aligned_cols=224 Identities=16% Similarity=0.137 Sum_probs=164.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|.++.|+++
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 64 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPV--------------------IKKIALREIRMLKQLKHPNL 64 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchH--------------------HHHHHHHHHHHHHhCCCCCc
Confidence 67789999999999999999 4699999998864322111 11235679999999998753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|..+.... . ...++.+++.+|.+||++||+||||||.|||++.++.++
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 142 (311)
T 4agu_A 65 --VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIK 142 (311)
T ss_dssp --CCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred --cchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEE
Confidence 444443 5679999999999988775422 2 234788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||.+.....+... .....++....+|+.+. ...++.++|+||||+++++++++..+....
T Consensus 143 l~Dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 213 (311)
T 4agu_A 143 LCDFGFARLLTGPSDY---------YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY 213 (311)
T ss_dssp ECCCTTCEECC---------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EeeCCCchhccCcccc---------cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999865433211 11112233334555443 367899999999999999999975432100
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+.++|.+|+..+|++|||+++...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 214 LIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred HHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0011467888999999999999999999988765
No 61
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.96 E-value=9.9e-30 Score=257.14 Aligned_cols=219 Identities=16% Similarity=0.096 Sum_probs=162.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++..... ...+.+|+.+|.++.+..+
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~e~~~l~~l~~~~~ 93 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKY-----------------------TRSAKIEADILKKIQNDDI 93 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHH-----------------------HHHHHHHHHHHHHTCCCST
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhh-----------------------hhhhHHHHHHHHHhcccCC
Confidence 77889999999999999999 57999999998632110 1134569999999985444
Q ss_pred Ccceeeec-------CCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVDC-------NRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~~-------~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
.+|+++.+ +..+|||||+ |++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.
T Consensus 94 ~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 94 NNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172 (360)
T ss_dssp TGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred CCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcc
Confidence 45554432 5689999999 88888875422 1 1247899999999999999999999999999975
Q ss_pred -------------------------CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcch
Q 012042 237 -------------------------DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDI 291 (472)
Q Consensus 237 -------------------------~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~s 291 (472)
++.++|+|||.|........ .+.++..+.+|+.+....++.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------------~~~gt~~y~aPE~~~~~~~~~~~ 240 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG------------SIINTRQYRAPEVILNLGWDVSS 240 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC------------SCCSCGGGCCHHHHTTCCCCTTH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc------------CccCcccccCcHHHcCCCCCCcc
Confidence 78899999999986432211 12333344566666678899999
Q ss_pred heeccCchhhhhhhccCCcchh---h----h-------------------------------------------------
Q 012042 292 DTDEGSRLSFASISKTAGFLDK---E----L------------------------------------------------- 315 (472)
Q Consensus 292 DiySlG~~~f~~~t~~~~~l~~---~----~------------------------------------------------- 315 (472)
||||||+++|+++++..++... . +
T Consensus 241 DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 320 (360)
T 3llt_A 241 DMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKC 320 (360)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhc
Confidence 9999999999999976432100 0 0
Q ss_pred ---hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 316 ---AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 316 ---~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.....+..+.++|.+||+.+|++|||+++..+
T Consensus 321 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 321 LPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp CCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00112356679999999999999999987654
No 62
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.96 E-value=1.2e-29 Score=247.99 Aligned_cols=228 Identities=13% Similarity=0.100 Sum_probs=164.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+....... ..+.+|+.++..+.|+.
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~e~~~l~~l~~~~ 65 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------------------------PQLHIESKIYKMMQGGV 65 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------------------------CCHHHHHHHHHHHTTST
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------------------------hHHHHHHHHHHHhcCCC
Confidence 367889999999999999998 57999999986532110 01346899999998764
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEE---cC
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI---DD 236 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl---~~ 236 (472)
+ ++.+.. ....++||||+ |++|.+++.. ..+ ..++.+|+.+|.|||++||+||||||.|||+ +.
T Consensus 66 ~-i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~ 143 (296)
T 4hgt_A 66 G-IPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 143 (296)
T ss_dssp T-CCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGG
T ss_pred C-CCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCC
Confidence 2 233222 25579999999 8899887642 111 2488999999999999999999999999999 78
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
++.++|+|||++............ .........+.....+|+.+....++.++||||||+++++++++..+...
T Consensus 144 ~~~~kL~Dfg~a~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 221 (296)
T 4hgt_A 144 GNLVYIIDFGLAKKYRDARTHQHI--PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA 221 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBC--CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS
T ss_pred CCeEEEecCccceeccCcccCccC--CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh
Confidence 889999999999876433221100 00011122333333456655677899999999999999999997543211
Q ss_pred -----------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -----------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -----------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......+++.++.++|.+|++.+|++||+.++-.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 222 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp SSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 00112678999999999999999999999877644
No 63
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.96 E-value=1e-29 Score=255.45 Aligned_cols=218 Identities=15% Similarity=0.154 Sum_probs=164.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++... ....+ ....+.+|..+|..+.|+++
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~-----------------~~~~~~~E~~~l~~l~hp~I 68 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI--VVRLK-----------------QVEHTNDERLMLSIVTHPFI 68 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHHTT-----------------CHHHHHHHHHHHHSCCBTTB
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--hhhhh-----------------HHHHHHHHHHHHhhCCCCCC
Confidence 67789999999999999998 479999999986321 00000 01234579999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+++++. ...|+||||++|++|..++... .+ ..++.+|+.+|.|||++||+||||||.|||++.+|.++
T Consensus 69 --v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k 146 (318)
T 1fot_A 69 --IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK 146 (318)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEE
T ss_pred --ceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEE
Confidence 444432 5689999999999998876432 12 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||++....... ..+.++..+++|+.+....++.++|+||||+++++++++..++... .
T Consensus 147 L~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~ 214 (318)
T 1fot_A 147 ITDFGFAKYVPDVT------------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK 214 (318)
T ss_dssp ECCCSSCEECSSCB------------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred EeecCcceecCCcc------------ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99999998653211 1223444445666666778999999999999999999986543210 1
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
+ .+..++.++.++|.+||..+|.+|++..
T Consensus 215 i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~ 249 (318)
T 1fot_A 215 ILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNL 249 (318)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSS
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCc
Confidence 1 1356889999999999999999999643
No 64
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=262.11 Aligned_cols=220 Identities=15% Similarity=0.134 Sum_probs=164.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++.... ... . .....+.+|+.+|..+.|+++
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~--~~~---------~--------~~~~~~~~E~~il~~l~hp~I 77 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK--CVE---------R--------NEVRNVFKELQIMQGLEHPFL 77 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHH--HHH---------T--------TCHHHHHHHHHHHHTCCCTTB
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhh--ccc---------H--------HHHHHHHHHHHHHHhCCCCCC
Confidence 67789999999999999998 469999999985221 000 0 011245679999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++.. ...|+||||+.|++|..++... .+ ..++.+|+.+|.|||++||+||||||.|||++.+|.++
T Consensus 78 --v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vk 155 (384)
T 4fr4_A 78 --VNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVH 155 (384)
T ss_dssp --CCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred --CcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEE
Confidence 333332 6689999999999998876432 12 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc---cCCCCcchheeccCchhhhhhhccCCcch------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---DGDDGSDIDTDEGSRLSFASISKTAGFLD------ 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---~~~~~~~sDiySlG~~~f~~~t~~~~~l~------ 312 (472)
|+|||+|....... ....+.++..+++|+.+. ...++.++|+||||+++|+++++..++..
T Consensus 156 L~DFG~a~~~~~~~----------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~ 225 (384)
T 4fr4_A 156 ITDFNIAAMLPRET----------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225 (384)
T ss_dssp ECCCTTCEECCTTC----------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH
T ss_pred EeccceeeeccCCC----------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH
Confidence 99999998653221 112233444445666543 34589999999999999999998644310
Q ss_pred h----------hhhccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 313 K----------ELAASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 313 ~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
. ...+..++..+..+|.+||..+|.+||++-
T Consensus 226 ~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~ 266 (384)
T 4fr4_A 226 KEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQL 266 (384)
T ss_dssp HHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSH
T ss_pred HHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccH
Confidence 0 011356889999999999999999999853
No 65
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.96 E-value=4.8e-30 Score=250.32 Aligned_cols=221 Identities=12% Similarity=-0.012 Sum_probs=161.9
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.++..||||+++...... ..+.+|+.+|.++.|+++
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~h~~i- 81 (283)
T 3gen_A 26 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-----------------------DEFIEEAKVMMNLSHEKL- 81 (283)
T ss_dssp EEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCH-----------------------HHHHHHHHHHHTCCCTTB-
T ss_pred HHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH-----------------------HHHHHHHHHHhcCCCCCE-
Confidence 67789999999999999998888899999987443211 124579999999988653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhcc---CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+++.. .. ...++.+++.+|.+||++||+||||||.|||++.++.++
T Consensus 82 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~k 160 (283)
T 3gen_A 82 -VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 160 (283)
T ss_dssp -CCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEE
T ss_pred -eeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEE
Confidence 444443 567999999999999887642 11 124889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD-------K 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~-------~ 313 (472)
|+|||.+.....+.... ...........+|+.+....++.++|+||||++++++++ +..+... .
T Consensus 161 l~Dfg~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~ 232 (283)
T 3gen_A 161 VSDFGLSRYVLDDEYTS--------SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232 (283)
T ss_dssp ECSTTGGGGBCCHHHHS--------TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred Ecccccccccccccccc--------ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH
Confidence 99999997553321110 000011112235555556789999999999999999998 6433210 0
Q ss_pred -------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.++|.+|+..+|.+|||.++..
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll 272 (283)
T 3gen_A 233 HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272 (283)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred HHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 012345788899999999999999999987653
No 66
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.96 E-value=1.5e-29 Score=246.30 Aligned_cols=222 Identities=14% Similarity=0.044 Sum_probs=165.5
Q ss_pred eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
-|.+.+.||+|+||.||+|.+.++..||||+++...... ..+.+|+.+|.++.|+++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~h~~i 70 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-----------------------DAFLAEANLMKQLQHQRL 70 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH-----------------------HHHHHHHHHHHHCCCTTB
T ss_pred hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH-----------------------HHHHHHHHHHHhCCCcCc
Confidence 367789999999999999998878899999986432111 134579999999988753
Q ss_pred Ccceeee---cCCceeEEeecCCCChhhhhccC----C-h---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ----N-P---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~----~-~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++ .+..++||||++|++|.+++... . . ..++.+++.+|.+||++||+||||||.|||++.++.+
T Consensus 71 --~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~ 148 (279)
T 1qpc_A 71 --VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 148 (279)
T ss_dssp --CCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred --ceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCE
Confidence 34443 36789999999999999876421 1 1 2478999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h---
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K--- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~--- 313 (472)
+|+|||.+.......... ...........+|+......++.++|+||||++++++++ +..+... .
T Consensus 149 kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 220 (279)
T 1qpc_A 149 KIADFGLARLIEDNEYTA--------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220 (279)
T ss_dssp EECCCTTCEECSSSCEEC--------CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred EECCCcccccccCccccc--------ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH
Confidence 999999998664321110 000111112334554455778999999999999999998 5432211 0
Q ss_pred --------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+..+|.+|+..+|++|||.++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 261 (279)
T 1qpc_A 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLR 261 (279)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHH
Confidence 012356788999999999999999999987643
No 67
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.96 E-value=7e-30 Score=255.85 Aligned_cols=225 Identities=13% Similarity=0.140 Sum_probs=164.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++...... ..+.+|+.+|.+| .|++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~E~~~l~~l~~h~~ 66 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA------------------------PQLHLEYRFYKQLGSGDG 66 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS------------------------CCHHHHHHHHHHHCSCTT
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch------------------------HHHHHHHHHHHHhhCCCC
Confidence 67789999999999999998 57999999998633210 0134799999999 6655
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc---CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +.++.+ ...++||||+ |++|.+++.. .. ...++.+|+.+|.|||+.||+||||||.|||++.++.
T Consensus 67 i--~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 143 (330)
T 2izr_A 67 I--PQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN 143 (330)
T ss_dssp S--CCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG
T ss_pred C--CEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC
Confidence 3 454443 5679999999 8999887642 11 1248899999999999999999999999999998776
Q ss_pred -----EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 240 -----VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 240 -----vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
++|+|||++.....+...... .......+.++..+++|+.+.+..++.++|+||||+++|+++++..+...
T Consensus 144 ~~~~~~kl~DFg~a~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~ 221 (330)
T 2izr_A 144 KTQQVIHIIDFALAKEYIDPETKKHI--PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK 221 (330)
T ss_dssp TCTTSEEECCCTTCEESBCTTTCCBC--CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCCceEEEEEcccceeeecCCCCccc--cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence 999999999876543321110 00011223344444566666677899999999999999999997543211
Q ss_pred --------hh-----------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --------KE-----------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --------~~-----------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. ....+++ ++.++|.+|+..+|.+||+.++..+
T Consensus 222 ~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 222 ADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp CSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred cccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 00 0112344 8999999999999999999876544
No 68
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=6.3e-30 Score=256.69 Aligned_cols=227 Identities=11% Similarity=0.051 Sum_probs=164.7
Q ss_pred eeeecceecccCceeEEEEEeC-C---CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-D---GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~---g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+.+.||+|+||.||+|.+. + +..||||+++...... .+..+.+|+.+|.+|.
T Consensus 50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~ 108 (325)
T 3kul_A 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER---------------------QRRDFLSEASIMGQFD 108 (325)
T ss_dssp GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHH---------------------HHHHHHHHHHHHTTCC
T ss_pred HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHH---------------------HHHHHHHHHHHHHhCC
Confidence 3778899999999999999983 3 4469999986432111 1123567999999998
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
|+++ +.++++ +..+|||||++|++|..++... . ...++.+|+.+|.|||+.||+||||||.|||++.
T Consensus 109 h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~ 186 (325)
T 3kul_A 109 HPNI--IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS 186 (325)
T ss_dssp CTTB--CCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred CCCC--CcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECC
Confidence 8653 444443 5679999999999999876322 1 1247899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD--- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~--- 312 (472)
++.++|+|||++............ ......+..+++|+.+....++.++||||||++++++++ +..+...
T Consensus 187 ~~~~kl~Dfg~a~~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~ 260 (325)
T 3kul_A 187 NLVCKVSDFGLSRVLEDDPDAAYT------TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260 (325)
T ss_dssp TCCEEECCCSSCEECC----CCEE------CC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH
T ss_pred CCCEEECCCCcccccccCccceee------ccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH
Confidence 999999999999866432111100 000011112345555556788999999999999999998 5433211
Q ss_pred h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. . .....++..+.++|.+|+..+|++|||.++-.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 261 RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0 0 113468899999999999999999999877544
No 69
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=8.6e-30 Score=258.84 Aligned_cols=221 Identities=16% Similarity=0.125 Sum_probs=164.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.....-. .....+.+|..+|.++ .|++
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~~~~hp~ 71 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-------------------EDIDWVQTEKHVFEQASNHPF 71 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-------------------HHHHHHHHHHHHHHHTTTCTT
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-------------------HHHHHHHHHHHHHHhcCCCCc
Confidence 67789999999999999998 4689999999863211000 0112355799999887 5544
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc--CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +.++.. +..|+||||++|++|..++.. ..+ ..++.+|+.+|.|||++||+||||||.|||++.+|.+
T Consensus 72 i--v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~ 149 (345)
T 3a8x_A 72 L--VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 149 (345)
T ss_dssp B--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred c--CeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCE
Confidence 2 333332 668999999999999886532 122 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------- 312 (472)
+|+|||+|+....+.. ....+.++..+++|+.+....++.++|+||||+++|+++++..++..
T Consensus 150 kL~DFG~a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 220 (345)
T 3a8x_A 150 KLTDYGMCKEGLRPGD---------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220 (345)
T ss_dssp EECCGGGCBCSCCTTC---------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-----
T ss_pred EEEeccccccccCCCC---------cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc
Confidence 9999999975322211 11223344445566666677889999999999999999997644310
Q ss_pred --------hhh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 313 --------KEL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 313 --------~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
..+ .+..++.++.++|.+||..+|.+||++.
T Consensus 221 ~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 265 (345)
T 3a8x_A 221 QNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCH 265 (345)
T ss_dssp --CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCC
T ss_pred cccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCC
Confidence 001 1346888999999999999999999985
No 70
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=249.87 Aligned_cols=225 Identities=13% Similarity=0.141 Sum_probs=162.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh---h
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE---D 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~---~ 168 (472)
|++.+.||+|+||.||+|.+ .+|+.||||+++......... . ......+|+.++.++. |
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----------~------~~~~~~~e~~~l~~l~~~~h 73 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGG-----------G------LPISTVREVALLRRLEAFEH 73 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSS-----------C------CCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccc-----------c------cchhHHHHHHHHHHHhhcCC
Confidence 67889999999999999998 579999999986322110000 0 0012346777777776 5
Q ss_pred CCCCcceeeec----C-----CceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 169 HGFPVPNAVDC----N-----RHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 169 ~gi~vP~~i~~----~-----~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
++ ++.+++. . ..++||||++| +|.+++... .+ ..++.||+.+|.|||++||+||||||.|
T Consensus 74 ~n--iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N 150 (308)
T 3g33_A 74 PN--VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 150 (308)
T ss_dssp TT--BCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred CC--eEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence 54 3444432 1 36899999986 777765322 11 2488999999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
||++.++.++|+|||++........ ...+.++..+++|+.+....++.++||||||+++++++++...+.
T Consensus 151 il~~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 220 (308)
T 3g33_A 151 ILVTSGGTVKLADFGLARIYSYQMA----------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 220 (308)
T ss_dssp EEECTTSCEEECSCSCTTTSTTCCC----------SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCC
T ss_pred EEEcCCCCEEEeeCccccccCCCcc----------cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999975432211 122334444556666667889999999999999999998764321
Q ss_pred hh-------h---------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 DK-------E---------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ~~-------~---------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. . .....++..+.++|.+||..+|++|||+.+...
T Consensus 221 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 221 GNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0 011357788899999999999999999988765
No 71
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.6e-30 Score=254.55 Aligned_cols=225 Identities=17% Similarity=0.219 Sum_probs=163.2
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.+.||+|+||.||+|.+. +|+.||||+++... ... ....+.+|+.+|.++.|++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~-------------------~~~~~~~E~~~l~~l~h~~ 68 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLR-------------------PVDVQMREFEVLKKLNHKN 68 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG--GGS-------------------CHHHHHHHHHHHHHCCCTT
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc--ccc-------------------hHHHHHHHHHHHHhcCCCC
Confidence 5788999999999999999994 69999999986321 100 0113457999999998865
Q ss_pred CCcceeeec------CCceeEEeecCCCChhhhhccC-----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEE-
Q 012042 171 FPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ-----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI- 234 (472)
Q Consensus 171 i~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~-----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl- 234 (472)
+ +.+++. ...+|||||++|++|.+++... .+ ..++.||+.+|.|||+.||+||||||.|||+
T Consensus 69 i--v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 146 (319)
T 4euu_A 69 I--VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRV 146 (319)
T ss_dssp B--CCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred c--ceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEe
Confidence 3 444432 2568999999999998876431 12 2488999999999999999999999999999
Q ss_pred ---cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc--------cCCCCcchheeccCchhhhh
Q 012042 235 ---DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT--------DGDDGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 235 ---~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~--------~~~~~~~sDiySlG~~~f~~ 303 (472)
+.++.++|+|||++......... ....+...+.+|+.+. ...++.++||||||+++|++
T Consensus 147 ~~~~~~~~~kL~Dfg~a~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el 216 (319)
T 4euu_A 147 IGEDGQSVYKLTDFGAARELEDDEQF----------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216 (319)
T ss_dssp ECTTSCEEEEECCCTTCEECCTTCCB----------CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEccCCCceecCCCCce----------eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHH
Confidence 66777999999999866432211 1122333333444332 47889999999999999999
Q ss_pred hhccCCcch-------h----hhh-------------------------------ccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 304 ISKTAGFLD-------K----ELA-------------------------------ASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 304 ~t~~~~~l~-------~----~~~-------------------------------~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
+++..++.. . .+. ...++..+..+|.+||+.+|++|||
T Consensus 217 ~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s 296 (319)
T 4euu_A 217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG 296 (319)
T ss_dssp HHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC
T ss_pred HhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhcc
Confidence 997543210 0 000 0123345678999999999999999
Q ss_pred CCCCCCCC
Q 012042 342 DDEGSDDG 349 (472)
Q Consensus 342 ~~e~~~~~ 349 (472)
+++..+.-
T Consensus 297 ~~ell~h~ 304 (319)
T 4euu_A 297 FDQFFAET 304 (319)
T ss_dssp HHHHHHHH
T ss_pred HHHhhhcc
Confidence 99887644
No 72
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=8.3e-30 Score=255.59 Aligned_cols=231 Identities=13% Similarity=0.184 Sum_probs=164.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++.... .... .......+.+|+.+|.++.|+++
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~---------------~~~~~~~~~~E~~~l~~l~hpni 90 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNK--IRQI---------------NPKDVERIKTEVRLMKKLHHPNI 90 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHC------------------CHHHHHHHHHHHHHHCCCTTB
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhh--hccc---------------CHHHHHHHHHHHHHHHhCCCCCc
Confidence 78889999999999999998 578999999986321 0000 00012245689999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc----------------------------------------C------
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL----------------------------------------Q------ 201 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~----------------------------------------~------ 201 (472)
+.+++. +..+|||||++|++|.+++.. .
T Consensus 91 --v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (345)
T 3hko_A 91 --ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREK 168 (345)
T ss_dssp --CCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHH
T ss_pred --ceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHH
Confidence 444443 567999999999999887631 0
Q ss_pred ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC--cEEEEeCCCceecCcccchhhhccccchhhhhccccccccc
Q 012042 202 NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE--KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNF 279 (472)
Q Consensus 202 ~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g--~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~ 279 (472)
....++.+|+.+|.|||+.||+||||||.|||++.++ .++|+|||.+........... .......+...+.+|
T Consensus 169 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY-----YGMTTKAGTPYFVAP 243 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-------------CCCGGGCCH
T ss_pred HHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcccc-----ccccccCCCccccCc
Confidence 0123788999999999999999999999999998766 799999999986543221111 111122333334455
Q ss_pred ccccc--CCCCcchheeccCchhhhhhhccCCcch-------hhh----------hccCCCHHHHHHHHHHHhcCcccCC
Q 012042 280 QETTD--GDDGSDIDTDEGSRLSFASISKTAGFLD-------KEL----------AASGFTRKDQDVIQKFIGGSIEESG 340 (472)
Q Consensus 280 ~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~----------~~~~~s~~~~~~l~k~l~~~p~~R~ 340 (472)
+.+.. ..++.++||||||+++++++++..+... ..+ ....++..+.++|.+|+..+|.+||
T Consensus 244 E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred hhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCC
Confidence 54432 6789999999999999999997654211 000 1123788999999999999999999
Q ss_pred CCCCCCC
Q 012042 341 SDDEGSD 347 (472)
Q Consensus 341 s~~e~~~ 347 (472)
++.+..+
T Consensus 324 s~~~~l~ 330 (345)
T 3hko_A 324 DAMRALQ 330 (345)
T ss_dssp CHHHHHH
T ss_pred CHHHHhc
Confidence 9876543
No 73
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.96 E-value=8.2e-30 Score=247.72 Aligned_cols=217 Identities=17% Similarity=0.194 Sum_probs=165.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++..... +.+|+.+|.++.|+++
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~e~~~l~~l~h~~i 66 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK--------------------------AEREVKALAKLDHVNI 66 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGG--------------------------GHHHHHHHHHCCCTTB
T ss_pred cceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHH--------------------------HHHHHHHHHhCCCCCE
Confidence 677899999999999999994 7999999998744211 2369999999988763
Q ss_pred Ccceeeec--------------------CCceeEEeecCCCChhhhhcc----CCh----HHHHHHHHHHHHHHHHCCce
Q 012042 172 PVPNAVDC--------------------NRHCVIMSLVQGYPLVQVNQL----QNP----DSVFETIIGLVVRLAEHGLI 223 (472)
Q Consensus 172 ~vP~~i~~--------------------~~~~LVMEyi~G~~L~~l~~~----~~~----~~i~~qIl~aL~~LH~~GII 223 (472)
+.+++. ...++||||++|++|.+++.. ..+ ..++.+|+.+|.+||++||+
T Consensus 67 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 144 (284)
T 2a19_B 67 --VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLI 144 (284)
T ss_dssp --CCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred --EEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 332221 236899999999999987632 111 24789999999999999999
Q ss_pred eccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhh
Q 012042 224 HCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 224 HrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~ 303 (472)
||||||.|||++.++.++|+|||.+......... ....+.....+|+.+....++.++|+||||++++++
T Consensus 145 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 214 (284)
T 2a19_B 145 NRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR----------TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214 (284)
T ss_dssp CSCCSGGGEEEEETTEEEECCCTTCEESSCCSCC----------CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHH
T ss_pred eccCCHHHEEEcCCCCEEECcchhheeccccccc----------cccCCcccccChhhhccCCCcchhhhHHHHHHHHHH
Confidence 9999999999999999999999999866432110 111223333455555667789999999999999999
Q ss_pred hhccCCcch---------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 304 ISKTAGFLD---------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 304 ~t~~~~~l~---------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+++...... .......++..+.++|.+|+..+|++|||+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 267 (284)
T 2a19_B 215 LHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267 (284)
T ss_dssp HSCCSSHHHHHHHHHHHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhcCCcchhHHHHHHHhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 987543221 11123568899999999999999999999876543
No 74
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.96 E-value=1e-29 Score=258.95 Aligned_cols=218 Identities=16% Similarity=0.124 Sum_probs=165.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++... ..... ....+.+|+.+|.++.|+++
T Consensus 43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~-----------------~~~~~~~E~~~l~~l~hp~i 103 (350)
T 1rdq_E 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLK-----------------QIEHTLNEKRILQAVNFPFL 103 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHHTT-----------------CHHHHHHHHHHHTTCCCTTB
T ss_pred CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH--hccHH-----------------HHHHHHHHHHHHHhCCCCCC
Confidence 56789999999999999998 479999999986321 00000 01235579999999987653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++. ....|+||||++|++|..++.. .. ...++.+|+.+|.|||++||+||||||.|||++.+|.++
T Consensus 104 --v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k 181 (350)
T 1rdq_E 104 --VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181 (350)
T ss_dssp --CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred --CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEE
Confidence 33333 2568999999999999887642 11 224789999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||++....... ..+.++..+++|+.+....++.++|+||||+++|+++++..++... .
T Consensus 182 L~DFg~a~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~ 249 (350)
T 1rdq_E 182 VTDFGFAKRVKGRT------------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249 (350)
T ss_dssp ECCCTTCEECSSCB------------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EcccccceeccCCc------------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHH
Confidence 99999998653221 1223444445666666778999999999999999999986543210 1
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
+ .+..++..+..+|.+||..+|.+||++-
T Consensus 250 i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~ 284 (350)
T 1rdq_E 250 IVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNL 284 (350)
T ss_dssp HHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSS
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCc
Confidence 1 1356899999999999999999999853
No 75
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=251.29 Aligned_cols=221 Identities=14% Similarity=0.100 Sum_probs=156.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|++.+.||+|+||.||+|.+. +|+.||||++......... .....+|+..+.++ .|++
T Consensus 59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~e~~~~~~~~~h~~ 118 (311)
T 3p1a_A 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD--------------------RARKLAEVGSHEKVGQHPC 118 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH--------------------HHHHHHHHHHHHHHCCCTT
T ss_pred eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH--------------------HHHHHHHHHHHHHhcCCCc
Confidence 677899999999999999995 7999999987543221111 11223466666655 4543
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc---CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
++.++++ +..+|||||+. ++|...+.. .. ...++.+|+.+|.|||+.||+||||||.|||++.++.
T Consensus 119 --iv~l~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~ 195 (311)
T 3p1a_A 119 --CVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR 195 (311)
T ss_dssp --BCCEEEEEEETTEEEEEEECCC-CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGC
T ss_pred --EEEEEEEEEeCCEEEEEEeccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCC
Confidence 3344432 56899999995 466654321 11 2248899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h---
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K--- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~--- 313 (472)
++|+|||++......... .......+|.++++..+.++.++||||||+++++++++...+.. .
T Consensus 196 ~kl~DFG~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~ 264 (311)
T 3p1a_A 196 CKLGDFGLLVELGTAGAG-----------EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264 (311)
T ss_dssp EEECCCTTCEECC-----------------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHH
T ss_pred EEEccceeeeecccCCCC-----------cccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 999999999865432111 11112234444444456899999999999999999997432211 0
Q ss_pred ------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++.++.++|.+|+..+|++|||+++...
T Consensus 265 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 265 RQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1123568899999999999999999999876543
No 76
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=1.7e-29 Score=253.17 Aligned_cols=225 Identities=15% Similarity=0.108 Sum_probs=163.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||++......-. ....+.+|+.+|.++.|++
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~ 85 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM--------------------VKKIAMREIKLLKQLRHEN 85 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHH--------------------HHHHHHHHHHHHHHCCCTT
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchH--------------------HHHHHHHHHHHHhhCCCCC
Confidence 477889999999999999999 4699999998864321111 1123567999999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +.+++. +..++||||++|++|..+.... . ...++.+|+.+|.+||+.||+||||||.|||++.++.+
T Consensus 86 i--v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~ 163 (331)
T 4aaa_A 86 L--VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVV 163 (331)
T ss_dssp B--CCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCE
T ss_pred E--eeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcE
Confidence 3 444443 5679999999999888764322 1 23488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||.+.....+... .....+.....+|+.+.. ..++.++||||||+++++++++...+...
T Consensus 164 kl~Dfg~~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 234 (331)
T 4aaa_A 164 KLCDFGFARTLAAPGEV---------YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234 (331)
T ss_dssp EECCCTTC---------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEEeCCCceeecCCccc---------cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999765432211 111223333345554433 37899999999999999999975432100
Q ss_pred --------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+.++|.+|+..+|++|||+++..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 235 YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0001357889999999999999999999998776
No 77
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.96 E-value=1.7e-29 Score=258.06 Aligned_cols=229 Identities=14% Similarity=0.157 Sum_probs=166.2
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.++||+|+||.||+|.+. +|+.||||+++........ .........+.+|+.+|.++ .|++
T Consensus 96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~~hp~ 161 (365)
T 2y7j_A 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSP--------------EQLEEVREATRRETHILRQVAGHPH 161 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCH--------------HHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCH--------------HHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 778899999999999999984 7999999999765321110 00111223567899999999 5765
Q ss_pred CCcceeee--cCCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 171 FPVPNAVD--CNRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 171 i~vP~~i~--~~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+..+..+. .+..|+||||++|++|.+++.. .. ...++.+|+.+|.|||+.||+||||||.|||++.++.++|
T Consensus 162 iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp BCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred EeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence 43332221 2668999999999999887532 11 2358899999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccc------cCCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT------DGDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~------~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
+|||++........ .....+...+++|+.+. ...++.++||||||+++|+++++..+....
T Consensus 242 ~DfG~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 311 (365)
T 2y7j_A 242 SDFGFSCHLEPGEK----------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311 (365)
T ss_dssp CCCTTCEECCTTCC----------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EecCcccccCCCcc----------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH
Confidence 99999986643211 11123333334454432 235888999999999999999986543110
Q ss_pred ----hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ----EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ----~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ ....++..+.++|.+||..+|++|||+++.
T Consensus 312 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 312 LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 00 113577889999999999999999998764
No 78
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.96 E-value=6.9e-30 Score=259.34 Aligned_cols=219 Identities=16% Similarity=0.183 Sum_probs=156.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.+|+.+|.+|.|+++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------------~~~~~~E~~~l~~l~h~ni 110 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD------------------------KKIVRTEIGVLLRLSHPNI 110 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------------------------CHHHHHCCCTTB
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh------------------------HHHHHHHHHHHHhCCCCCC
Confidence 778899999999999999994 689999999863210 0124579999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC---CC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD---DE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~---~g 238 (472)
+.+++. ...++||||++|++|.+.+... . ...++.+|+.+|.|||+.||+||||||.|||++. ++
T Consensus 111 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~ 188 (349)
T 2w4o_A 111 --IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA 188 (349)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTC
T ss_pred --cceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCC
Confidence 444442 5679999999999998876432 1 2348899999999999999999999999999975 78
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||++........ .....+...+.+|+.+.+..++.++||||||+++++++++..+....
T Consensus 189 ~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 258 (349)
T 2w4o_A 189 PLKIADFGLSKIVEHQVL----------MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF 258 (349)
T ss_dssp CEEECCCC--------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH
T ss_pred CEEEccCccccccCcccc----------cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH
Confidence 899999999975432211 11122333344555556678999999999999999999976433110
Q ss_pred ---hhh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ---ELA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ---~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+. ...++.++.++|.+||..+|++|||+.+..+
T Consensus 259 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 259 MFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 1357888999999999999999999977655
No 79
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=255.69 Aligned_cols=229 Identities=17% Similarity=0.176 Sum_probs=163.0
Q ss_pred CceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 90 GVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
+-.|.+.+.||+|+||.||+|.+.+++.||||++......... ...+.+|+.+|.+|.++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~~~ 67 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT--------------------LDSYRNEIAYLNKLQQH 67 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHH--------------------HHHHHHHHHHHHHHTTT
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHH--------------------HHHHHHHHHHHHhhhhc
Confidence 4568899999999999999999988999999998754322111 12356899999999874
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
.-.++.++++ ...+||||| .+++|.+++... . ...++.+|+.+|.|||++||+||||||.|||++ ++.
T Consensus 68 ~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~ 145 (343)
T 3dbq_A 68 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGM 145 (343)
T ss_dssp CTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTE
T ss_pred CCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCc
Confidence 3334555543 567999994 567888765322 1 235889999999999999999999999999997 678
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-----------CCCCcchheeccCchhhhhhhccC
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-----------GDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-----------~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
++|+|||++.......... ......++..+++|+.+.. ..++.++||||||+++++++++..
T Consensus 146 ~kl~DFG~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~ 218 (343)
T 3dbq_A 146 LKLIDFGIANQMQPDTTSV-------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 218 (343)
T ss_dssp EEECCCSSSCCC-------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEeecccccccCcccccc-------cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999997653221110 0112233334445554322 678999999999999999999865
Q ss_pred Ccch---h-----h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 309 GFLD---K-----E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 309 ~~l~---~-----~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++.. . . ......+..+.++|.+|+..+|.+|||+++...
T Consensus 219 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 219 PFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp TTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 4311 0 0 012345678899999999999999999988765
No 80
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.96 E-value=1.8e-29 Score=263.59 Aligned_cols=232 Identities=10% Similarity=0.115 Sum_probs=164.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++....... ....+.+|+.+|.+|.|+++
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~nI 87 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--------------------DCKRILREITILNRLKSDYI 87 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChH--------------------HHHHHHHHHHHHHHcCCCCc
Confidence 77889999999999999998 5689999999863211111 11245689999999988653
Q ss_pred Ccceeeec---------CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
..+++. ...||||||++| +|.+++... . ...++.||+.+|.|||++||+||||||.||||+.
T Consensus 88 --v~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~ 164 (432)
T 3n9x_A 88 --IRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ 164 (432)
T ss_dssp --CCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred --ceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECC
Confidence 333332 457999999986 787765432 1 2348899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhcc------------c-cchhhhhcccccccccccc-ccCCCCcchheeccCchhhh
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDR------------D-VECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFA 302 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~r------------D-~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~ 302 (472)
++.++|+|||+|+............. . ......+.++.++.+|+.+ ....++.++||||+|+++++
T Consensus 165 ~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~e 244 (432)
T 3n9x_A 165 DCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAE 244 (432)
T ss_dssp TCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHH
Confidence 99999999999987653322110000 0 0123445556555666654 45779999999999999999
Q ss_pred hhhccC----------Ccc-h-----------------------------------------------------------
Q 012042 303 SISKTA----------GFL-D----------------------------------------------------------- 312 (472)
Q Consensus 303 ~~t~~~----------~~l-~----------------------------------------------------------- 312 (472)
++++.. +.. .
T Consensus 245 ll~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (432)
T 3n9x_A 245 LLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP 324 (432)
T ss_dssp HHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCC
T ss_pred HHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCC
Confidence 996311 000 0
Q ss_pred --hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......+++.++.++|.+||..+|++|||+++-.+
T Consensus 325 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 325 INLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp CCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00001457889999999999999999999987766
No 81
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.96 E-value=1.1e-29 Score=253.43 Aligned_cols=227 Identities=18% Similarity=0.198 Sum_probs=170.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++........ .......+.+|+.+|.++.|+++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~i 77 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR----------------RGVSREEIEREVSILRQVLHHNV 77 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS----------------SSBCHHHHHHHHHHHHHCCCTTB
T ss_pred EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc----------------cchhHHHHHHHHHHHHhCCCCCc
Confidence 77889999999999999998 47999999998743211100 00012245689999999988763
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccCC------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC---
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE--- 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g--- 238 (472)
+.+++. +..++||||++|++|.+++.... ...++.+|+.+|.+||++||+||||||.|||++.++
T Consensus 78 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~ 155 (321)
T 2a2a_A 78 --ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI 155 (321)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSS
T ss_pred --ceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCc
Confidence 444442 56899999999999998764321 235889999999999999999999999999999877
Q ss_pred -cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h-
Q 012042 239 -KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K- 313 (472)
Q Consensus 239 -~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~- 313 (472)
.++|+|||.+........ ....++.....+|+.+....++.++|+||||+++++++++..+... .
T Consensus 156 ~~~kl~Dfg~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 225 (321)
T 2a2a_A 156 PHIKLIDFGLAHEIEDGVE----------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225 (321)
T ss_dssp CCEEECCCTTCEECCTTCC----------CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred CCEEEccCccceecCcccc----------ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 799999999986543211 1122333344466655667889999999999999999997643211 0
Q ss_pred ---h----------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ---E----------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ---~----------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++..+.++|.+|+..+|++|||+++...
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 012467888999999999999999999987655
No 82
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.96 E-value=1.8e-29 Score=264.74 Aligned_cols=190 Identities=13% Similarity=0.116 Sum_probs=127.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|.+|.|+++
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~ni 114 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI--------------------DCKRILREIAILNRLNHDHV 114 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHH--------------------HHHHHHHHHHHHHhCCCCCC
Confidence 78899999999999999998 4799999998853211111 11245689999999988653
Q ss_pred Ccceeeec---------CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
..++++ ...||||||++ ++|..++... . ...++.||+.+|.|||++|||||||||.||||+.
T Consensus 115 --v~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~ 191 (458)
T 3rp9_A 115 --VKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ 191 (458)
T ss_dssp --CCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred --CceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECC
Confidence 334332 45799999986 4676654322 1 2348899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhh------------------ccccchhhhhcccccccccccc-ccCCCCcchheeccC
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYF------------------DRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGS 297 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l------------------~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG 297 (472)
++.+||+|||+|+....+...... .........++++.++++|+.+ ....++.++||||||
T Consensus 192 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG 271 (458)
T 3rp9_A 192 DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG 271 (458)
T ss_dssp TCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHH
T ss_pred CCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHH
Confidence 999999999999876432211000 0000123345556566667654 457799999999999
Q ss_pred chhhhhhh
Q 012042 298 RLSFASIS 305 (472)
Q Consensus 298 ~~~f~~~t 305 (472)
++++++++
T Consensus 272 ~il~ellt 279 (458)
T 3rp9_A 272 CIFAELLN 279 (458)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999997
No 83
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.96 E-value=2.2e-30 Score=264.91 Aligned_cols=221 Identities=11% Similarity=0.086 Sum_probs=158.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++.....-.. ....+.+|+.+|..|..
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-------------------~~~~~~~E~~~l~~l~~-- 132 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSN-------------------AIKQMKEEVLRLRLLRG-- 132 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTT-------------------HHHHHHHHHHGGGGSTT--
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchH-------------------HHHHHHHHHHHHHhccc--
Confidence 477889999999999999998 57999999998632110000 01234578866555542
Q ss_pred CCcceeeec-------------C------------------CceeEEeecCCCChhhhhcc----CC---------hHHH
Q 012042 171 FPVPNAVDC-------------N------------------RHCVIMSLVQGYPLVQVNQL----QN---------PDSV 206 (472)
Q Consensus 171 i~vP~~i~~-------------~------------------~~~LVMEyi~G~~L~~l~~~----~~---------~~~i 206 (472)
+.+|+++.. . ..||||||+ +++|.+++.. .. ...+
T Consensus 133 l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i 211 (377)
T 3byv_A 133 IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQL 211 (377)
T ss_dssp CCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHH
Confidence 223443321 0 378999999 5688887542 11 1137
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC-
Q 012042 207 FETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG- 285 (472)
Q Consensus 207 ~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~- 285 (472)
+.||+.+|.|||++||+||||||.|||++.++.+||+|||+|+..... .....+ ..+.+|+.+...
T Consensus 212 ~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------------~~~~~g-~~y~aPE~~~~~~ 278 (377)
T 3byv_A 212 TLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR------------VVSSVS-RGFEPPELEARRA 278 (377)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE------------EECCCC-TTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc------------ccCCCC-cCccChhhhcccc
Confidence 899999999999999999999999999999999999999999853221 111233 333455544444
Q ss_pred ----------CCCcchheeccCchhhhhhhccCCcch-------hhhh--ccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 286 ----------DDGSDIDTDEGSRLSFASISKTAGFLD-------KELA--ASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 286 ----------~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~~~--~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.++.++||||||+++|+++++..+... ..+. ...++.++.++|.+|+..+|++||++.+..
T Consensus 279 ~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l 358 (377)
T 3byv_A 279 TISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 358 (377)
T ss_dssp STHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHH
T ss_pred cccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHh
Confidence 789999999999999999997643311 1111 257899999999999999999999987754
Q ss_pred C
Q 012042 347 D 347 (472)
Q Consensus 347 ~ 347 (472)
+
T Consensus 359 ~ 359 (377)
T 3byv_A 359 E 359 (377)
T ss_dssp T
T ss_pred h
Confidence 4
No 84
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.96 E-value=2e-29 Score=261.13 Aligned_cols=213 Identities=12% Similarity=0.119 Sum_probs=157.7
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCCc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~v 173 (472)
.+.||+|+||.||+|.+ .+|+.||||+++... .+.+|+.++.++ .|++ +
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------------------------~~~~E~~~~~~~~~hp~--i 117 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP---------------------------KARREVELHWRASQCPH--I 117 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECSH---------------------------HHHHHHHHHHHHTTSTT--B
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCcch---------------------------hHHHHHHHHHHhcCCCC--c
Confidence 47899999999999998 479999999985220 134688887665 4443 3
Q ss_pred ceeeec--------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-
Q 012042 174 PNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD- 236 (472)
Q Consensus 174 P~~i~~--------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~- 236 (472)
++++++ ...|||||||+|++|.+++... .+ ..++.+|+.+|.|||++||+||||||.|||++.
T Consensus 118 v~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~ 197 (400)
T 1nxk_A 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 197 (400)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS
T ss_pred ceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC
Confidence 444432 3478999999999998876432 12 248899999999999999999999999999987
Q ss_pred --CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 237 --DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 237 --~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
++.++|+|||++....... ......++.++++|+.+....++.++||||||+++|+++++...+..
T Consensus 198 ~~~~~~kl~DFG~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 267 (400)
T 1nxk_A 198 RPNAILKLTDFGFAKETTSHN----------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_dssp STTCCEEECCCTTCEECC---------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred CCCccEEEEecccccccCCCC----------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 7889999999998653221 11223344455677766678899999999999999999997643211
Q ss_pred ---------hhhh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ---------KELA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ---------~~~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+. ...++.++.++|.+||..+|++|||+++-..
T Consensus 268 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 268 GLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0110 1357889999999999999999999877654
No 85
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.96 E-value=6e-30 Score=249.46 Aligned_cols=223 Identities=13% Similarity=0.112 Sum_probs=164.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .++..||||++........ .....+.+|+.++.++.|+++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~h~~i 71 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-------------------GVEHQLRREVEIQSHLRHPNI 71 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHH-------------------TCHHHHHHHHHHHTTCCCTTB
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchh-------------------hHHHHHHHHHHHHHcCCCCCC
Confidence 67789999999999999998 4688999999853210000 011245689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--C-C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--Q-N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~-~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++++ +..++||||++|++|...+.. . . ...++.+|+.+|.+||+.||+||||||.|||++.++.++
T Consensus 72 --~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~ 149 (279)
T 3fdn_A 72 --LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK 149 (279)
T ss_dssp --CCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEE
T ss_pred --cchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEE
Confidence 444443 567999999999999876532 1 1 235889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------h
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------E 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~ 314 (472)
|+|||++........ ..+.+.....+|+.+....++.++|+||||+++++++++..+.... .
T Consensus 150 l~Dfg~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 218 (279)
T 3fdn_A 150 IADFGWSVHAPSSRR-----------TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218 (279)
T ss_dssp ECSCCEESCC-------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred EEeccccccCCcccc-----------cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH
Confidence 999998864332111 1122333344566556778899999999999999999976432110 0
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+..++..+.++|.+|+..+|.+|||+++-.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 219 ISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 113457888999999999999999999887655
No 86
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.96 E-value=9.7e-30 Score=253.98 Aligned_cols=223 Identities=13% Similarity=0.102 Sum_probs=152.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++....... ...+.+|+.+|.++.|+++
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~hp~i 65 (317)
T 2pmi_A 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT---------------------PSTAIREISLMKELKHENI 65 (317)
T ss_dssp ------------CEEEEEECSSSCCEEEEEEEECCSTTCS---------------------CHHHHHHHHHHTTCCBTTB
T ss_pred eeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccccc---------------------HHHHHHHHHHHHhcCCCCc
Confidence 56778999999999999998 4799999999864321100 0134579999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
+.+++. +..+|||||++| +|.+++.. ..+ ..++.||+.+|.|||++||+||||||.|||++
T Consensus 66 --v~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~ 142 (317)
T 2pmi_A 66 --VRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN 142 (317)
T ss_dssp --CCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred --ceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc
Confidence 444443 568999999996 67665421 111 24778999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
.++.++|+|||.+.....+... .....++..+.+|+.+.. ..++.++||||||+++|+++++..++...
T Consensus 143 ~~~~~kl~Dfg~~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 143 KRGQLKLGDFGLARAFGIPVNT---------FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp TTCCEEECCCSSCEETTSCCCC---------CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCCCEEECcCccceecCCCccc---------CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999865432110 111123333445555433 56899999999999999999976432100
Q ss_pred ------h----------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------E----------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------~----------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++.++.++|.+||..+|++|||+++...
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 214 DEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 001257788999999999999999999988776
Q ss_pred C
Q 012042 348 D 348 (472)
Q Consensus 348 ~ 348 (472)
-
T Consensus 294 h 294 (317)
T 2pmi_A 294 H 294 (317)
T ss_dssp S
T ss_pred C
Confidence 3
No 87
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=9.2e-30 Score=256.62 Aligned_cols=226 Identities=15% Similarity=0.046 Sum_probs=163.3
Q ss_pred CceeeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH
Q 012042 90 GVFTAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM 163 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L 163 (472)
.--|.+++.||+|+||.||+|.+ .+++.||||+++.....-. ...+.+|+.+|
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------~~~~~~E~~~l 79 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---------------------HRALMSELKIL 79 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH---------------------HHHHHHHHHHH
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHH---------------------HHHHHHHHHHH
Confidence 33478899999999999999983 3568999999864321110 12356899999
Q ss_pred HHh-hhCCCCcceeeec-----CCceeEEeecCCCChhhhhccC------------------------------------
Q 012042 164 KAL-EDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ------------------------------------ 201 (472)
Q Consensus 164 ~~L-~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~------------------------------------ 201 (472)
.++ +|++ ++.+++. ...++||||++|++|.+++...
T Consensus 80 ~~l~~hpn--iv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (359)
T 3vhe_A 80 IHIGHHLN--VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSIT 157 (359)
T ss_dssp HHHCCCTT--BCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------
T ss_pred HhhcCCcc--eeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccC
Confidence 999 4444 3444442 3479999999999998875321
Q ss_pred --------------------------------C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeC
Q 012042 202 --------------------------------N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245 (472)
Q Consensus 202 --------------------------------~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDF 245 (472)
. ...++.+|+.+|.|||++||+||||||.|||++.++.++|+||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Df 237 (359)
T 3vhe_A 158 SSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 237 (359)
T ss_dssp --------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred ccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEec
Confidence 1 1237889999999999999999999999999999999999999
Q ss_pred CCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch----h-------
Q 012042 246 PQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD----K------- 313 (472)
Q Consensus 246 G~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~----~------- 313 (472)
|++......... .......++..+++|+.+....++.++||||||+++|++++ +..+... .
T Consensus 238 g~a~~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 310 (359)
T 3vhe_A 238 GLARDIYKDPDY-------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 310 (359)
T ss_dssp GGGSCTTSCTTC-------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred cceeeecccccc-------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH
Confidence 999755322110 00111122222345555567889999999999999999998 6533211 0
Q ss_pred ----hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ----ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ----~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
......++.++.++|.+|+..+|.+|||+++-
T Consensus 311 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 346 (359)
T 3vhe_A 311 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 346 (359)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 01134578899999999999999999998754
No 88
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.96 E-value=1.5e-29 Score=257.98 Aligned_cols=224 Identities=16% Similarity=0.084 Sum_probs=158.0
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh--h
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE--D 168 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~--~ 168 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++.....-.. ....+.+|+.++..|. |
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------~~~~~~~E~~~~~~l~~~h 123 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRS-------------------ELERLHEATFAAARLLGES 123 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHH-------------------HHHHHHHHHHHHHHHHC--
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccccc-------------------HHHHHHHHHHHHHHhcccC
Confidence 377889999999999999998 47999999999754321110 1123456777666665 4
Q ss_pred CCCC--c-----c-eeeec------------------CCceeEEeecCCCChhhhhcc-----C-ChH-------HHHHH
Q 012042 169 HGFP--V-----P-NAVDC------------------NRHCVIMSLVQGYPLVQVNQL-----Q-NPD-------SVFET 209 (472)
Q Consensus 169 ~gi~--v-----P-~~i~~------------------~~~~LVMEyi~G~~L~~l~~~-----~-~~~-------~i~~q 209 (472)
+++. + | ..+.. ...||||||++ ++|.+++.. . ... .++.|
T Consensus 124 p~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~q 202 (371)
T 3q60_A 124 PEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQ 202 (371)
T ss_dssp --------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHH
Confidence 3310 0 0 00000 23699999999 788887532 1 222 34589
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--CCC
Q 012042 210 IIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--GDD 287 (472)
Q Consensus 210 Il~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--~~~ 287 (472)
|+.+|.|||++|||||||||.|||++.++.+||+|||+|........ ....+..+.+|+.+.. ..+
T Consensus 203 i~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~------------~~~~t~~y~aPE~~~~~~~~~ 270 (371)
T 3q60_A 203 LIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP------------ASSVPVTYAPREFLNASTATF 270 (371)
T ss_dssp HHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE------------GGGSCGGGCCHHHHTCSEEEC
T ss_pred HHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc------------CccCCcCCcChhhccCCCCCc
Confidence 99999999999999999999999999999999999999986532211 1122333345555444 678
Q ss_pred CcchheeccCchhhhhhhccCCcchh-------------------hh---hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 288 GSDIDTDEGSRLSFASISKTAGFLDK-------------------EL---AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 288 ~~~sDiySlG~~~f~~~t~~~~~l~~-------------------~~---~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+.++||||||+++|+++++..++... .. ....++..+.++|.+|+..+|++||++++.
T Consensus 271 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 350 (371)
T 3q60_A 271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEA 350 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHH
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 99999999999999999975432111 00 113678999999999999999999998776
Q ss_pred CC
Q 012042 346 SD 347 (472)
Q Consensus 346 ~~ 347 (472)
..
T Consensus 351 l~ 352 (371)
T 3q60_A 351 ME 352 (371)
T ss_dssp TT
T ss_pred hc
Confidence 54
No 89
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.96 E-value=2.5e-29 Score=243.78 Aligned_cols=220 Identities=12% Similarity=0.069 Sum_probs=161.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++........ ...+.+|+..+..+ .|++
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~e~~~~~~l~~h~~ 72 (289)
T 1x8b_A 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD--------------------EQNALREVYAHAVLGQHSH 72 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHH--------------------HHHHHHHHHHHHHSCSCTT
T ss_pred hhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHH--------------------HHHHHHHHHHHHHhCCCCC
Confidence 678899999999999999994 7999999998743221111 12345788999988 6654
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC-------C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ +.+++. +..++||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.
T Consensus 73 i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~ 150 (289)
T 1x8b_A 73 V--VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 150 (289)
T ss_dssp B--CCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-
T ss_pred e--eeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcC
Confidence 3 444432 6789999999999998876421 1 1248899999999999999999999999999984
Q ss_pred C-------------------CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheecc
Q 012042 237 D-------------------EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEG 296 (472)
Q Consensus 237 ~-------------------g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySl 296 (472)
+ ..++|+|||.+.....+... .+....++|+.+.. ..++.++|||||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------~gt~~y~aPE~~~~~~~~~~~~Di~sl 217 (289)
T 1x8b_A 151 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE-------------EGDSRFLANEVLQENYTHLPKADIFAL 217 (289)
T ss_dssp -------------------CCCEEECCCTTCEETTCSCCC-------------CCCGGGCCHHHHTTCCTTHHHHHHHHH
T ss_pred CCCCcccccccccccccCCceEEEEcccccccccCCcccc-------------CCCccccChhHhcCCCCCCchhhHHHH
Confidence 4 37999999999866433210 12223345554433 356689999999
Q ss_pred CchhhhhhhccCCcchh-----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 297 SRLSFASISKTAGFLDK-----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 297 G~~~f~~~t~~~~~l~~-----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|+++++++++....... ......++..+.++|.+|+..+|++|||+++..+
T Consensus 218 G~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 218 ALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHHHHHHTTCCCCCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhcCCCCCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 99999999875322110 0123568899999999999999999999987655
No 90
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=8.6e-30 Score=253.92 Aligned_cols=223 Identities=13% Similarity=0.035 Sum_probs=163.3
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.+|+.||||++....... ...+.+|+.+|.++.|+++
T Consensus 41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~l~h~~i- 97 (321)
T 2qkw_B 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG----------------------IEEFETEIETLSFCRHPHL- 97 (321)
T ss_dssp CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSH----------------------HHHHHHHHHGGGSCCCTTB-
T ss_pred cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHH----------------------HHHHHHHHHHHHhCCCCCE-
Confidence 56678999999999999998889999999876432111 1135679999999987653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC------Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+.++++ +..++||||++|++|.+++... .+ ..++.+|+.+|.|||++||+||||||.|||++.++
T Consensus 98 -v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~ 176 (321)
T 2qkw_B 98 -VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENF 176 (321)
T ss_dssp -CCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTC
T ss_pred -eeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCC
Confidence 444443 5689999999999998876321 11 24889999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch------
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------ 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------ 312 (472)
.++|+|||.+........... .....+...+.+|+.+....++.++||||||+++++++++..+...
T Consensus 177 ~~kl~Dfg~~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~ 249 (321)
T 2qkw_B 177 VPKITDFGISKKGTELDQTHL-------STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM 249 (321)
T ss_dssp CEEECCCTTCEECSSSSCCCC-------BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC
T ss_pred CEEEeeccccccccccccccc-------ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH
Confidence 999999999986542211110 0111223333455555567899999999999999999997532210
Q ss_pred -----h-----------hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 -----K-----------EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 -----~-----------~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+ .+ .....+..+.++|.+|+..+|++|||+++-.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 307 (321)
T 2qkw_B 250 VNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307 (321)
T ss_dssp CCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 0 00 0112334577899999999999999987654
No 91
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.96 E-value=1.2e-29 Score=258.97 Aligned_cols=221 Identities=12% Similarity=0.037 Sum_probs=159.5
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+. +|+.||||++....... ..+.+|+.+++.|.|++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~hpn 77 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-----------------------ENVQREIINHRSLRHPN 77 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC-----------------------HHHHHHHHHHHHCCCTT
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc-----------------------HHHHHHHHHHHhCCCCC
Confidence 3778899999999999999994 79999999986432111 13457999999998876
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc-
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK- 239 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~- 239 (472)
+ +.+++. ...++||||++|++|..++.. .. ...++.||+.+|.|||++||+||||||.|||++.++.
T Consensus 78 i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~ 155 (361)
T 3uc3_A 78 I--VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAP 155 (361)
T ss_dssp B--CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSC
T ss_pred C--CcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCc
Confidence 4 344432 568999999999999887532 11 2358899999999999999999999999999986655
Q ss_pred -EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcc-hheeccCchhhhhhhccCCcchh----
Q 012042 240 -VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSD-IDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 240 -vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~-sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
++|+|||+|....... ......++..+++|+.+....++.. +||||||+++++++++..++...
T Consensus 156 ~~kl~Dfg~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 225 (361)
T 3uc3_A 156 RLKICDFGYSKSSVLHS----------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR 225 (361)
T ss_dssp CEEECCCCCC-------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC
T ss_pred eEEEeecCccccccccC----------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH
Confidence 9999999987432111 0112234444456665545555444 99999999999999986433110
Q ss_pred -------hhh--------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------ELA--------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------~~~--------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+. ...++..+.++|.+||..+|++|||+++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 226 DYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 010 1257889999999999999999999987765
No 92
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96 E-value=7.4e-30 Score=258.92 Aligned_cols=224 Identities=15% Similarity=0.157 Sum_probs=163.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++.... ... . .....+.+|+.+|..+.|+++
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~----------~-------~~~~~~~~E~~~l~~l~hpnI 71 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL--LKK----------S-------DMHMRVEREISYLKLLRHPHI 71 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--HHH----------T-------TCSHHHHHHHHHHTTCCCTTB
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH--ccc----------h-------hHHHHHHHHHHHHHhCCCCCC
Confidence 67889999999999999998 679999999985211 000 0 001245689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhc-c-C----ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQ-L-Q----NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~-~-~----~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||+ +++|.+.+. . . ....++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 72 --v~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~k 148 (336)
T 3h4j_B 72 --IKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVK 148 (336)
T ss_dssp --CCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEE
T ss_pred --CeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEE
Confidence 444442 5679999999 556655432 1 1 1235889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCC-CcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDD-GSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~-~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||++....... ......++..+.+|+.+.+..+ +.++||||||+++|+++++..++...
T Consensus 149 l~DFG~s~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~ 218 (336)
T 3h4j_B 149 IADFGLSNIMTDGN----------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218 (336)
T ss_dssp ECCSSCTBTTTTSB----------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC
T ss_pred EEEeccceeccCCc----------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 99999997543221 1112233444455665544443 78999999999999999976432110
Q ss_pred ------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
...+..++..+.++|.+|+..+|.+|||+++-...
T Consensus 219 ~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 219 KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01234578899999999999999999999887663
No 93
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=2.6e-29 Score=249.06 Aligned_cols=233 Identities=11% Similarity=-0.013 Sum_probs=163.5
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
--|.+.+.||+|+||.||+|.+ .+|+.||||++....... ...+.+|+.++..+.|+
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~l~h~ 86 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD----------------------REEAQREADMHRLFNHP 86 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHH----------------------HHHHHHHHHHHHTCCCT
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHH----------------------HHHHHHHHHHHhhcCCC
Confidence 3578899999999999999998 679999999886432111 12356899999999887
Q ss_pred CCCcceeeec--------CCceeEEeecCCCChhhhhcc-----C-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 170 GFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQL-----Q-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 170 gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~-----~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
++ ++++++ ...++||||++|++|.+++.. . .+ ..++.+|+.+|.+||++||+||||||.|
T Consensus 87 ~i--v~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~N 164 (317)
T 2buj_A 87 NI--LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTN 164 (317)
T ss_dssp TB--CCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred Ce--eeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 63 333332 357899999999999876532 1 11 2488999999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC---CCCcchheeccCchhhhhhhccC
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG---DDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~---~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
||++.++.++|+|||.+.......................+.....+|+.+... .++.++||||||+++|+++++..
T Consensus 165 Il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 244 (317)
T 2buj_A 165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244 (317)
T ss_dssp EEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSC
T ss_pred EEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999999999987654221110000000111112223333455543322 26889999999999999999764
Q ss_pred Ccch---------hh------h-hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 309 GFLD---------KE------L-AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 309 ~~l~---------~~------~-~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+... .. . ....++..+.++|.+|+..+|.+||++++..+
T Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 299 (317)
T 2buj_A 245 PYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299 (317)
T ss_dssp TTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 3211 00 0 12467889999999999999999999876544
No 94
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=246.90 Aligned_cols=226 Identities=14% Similarity=0.161 Sum_probs=156.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++.... .... .....+.+|+.++.++.|+++
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~-----------------~~~~~~~~e~~~l~~l~h~~i 73 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA--MYKA-----------------GMVQRVQNEVKIHCQLKHPSI 73 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHT-----------------TCHHHHHHHHHHHTTBCCTTB
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh--hhhh-----------------hHHHHHHHHHHHHHhCCCCCe
Confidence 67789999999999999998 579999999985221 1000 001245689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. +..++||||++|++|.+++... .+ ..++.+++.+|.+||++||+||||||.|||++.++.+
T Consensus 74 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~ 151 (278)
T 3cok_A 74 --LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNI 151 (278)
T ss_dssp --CCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCE
T ss_pred --EeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCE
Confidence 444443 5679999999999998876432 11 2488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------- 312 (472)
+|+|||.+.....+.... ....+.....+|+.+....++.++|+||||+++++++++..+...
T Consensus 152 kl~dfg~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 222 (278)
T 3cok_A 152 KIADFGLATQLKMPHEKH---------YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN 222 (278)
T ss_dssp EECCCTTCEECC-------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----
T ss_pred EEEeecceeeccCCCCcc---------eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH
Confidence 999999998664332111 112233333455655667789999999999999999997543210
Q ss_pred h-----hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 313 K-----ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 313 ~-----~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. ...+..++.++.++|.+|+..+|++|||+++..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 223 KVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0 01134578889999999999999999999887764
No 95
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=2.7e-29 Score=247.67 Aligned_cols=224 Identities=11% Similarity=0.113 Sum_probs=169.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.+.||+|+||.||+|.+ .+|+.||||++......- ....+.+|+.+|.++.|++
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h~~ 81 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED---------------------EIEDIQQEITVLSQCDSPY 81 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST---------------------THHHHHHHHHHHHHCCCTT
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH---------------------HHHHHHHHHHHHHhCCCCC
Confidence 377889999999999999998 579999999986432110 0123567999999998765
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+ +.+++. ...++||||++|++|.+++... . ...++.+|+.+|.+||+.||+||||||.|||++.++.++
T Consensus 82 i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k 159 (303)
T 3a7i_A 82 V--TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 159 (303)
T ss_dssp B--CCEEEEEEETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred E--eEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEE
Confidence 3 444432 5689999999999999876432 1 124889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh--------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------- 313 (472)
|+|||.+........ ....+.+.....+|+.+....++.++|+||||+++++++++..+....
T Consensus 160 l~Dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 230 (303)
T 3a7i_A 160 LADFGVAGQLTDTQI---------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 230 (303)
T ss_dssp ECCCTTCEECBTTBC---------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EeecccceecCcccc---------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH
Confidence 999999976543211 011122333334555556678899999999999999999976432110
Q ss_pred ------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+..+|.+|+..+|++|||+++...
T Consensus 231 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 231 IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp HHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred hhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0123468889999999999999999999988766
No 96
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.96 E-value=7.9e-30 Score=249.06 Aligned_cols=222 Identities=13% Similarity=0.056 Sum_probs=165.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. ++..||||++....... ..+.+|+.+|.++.|+++
T Consensus 15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------~~~~~E~~~l~~l~h~~i 71 (288)
T 3kfa_A 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----------------------EEFLKEAAVMKEIKHPNL 71 (288)
T ss_dssp EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHH-----------------------HHHHHHHHHHHHCCCTTB
T ss_pred eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHH-----------------------HHHHHHHHHHHhCCCCCE
Confidence 667899999999999999994 58899999986432211 134579999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.+++. +..++||||++|++|.+++... .+ ..++.+|+.+|.+||++||+||||||.|||++.++.
T Consensus 72 --~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~ 149 (288)
T 3kfa_A 72 --VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL 149 (288)
T ss_dssp --CCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGC
T ss_pred --eeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCC
Confidence 444443 5679999999999998876421 11 247789999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD------ 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~------ 312 (472)
++|+|||.+.....+.... ...........+|+.+....++.++|+||||++++++++ +..+...
T Consensus 150 ~~l~Dfg~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~ 221 (288)
T 3kfa_A 150 VKVADFGLSRLMTGDTYTA--------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221 (288)
T ss_dssp EEECCCCGGGTSCSSSSEE--------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEEccCccceeccCCcccc--------ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999997554321110 000111112335555556788999999999999999998 5432210
Q ss_pred -h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ......++..+.++|.+|+..+|.+|||+++-.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 0 0123567889999999999999999999987643
No 97
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.96 E-value=2.2e-29 Score=244.81 Aligned_cols=220 Identities=12% Similarity=0.138 Sum_probs=164.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. ++..||+|++....... ...+.+|+.+|.++.|+++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~----------------------~~~~~~E~~~l~~l~h~~i 68 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED----------------------VDRFKQEIEIMKSLDHPNI 68 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC----------------------HHHHHHHHHHHHTCCCTTB
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch----------------------HHHHHHHHHHHHhCCCCCE
Confidence 778899999999999999984 68899999886321110 1235579999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---cCCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI---DDDE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl---~~~g 238 (472)
+.+++. ...++||||++|++|.+.+... . ...++.+++.+|.+||++||+||||||.|||+ +.++
T Consensus 69 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~ 146 (277)
T 3f3z_A 69 --IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDS 146 (277)
T ss_dssp --CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTC
T ss_pred --eeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCC
Confidence 444442 5679999999999997764321 1 23588999999999999999999999999999 7778
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h--
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K-- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~-- 313 (472)
.++|+|||.+........ .....+.....+|+ ...+.++.++|+||||+++++++++..+... .
T Consensus 147 ~~~l~Dfg~~~~~~~~~~----------~~~~~~t~~y~aPE-~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 215 (277)
T 3f3z_A 147 PLKLIDFGLAARFKPGKM----------MRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV 215 (277)
T ss_dssp CEEECCCTTCEECCTTSC----------BCCCCSCTTTCCHH-HHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred cEEEEecccceeccCccc----------hhccCCCCCccChH-HhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999999976542211 11112333333444 4456699999999999999999997643211 0
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++..+.++|.+|++.+|++||++.+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 216 MLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 11267889999999999999999999987665
No 98
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=1.4e-29 Score=244.18 Aligned_cols=220 Identities=12% Similarity=0.026 Sum_probs=163.5
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.+++.||||+++...... ..+.+|+.++.++.|+++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~-----------------------~~~~~e~~~l~~l~h~~i- 65 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-----------------------EDFIEEAEVMMKLSHPKL- 65 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH-----------------------HHHHHHHHHHHTCCCTTB-
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCH-----------------------HHHHHHHHHHHhCCCCCE-
Confidence 67789999999999999999888899999986432211 134579999999987653
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+++... .. ..++.+++.+|.+||++||+||||||.||+++.++.++
T Consensus 66 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~k 144 (267)
T 3t9t_A 66 -VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK 144 (267)
T ss_dssp -CCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEE
T ss_pred -eeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEE
Confidence 444442 5689999999999998876422 12 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~~------- 313 (472)
|+|||.+.....+... ............+|+......++.++|+||||++++++++ +..+....
T Consensus 145 l~dfg~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 216 (267)
T 3t9t_A 145 VSDFGMTRFVLDDQYT--------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 216 (267)
T ss_dssp ECCTTGGGGBCCHHHH--------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred Eccccccccccccccc--------ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH
Confidence 9999998754322110 0001111112234554455778999999999999999998 54322110
Q ss_pred -------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 -------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 -------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
......++..+.++|.+|+..+|++|||.++.
T Consensus 217 ~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 255 (267)
T 3t9t_A 217 DISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRL 255 (267)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHH
Confidence 01134568889999999999999999998764
No 99
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.2e-29 Score=252.80 Aligned_cols=226 Identities=13% Similarity=0.034 Sum_probs=163.5
Q ss_pred eeeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+++.||+|+||.||+|.+ .++..||||+++.....- ....+.+|+.+|.+
T Consensus 46 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~ 104 (344)
T 1rjb_A 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS---------------------EREALMSELKMMTQ 104 (344)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------------------------CHHHHHHHHHHHH
T ss_pred HceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHH---------------------HHHHHHHHHHHHHh
Confidence 467889999999999999986 245689999986321100 01235689999999
Q ss_pred h-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC-------------------------h----HHHHHHHH
Q 012042 166 L-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-------------------------P----DSVFETII 211 (472)
Q Consensus 166 L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-------------------------~----~~i~~qIl 211 (472)
| .|+++ +.+++. +..++||||++|++|.+++.... + ..++.+|+
T Consensus 105 l~~hp~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 182 (344)
T 1rjb_A 105 LGSHENI--VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVA 182 (344)
T ss_dssp HCCCTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHH
T ss_pred hcCCCCe--eeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHH
Confidence 9 67653 444442 67899999999999988764221 1 23788999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcch
Q 012042 212 GLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDI 291 (472)
Q Consensus 212 ~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~s 291 (472)
.+|.|||++||+||||||.|||++.++.++|+|||++.......... ......++....+|+.+....++.++
T Consensus 183 ~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~ 255 (344)
T 1rjb_A 183 KGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV-------VRGNARLPVKWMAPESLFEGIYTIKS 255 (344)
T ss_dssp HHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSE-------EETTEEECGGGCCHHHHHHCCCCHHH
T ss_pred HHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccce-------eccCccCccCccCHHHhccCCCChhH
Confidence 99999999999999999999999999999999999997553221100 00111122223455545567899999
Q ss_pred heeccCchhhhhhh-ccCCcch----h---h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 292 DTDEGSRLSFASIS-KTAGFLD----K---E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 292 DiySlG~~~f~~~t-~~~~~l~----~---~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
||||||++++++++ +..+... . . ..+..++..+..+|.+|+..+|.+|||+++..+
T Consensus 256 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 327 (344)
T 1rjb_A 256 DVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 327 (344)
T ss_dssp HHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99999999999998 6432211 0 0 013456889999999999999999999876543
No 100
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=260.03 Aligned_cols=220 Identities=16% Similarity=0.152 Sum_probs=160.4
Q ss_pred eecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 94 AVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 94 ~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
...+.||+|+||.||+|.+ .+|+.||||+++...... ...+.+|+.+|.+|.|+++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~l~hpnI- 148 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD----------------------KEEVKNEISVMNQLDHANL- 148 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHH----------------------HHHHHHHHHHHTTCCCTTB-
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccccc----------------------HHHHHHHHHHHHhCCCCCC-
Confidence 3467899999999999998 579999999987432110 1235689999999988753
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE--cCCCc
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI--DDDEK 239 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl--~~~g~ 239 (472)
+.++++ +..+|||||++|++|.+.+... . ...++.||+.+|.|||+.||+||||||.|||+ +.++.
T Consensus 149 -v~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~ 227 (373)
T 2x4f_A 149 -IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQ 227 (373)
T ss_dssp -CCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTE
T ss_pred -CeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCc
Confidence 444443 5689999999999987754321 1 12478899999999999999999999999999 45678
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------- 312 (472)
++|+|||++........ ....++...+++|+.+....++.++||||||+++|+++++..++..
T Consensus 228 ~kl~DFG~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 297 (373)
T 2x4f_A 228 IKIIDFGLARRYKPREK----------LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297 (373)
T ss_dssp EEECCCSSCEECCTTCB----------CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred EEEEeCCCceecCCccc----------cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999986543211 1112344444566655667889999999999999999997643311
Q ss_pred hhh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 KEL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+ ....++.++.++|.+||..+|.+||++++...
T Consensus 298 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 298 NNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 001 11467899999999999999999999987654
No 101
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.96 E-value=1.8e-29 Score=249.18 Aligned_cols=224 Identities=13% Similarity=0.066 Sum_probs=163.6
Q ss_pred eeeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+.+.||+|+||.||+|.+ .+++.||||+++...... . ...+.+|+.+|.+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~--------------------~~~~~~E~~~l~~ 82 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS-E--------------------LRDLLSEFNVLKQ 82 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHH-H--------------------HHHHHHHHHHHTT
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHH-H--------------------HHHHHHHHHHHhh
Confidence 367889999999999999986 235789999986432110 0 1235679999999
Q ss_pred hhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---------------------------C---hHHHHHHHH
Q 012042 166 LEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---------------------------N---PDSVFETII 211 (472)
Q Consensus 166 L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---------------------------~---~~~i~~qIl 211 (472)
|.|+++ +.+++. +..++||||++|++|.+++... . ...++.+|+
T Consensus 83 l~hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 160 (314)
T 2ivs_A 83 VNHPHV--IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160 (314)
T ss_dssp CCCTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHH
T ss_pred CCCCce--eeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHH
Confidence 987653 444442 6689999999999998876421 1 124788999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcch
Q 012042 212 GLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDI 291 (472)
Q Consensus 212 ~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~s 291 (472)
.+|.|||++||+||||||.|||++.++.++|+|||++.......... . ..........++|+.+....++.++
T Consensus 161 ~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~--~-----~~~~~~~~~y~aPE~~~~~~~~~~~ 233 (314)
T 2ivs_A 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV--K-----RSQGRIPVKWMAIESLFDHIYTTQS 233 (314)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE--C-----SSCCCSCGGGCCHHHHHHCEECHHH
T ss_pred HHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccce--e-----ccCCCCcccccChhhhcCCCcCchh
Confidence 99999999999999999999999999999999999998664332110 0 0000111123355545567789999
Q ss_pred heeccCchhhhhhh-ccCCcch-------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 292 DTDEGSRLSFASIS-KTAGFLD-------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 292 DiySlG~~~f~~~t-~~~~~l~-------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
||||||++++++++ +..+... . ......++..+.++|.+|+..+|++||++++.
T Consensus 234 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 302 (314)
T 2ivs_A 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302 (314)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99999999999998 5432210 0 01234688999999999999999999998764
No 102
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.96 E-value=1.7e-29 Score=246.87 Aligned_cols=223 Identities=13% Similarity=0.026 Sum_probs=154.8
Q ss_pred eeeecceecccCceeEEEEEeCC----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARED----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+.+.||+|+||.||+|.+.. +..||||+++...... ....+.+|+.+|.++.
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~ 74 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---------------------VREKFLQEALTMRQFD 74 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHH---------------------HHHHHHHHHHHHHTCC
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHH---------------------HHHHHHHHHHHHHhCC
Confidence 36788999999999999998842 4569999875322110 1124568999999998
Q ss_pred hCCCCcceeee---cCCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.+++ .+..++||||++|++|.+++... .. ..++.+++.+|.+||++||+||||||.|||++.+
T Consensus 75 h~~i--v~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~ 152 (281)
T 1mp8_A 75 HPHI--VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN 152 (281)
T ss_dssp CTTB--CCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred CCcc--ceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC
Confidence 8763 44444 36789999999999998876422 11 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~ 313 (472)
+.++|+|||++.......... ......+..+.+|+.+....++.++|+||||++++++++ +..+... .
T Consensus 153 ~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~ 224 (281)
T 1mp8_A 153 DCVKLGDFGLSRYMEDSTYYK--------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 224 (281)
T ss_dssp TEEEECC---------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred CCEEECccccccccCcccccc--------cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH
Confidence 999999999997654321100 000111122345555556788999999999999999986 5432210 0
Q ss_pred ----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .....++..+..+|.+|+..+|++|||..+.
T Consensus 225 ~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 267 (281)
T 1mp8_A 225 DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267 (281)
T ss_dssp GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0 1235678899999999999999999998764
No 103
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.96 E-value=9.9e-30 Score=258.09 Aligned_cols=218 Identities=16% Similarity=0.165 Sum_probs=161.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++...... ..+|+.+|.++ .|++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------------------------~~~E~~~l~~~~~hp~ 77 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD--------------------------PTEEIEILLRYGQHPN 77 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC--------------------------CHHHHHHHHHHTTSTT
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC--------------------------hHHHHHHHHHhcCCCC
Confidence 77889999999999999998 47999999998643211 12588888888 4554
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC---
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD--- 237 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~--- 237 (472)
+ +.+++. ...|+||||++|++|.+.+... . ...++.+|+.+|.|||++||+||||||.|||+.+.
T Consensus 78 i--v~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~ 155 (342)
T 2qr7_A 78 I--ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155 (342)
T ss_dssp B--CCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCS
T ss_pred c--CeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCC
Confidence 2 334432 5679999999999998865332 1 23488999999999999999999999999998533
Q ss_pred -CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----
Q 012042 238 -EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 238 -g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
+.++|+|||++........ ......+...+++|+.+....++.++|+||||+++|+++++..++..
T Consensus 156 ~~~~kl~Dfg~a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~ 226 (342)
T 2qr7_A 156 PESIRICDFGFAKQLRAENG---------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD 226 (342)
T ss_dssp GGGEEECCCTTCEECBCTTC---------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS
T ss_pred cCeEEEEECCCcccCcCCCC---------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC
Confidence 2499999999986543211 11122334444566655555688999999999999999997643311
Q ss_pred --hh----hh----------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --KE----LA----------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --~~----~~----------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. +. ...++.++.++|.+||..+|++||++.+-..
T Consensus 227 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 227 TPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 10 1357899999999999999999999876654
No 104
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.96 E-value=1.7e-29 Score=245.68 Aligned_cols=223 Identities=14% Similarity=0.130 Sum_probs=146.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......-. .....+.+|+.++.++.|+++
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~h~~i 75 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKS-------------------DMQGRIEREISYLRLLRHPHI 75 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC------------------------CHHHHHHHHHHHHHCCCTTB
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchH-------------------HHHHHHHHHHHHHHhCCCCCe
Confidence 66779999999999999998 5799999999864321110 011245689999999988763
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhh-ccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVN-QLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~-~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||+. ++|.+.+ ... . ...++.+++.+|.+||++||+||||||.|||++.++.++
T Consensus 76 --~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~k 152 (275)
T 2eue_A 76 --IKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp --CCEEEEEECSSCEEEEEECCC-EEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEE
T ss_pred --EEEEEEEecCCeEEEEehhcC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEE
Confidence 444443 67899999995 4555543 211 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||.+........ .....++....+|+.+.... .+.++|+||||+++++++++..+....
T Consensus 153 l~Dfg~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 222 (275)
T 2eue_A 153 IADFGLSNIMTDGNF----------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 222 (275)
T ss_dssp ECCSSCC-------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EeecccceeccCccc----------ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999975432211 11112333334555444433 378999999999999999976432110
Q ss_pred h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++..+.++|.+|++.+|.+|||+++..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 223 NISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHhCCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0 113557889999999999999999999988765
No 105
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.96 E-value=1.1e-29 Score=251.74 Aligned_cols=230 Identities=12% Similarity=0.129 Sum_probs=159.1
Q ss_pred eee-cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhC
Q 012042 93 TAV-GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDH 169 (472)
Q Consensus 93 ~~i-~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~ 169 (472)
|.+ .+.||+|+||.||+|.+ .+|+.||||+++...... ...+.+|+.+|.++ .|+
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~~~~h~ 71 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI----------------------RSRVFREVEMLYQCQGHR 71 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC----------------------HHHHHHHHHHHHHTCCCT
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh----------------------HHHHHHHHHHHHHhcCCC
Confidence 555 47899999999999998 579999999986432111 11345799999986 455
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ ++.+++. +..++||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.++.
T Consensus 72 ~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~ 149 (316)
T 2ac3_A 72 N--VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ 149 (316)
T ss_dssp T--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS
T ss_pred C--eeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC
Confidence 4 3444442 6789999999999998875321 1 2248899999999999999999999999999987665
Q ss_pred ---EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-----CCCCcchheeccCchhhhhhhccCCcc
Q 012042 240 ---VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-----GDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 240 ---vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-----~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
++|+|||++............ .........+...+.+|+.+.. ..++.++||||||+++++++++..++.
T Consensus 150 ~~~~kl~Dfg~~~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 227 (316)
T 2ac3_A 150 VSPVKICDFDLGSGIKLNGDCSPI--STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227 (316)
T ss_dssp SCSEEECCTTCCC---------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCceEEEEccCccccccCCccccc--cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCc
Confidence 999999998754321110000 0001112223333345554322 457889999999999999999764321
Q ss_pred hh----------------------hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 312 DK----------------------EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 312 ~~----------------------~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.. .+ ....++..++++|.+||..+|.+|||+++....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 228 GRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 10 00 013578889999999999999999999877653
No 106
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=5.1e-29 Score=254.82 Aligned_cols=221 Identities=13% Similarity=0.131 Sum_probs=158.8
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|.++.|++
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hpn 85 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL--------------------FAKRAYRELRLLKHMRHEN 85 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHH--------------------HHHHHHHHHHHHHHCCBTT
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHH--------------------HHHHHHHHHHHHHhCCCcC
Confidence 377889999999999999998 5799999998753211110 1124568999999999876
Q ss_pred CCcceeeec----------CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 171 FPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 171 i~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
+ ..+++. ...|+||||+ |++|.+++... . ...++.||+.+|.|||++||+||||||.|||++
T Consensus 86 I--v~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 162 (367)
T 1cm8_A 86 V--IGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN 162 (367)
T ss_dssp B--CCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred C--CCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc
Confidence 3 222221 2359999999 78888875432 1 234788999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
.++.++|+|||++...... ...+.++.++.+|+...+ ..++.++|+||+|+++++++++...+...
T Consensus 163 ~~~~~kl~Dfg~a~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 230 (367)
T 1cm8_A 163 EDCELKILDFGLARQADSE------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230 (367)
T ss_dssp TTCCEEECCCTTCEECCSS------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCEEEEeeecccccccc------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999865322 112233444455665444 67999999999999999999976432100
Q ss_pred -------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.....+.+..+.++|.+||..+|.+|||+++-..
T Consensus 231 ~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 231 HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0001356788899999999999999999987654
No 107
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.96 E-value=3.2e-29 Score=260.91 Aligned_cols=231 Identities=15% Similarity=0.181 Sum_probs=160.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++............ ......+.+|+.+|.+|.|+++
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~--------------~~~~~~~~~E~~~l~~l~hpni 202 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSARE--------------ADPALNVETEIEILKKLNHPCI 202 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC----------------------CCHHHHHHHHHHCCCTTB
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhccccccc--------------chhHHHHHHHHHHHHhCCCCCE
Confidence 67889999999999999998 56899999998643211000000 0001124579999999988763
Q ss_pred C-cceeeecCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC---cEE
Q 012042 172 P-VPNAVDCNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE---KVT 241 (472)
Q Consensus 172 ~-vP~~i~~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g---~vk 241 (472)
. +-..+.....++||||++|++|.+.+... . ...++.||+.+|.|||++||+||||||.|||++.++ .++
T Consensus 203 v~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 203 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp CCCCEEEESSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred eeEEEEEecCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEE
Confidence 2 11222336689999999999998865322 1 224789999999999999999999999999997544 499
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc---cCCCCcchheeccCchhhhhhhccCCcch------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---DGDDGSDIDTDEGSRLSFASISKTAGFLD------ 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---~~~~~~~sDiySlG~~~f~~~t~~~~~l~------ 312 (472)
|+|||+|........ ...+.++..+++|+.+. ...++.++|+||||+++|+++++..++..
T Consensus 283 l~DFG~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~ 352 (419)
T 3i6u_A 283 ITDFGHSKILGETSL----------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 352 (419)
T ss_dssp ECCSSTTTSCC---------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC
T ss_pred EeecccceecCCCcc----------ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH
Confidence 999999975532211 11223343444555442 36788899999999999999997543211
Q ss_pred --hhh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --KEL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --~~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+ ....++..+.++|.+||..+|++||++++...
T Consensus 353 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 353 LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 011 11357888999999999999999999987554
No 108
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=2.5e-29 Score=259.93 Aligned_cols=222 Identities=15% Similarity=0.158 Sum_probs=168.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||+|++......- ...+.+|+.+|.+|.|+++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~----------------------~~~~~~E~~il~~l~hpnI 110 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----------------------KYTVKNEISIMNQLHHPKL 110 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----------------------HHHHHHHHHHHTTCCSTTB
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhh----------------------HHHHHHHHHHHHhCCCcCC
Confidence 77889999999999999998 479999999986432110 1235689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC--CC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD--DE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~--~g 238 (472)
+.+++. ...++||||++|++|.+.+... . ...++.||+.+|.|||++||+||||||.|||++. .+
T Consensus 111 --v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~ 188 (387)
T 1kob_A 111 --INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS 188 (387)
T ss_dssp --CCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCC
T ss_pred --CeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCC
Confidence 444442 5689999999999998876422 1 1248899999999999999999999999999974 46
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||++........ .....++..+++|+.+....++.++||||||+++++++++..++...
T Consensus 189 ~vkL~DFG~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~ 258 (387)
T 1kob_A 189 SVKIIDFGLATKLNPDEI----------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET 258 (387)
T ss_dssp CEEECCCTTCEECCTTSC----------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred ceEEEecccceecCCCcc----------eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH
Confidence 799999999986542211 01112333445666656778999999999999999999986543110
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ ....++.++.++|.+||..+|++|||+++..+.
T Consensus 259 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 259 LQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00 113578899999999999999999999887763
No 109
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.96 E-value=2.9e-29 Score=255.23 Aligned_cols=240 Identities=11% Similarity=0.095 Sum_probs=166.3
Q ss_pred eeeecceecccCceeEEEEEeCC------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARED------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+.+.||+|+||.||+|.+.. ++.||||+.......+... ...+. ........+|+..+..
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e---~~~~~--------~~~~~~~~~e~~~~~~ 104 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTE---LKFYQ--------RAAKPEQIQKWIRTRK 104 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHH---HHHHH--------HHCCHHHHHHHHHHTT
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHH---HHHHH--------hhhhhHHHHHHHHHhh
Confidence 47888999999999999998843 4789999987544322110 00111 0111233456677777
Q ss_pred hhhCCCCcceeeec--------CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 166 LEDHGFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 166 L~~~gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
+.|+++ +.+++. ...+|||||+ |++|.+++... .+ ..++.||+.+|.|||++||+||||||.
T Consensus 105 l~h~~i--v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~ 181 (364)
T 3op5_A 105 LKYLGV--PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKAS 181 (364)
T ss_dssp CSCCCS--CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred ccCCCC--CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHH
Confidence 777653 444442 2369999999 99998876422 12 248899999999999999999999999
Q ss_pred cEEEc--CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccC
Q 012042 231 NIMID--DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 231 NILl~--~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
|||++ .++.++|+|||+|............. ......+.++..+++|+.+.+..++.++||||||+++|+++++..
T Consensus 182 Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~ 259 (364)
T 3op5_A 182 NLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYA--ADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHL 259 (364)
T ss_dssp GEEEESSCTTCEEECCCTTCEESSGGGCCCCSS--CCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HEEEecCCCCeEEEEECCcceecccCCcccccc--cCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 99998 78999999999998764322111100 000111223334445665567779999999999999999999764
Q ss_pred Ccchh------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 309 GFLDK------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 309 ~~l~~------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+.... .+...+++.++..+|..|+..+|++||+.++..+
T Consensus 260 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 260 PWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred CccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 33210 0011577999999999999999999999877644
No 110
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.96 E-value=4.2e-29 Score=245.13 Aligned_cols=221 Identities=13% Similarity=0.157 Sum_probs=160.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|..||||++....... ....+.+|+.+|.++.|+++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~hp~i 82 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---------------------PMEQIEAEIEVLKSLDHPNI 82 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS---------------------CHHHHHHHHHHHHTCCCTTB
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch---------------------hHHHHHHHHHHHHhCCCchH
Confidence 67789999999999999998 569999999986432110 01235689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc------CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc--
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL------QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-- 235 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~------~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-- 235 (472)
+.+++. ...++||||++|++|.+.+.. .. ...++.+|+.+|.+||+.||+||||||.|||++
T Consensus 83 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~ 160 (285)
T 3is5_A 83 --IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT 160 (285)
T ss_dssp --CCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS
T ss_pred --HhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC
Confidence 444443 567999999999998876421 11 235889999999999999999999999999994
Q ss_pred -CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 236 -DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 236 -~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
.++.++|+|||++........ .....+.....+|+. ..+.++.++|+||||+++++++++..+....
T Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~t~~y~aPE~-~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~ 229 (285)
T 3is5_A 161 SPHSPIKIIDFGLAELFKSDEH----------STNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229 (285)
T ss_dssp STTCCEEECCCCCCCC--------------------CTTGGGCCHHH-HTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCCEEEEeeecceecCCccc----------CcCcccccCcCChHH-hccCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence 457899999999975432211 111222333334443 4567899999999999999999975432110
Q ss_pred ---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+.++|.+|+..+|++|||+++-..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 230 LEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0112347889999999999999999999876543
No 111
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.96 E-value=3.2e-29 Score=258.57 Aligned_cols=229 Identities=17% Similarity=0.186 Sum_probs=162.6
Q ss_pred CceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 90 GVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
+..|.+.+.||+|+||.||+|.+.+|+.||||++......... ...+.+|+.+|.+|.++
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~--------------------~~~~~~Ei~~l~~l~~~ 114 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT--------------------LDSYRNEIAYLNKLQQH 114 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHH--------------------HHHHHHHHHHHHHHTTT
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHH--------------------HHHHHHHHHHHHHcccC
Confidence 3458899999999999999999877999999998754321111 12456899999999763
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
.-++..++++ ...||||| +.+++|.+++... . ...++.||+.+|.|||++||+||||||.|||++ ++.
T Consensus 115 ~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~ 192 (390)
T 2zmd_A 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGM 192 (390)
T ss_dssp CTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSC
T ss_pred CCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCe
Confidence 2234444442 56799999 5677888775422 1 234889999999999999999999999999996 588
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-----------CCCCcchheeccCchhhhhhhccC
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-----------GDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-----------~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
++|+|||++.......... ......++.++++|+.+.. ..++.++||||||+++|+++++..
T Consensus 193 ~kl~DFG~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~ 265 (390)
T 2zmd_A 193 LKLIDFGIANQMQPDTTSV-------VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265 (390)
T ss_dssp EEECCCSSSCCC----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEecCccccccCCCccc-------cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCC
Confidence 9999999997653221110 0112233444445554322 468999999999999999999865
Q ss_pred Ccch---h-----hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 309 GFLD---K-----EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 309 ~~l~---~-----~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++.. . .+ .+...+..+.++|.+|+..+|.+||++++...
T Consensus 266 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 266 PFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp TTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 4311 0 00 12234678899999999999999999987765
No 112
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=2.3e-29 Score=256.97 Aligned_cols=221 Identities=14% Similarity=0.089 Sum_probs=163.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~g 170 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++.... . .. .....+.+|..+|..+. |++
T Consensus 22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~--~---------~~--------~~~~~~~~E~~~l~~~~~hp~ 82 (353)
T 2i0e_A 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV--I---------QD--------DDVECTMVEKRVLALPGKPPF 82 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH--H---------HT--------TCHHHHHHHHHHHTCTTCCTT
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--h---------cc--------hHHHHHHHHHHHHHhcCCCCE
Confidence 677899999999999999985 588999999863210 0 00 00123457888888774 332
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
++.++.. +..|+||||++|++|..++.. .. ...++.+|+.+|.|||++||+||||||.|||++.+|.+
T Consensus 83 --iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~v 160 (353)
T 2i0e_A 83 --LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI 160 (353)
T ss_dssp --BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred --EeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcE
Confidence 2333332 678999999999999887542 11 22478999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||+|........ ....+.++..+++|+.+....++.++|+||||+++|+++++..+....
T Consensus 161 kL~DFG~a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~ 231 (353)
T 2i0e_A 161 KIADFGMCKENIWDGV---------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 231 (353)
T ss_dssp EECCCTTCBCCCCTTC---------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEEeCCcccccccCCc---------ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999999975321111 112233444455666666788999999999999999999986543210
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
.+ .+..++.++..+|.+||..+|.+||+..
T Consensus 232 ~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 267 (353)
T 2i0e_A 232 SIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCG 267 (353)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCS
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 11 1356889999999999999999999874
No 113
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.96 E-value=1.8e-29 Score=252.64 Aligned_cols=225 Identities=10% Similarity=0.043 Sum_probs=164.0
Q ss_pred eeeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+.+.||+|+||.||+|.+. +++.||||+++...... ....+.+|+.+|.+
T Consensus 48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~ 106 (343)
T 1luf_A 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD---------------------MQADFQREAALMAE 106 (343)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHH---------------------HHHHHHHHHHHHHT
T ss_pred HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHH---------------------HHHHHHHHHHHHHh
Confidence 3667899999999999999884 34789999986432110 11245689999999
Q ss_pred hhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC--------------------------C----hHHHHHHHH
Q 012042 166 LEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--------------------------N----PDSVFETII 211 (472)
Q Consensus 166 L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--------------------------~----~~~i~~qIl 211 (472)
+.|+++ +.++++ +..++||||++|++|.+++... . ...++.+|+
T Consensus 107 l~hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 184 (343)
T 1luf_A 107 FDNPNI--VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVA 184 (343)
T ss_dssp CCCTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHH
T ss_pred CCCCCE--EEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHH
Confidence 988653 444443 6689999999999998876421 1 123789999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcch
Q 012042 212 GLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDI 291 (472)
Q Consensus 212 ~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~s 291 (472)
.+|.|||++||+||||||.|||++.++.++|+|||++......... ...........+.+|+.+....++.++
T Consensus 185 ~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~ 257 (343)
T 1luf_A 185 AGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------KADGNDAIPIRWMPPESIFYNRYTTES 257 (343)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-------C----CCBCGGGCCHHHHHHCCCCHHH
T ss_pred HHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccc-------cccCCCcccceecChhhhccCCcCccc
Confidence 9999999999999999999999999999999999999754322110 000111112223355544567899999
Q ss_pred heeccCchhhhhhh-ccCCcch---h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 292 DTDEGSRLSFASIS-KTAGFLD---K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 292 DiySlG~~~f~~~t-~~~~~l~---~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
|+||||+++|++++ +..+... . . .....++..+.++|.+|+..+|++|||.++-.
T Consensus 258 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~ 327 (343)
T 1luf_A 258 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIH 327 (343)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 99999999999998 5433211 0 0 12356788999999999999999999987643
No 114
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=3.6e-29 Score=249.49 Aligned_cols=230 Identities=14% Similarity=0.174 Sum_probs=164.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++............ ......+.+|+.+|.++.|+++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~--------------~~~~~~~~~E~~~l~~l~h~~i 77 (322)
T 2ycf_A 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE--------------ADPALNVETEIEILKKLNHPCI 77 (322)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC-----------------------------CHHHHHHHHHHCCCTTB
T ss_pred eeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhccccc--------------chhhhhHHHHHHHHHhCCCCCC
Confidence 77889999999999999998 46899999998643211100000 0001235579999999988763
Q ss_pred Ccceeee---cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc---
Q 012042 172 PVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK--- 239 (472)
Q Consensus 172 ~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~--- 239 (472)
+.+++ ....++||||++|++|.+.+... . ...++.+|+.+|.|||++||+||||||.|||++.++.
T Consensus 78 --~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~ 155 (322)
T 2ycf_A 78 --IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL 155 (322)
T ss_dssp --CCEEEEEESSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCC
T ss_pred --ceEeeEEcCCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCe
Confidence 33333 36689999999999998865322 1 1247889999999999999999999999999986654
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcch----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
++|+|||.+........ ...+.+...+.+|+.+ ....++.++|+||||+++|+++++..+...
T Consensus 156 ~kl~Dfg~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 225 (322)
T 2ycf_A 156 IKITDFGHSKILGETSL----------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225 (322)
T ss_dssp EEECCCTTCEECCCCHH----------HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred EEEccCccceecccccc----------cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence 99999999986542211 1122333333455543 246788999999999999999997543211
Q ss_pred ----hhh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 313 ----KEL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 313 ----~~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
..+ ....++..+.++|.+|+..+|++||++++....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 226 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp SCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 001 124578899999999999999999999887763
No 115
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.96 E-value=3.3e-29 Score=264.70 Aligned_cols=225 Identities=13% Similarity=0.148 Sum_probs=159.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|+.+.|+++
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hpnI 123 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT--------------------HAKRAYRELVLMKCVNHKNI 123 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChH--------------------HHHHHHHHHHHHHhCCCCCC
Confidence 77889999999999999998 5799999999863211110 11245689999999988663
Q ss_pred Ccceeeec----------CCceeEEeecCCCChhhhhccCC---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 172 PVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQN---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 172 ~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
..+++. ...||||||++|..+..+..... ...++.||+.+|.|||++||+||||||.|||++.++
T Consensus 124 --v~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~ 201 (464)
T 3ttj_A 124 --ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 201 (464)
T ss_dssp --CCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred --CcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCC
Confidence 232221 23599999999764433322112 234889999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchhh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDKE---- 314 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~~---- 314 (472)
.++|+|||+|...... .....+.++.++.+|+.+.+..++.++||||+|+++++++++...+....
T Consensus 202 ~~kl~DFG~a~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~ 271 (464)
T 3ttj_A 202 TLKILDFGLARTAGTS----------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271 (464)
T ss_dssp CEEECCCCCC-----C----------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred CEEEEEEEeeeecCCC----------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999754321 11223455556667777677889999999999999999998764321100
Q ss_pred ---h-hc--------------------------cC------C---------------CHHHHHHHHHHHhcCcccCCCCC
Q 012042 315 ---L-AA--------------------------SG------F---------------TRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 315 ---~-~~--------------------------~~------~---------------s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
+ .. .+ | +.++.++|.+||..+|++|||++
T Consensus 272 ~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~ 351 (464)
T 3ttj_A 272 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351 (464)
T ss_dssp HHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHH
Confidence 0 00 00 0 34577999999999999999998
Q ss_pred CCCCCC
Q 012042 344 EGSDDG 349 (472)
Q Consensus 344 e~~~~~ 349 (472)
|-.+--
T Consensus 352 e~L~Hp 357 (464)
T 3ttj_A 352 DALQHP 357 (464)
T ss_dssp HHHTST
T ss_pred HHhcCh
Confidence 877643
No 116
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.96 E-value=1.5e-29 Score=247.30 Aligned_cols=218 Identities=13% Similarity=0.074 Sum_probs=161.3
Q ss_pred eeecceecccCceeEEEEEeC-CC-------CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHH
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DG-------TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMK 164 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g-------~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~ 164 (472)
|.+.+.||+|+||.||+|.+. ++ ..||+|++....... ...+.+|+.+|.
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~----------------------~~~~~~E~~~l~ 67 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY----------------------SESFFEAASMMS 67 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGG----------------------HHHHHHHHHHHH
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHH----------------------HHHHHHHHHHHH
Confidence 677899999999999999884 34 479999885322111 123567999999
Q ss_pred HhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 165 ALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 165 ~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
++.|+++ +.+++. +..++||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||
T Consensus 68 ~l~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIl 145 (289)
T 4fvq_A 68 KLSHKHL--VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNIL 145 (289)
T ss_dssp TSCCTTB--CCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred hCCCCCE--eEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEE
Confidence 9988653 444443 6689999999999999876432 1 1247899999999999999999999999999
Q ss_pred EcCCCc--------EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhh
Q 012042 234 IDDDEK--------VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASI 304 (472)
Q Consensus 234 l~~~g~--------vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~ 304 (472)
++.++. ++|+|||.+....... .+.++....+|+.+.. ..++.++||||||+++++++
T Consensus 146 l~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 212 (289)
T 4fvq_A 146 LIREEDRKTGNPPFIKLSDPGISITVLPKD-------------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212 (289)
T ss_dssp EEECCBGGGTBCCEEEECCCCSCTTTSCHH-------------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHH
T ss_pred EecCCcccccccceeeeccCcccccccCcc-------------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHH
Confidence 998776 9999999986442211 1112222334554444 67899999999999999999
Q ss_pred hccCCcch---h----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 305 SKTAGFLD---K----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 305 t~~~~~l~---~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++...+.. . ......++.++.++|.+|++.+|++|||+++..+
T Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 268 (289)
T 4fvq_A 213 SGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268 (289)
T ss_dssp TTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCCCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 95322211 0 1123557888999999999999999999887654
No 117
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.96 E-value=4.9e-29 Score=255.63 Aligned_cols=226 Identities=15% Similarity=0.060 Sum_probs=165.2
Q ss_pred eeeecceecccCceeEEEEEeC--------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE--------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM 163 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~--------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L 163 (472)
-|.+++.||+|+||.||+|.+. .+..||||+++.....- ....+.+|+.++
T Consensus 70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l 128 (382)
T 3tt0_A 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---------------------DLSDLISEMEMM 128 (382)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHH---------------------HHHHHHHHHHHH
T ss_pred heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHH---------------------HHHHHHHHHHHH
Confidence 3678899999999999999862 23579999986432111 012356899999
Q ss_pred HHh-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC------------------C----hHHHHHHHHHHHHH
Q 012042 164 KAL-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------------------N----PDSVFETIIGLVVR 216 (472)
Q Consensus 164 ~~L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------------------~----~~~i~~qIl~aL~~ 216 (472)
.++ .|++ ++.+++. +..++||||++|++|.+++... . ...++.+|+.+|.+
T Consensus 129 ~~l~~hpn--Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 206 (382)
T 3tt0_A 129 KMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206 (382)
T ss_dssp HHHCCCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCch--hhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 999 6654 3444442 5689999999999998876321 1 12488999999999
Q ss_pred HHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheecc
Q 012042 217 LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 217 LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySl 296 (472)
||+.||+||||||.|||++.++.++|+|||+|.......... .......+....+|+.+....++.++|||||
T Consensus 207 LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~Diwsl 279 (382)
T 3tt0_A 207 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279 (382)
T ss_dssp HHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTC-------CCTTCCCGGGGSCHHHHHSCCCCHHHHHHHH
T ss_pred HHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccc-------cccCCCCCcceeCHHHhcCCCCCchhHHHHH
Confidence 999999999999999999999999999999998654322110 0001111122345555567889999999999
Q ss_pred Cchhhhhhh-ccCCcch-------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 297 SRLSFASIS-KTAGFLD-------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 297 G~~~f~~~t-~~~~~l~-------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|++++++++ +..+... . ......++.++..+|.+|+..+|++|||+++..+
T Consensus 280 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 280 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp HHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999998 5432211 0 0113568899999999999999999999987655
No 118
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96 E-value=4.9e-29 Score=241.63 Aligned_cols=226 Identities=13% Similarity=0.125 Sum_probs=165.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||++......- ....+.+|+.++..+.|+++
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h~~i 67 (276)
T 2yex_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD---------------------CPENIKKEICINKMLNHENV 67 (276)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTT---------------------HHHHHHHHHHHHHTCCCTTB
T ss_pred eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchh---------------------hhHHHHHHHHHHHhcCCCCc
Confidence 677899999999999999984 79999999986332100 01235679999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.||+++.++.++
T Consensus 68 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k 145 (276)
T 2yex_A 68 --VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145 (276)
T ss_dssp --CCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred --eeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEE
Confidence 444443 5678999999999998876532 1 124889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcch-----h--
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLD-----K-- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~-----~-- 313 (472)
|+|||.+........... .....+.....+|+.+.... .+.++|+||||+++++++++..+... .
T Consensus 146 l~dfg~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 218 (276)
T 2yex_A 146 ISDFGLATVFRYNNRERL-------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218 (276)
T ss_dssp ECCCTTCEECEETTEECC-------BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH
T ss_pred EeeCCCccccCCCcchhc-------ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence 999999976532211110 11122333334555444434 47789999999999999997543210 0
Q ss_pred -h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. .....++..+.++|.+|+..+|.+|||+++-.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0 0123578889999999999999999999877653
No 119
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=4.8e-29 Score=246.38 Aligned_cols=220 Identities=15% Similarity=0.187 Sum_probs=165.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++...... ...+.+|+.+|.++.|+++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~~~e~~~l~~l~h~~i 68 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR----------------------DSSLENEIAVLKKIKHENI 68 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------------------------HHHHHHHHHHHCCCTTB
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc----------------------hHHHHHHHHHHHhCCCCCe
Confidence 67789999999999999998 479999999987432110 1134579999999988764
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--C-C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---cCCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--Q-N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI---DDDE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~-~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl---~~~g 238 (472)
+.+++. +..++||||++|++|.+.+.. . . ...++.+|+.+|.+||+.||+||||||.|||+ +.++
T Consensus 69 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~ 146 (304)
T 2jam_A 69 --VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS 146 (304)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTC
T ss_pred --eehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCC
Confidence 444432 567999999999999876532 1 1 23488999999999999999999999999999 6778
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||.+...... ......+.....+|+.+....++.++|+||||+++++++++..+....
T Consensus 147 ~~kl~Dfg~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 215 (304)
T 2jam_A 147 KIMITDFGLSKMEQNG-----------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL 215 (304)
T ss_dssp CEEBCSCSTTCCCCCB-----------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred CEEEccCCcceecCCC-----------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 9999999998643221 111223333445666556778999999999999999999976432110
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++..+.++|.+|+..+|++||++++...
T Consensus 216 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 216 FEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 11457889999999999999999999987665
No 120
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.96 E-value=1.3e-29 Score=249.28 Aligned_cols=224 Identities=12% Similarity=0.002 Sum_probs=163.4
Q ss_pred eeecceecccCceeEEEEE----e-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVA----R-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~----~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|++.+.||+|+||.||+|. + .+|+.||||+++...... ....+.+|+.+|.++.
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~ 81 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN---------------------HIADLKKEIEILRNLY 81 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C---------------------CHHHHHHHHHHHHTCC
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccch---------------------hHHHHHHHHHHHHhCC
Confidence 6788999999999999998 3 468999999986332100 0123568999999998
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
|+++ +.+++. ...++||||++|++|.+++... . ...++.+++.+|.+||++||+||||||.|||+
T Consensus 82 h~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~ 159 (302)
T 4e5w_A 82 HENI--VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 159 (302)
T ss_dssp CTTB--CCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CCCe--eeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE
Confidence 8753 444432 4478999999999999876211 1 12478899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc---
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--- 311 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--- 311 (472)
+.++.++|+|||.+........... ......++.+.++|+.+....++.++|+||||+++++++++..+..
T Consensus 160 ~~~~~~kl~Dfg~~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 233 (302)
T 4e5w_A 160 ESEHQVKIGDFGLTKAIETDKEYYT------VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM 233 (302)
T ss_dssp EETTEEEECCCTTCEECCTTCCEEE------CCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred cCCCCEEECcccccccccCCCccee------ccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh
Confidence 9999999999999987643321110 0111122223445665556778899999999999999998643110
Q ss_pred --------------h-----hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 312 --------------D-----KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 312 --------------~-----~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. .. .....++..+.++|.+|+..+|.+|||+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 293 (302)
T 4e5w_A 234 ALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293 (302)
T ss_dssp HHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred hHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 0 00 0134678899999999999999999998764
No 121
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.96 E-value=4.4e-29 Score=248.35 Aligned_cols=222 Identities=12% Similarity=0.168 Sum_probs=160.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDH 169 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~ 169 (472)
.|.+.+.||+|+||.||+|.+ .+|+.||||++....... ..+.+|+.+|.++ .|+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------~~~~~e~~~l~~l~~h~ 81 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-----------------------EEIKQEINMLKKYSHHR 81 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTT-----------------------HHHHHHHHHHHHHCCST
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccH-----------------------HHHHHHHHHHHhccCCC
Confidence 477889999999999999998 579999999986432211 1345799999999 565
Q ss_pred CCCcceeeec----------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCc
Q 012042 170 GFPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFN 231 (472)
Q Consensus 170 gi~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~N 231 (472)
++ +.+++. +..++||||++|++|.+++... .+ ..++.+|+.+|.+||++||+||||||.|
T Consensus 82 ~i--~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N 159 (326)
T 2x7f_A 82 NI--ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN 159 (326)
T ss_dssp TB--CCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred Ce--eeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHH
Confidence 43 333332 3579999999999998876421 22 2478899999999999999999999999
Q ss_pred EEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhhc
Q 012042 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 232 ILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
||++.++.++|+|||++........ ....+.+.....+|+.+. ...++.++|+||||+++++++++
T Consensus 160 Il~~~~~~~kl~Dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g 230 (326)
T 2x7f_A 160 VLLTENAEVKLVDFGVSAQLDRTVG---------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230 (326)
T ss_dssp EEECTTCCEEECCCTTTC----------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHS
T ss_pred EEEcCCCCEEEeeCcCceecCcCcc---------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhC
Confidence 9999999999999999875532211 111122333334555433 46788999999999999999997
Q ss_pred cCCcchh---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 307 TAGFLDK---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 307 ~~~~l~~---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+.... ......++..+.++|.+|+..+|.+||++++...
T Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 231 APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 6432110 0113467899999999999999999999987665
No 122
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.96 E-value=5.9e-30 Score=267.96 Aligned_cols=219 Identities=14% Similarity=0.123 Sum_probs=156.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++....... .....+.+|+.+|..+.|+++
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~h~~i 210 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-------------------DEVAHTLTENRVLQNSRHPFL 210 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------------------------CCCCCSCTTS
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhh-------------------HHHHHHHHHHHHHHhCCCCeE
Confidence 77889999999999999998 5799999999863210000 001123468888888887653
Q ss_pred Ccceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAE-HGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~-~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++. .+..||||||++|++|...+... . ...++.||+.+|.|||+ +|||||||||.||||+.++.+
T Consensus 211 --v~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 211 --TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp --CCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCE
T ss_pred --eeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCE
Confidence 33333 26689999999999998765321 1 22478899999999998 999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||+|....... .....+.++..+++|+.+....++.++|+||||+++++++++..+....
T Consensus 289 kl~DFG~a~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~ 359 (446)
T 4ejn_A 289 KITDFGLCKEGIKDG---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 359 (446)
T ss_dssp EECCCCCCCTTCC--------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEccCCCceeccCCC---------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence 999999997432211 1112234444445666656788999999999999999999976543110
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGS 341 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s 341 (472)
.+ .+..++.++.++|.+||..+|.+||+
T Consensus 360 ~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 393 (446)
T 4ejn_A 360 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLG 393 (446)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred HHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCC
Confidence 01 13468889999999999999999993
No 123
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=3.1e-29 Score=243.77 Aligned_cols=226 Identities=15% Similarity=0.176 Sum_probs=167.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ .+..+.+|+.+|.++.|+++
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 67 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--------------------EKQMLVSEVNLLRELKHPNI 67 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHH--------------------HHHHHHHHHHHHHhcCCCCC
Confidence 67789999999999999998 4799999999875432111 11245689999999988764
Q ss_pred Ccceeee------cCCceeEEeecCCCChhhhhcc-------CC---hHHHHHHHHHHHHHHHHCC-----ceeccCCCC
Q 012042 172 PVPNAVD------CNRHCVIMSLVQGYPLVQVNQL-------QN---PDSVFETIIGLVVRLAEHG-----LIHCDFNEF 230 (472)
Q Consensus 172 ~vP~~i~------~~~~~LVMEyi~G~~L~~l~~~-------~~---~~~i~~qIl~aL~~LH~~G-----IIHrDLKP~ 230 (472)
+.+++ ....++||||++|++|.+++.. .. ...++.+|+.+|.+||+.| |+||||||.
T Consensus 68 --~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~ 145 (279)
T 2w5a_A 68 --VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145 (279)
T ss_dssp --CCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGG
T ss_pred --CeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchh
Confidence 44443 1457999999999999887532 11 1248899999999999999 999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
|||++.++.++|+|||++........ ....+.+.....+|+.+....++.++|+||||+++++++++..+.
T Consensus 146 NIl~~~~~~~kl~dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 216 (279)
T 2w5a_A 146 NVFLDGKQNVKLGDFGLARILNHDTS---------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216 (279)
T ss_dssp GEEECSSSCEEECCCCHHHHC---CH---------HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred hEEEcCCCCEEEecCchheeeccccc---------cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999875432211 111223333444566556678899999999999999999976432
Q ss_pred ch---h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 311 LD---K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 311 l~---~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.. . . .....++.++.++|.+|+..+|++|||.++..+.-
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 217 TAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 11 0 0 12346789999999999999999999999887654
No 124
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.96 E-value=3.5e-29 Score=247.02 Aligned_cols=225 Identities=13% Similarity=0.066 Sum_probs=164.5
Q ss_pred eeeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+++.||+|+||.||+|.+ .+++.||||+++.....- ....+.+|+.+|.+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~ 82 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT---------------------EREALMSELKVLSY 82 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH---------------------HHHHHHHHHHHHHH
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHH---------------------HHHHHHHHHHHHhh
Confidence 367889999999999999985 357889999986432110 11245689999999
Q ss_pred h-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC--------------------Ch----HHHHHHHHHHHHH
Q 012042 166 L-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--------------------NP----DSVFETIIGLVVR 216 (472)
Q Consensus 166 L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--------------------~~----~~i~~qIl~aL~~ 216 (472)
| .|+++ +.+++. +..++||||++|++|.+++... .+ ..++.+|+.+|.+
T Consensus 83 l~~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 160 (313)
T 1t46_A 83 LGNHMNI--VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160 (313)
T ss_dssp HCCCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCe--eeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 9 66653 444442 6689999999999998875321 11 2478899999999
Q ss_pred HHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheecc
Q 012042 217 LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 217 LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySl 296 (472)
||++||+||||||.|||++.++.++|+|||.+........... ......+....+|+.+....++.++|||||
T Consensus 161 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 233 (313)
T 1t46_A 161 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV-------KGNARLPVKWMAPESIFNCVYTFESDVWSY 233 (313)
T ss_dssp HHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEE-------CSSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred HHHCCeecCCCccceEEEcCCCCEEEcccccccccccccccee-------ccCCCCcceeeChHHhcCCCCChHHHHHHH
Confidence 9999999999999999999999999999999976543221100 001111122335554556789999999999
Q ss_pred Cchhhhhhh-ccCCcch----h-----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 297 SRLSFASIS-KTAGFLD----K-----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 297 G~~~f~~~t-~~~~~l~----~-----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
|++++++++ +..+... . ......++..+.++|.+|+..+|.+|||+++..
T Consensus 234 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 234 GIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299 (313)
T ss_dssp HHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 999999998 5432210 0 011355788999999999999999999987654
No 125
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.96 E-value=5.8e-29 Score=243.82 Aligned_cols=225 Identities=13% Similarity=0.056 Sum_probs=166.1
Q ss_pred CCceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 89 RGVFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 89 ~~~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
.+..|.+...||+|+||.||+|.+ .++..||+|++........ ....+.+|+.+|.++.
T Consensus 24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~ 83 (290)
T 1t4h_A 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--------------------ERQRFKEEAEMLKGLQ 83 (290)
T ss_dssp TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHH--------------------HHHHHHHHHHHHTTCC
T ss_pred CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHH--------------------HHHHHHHHHHHHHhCC
Confidence 345678889999999999999998 5689999999863321111 1224568999999998
Q ss_pred hCCCCcceeeec--------CCceeEEeecCCCChhhhhcc--C-C---hHHHHHHHHHHHHHHHHCC--ceeccCCCCc
Q 012042 168 DHGFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQL--Q-N---PDSVFETIIGLVVRLAEHG--LIHCDFNEFN 231 (472)
Q Consensus 168 ~~gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~--~-~---~~~i~~qIl~aL~~LH~~G--IIHrDLKP~N 231 (472)
|+++ +.+++. ...++||||++|++|..++.. . . ...++.+|+.+|.|||+.| |+||||||.|
T Consensus 84 h~~i--v~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~N 161 (290)
T 1t4h_A 84 HPNI--VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN 161 (290)
T ss_dssp CTTB--CCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGG
T ss_pred CCCe--eeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHH
Confidence 8753 444432 337899999999999887642 1 1 2247899999999999999 9999999999
Q ss_pred EEEc-CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 232 IMID-DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 232 ILl~-~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
||++ .++.++|+|||.+.....+.. ..+.+.....+|+ ...+.++.++|+||||+++++++++..+.
T Consensus 162 il~~~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~t~~y~aPE-~~~~~~~~~~Di~slG~~l~~l~~g~~pf 229 (290)
T 1t4h_A 162 IFITGPTGSVKIGDLGLATLKRASFA-----------KAVIGTPEFMAPE-MYEEKYDESVDVYAFGMCMLEMATSEYPY 229 (290)
T ss_dssp EEESSTTSCEEECCTTGGGGCCTTSB-----------EESCSSCCCCCGG-GGGTCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred EEEECCCCCEEEeeCCCccccccccc-----------ccccCCcCcCCHH-HHhccCCCcchHHHHHHHHHHHHhCCCCC
Confidence 9997 788999999999864322211 1112333334454 44567999999999999999999975432
Q ss_pred ch----------------hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 LD----------------KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 l~----------------~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. .......++.++.++|.+|+..+|.+|||+++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 230 SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 01123456788999999999999999999887554
No 126
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.96 E-value=7.4e-29 Score=243.55 Aligned_cols=227 Identities=15% Similarity=0.125 Sum_probs=169.3
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+. +++.||+|++......- ...+..+.+|+.++..+.|++
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-------------------~~~~~~~~~e~~~l~~l~h~~ 76 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-------------------PHQREKMSMEISIHRSLAHQH 76 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-------------------HHHHHHHHHHHHHHHTCCCTT
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC-------------------HHHHHHHHHHHHHHHhCCCCC
Confidence 4778899999999999999994 68999999986321100 001224567999999998765
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +.++++ +..++||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++.++.+
T Consensus 77 i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~ 154 (294)
T 2rku_A 77 V--VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 154 (294)
T ss_dssp B--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCE
T ss_pred E--eeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCE
Confidence 3 444442 5579999999999998875321 1 23488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||.+......... .....+.....+|+.+....++.++|+||||+++++++++.......
T Consensus 155 kl~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 225 (294)
T 2rku_A 155 KIGDFGLATKVEYDGER---------KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 225 (294)
T ss_dssp EECCCTTCEECCSTTCC---------BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred EEEeccCceecccCccc---------cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999865422111 01122333334555556677899999999999999999976432110
Q ss_pred h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. .....++..+.++|.+|+..+|++|||+++..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 226 RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 1235678889999999999999999999988764
No 127
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.96 E-value=1.8e-29 Score=265.22 Aligned_cols=220 Identities=15% Similarity=0.137 Sum_probs=164.9
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|.+.++..||||+++...... ..+.+|+.+|.+|.|+++
T Consensus 190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~h~~i- 245 (454)
T 1qcf_A 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-----------------------EAFLAEANVMKTLQHDKL- 245 (454)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCH-----------------------HHHHHHHHHHTTCCCTTB-
T ss_pred eEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccH-----------------------HHHHHHHHHHhhCCCCCE-
Confidence 56789999999999999999878899999987543211 235679999999988763
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhcc----CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQL----QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~----~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..+++ ....+|||||++|++|.+++.. ..+ ..++.||+.+|.|||++||+||||||.|||++.++.+|
T Consensus 246 -v~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~k 324 (454)
T 1qcf_A 246 -VKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK 324 (454)
T ss_dssp -CCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEE
T ss_pred -eeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEE
Confidence 33333 3678999999999999987642 111 24788999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h---
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K--- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~--- 313 (472)
|+|||++....... +..+ .....+.. ++|+.+....++.++||||||++++++++ +..+... .
T Consensus 325 l~DFG~a~~~~~~~---~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~ 395 (454)
T 1qcf_A 325 IADFGLARVIEDNE---YTAR------EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395 (454)
T ss_dssp ECSTTGGGGBCCHH---HHTT------CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EeeCCCceEcCCCc---eecc------CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999997543211 0000 00111222 35554456789999999999999999998 6533211 0
Q ss_pred -hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+ .+..++..+.++|.+|+..+|++|||.++..
T Consensus 396 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~ 436 (454)
T 1qcf_A 396 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 436 (454)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 00 1346788999999999999999999987654
No 128
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=254.14 Aligned_cols=231 Identities=13% Similarity=0.130 Sum_probs=167.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.....-.. +..... ...+.+|+.+|.++.|+++
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~------~~~~~~--------~~~~~~E~~~l~~l~h~~I 91 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC------WIEDPK--------LGKVTLEIAILSRVEHANI 91 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTS------EEEETT--------TEEEEHHHHHHTTCCCTTB
T ss_pred eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhccccc------ccchHH--------HHHHHHHHHHHHhCCCCCE
Confidence 77889999999999999998 57999999998754211000 000000 0012369999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCC-ChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGY-PLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~-~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.++++ +..++||||+.++ +|..++... . ...++.+|+.+|.|||+.||+||||||.|||++.++.+
T Consensus 92 --v~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~ 169 (335)
T 3dls_A 92 --IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTI 169 (335)
T ss_dssp --CCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred --eeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcE
Confidence 444442 5678999998755 888876432 1 22488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCC-CcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDD-GSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~-~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||++........ ...+.++..+++|+.+....+ +.++||||||+++|+++++..++...
T Consensus 170 kL~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 239 (335)
T 3dls_A 170 KLIDFGSAAYLERGKL----------FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA 239 (335)
T ss_dssp EECCCTTCEECCTTCC----------BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTT
T ss_pred EEeecccceECCCCCc----------eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhh
Confidence 9999999986543211 111233334445555555554 88999999999999999986543211
Q ss_pred -hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
...+..++.++.++|.+|+..+|++|||+++....-
T Consensus 240 ~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 240 AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 112345789999999999999999999998876643
No 129
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=257.97 Aligned_cols=225 Identities=13% Similarity=0.012 Sum_probs=162.6
Q ss_pred eeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|.+.+.||+|+||.||+|.. .+++.||||+++....... ...+.+|+.+|.++
T Consensus 73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------~~~~~~E~~~l~~l 131 (367)
T 3l9p_A 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD---------------------ELDFLMEALIISKF 131 (367)
T ss_dssp EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHH---------------------HHHHHHHHHHHHHC
T ss_pred eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhh---------------------HHHHHHHHHHHHhC
Confidence 67789999999999999984 2567899999863221111 11345799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---------C----hHHHHHHHHHHHHHHHHCCceeccCCC
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---------N----PDSVFETIIGLVVRLAEHGLIHCDFNE 229 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---------~----~~~i~~qIl~aL~~LH~~GIIHrDLKP 229 (472)
.|+++ +.+++. ...++||||++|++|..++... . ...++.+|+.+|.|||++||+||||||
T Consensus 132 ~hpnI--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp 209 (367)
T 3l9p_A 132 NHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 209 (367)
T ss_dssp CCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred CCCCC--CeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 88653 444442 5679999999999998875321 1 124889999999999999999999999
Q ss_pred CcEEEcCCC---cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-
Q 012042 230 FNIMIDDDE---KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS- 305 (472)
Q Consensus 230 ~NILl~~~g---~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t- 305 (472)
.|||++.++ .++|+|||+|......... .......++..+++|+.+....++.++||||||++++++++
T Consensus 210 ~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~ 282 (367)
T 3l9p_A 210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 282 (367)
T ss_dssp GGEEESCSSTTCCEEECCCHHHHHHHHHSSC-------TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred hhEEEecCCCCceEEECCCcccccccccccc-------ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 999998554 4999999999744221110 00111122223345555567889999999999999999998
Q ss_pred ccCCcch---h-----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 306 KTAGFLD---K-----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 306 ~~~~~l~---~-----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+..+... . ......++..+.++|.+|++.+|++|||.++-.+
T Consensus 283 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~ 338 (367)
T 3l9p_A 283 GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 338 (367)
T ss_dssp SCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 5432211 0 0113467888999999999999999999887655
No 130
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.96 E-value=3.1e-29 Score=242.73 Aligned_cols=221 Identities=13% Similarity=0.065 Sum_probs=155.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+. |+.||||+++........ .....+.+|+.++..+.|+++
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~------------------~~~~~~~~e~~~l~~l~h~~i- 68 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDIS------------------QTIENVRQEAKLFAMLKHPNI- 68 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------------------------CHHHHHHHHHHHHHCCCTTB-
T ss_pred eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHH------------------HHHHHHHHHHHHHHhcCCCCE-
Confidence 567899999999999999875 889999998643211100 011245689999999988754
Q ss_pred cceeeec----CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCC---ceeccCCCCcEEEcC----
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHG---LIHCDFNEFNIMIDD---- 236 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~G---IIHrDLKP~NILl~~---- 236 (472)
+.+++. +..++||||++|++|..++... . ...++.+++.+|.+||+.| |+||||||.|||++.
T Consensus 69 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 69 -IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp -CCEEEEECCC--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred -eeEEEEEecCCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc
Confidence 444442 5689999999999998876432 1 2247899999999999999 999999999999985
Q ss_pred ----CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch
Q 012042 237 ----DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD 312 (472)
Q Consensus 237 ----~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~ 312 (472)
++.++|+|||.+......... ...+.....+|+.+....++.++|+||||+++++++++..+...
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTKM-----------SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp SCCSSCCEEECCCCC------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred ccccCcceEEccCCccccccccccc-----------CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 677999999999754322110 11223333455555567789999999999999999997643211
Q ss_pred h---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 K---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ~---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. ......++..+.++|.+|+..+|.+|||+++-
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 264 (271)
T 3dtc_A 217 IDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNI 264 (271)
T ss_dssp SCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 0 01135678899999999999999999998764
No 131
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=1.5e-29 Score=252.03 Aligned_cols=232 Identities=14% Similarity=0.074 Sum_probs=166.6
Q ss_pred HHHhCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHH
Q 012042 85 TLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMK 164 (472)
Q Consensus 85 ~l~~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~ 164 (472)
.+....--|.+.+.||+|+||.||+|...+|+.||||+++....... ...+.+|+.+|.
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---------------------~~~~~~e~~~l~ 82 (326)
T 3uim_A 24 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG---------------------ELQFQTEVEMIS 82 (326)
T ss_dssp HHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C---------------------CCHHHHHHHGGG
T ss_pred HHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH---------------------HHHHHHHHHHHH
Confidence 33444445778899999999999999887899999999864321100 012457999999
Q ss_pred HhhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC------C----hHHHHHHHHHHHHHHHHC---CceeccC
Q 012042 165 ALEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ------N----PDSVFETIIGLVVRLAEH---GLIHCDF 227 (472)
Q Consensus 165 ~L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~------~----~~~i~~qIl~aL~~LH~~---GIIHrDL 227 (472)
++.|+++ +.++++ +..++||||++|++|..++... . ...++.+++.+|.|||++ ||+||||
T Consensus 83 ~l~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dl 160 (326)
T 3uim_A 83 MAVHRNL--LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDV 160 (326)
T ss_dssp TCCCTTB--CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCC
T ss_pred hccCCCc--cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCC
Confidence 9987653 333332 5679999999999998876422 1 135889999999999999 9999999
Q ss_pred CCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhcc
Q 012042 228 NEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 228 KP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~ 307 (472)
||.|||++.++.++|+|||++......... ....+.++..+.+|+.+....++.++||||||+++++++++.
T Consensus 161 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 232 (326)
T 3uim_A 161 KAANILLDEEFEAVVGDFGLAKLMDYKDTH--------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232 (326)
T ss_dssp SGGGEEECTTCCEEECCCSSCEECCSSSSC--------EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCC
T ss_pred chhhEEECCCCCEEeccCccccccCccccc--------ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCC
Confidence 999999999999999999999865432111 011122333334555555677899999999999999999976
Q ss_pred CCcchhh------------------------hh--------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 308 AGFLDKE------------------------LA--------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 308 ~~~l~~~------------------------~~--------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+.-... +. ....+..+.++|.+|+..+|.+|||+++-.+
T Consensus 233 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 304 (326)
T 3uim_A 233 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304 (326)
T ss_dssp CSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred CcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHH
Confidence 4331000 00 0111256778999999999999999987654
No 132
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=253.70 Aligned_cols=224 Identities=13% Similarity=0.116 Sum_probs=159.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++........ ..+.+|+.+|.++.|+++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---------------------~~~~~E~~~l~~l~h~~i 62 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP---------------------CTAIREVSLLKDLKHANI 62 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------C---------------------CCCCCCHHHHSCCCCTTB
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccc---------------------hhHHHHHHHHHhcCCCCC
Confidence 677899999999999999984 7999999998643211100 011258999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. +..++||||++| +|.+++... . ...++.+|+.+|.|||+.||+||||||.|||++.++.+
T Consensus 63 --v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~ 139 (324)
T 3mtl_A 63 --VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGEL 139 (324)
T ss_dssp --CCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCE
T ss_pred --CeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCE
Confidence 444442 668999999986 665554221 1 22478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
+|+|||++.....+.. ......++..+.+|+.+.+ ..++.++||||||+++++++++..++...
T Consensus 140 kl~Dfg~a~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (324)
T 3mtl_A 140 KLADFGLARAKSIPTK---------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210 (324)
T ss_dssp EECSSSEEECC---------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEccCcccccccCCcc---------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999999975432211 1111222333445554443 66899999999999999999976432100
Q ss_pred -------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 -------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 -------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
......++..+.++|.+||..+|.+|||+++...-.
T Consensus 211 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 211 HFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp HHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred HHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 001135678889999999999999999999887744
No 133
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.96 E-value=3.9e-29 Score=244.36 Aligned_cols=224 Identities=13% Similarity=0.083 Sum_probs=163.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++.......... .. .....+.+|+.++.++.|+++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-----~~----------~~~~~~~~E~~~l~~l~h~~i 85 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE-----MI----------EKFQEFQREVFIMSNLNHPNI 85 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHH-----HH----------CCSHHHHHHHHHHTTCCCTTB
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchh-----HH----------HHHHHHHHHHHHHHhCCCCCc
Confidence 67789999999999999998 579999999986432211100 00 000245689999999987653
Q ss_pred Ccceeeec--CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEcCCCc-
Q 012042 172 PVPNAVDC--NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHG--LIHCDFNEFNIMIDDDEK- 239 (472)
Q Consensus 172 ~vP~~i~~--~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~G--IIHrDLKP~NILl~~~g~- 239 (472)
+.+++. ...++||||++|++|.+.+... . ...++.+++.+|.|||++| |+||||||.|||++.++.
T Consensus 86 --~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~ 163 (287)
T 4f0f_A 86 --VKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDEN 163 (287)
T ss_dssp --CCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTT
T ss_pred --hhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCC
Confidence 444443 5668999999999997764221 1 1248899999999999999 999999999999987776
Q ss_pred ----EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc--ccCCCCcchheeccCchhhhhhhccCCcch-
Q 012042 240 ----VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET--TDGDDGSDIDTDEGSRLSFASISKTAGFLD- 312 (472)
Q Consensus 240 ----vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~--~~~~~~~~sDiySlG~~~f~~~t~~~~~l~- 312 (472)
++|+|||.+....... ..+.+.....+|+.+ ....++.++|+||||+++++++++..+...
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~~------------~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 164 APVCAKVADFGLSQQSVHSV------------SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp CSCCEEECCCTTCBCCSSCE------------ECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CceeEEeCCCCccccccccc------------cccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999997443221 112233333455544 245678999999999999999997643211
Q ss_pred ----h------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 ----K------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ----~------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
. ......++..+.++|.+|+..+|++|||+++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 280 (287)
T 4f0f_A 232 SYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280 (287)
T ss_dssp CCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 0 01235678899999999999999999998764
No 134
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.96 E-value=6.9e-29 Score=245.57 Aligned_cols=224 Identities=14% Similarity=0.166 Sum_probs=158.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.....-. .....+.+|+.+|.++.|+++
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~h~~i 94 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA-------------------KARADCIKEIDLLKQLNHPNV 94 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCH-------------------HHHHHHHHHHHHHHTCCCTTB
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCH-------------------HHHHHHHHHHHHHHhCCCCCE
Confidence 77889999999999999998 5799999999864221100 011245679999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+++. +..++||||++|++|.+++.. ..+ ..++.+|+.+|.+||+.||+||||||.|||++.+
T Consensus 95 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~ 172 (310)
T 2wqm_A 95 --IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT 172 (310)
T ss_dssp --CCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred --eeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCC
Confidence 444432 678999999999999887531 111 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----- 312 (472)
+.++|+|||++........ ....+.+.....+|+.+....++.++|+||||+++++++++..+...
T Consensus 173 ~~~kl~Dfg~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 243 (310)
T 2wqm_A 173 GVVKLGDLGLGRFFSSKTT---------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 243 (310)
T ss_dssp SCEEECCC---------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH
T ss_pred CCEEEEeccceeeecCCCc---------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH
Confidence 9999999999875432211 11122333344566655677899999999999999999997643211
Q ss_pred ----hhh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 ----KEL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ----~~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+ ....++.++..+|.+|+..+|.+|||.++-.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il 289 (310)
T 2wqm_A 244 YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVY 289 (310)
T ss_dssp HHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 001 1246788999999999999999999987643
No 135
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.96 E-value=2.8e-29 Score=250.86 Aligned_cols=225 Identities=13% Similarity=0.030 Sum_probs=165.9
Q ss_pred eeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|.+.+.||+|+||.||+|.. .+++.||||+++...... ...+.+|+.+|.++.
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~l~ 82 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ----------------------QRDFQREIQILKALH 82 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHH----------------------HHHHHHHHHHHHTCC
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHH----------------------HHHHHHHHHHHHhcC
Confidence 67789999999999999983 468899999986432111 123568999999998
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhcc----CCh---HHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQL----QNP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~----~~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
|+++ +.+++. ...++||||++|++|.+++.. ... ..++.+|+.+|.+||+.||+||||||.|||+
T Consensus 83 h~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~ 160 (327)
T 3lxl_A 83 SDFI--VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 160 (327)
T ss_dssp CTTB--CCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CCce--eEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE
Confidence 8764 333321 347899999999999887642 111 2478899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
+.++.++|+|||.+............ .....++.+.++|+.+....++.++||||||+++++++++..+....
T Consensus 161 ~~~~~~kl~Dfg~~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~ 234 (327)
T 3lxl_A 161 ESEAHVKIADFGLAKLLPLDKDYYVV------REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234 (327)
T ss_dssp EETTEEEECCGGGCEECCTTCSEEEC------SSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred CCCCCEEEcccccceecccCCcccee------eccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcccc
Confidence 99999999999999866432211100 01112222334555555677899999999999999999864322100
Q ss_pred ----------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+.++|.+|+..+|++|||+++..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 235 AEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0012467889999999999999999999988754
No 136
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.8e-29 Score=252.62 Aligned_cols=229 Identities=14% Similarity=0.101 Sum_probs=161.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++......... .....+.+|+.+|.++.|++
T Consensus 11 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~-----------------~~~~~~~~E~~~l~~l~h~~ 73 (346)
T 1ua2_A 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKD-----------------GINRTALREIKLLQELSHPN 73 (346)
T ss_dssp --CEEEEEEEETTEEEEEEECSSCCSEEEEEEC-----------------------------CTHHHHHHHHHHHCCCTT
T ss_pred ccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhh-----------------hhhHHHHHHHHHHhhCCCCC
Confidence 367789999999999999998 469999999986432111000 00013457999999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +.+++. +..++||||++| +|...+... ....++.+|+.+|.|||++||+||||||.|||++.++.
T Consensus 74 i--v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 150 (346)
T 1ua2_A 74 I--IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV 150 (346)
T ss_dssp B--CCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred C--CeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCC
Confidence 3 444442 678999999997 666554321 12458999999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcch---h--
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLD---K-- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~---~-- 313 (472)
++|+|||++.....+... .....++..+.+|+.+.+ ..++.++||||||+++++++++...... .
T Consensus 151 ~kl~Dfg~a~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~ 221 (346)
T 1ua2_A 151 LKLADFGLAKSFGSPNRA---------YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ 221 (346)
T ss_dssp EEECCCGGGSTTTSCCCC---------CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEEEecccceeccCCccc---------CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999999765432211 111223334445554433 4589999999999999999987532110 0
Q ss_pred --hh----------------------------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 --EL----------------------------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 --~~----------------------------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.+ ....++..+.++|.+|+..+|++|||+++-....
T Consensus 222 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 222 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred HHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00 0134568899999999999999999998876643
No 137
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=3.8e-29 Score=248.53 Aligned_cols=224 Identities=15% Similarity=0.152 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||++......-. .....+.+|+.++.++.|+++
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~hp~i 96 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDP-------------------VFRTRMQREARTAGRLQEPHV 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSH-------------------HHHHHHHHHHHHHTTCCCTTB
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCH-------------------HHHHHHHHHHHHHhhcCCCCe
Confidence 677899999999999999984 789999999863211100 012245689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.++++ +..++||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++.++.++
T Consensus 97 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~k 174 (309)
T 2h34_A 97 --VPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAY 174 (309)
T ss_dssp --CCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred --eEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEE
Confidence 444432 6689999999999998876421 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD--------- 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~--------- 312 (472)
|+|||++........ .......+.....+|+.+....++.++|+||||+++++++++..+...
T Consensus 175 l~Dfg~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 246 (309)
T 2h34_A 175 LVDFGIASATTDEKL--------TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH 246 (309)
T ss_dssp ECSCCC------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHH
T ss_pred EecCccCcccccccc--------ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHH
Confidence 999999875532211 111122333334466655677889999999999999999997643211
Q ss_pred -------hhhhccCCCHHHHHHHHHHHhcCcccCC-CCCCC
Q 012042 313 -------KELAASGFTRKDQDVIQKFIGGSIEESG-SDDEG 345 (472)
Q Consensus 313 -------~~~~~~~~s~~~~~~l~k~l~~~p~~R~-s~~e~ 345 (472)
......+++..+.++|.+|+..+|++|| ++++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l 287 (309)
T 2h34_A 247 INQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDL 287 (309)
T ss_dssp HHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred hccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHH
Confidence 0112356888999999999999999999 55443
No 138
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=7.5e-29 Score=243.65 Aligned_cols=228 Identities=14% Similarity=0.013 Sum_probs=162.8
Q ss_pred ceeeecceecccCceeEEEEEeCC----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 91 VFTAVGRQLGVGKESDIFEVARED----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~~~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
..|.+.+.||+|+||.||+|.+.+ +..||||.+...... . ....+.+|+.+|.++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~-~--------------------~~~~~~~E~~~l~~l 83 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-G--------------------EVSQFLTEGIIMKDF 83 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSH-H--------------------HHHHHHHHHHHHHTC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCH-H--------------------HHHHHHHHHHHHHhC
Confidence 468889999999999999998732 235899987532211 0 012356799999999
Q ss_pred hhCCCCcceeeec-----CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 167 EDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 167 ~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
.|+++ ..+++. +..++||||++|++|.+++... .. ..++.+++.+|.+||++||+||||||.|||+
T Consensus 84 ~h~~i--v~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~ 161 (298)
T 3f66_A 84 SHPNV--LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 161 (298)
T ss_dssp CCTTB--CCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCCCE--eeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE
Confidence 88764 333332 4679999999999999876431 11 2477899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc---
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL--- 311 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l--- 311 (472)
+.++.++|+|||.+.....+.... .........+...++|+.+....++.++|+||||+++++++++...+.
T Consensus 162 ~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~ 236 (298)
T 3f66_A 162 DEKFTVKVADFGLARDMYDKEYYS-----VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236 (298)
T ss_dssp CTTCCEEECSCGGGCCCSCGGGCB-----C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred CCCCCEEECcccccccccccchhc-----cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 999999999999998654322111 011111122222345555556789999999999999999999432211
Q ss_pred ---hh---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 312 ---DK---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 312 ---~~---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+. ...+..++..+.++|.+|+..+|++|||+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell 283 (298)
T 3f66_A 237 NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 283 (298)
T ss_dssp CTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 00 112345788899999999999999999987654
No 139
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.96 E-value=6.9e-29 Score=245.66 Aligned_cols=222 Identities=12% Similarity=0.139 Sum_probs=164.3
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.+.||+|+||.||+|.+. +|+.||||++..... . ..+.+|+.+|.++.|++
T Consensus 30 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~-----------------------~~~~~e~~~l~~l~h~~ 85 (314)
T 3com_A 30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-L-----------------------QEIIKEISIMQQCDSPH 85 (314)
T ss_dssp CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-C-----------------------HHHHHHHHHHHTCCCTT
T ss_pred hhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-H-----------------------HHHHHHHHHHHhCCCCC
Confidence 4778899999999999999984 699999999864321 1 12457999999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc---CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +.+++. +..++||||++|++|.+++.. .. ...++.+|+.+|.+||+.||+||||||.||+++.++.
T Consensus 86 i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~ 163 (314)
T 3com_A 86 V--VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH 163 (314)
T ss_dssp B--CCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred C--ccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCC
Confidence 3 444442 567999999999999887531 11 1348899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
++|+|||.+......... ...+.+.....+|+......++.++|+||||+++++++++..+....
T Consensus 164 ~kl~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 234 (314)
T 3com_A 164 AKLADFGVAGQLTDTMAK---------RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI 234 (314)
T ss_dssp EEECCCTTCEECBTTBSC---------BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred EEEeecccchhhhhhccc---------cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 999999999765432110 11122333334555556677899999999999999999976432110
Q ss_pred -hh---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -EL---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -~~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+ ....++..+.++|.+|+..+|.+|||+++..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 235 FMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00 123468889999999999999999999888763
No 140
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.96 E-value=6.6e-29 Score=249.77 Aligned_cols=232 Identities=16% Similarity=0.157 Sum_probs=164.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++...... ....+.+|+.+|.++.|+++
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i 71 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---------------------FALRTLREIKILKHFKHENI 71 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHH---------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccch---------------------HHHHHHHHHHHHHhCcCCCc
Confidence 67789999999999999998 479999999986432111 01234579999999988764
Q ss_pred Ccceeeec---------CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+++. ...++||||++| +|.+++... . ...++.||+.+|.+||++||+||||||.|||++.+
T Consensus 72 --v~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~ 148 (353)
T 2b9h_A 72 --ITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN 148 (353)
T ss_dssp --CCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred --CCeeeeecccccCccceEEEEEeccCc-cHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCC
Confidence 444432 457999999985 677664322 1 23488999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhh-ccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYF-DRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l-~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
+.++|+|||++............ .........+.+.....+|+.+ ....++.++|+||||+++++++++.......
T Consensus 149 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 228 (353)
T 2b9h_A 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228 (353)
T ss_dssp CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 99999999999876532211100 0000111223334344455544 3478999999999999999999875432100
Q ss_pred -------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++.++.++|.+||..+|++|||+++..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00113678899999999999999999999887663
No 141
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.96 E-value=6.9e-29 Score=249.68 Aligned_cols=228 Identities=15% Similarity=0.123 Sum_probs=170.1
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+. +++.||+|++......- ...+..+.+|+.++..+.|++
T Consensus 42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-------------------~~~~~~~~~E~~~l~~l~h~~ 102 (335)
T 2owb_A 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-------------------PHQREKMSMEISIHRSLAHQH 102 (335)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-------------------HHHHHHHHHHHHHHHTCCCTT
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC-------------------HHHHHHHHHHHHHHHhCCCCC
Confidence 4778899999999999999994 68999999986321100 001224567999999998865
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +.++++ +..++||||++|++|.+++... . ...++.+|+.+|.|||++||+||||||.|||++.++.+
T Consensus 103 i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~ 180 (335)
T 2owb_A 103 V--VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV 180 (335)
T ss_dssp B--CCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCE
T ss_pred C--CeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCE
Confidence 3 444442 5679999999999998875321 1 23488999999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||++......... ...+.+...+.+|+.+....++.++|+||||+++++++++.......
T Consensus 181 kl~Dfg~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 251 (335)
T 2owb_A 181 KIGDFGLATKVEYDGER---------KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251 (335)
T ss_dssp EECCCTTCEECCSTTCC---------BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred EEeeccCceecccCccc---------ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH
Confidence 99999999865422110 11122333344555555677899999999999999999976432110
Q ss_pred h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
. .....++..+..+|.+|+..+|++|||.++..+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 252 RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp HHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred HHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 0 11346788899999999999999999999887743
No 142
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.96 E-value=9.9e-29 Score=251.28 Aligned_cols=227 Identities=11% Similarity=0.065 Sum_probs=165.7
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+++.||||++....... ....+.+|+.+|.++.|++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~n 86 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT---------------------YCQRTLREIKILLRFRHEN 86 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHH---------------------HHHHHHHHHHHHHHCCCTT
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcH---------------------HHHHHHHHHHHHHhcCCCC
Confidence 378889999999999999998 478899999986322110 0123568999999998876
Q ss_pred CCcceeeec---------CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ +.+++. ...|+||||++| +|.+++... . ...++.||+.+|.|||++||+||||||.|||++.
T Consensus 87 i--v~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~ 163 (364)
T 3qyz_A 87 I--IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 163 (364)
T ss_dssp B--CCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred C--ccceeEEecCCccccceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC
Confidence 3 333221 357999999986 676654322 1 2248899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-ccCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-TDGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||.+.......... .....+.++..+.+|+.+ ....++.++||||||+++++++++.......
T Consensus 164 ~~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 237 (364)
T 3qyz_A 164 TCDLKICDFGLARVADPDHDHT------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237 (364)
T ss_dssp TCCEEECCCTTCEECCGGGCBC------CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred CCCEEEEeCcceEecCCCCCcc------ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence 9999999999998654221110 111223344444455544 3456899999999999999999976432100
Q ss_pred ------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.....+++.++.++|.+||..+|++|||+++-..-
T Consensus 238 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp GGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00114578889999999999999999999887663
No 143
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=2.6e-29 Score=258.50 Aligned_cols=223 Identities=10% Similarity=0.083 Sum_probs=158.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHH-HHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAF-MKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~-L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++.....-.. ......+|..+ +..+.|++
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~-------------------~~~~~~~e~~~ll~~~~hp~ 100 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK-------------------EEKHIMSERNVLLKNVKHPF 100 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------------------------CCBCCCCCTT
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhH-------------------HHHHHHHHHHHHHHhCCCCC
Confidence 67789999999999999998 46899999998633211000 00112345444 34455543
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+ +.++. .+..|+||||++|++|..++... . ...++.+|+.+|.|||++||+||||||.|||++.+|.+
T Consensus 101 I--v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~i 178 (373)
T 2r5t_A 101 L--VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHI 178 (373)
T ss_dssp B--CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCE
T ss_pred C--CCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCE
Confidence 2 33332 26689999999999998875321 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------h
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------K 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~ 313 (472)
+|+|||+++....... ....+.++..+++|+.+....++.++|+||||+++|+++++..++.. .
T Consensus 179 kL~DFG~a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~ 249 (373)
T 2r5t_A 179 VLTDFGLCKENIEHNS---------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD 249 (373)
T ss_dssp EECCCCBCGGGBCCCC---------CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHH
T ss_pred EEeeCccccccccCCC---------ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999999974321111 11233444455566666678899999999999999999998654311 0
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ ....++..++.+|.+||..+|.+||++.++
T Consensus 250 ~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~ 287 (373)
T 2r5t_A 250 NILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDD 287 (373)
T ss_dssp HHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTT
T ss_pred HHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCC
Confidence 11 135688999999999999999999999743
No 144
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.96 E-value=5.1e-29 Score=242.71 Aligned_cols=227 Identities=18% Similarity=0.213 Sum_probs=166.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||++......... . ......+.+|+.+|.++.|+++
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------~-----~~~~~~~~~E~~~l~~l~h~~i 70 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR-----------R-----GVSREEIEREVNILREIRHPNI 70 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------S-----SBCHHHHHHHHHHHHHCCCTTB
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc-----------c-----chHHHHHHHHHHHHHhCCCCCe
Confidence 678899999999999999995 7999999998643211100 0 0012245689999999988763
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC---
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE--- 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g--- 238 (472)
+.+++. ...++||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.||+++.++
T Consensus 71 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~ 148 (283)
T 3bhy_A 71 --ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN 148 (283)
T ss_dssp --CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSS
T ss_pred --eehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCC
Confidence 444442 5689999999999998876321 1 235889999999999999999999999999998776
Q ss_pred -cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h-
Q 012042 239 -KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K- 313 (472)
Q Consensus 239 -~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~- 313 (472)
.++|+|||.+........ .....+.....+|+.+....++.++|+||||+++++++++..+... .
T Consensus 149 ~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 218 (283)
T 3bhy_A 149 PRIKLIDFGIAHKIEAGNE----------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218 (283)
T ss_dssp CCEEECCCTTCEECC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred CceEEEecccceeccCCCc----------ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH
Confidence 799999999986543211 1112233334455555667889999999999999999997543211 0
Q ss_pred -------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+.++|.+|+..+|++|||+++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 219 TLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0112467888999999999999999999876543
No 145
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=1.1e-28 Score=265.92 Aligned_cols=224 Identities=15% Similarity=0.141 Sum_probs=168.4
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++... ... .. ....+.+|..+|.++.|++
T Consensus 186 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~--~~~----------~~-------~~~~~~~E~~iL~~l~hp~ 246 (543)
T 3c4z_A 186 WFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR--LKK----------RK-------GYQGAMVEKKILAKVHSRF 246 (543)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHH--HHH----------TT-------CHHHHHHHHHHHHHCCCTT
T ss_pred heEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHH--hhh----------hH-------HHHHHHHHHHHHHhcCCCC
Confidence 367789999999999999998 479999999985221 000 00 0123567999999998765
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhccC------Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ------NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~------~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
+ +.++. ....|+||||++|++|..++... .+ ..++.||+.+|.|||++||+||||||.|||++.
T Consensus 247 I--v~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~ 324 (543)
T 3c4z_A 247 I--VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD 324 (543)
T ss_dssp B--CCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred E--eeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeC
Confidence 3 33332 25689999999999998765321 12 236889999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch----
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
+|.++|+|||+++....... ....+.++..+++|+.+.+..++.++|+||||+++|+++++..++..
T Consensus 325 ~g~vkL~DFGla~~~~~~~~---------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~ 395 (543)
T 3c4z_A 325 DGNVRISDLGLAVELKAGQT---------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395 (543)
T ss_dssp TSCEEECCCTTCEECCTTCC---------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC
T ss_pred CCCEEEeecceeeeccCCCc---------ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc
Confidence 99999999999986543211 11123444555567766677899999999999999999998654311
Q ss_pred -------hhh------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 -------KEL------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 -------~~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
..+ .+..++..++.+|.+||..+|++||+..+.
T Consensus 396 ~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~ 441 (543)
T 3c4z_A 396 VENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441 (543)
T ss_dssp CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTT
T ss_pred hhHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCccc
Confidence 011 135688999999999999999999998653
No 146
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.96 E-value=1.5e-29 Score=248.37 Aligned_cols=220 Identities=11% Similarity=0.079 Sum_probs=153.1
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH--hhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA--LEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~--L~~~g 170 (472)
|.+.+.||+|+||.||+|.+ +|+.||||++.... . ....+|.+++.. +.|++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~-----------------------~~~~~e~~~~~~~~l~h~n 63 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--E-----------------------KSWFRETELYNTVMLRHEN 63 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--H-----------------------HHHHHHHHHHHHTCCCCTT
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--c-----------------------hhhHHHHHHHHHhhccCcC
Confidence 56789999999999999987 68899999985321 0 012345666655 66654
Q ss_pred CCcceeeec--------CCceeEEeecCCCChhhhhccCC-----hHHHHHHHHHHHHHHH--------HCCceeccCCC
Q 012042 171 FPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQN-----PDSVFETIIGLVVRLA--------EHGLIHCDFNE 229 (472)
Q Consensus 171 i~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~~-----~~~i~~qIl~aL~~LH--------~~GIIHrDLKP 229 (472)
+ ..+++. ...++||||++|++|.+++.... ...++.+|+.+|.||| ++||+||||||
T Consensus 64 i--v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp 141 (301)
T 3q4u_A 64 I--LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS 141 (301)
T ss_dssp B--CCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCG
T ss_pred e--eeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCCh
Confidence 3 333332 34689999999999999875331 1248899999999999 99999999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC------CCCcchheeccCchhhhh
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG------DDGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~------~~~~~sDiySlG~~~f~~ 303 (472)
.|||++.++.++|+|||+|.....+...... ......++..+.+|+.+... .++.++||||||++++++
T Consensus 142 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el 216 (301)
T 3q4u_A 142 KNILVKKNGQCCIADLGLAVMHSQSTNQLDV-----GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216 (301)
T ss_dssp GGEEECTTSCEEECCCTTCEEEETTTTEEEC-----CCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HhEEEcCCCCEEEeeCCCeeecccccccccc-----cccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHH
Confidence 9999999999999999999765432221100 01112233333455544333 455799999999999999
Q ss_pred hhc----------cCCcchh-----------h-h----h---------ccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 304 ISK----------TAGFLDK-----------E-L----A---------ASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 304 ~t~----------~~~~l~~-----------~-~----~---------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
+++ ..+.... . . . ....+..+.++|.+|++.+|++|||+++-
T Consensus 217 ~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 293 (301)
T 3q4u_A 217 ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293 (301)
T ss_dssp HTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred HhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence 987 2221100 0 0 0 01133568899999999999999998753
No 147
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.96 E-value=5.6e-29 Score=247.85 Aligned_cols=223 Identities=10% Similarity=0.055 Sum_probs=160.3
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+. ..+|||+++........ ...+.+|+.+|.++.|+++
T Consensus 38 ~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i- 94 (307)
T 3lb7_A 38 VMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQ--------------------FQAFRNEVAVLRKTRHVNI- 94 (307)
T ss_dssp CCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHH--------------------HHHHHHHHHHHTTCCCTTB-
T ss_pred eEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHH--------------------HHHHHHHHHHHHhCCCCCE-
Confidence 567899999999999999764 46999988753322111 1245689999999988753
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
+.+++ .+..++||||++|++|.+++... . ...++.+|+.+|.|||+.||+||||||.|||++.++.++|
T Consensus 95 -v~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 173 (307)
T 3lb7_A 95 -LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp -CCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEE
T ss_pred -EEEEEEEccCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEE
Confidence 34444 26689999999999998876421 1 1248899999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccc---cCCCCcchheeccCchhhhhhhccCCcch-----h-
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---DGDDGSDIDTDEGSRLSFASISKTAGFLD-----K- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~- 313 (472)
+|||+|.......... ......+...+.+|+.+. ...++.++||||||+++++++++..+... .
T Consensus 174 ~DFg~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~ 246 (307)
T 3lb7_A 174 GDFGLATVKSRWSGSQ-------QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246 (307)
T ss_dssp CCCCSSCC-------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH
T ss_pred ccCCCceecccccccc-------cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH
Confidence 9999997543211110 111122333334555432 56789999999999999999997643211 0
Q ss_pred -------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.++|.+|+..+|++||+..+-.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il 292 (307)
T 3lb7_A 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292 (307)
T ss_dssp HHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHH
T ss_pred HHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHH
Confidence 001245688999999999999999999987643
No 148
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=5.8e-29 Score=251.21 Aligned_cols=240 Identities=10% Similarity=0.073 Sum_probs=164.7
Q ss_pred eeeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+.+.||+|+||.||+|.+. ++..||||+.......+..- ...+. ......+.+|+..+..+.
T Consensus 38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e---~~~~~--------~~~~~~~~~e~~~~~~l~ 106 (345)
T 2v62_A 38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSE---LKFYQ--------RVAKKDCIKKWIERKQLD 106 (345)
T ss_dssp EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHH---HHHHH--------HHCCHHHHHHHHHHHTCS
T ss_pred eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHH---HHHHH--------HHhhhHHHHHHHhhcccc
Confidence 4778899999999999999984 67889999987554322210 00110 111224557889999998
Q ss_pred hCCCCcceeeec--------CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 168 DHGFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 168 ~~gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
|+++ +.+++. ...||||||+ |++|.+++... . ...++.||+.+|.|||++||+||||||.|||
T Consensus 107 h~ni--~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl 183 (345)
T 2v62_A 107 YLGI--PLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLL 183 (345)
T ss_dssp CCCC--CCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred ccCc--ceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEE
Confidence 8764 444442 4579999999 99999876432 1 2348899999999999999999999999999
Q ss_pred EcCCC--cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 234 IDDDE--KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 234 l~~~g--~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
++.++ .++|+|||+|+............ ......+.+...+++|+.+.+..++.++||||||+++|+++++..+..
T Consensus 184 l~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 261 (345)
T 2v62_A 184 LGYKNPDQVYLADYGLSYRYCPNGNHKQYQ--ENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE 261 (345)
T ss_dssp EESSSTTSEEECCCTTCEESSGGGCCCCCC--CCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTG
T ss_pred EccCCCCcEEEEeCCCceecccccccccch--hccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 99777 99999999998765322111110 011112233334445665566779999999999999999999764431
Q ss_pred h----h------------hhh--------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 D----K------------ELA--------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ~----~------------~~~--------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. . .+. ...++.++.++|.+|+..+|++|||.++-.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 262 QNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp GGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred ccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 1 0 000 0178889999999999999999999987755
No 149
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.96 E-value=5.1e-29 Score=253.25 Aligned_cols=220 Identities=13% Similarity=0.179 Sum_probs=163.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......... ....+.+|+.+|.++.|+++
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~-------------------~~~~~~~E~~~l~~l~hpni 116 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-------------------KWQDIIKEVRFLQKLRHPNT 116 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHH-------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchH-------------------HHHHHHHHHHHHHhCCCCCE
Confidence 67789999999999999998 57999999998643211110 11235689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhc---cCC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQ---LQN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~---~~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
..++++ +..+|||||+.| +|.+++. ... ...++.+++.+|.|||++||+||||||.|||++.++.+
T Consensus 117 --v~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 193 (348)
T 1u5q_A 117 --IQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 193 (348)
T ss_dssp --CCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEE
T ss_pred --eeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCE
Confidence 333332 668999999986 4544432 111 23488899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhcccccccccccc---ccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+|+|||++....... .+.+...+++|+.+ ..+.++.++||||||+++++++++..+....
T Consensus 194 kL~DfG~a~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 260 (348)
T 1u5q_A 194 KLGDFGSASIMAPAN-------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 260 (348)
T ss_dssp EECCCTTCBSSSSBC-------------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred EEeeccCceecCCCC-------------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 999999997543211 12233334455544 2577899999999999999999986542110
Q ss_pred -----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++..+.++|.+|+..+|++|||+++...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 261 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 0123467889999999999999999999988765
No 150
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.96 E-value=2.8e-29 Score=245.39 Aligned_cols=223 Identities=13% Similarity=0.138 Sum_probs=166.5
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||++.... .... .....+.+|+.++.++.|+++
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~-----------------~~~~~~~~e~~~l~~l~h~~i 76 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKE-----------------GVEHQLRREIEIQSHLRHPNI 76 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH--HHHT-----------------TCHHHHHHHHHHHHTCCCTTB
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc--cchH-----------------HHHHHHHHHHHHHhcCCCCCE
Confidence 677899999999999999984 68899999985321 0000 011245689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+.+... . ...++.+|+.+|.+||++||+||||||.||+++.++.++
T Consensus 77 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k 154 (284)
T 2vgo_A 77 --LRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELK 154 (284)
T ss_dssp --CCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEE
T ss_pred --eeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEE
Confidence 444442 5689999999999998865321 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------hh
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KE 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~ 314 (472)
|+|||.+........ ..+.+.....+|+.+....++.++|+||||+++++++++..+... ..
T Consensus 155 l~Dfg~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 223 (284)
T 2vgo_A 155 IADFGWSVHAPSLRR-----------RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223 (284)
T ss_dssp ECCCTTCEECSSSCB-----------CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred EecccccccCccccc-----------ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH
Confidence 999999875532211 111223333455555667789999999999999999997643211 00
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+ ....++..+.++|.+|+..+|.+||++++-.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 224 IVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1 12557889999999999999999999987655
No 151
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.96 E-value=6.8e-29 Score=259.40 Aligned_cols=180 Identities=17% Similarity=0.265 Sum_probs=135.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC-
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG- 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g- 170 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++.... + ...+.+|+.+|..+.+..
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~-~----------------------~~~~~~E~~~l~~l~~~~~ 155 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR-F----------------------HRQAAEEIRILEHLRKQDK 155 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH-H----------------------HHHHHHHHHHHHHHHTTCT
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccc-h----------------------HHHHHHHHHHHHHHhhccc
Confidence 78899999999999999998 4689999999864311 1 113457899999987642
Q ss_pred CCcceee---ec----CCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 171 FPVPNAV---DC----NRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 171 i~vP~~i---~~----~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
..+|+++ .. +..++||||+.| +|.+++... . ...++.||+.+|.|||++|||||||||.||||+
T Consensus 156 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~ 234 (429)
T 3kvw_A 156 DNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK 234 (429)
T ss_dssp TSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEES
T ss_pred cCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc
Confidence 2334433 32 567999999975 666654321 1 235889999999999999999999999999999
Q ss_pred CCCc--EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccC
Q 012042 236 DDEK--VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 236 ~~g~--vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
.++. ++|+|||+|...... ...+.++.++++|+.+....++.++||||||+++++++++..
T Consensus 235 ~~~~~~vkL~DFG~a~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~ 297 (429)
T 3kvw_A 235 QQGRSGIKVIDFGSSCYEHQR------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297 (429)
T ss_dssp STTSCCEEECCCTTCEETTCC------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cCCCcceEEeecccceecCCc------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCC
Confidence 8877 999999999754321 112334445556666667789999999999999999999754
No 152
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.96 E-value=4.7e-29 Score=264.85 Aligned_cols=224 Identities=14% Similarity=0.141 Sum_probs=167.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+++.||+|+||.||+|.+ .+|+.||||+++... .... .....+.+|+.+|+.+.|+++
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~--~~~~-----------------~~~~~~~~Ei~~l~~l~HpnI 78 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK--IRSL-----------------DVVGKIRREIQNLKLFRHPHI 78 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH--HHHT-----------------TTHHHHHHHHHHHTTCCCTTB
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh--ccCH-----------------HHHHHHHHHHHHHHhCCCCCC
Confidence 67889999999999999998 479999999986321 1000 001245689999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+++++. +..||||||++|++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 79 --v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vk 156 (476)
T 2y94_A 79 --IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK 156 (476)
T ss_dssp --CCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEE
T ss_pred --CcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeE
Confidence 444442 6689999999999998876432 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||++....... ......+...+.+|+.+.+.. .+.++||||+|+++|+++++..++...
T Consensus 157 L~DFG~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~ 226 (476)
T 2y94_A 157 IADFGLSNMMSDGE----------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK 226 (476)
T ss_dssp ECCCSSCEECCTTC----------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH
T ss_pred EEeccchhhccccc----------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence 99999998654221 111223333444555544444 478999999999999999976433210
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ .+..++.++.++|.+|+..+|.+|||+++-.+
T Consensus 227 ~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 227 KICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11 12457889999999999999999999987655
No 153
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=5.9e-29 Score=248.13 Aligned_cols=225 Identities=12% Similarity=0.009 Sum_probs=164.7
Q ss_pred eeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
+.+.+.||+|+||.||+|.. .+|+.||||+++.....- ....+.+|+.+|.+|.
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~ 91 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQ---------------------HRSGWKQEIDILRTLY 91 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHH---------------------HHHHHHHHHHHHHHCC
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChH---------------------HHHHHHHHHHHHHhCC
Confidence 57789999999999988854 268899999986432110 1123568999999999
Q ss_pred hCCCCcceeeec------CCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 168 DHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 168 ~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
|+++ +.++++ ...++||||++|++|.+++... . ...++.+|+.+|.+||+.||+||||||.|||++.
T Consensus 92 h~~i--v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~ 169 (318)
T 3lxp_A 92 HEHI--IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN 169 (318)
T ss_dssp CTTB--CCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred Ccch--hhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcC
Confidence 8653 444432 3468999999999999876532 1 1247899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
++.++|+|||.+............ .....++.+.++|+.+....++.++||||||+++++++++..+....
T Consensus 170 ~~~~kl~Dfg~a~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~ 243 (318)
T 3lxp_A 170 DRLVKIGDFGLAKAVPEGHEYYRV------REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 243 (318)
T ss_dssp TCCEEECCGGGCEECCTTCSEEEC---------CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH
T ss_pred CCCEEECCcccccccccccccccc------ccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh
Confidence 999999999999876432211100 11112222344566555677889999999999999999964321100
Q ss_pred --------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 --------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 --------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.++|.+|+..+|++|||+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 302 (318)
T 3lxp_A 244 FLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302 (318)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred hhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 001346888999999999999999999987654
No 154
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.96 E-value=2.3e-29 Score=252.47 Aligned_cols=223 Identities=13% Similarity=0.094 Sum_probs=156.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.....-. ....+.+|+.+|.++.|+++
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 95 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG--------------------VPGTAIREVSLLKELQHRNI 95 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------------------------CHHHHHHGGGCCCTTB
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccc--------------------cchhHHHHHHHHHHcCCCCc
Confidence 77889999999999999998 5799999999864321110 01123479999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-----C
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-----D 236 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-----~ 236 (472)
+.+++. +..+|||||++| +|.+++... . ...++.||+.+|.|||++||+||||||.|||++ .
T Consensus 96 --v~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 172 (329)
T 3gbz_A 96 --IELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASE 172 (329)
T ss_dssp --CCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----
T ss_pred --ceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCc
Confidence 344332 668999999996 777765322 1 234889999999999999999999999999995 4
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
.+.++|+|||++.....+.. ......++..+.+|+.+.. ..++.++||||||+++++++++...+...
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 243 (329)
T 3gbz_A 173 TPVLKIGDFGLARAFGIPIR---------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243 (329)
T ss_dssp CCEEEECCTTHHHHHC--------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cceEEECcCCCccccCCccc---------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence 44599999999975432211 1112223333445555444 45899999999999999999975432100
Q ss_pred -----h------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----E------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----~------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++.++.++|.+||..+|++|||+++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 244 IDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 001126788899999999999999999987655
No 155
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.96 E-value=5.8e-29 Score=243.19 Aligned_cols=230 Identities=15% Similarity=0.161 Sum_probs=159.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++..... ...+.+|+.+|.++.|+++
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------------------~~~~~~E~~~l~~l~h~~i 64 (303)
T 1zy4_A 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-----------------------LSTILSEVMLLASLNHQYV 64 (303)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHH-----------------------HHHHHHHHHHHTTCCCTTB
T ss_pred chhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHH-----------------------HHHHHHHHHHHHhcCchHH
Confidence 67789999999999999998 57999999998532110 1235579999999988653
Q ss_pred Ccceeee-----------------cCCceeEEeecCCCChhhhhccCC----h---HHHHHHHHHHHHHHHHCCceeccC
Q 012042 172 PVPNAVD-----------------CNRHCVIMSLVQGYPLVQVNQLQN----P---DSVFETIIGLVVRLAEHGLIHCDF 227 (472)
Q Consensus 172 ~vP~~i~-----------------~~~~~LVMEyi~G~~L~~l~~~~~----~---~~i~~qIl~aL~~LH~~GIIHrDL 227 (472)
...++ .+..++||||++|++|.+++.... . ..++.+|+.+|.+||++||+||||
T Consensus 65 --~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl 142 (303)
T 1zy4_A 65 --VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDL 142 (303)
T ss_dssp --CCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred --HHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence 23222 245789999999999998764221 1 247889999999999999999999
Q ss_pred CCCcEEEcCCCcEEEEeCCCceecCcccchhh-----hccccchhhhhcccccccccccccc-CCCCcchheeccCchhh
Q 012042 228 NEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMY-----FDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSF 301 (472)
Q Consensus 228 KP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~-----l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f 301 (472)
||.|||++.++.++|+|||.+........... +...........+.....+|+.+.. ..++.++|+||||++++
T Consensus 143 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 222 (303)
T 1zy4_A 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222 (303)
T ss_dssp CGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHH
T ss_pred CHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHH
Confidence 99999999999999999999976542211000 0000111122233333445554433 47899999999999999
Q ss_pred hhhhccCCcchh-----hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 302 ASISKTAGFLDK-----EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 302 ~~~t~~~~~l~~-----~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
++++......+. .+ .....+..++++|.+|+..+|.+|||+++..+
T Consensus 223 ~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 223 EMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 998732211110 00 12334566899999999999999999987655
No 156
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=2.5e-29 Score=257.84 Aligned_cols=226 Identities=11% Similarity=0.052 Sum_probs=156.7
Q ss_pred eeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.+.+.||+|+||.||+|.+. ++..||||+++...... .+..+.+|+.+|.++.|
T Consensus 47 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h 105 (373)
T 2qol_A 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK---------------------QRRDFLGEASIMGQFDH 105 (373)
T ss_dssp CCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHH---------------------HHHHHHHHHHHHTTCCC
T ss_pred ceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHH---------------------HHHHHHHHHHHHHhCCC
Confidence 567899999999999999874 47789999986432111 11235689999999988
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+++ +.++++ +..+|||||++|++|.+++... . ...++.+|+.+|.|||+.||+||||||.|||++.+
T Consensus 106 ~ni--v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 183 (373)
T 2qol_A 106 PNI--IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183 (373)
T ss_dssp TTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred CCC--CeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCC
Confidence 753 444443 5689999999999999876432 1 12478999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcchh---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLDK--- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~~--- 313 (472)
+.++|+|||++............ ......+..+++|+.+....++.++||||||++++++++ +..+....
T Consensus 184 ~~~kl~Dfg~a~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~ 257 (373)
T 2qol_A 184 LVCKVSDFGLGRVLEDDPEAAYT------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257 (373)
T ss_dssp CCEEECCC----------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH
T ss_pred CCEEECcCccccccccCCcccee------ccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999765422111000 000011112335555556789999999999999999887 54332110
Q ss_pred ----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++..+.++|.+|++.+|++||+.++-.+
T Consensus 258 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 0 012457788999999999999999999877644
No 157
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=2.7e-29 Score=254.21 Aligned_cols=221 Identities=17% Similarity=0.128 Sum_probs=166.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||+|+++.....- ....+.+|+.+|.++.|+++
T Consensus 35 y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h~~i 93 (360)
T 3eqc_A 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---------------------IRNQIIRELQVLHECNSPYI 93 (360)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHH---------------------HHHHHHHHHGGGGGCCCTTB
T ss_pred ceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHH---------------------HHHHHHHHHHHHHHCCCCCE
Confidence 67789999999999999999 479999999987432111 11245689999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEH-GLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~-GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. +..+|||||++|++|.+++.. .. ...++.+++.+|.|||+. ||+||||||.|||++.++.+
T Consensus 94 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~ 171 (360)
T 3eqc_A 94 --VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 171 (360)
T ss_dssp --CCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCE
T ss_pred --EEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCE
Confidence 444442 568999999999999887642 11 235888999999999985 99999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-------
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
+|+|||++....... ...+.+...+.+|+.+....++.++||||||+++++++++..+....
T Consensus 172 kl~Dfg~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 240 (360)
T 3eqc_A 172 KLCDFGVSGQLIDSM-----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 240 (360)
T ss_dssp EECCCCCCHHHHHHC---------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHH
T ss_pred EEEECCCCccccccc-----------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999986432111 11223344445666556778999999999999999999976432100
Q ss_pred --------------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 314 --------------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 314 --------------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
......++.++.++|.+|+..+|++|||++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 320 (360)
T 3eqc_A 241 MFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320 (360)
T ss_dssp HHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred HhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHH
Confidence 001124688899999999999999999998
Q ss_pred CCCC
Q 012042 344 EGSD 347 (472)
Q Consensus 344 e~~~ 347 (472)
+..+
T Consensus 321 ell~ 324 (360)
T 3eqc_A 321 QLMV 324 (360)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 8766
No 158
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.96 E-value=5.3e-29 Score=259.64 Aligned_cols=228 Identities=14% Similarity=0.126 Sum_probs=166.2
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
--|.+.+.||+|+||.||+|.+ .+|+.||||+++... . ...... ..+.+|..+|..+.|+
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~--~---------~~~~~~--------~~~~~E~~il~~l~hp 129 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE--M---------IKRSDS--------AFFWEERDIMAFANSP 129 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--H---------HHTCCC--------STHHHHHHHHHHCCCT
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh--h---------hhhHHH--------HHHHHHHHHHHhCCCC
Confidence 3478889999999999999998 469999999985210 0 000000 1234789999999876
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC-Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
++ ..++.. ...||||||++|++|..++... .+ ..++.+|+.+|.|||++|||||||||.|||++.+|.+
T Consensus 130 ~I--v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~i 207 (410)
T 3v8s_A 130 WV--VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 207 (410)
T ss_dssp TB--CCEEEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred CC--CeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCE
Confidence 53 333332 5689999999999998876432 22 2478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC----CCcchheeccCchhhhhhhccCCcch----
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD----DGSDIDTDEGSRLSFASISKTAGFLD---- 312 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~----~~~~sDiySlG~~~f~~~t~~~~~l~---- 312 (472)
+|+|||+|+....... .....+.++..+++|+.+.... ++.++|+||||+++|+++++..++..
T Consensus 208 kL~DFG~a~~~~~~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 279 (410)
T 3v8s_A 208 KLADFGTCMKMNKEGM--------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279 (410)
T ss_dssp EECCCTTCEECCTTSE--------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred EEeccceeEeeccCCc--------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh
Confidence 9999999986543211 0111234444445666543333 78999999999999999998654321
Q ss_pred ---hhh-------h---ccCCCHHHHHHHHHHHhcCccc--CCCCCCCCC
Q 012042 313 ---KEL-------A---ASGFTRKDQDVIQKFIGGSIEE--SGSDDEGSD 347 (472)
Q Consensus 313 ---~~~-------~---~~~~s~~~~~~l~k~l~~~p~~--R~s~~e~~~ 347 (472)
..+ . ...++.+.+++|.+||..+|.+ |+++++-..
T Consensus 280 ~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 280 GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 011 1 1358899999999999988887 888876654
No 159
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=5.8e-29 Score=244.32 Aligned_cols=223 Identities=11% Similarity=0.103 Sum_probs=156.5
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+. ..||||+++........ ...+.+|+.+|.++.|+++
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i- 82 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQ--------------------LQAFKNEVGVLRKTRHVNI- 82 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHH--------------------HHHHHHHHHHHTTCCCTTB-
T ss_pred eeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHH--------------------HHHHHHHHHHHHhCCCCcE-
Confidence 677899999999999999764 36999998754322211 1235689999999988654
Q ss_pred cceeeec---CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
..++++ ...++||||++|++|.+.+... . ...++.+|+.+|.+||+.||+||||||.|||++.++.++|
T Consensus 83 -v~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl 161 (289)
T 3og7_A 83 -LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 161 (289)
T ss_dssp -CCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred -EEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEE
Confidence 344433 5679999999999998876322 1 1248899999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccc---cCCCCcchheeccCchhhhhhhccCCcch-----h-
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---DGDDGSDIDTDEGSRLSFASISKTAGFLD-----K- 313 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---~~~~~~~sDiySlG~~~f~~~t~~~~~l~-----~- 313 (472)
+|||.+.......... ......+...+.+|+.+. ...++.++||||||+++++++++..+... .
T Consensus 162 ~Dfg~~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 234 (289)
T 3og7_A 162 GDFGLATEKSRWSGSH-------QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234 (289)
T ss_dssp CCCC-------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH
T ss_pred ccceeccccccccccc-------cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH
Confidence 9999997543211111 111122333334555443 56788899999999999999997543211 0
Q ss_pred -------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 -------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 -------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.++|.+|+..+|.+|||.++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell 280 (289)
T 3og7_A 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280 (289)
T ss_dssp HHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 001236778999999999999999999987643
No 160
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.96 E-value=1e-28 Score=247.70 Aligned_cols=226 Identities=12% Similarity=0.055 Sum_probs=163.6
Q ss_pred eeeecceecccCceeEEEEEeC--------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE--------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFM 163 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~--------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L 163 (472)
-|.+++.||+|+||.||+|.+. ++..||||+++...... ....+.+|+.+|
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l 94 (334)
T 2pvf_A 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---------------------DLSDLVSEMEMM 94 (334)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH---------------------HHHHHHHHHHHH
T ss_pred HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH---------------------HHHHHHHHHHHH
Confidence 3677899999999999999863 46789999986432110 012356799999
Q ss_pred HHh-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccCC------------------h----HHHHHHHHHHHHH
Q 012042 164 KAL-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN------------------P----DSVFETIIGLVVR 216 (472)
Q Consensus 164 ~~L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~------------------~----~~i~~qIl~aL~~ 216 (472)
.++ .|+++ +.+++. +..++||||++|++|.+++.... + ..++.+|+.+|.|
T Consensus 95 ~~l~~hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 172 (334)
T 2pvf_A 95 KMIGKHKNI--INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172 (334)
T ss_dssp HHHCCCTTB--CCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCE--eeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 999 66543 444442 56899999999999988764211 1 2478899999999
Q ss_pred HHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheecc
Q 012042 217 LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 217 LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySl 296 (472)
||+.||+||||||.|||++.++.++|+|||++.......... .......+...++|+.+....++.++|||||
T Consensus 173 LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 245 (334)
T 2pvf_A 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245 (334)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEE-------CCSCCCCCGGGCCHHHHHHCEECHHHHHHHH
T ss_pred HHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccccc-------ccCCCCcccceeChHHhcCCCcChHHHHHHH
Confidence 999999999999999999999999999999998654321100 0000111112335554456778999999999
Q ss_pred Cchhhhhhh-ccCCcchh--------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 297 SRLSFASIS-KTAGFLDK--------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 297 G~~~f~~~t-~~~~~l~~--------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|++++++++ +..+.... ......++..+..+|.+|+..+|.+||++++..+
T Consensus 246 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 246 GVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp HHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999998 54322110 0123567889999999999999999999887654
No 161
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.96 E-value=2.1e-29 Score=258.13 Aligned_cols=222 Identities=14% Similarity=0.095 Sum_probs=162.1
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.+.+.||+|+||.||+|.+. +|+.||||+++....... ...+.+|+.+|.++.|+++
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---------------------~~~~~~E~~~l~~l~hpni 174 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---------------------KAKFLQEARILKQYSHPNI 174 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHH---------------------HTTTTHHHHHHTTCCCTTB
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHH---------------------HHHHHHHHHHHHhCCCCCE
Confidence 677899999999999999995 799999999864321100 0123479999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~v 240 (472)
+.+++. ...+|||||++|++|.+++... . ...++.+|+.+|.|||++||+||||||.|||++.++.+
T Consensus 175 --v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~ 252 (377)
T 3cbl_A 175 --VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVL 252 (377)
T ss_dssp --CCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred --EEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcE
Confidence 444443 5689999999999998875321 1 12478899999999999999999999999999999999
Q ss_pred EEEeCCCceecCcccchhhhccccchhhhhccccc-cccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h--
Q 012042 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRF-HLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K-- 313 (472)
Q Consensus 241 kIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y-~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~-- 313 (472)
+|+|||++......... ........+. .++|+.+..+.++.++||||||+++++.++ +..+... .
T Consensus 253 kl~DfG~s~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~ 324 (377)
T 3cbl_A 253 KISDFGMSREEADGVYA--------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324 (377)
T ss_dssp EECCGGGCEECTTSEEE--------CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH
T ss_pred EECcCCCceecCCCcee--------ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999754321100 0000011122 235554456778999999999999999998 5432211 0
Q ss_pred --hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 --EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 --~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+ .+..++..+.++|.+|++.+|++|||.++-
T Consensus 325 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 365 (377)
T 3cbl_A 325 REFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365 (377)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 00 124577889999999999999999998754
No 162
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.7e-28 Score=240.38 Aligned_cols=229 Identities=14% Similarity=0.007 Sum_probs=163.1
Q ss_pred ceeeecceecccCceeEEEEEeC-CC---CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 91 VFTAVGRQLGVGKESDIFEVARE-DG---TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~~-~g---~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
+.+.+++.||+|+||.||+|.+. ++ ..||||++....... ....+.+|+.+|.++
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l 79 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ---------------------QVEAFLREGLLMRGL 79 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHH---------------------HHHHHHHHHHHHHTC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHH---------------------HHHHHHHHHHHHHhC
Confidence 45778899999999999999863 33 379999875322110 012356899999999
Q ss_pred hhCCCCcceeeec-----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 167 EDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 167 ~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
.|+++ +.++++ +..++||||+.|++|.+++... .+ ..++.+++.+|.+||+.||+||||||.|||+
T Consensus 80 ~h~~i--v~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili 157 (298)
T 3pls_A 80 NHPNV--LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML 157 (298)
T ss_dssp CCTTB--CCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCCCe--eeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE
Confidence 88653 333332 2348999999999998876431 11 2478899999999999999999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
+.++.++|+|||.+.......... .........+....+|+......++.++|+||||+++++++++...+..
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~ 232 (298)
T 3pls_A 158 DESFTVKVADFGLARDILDREYYS-----VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232 (298)
T ss_dssp CTTCCEEECCTTSSCTTTTGGGGC-----SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred cCCCcEEeCcCCCcccccCCcccc-----cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC
Confidence 999999999999997553221100 0011111222233455555667889999999999999999995322110
Q ss_pred ------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ......++..+.++|.+|+..+|.+|||+++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 233 DPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp CGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0 0113457889999999999999999999876543
No 163
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=6.2e-29 Score=242.53 Aligned_cols=223 Identities=14% Similarity=0.003 Sum_probs=160.7
Q ss_pred eeecceecccCceeEEEEEeCC----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGRQLGVGKESDIFEVARED----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.+.+.||+|+||.||+|.+.. +..||||+++...... ....+.+|+.+|.++.|
T Consensus 14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h 72 (281)
T 3cc6_A 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD---------------------NKEKFMSEAVIMKNLDH 72 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHH---------------------HHHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCch---------------------HHHHHHHHHHHHHhCCC
Confidence 6778999999999999998632 3469999886432110 01245689999999988
Q ss_pred CCCCcceeee---cCCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+++ +.+++ .+..++||||++|++|.+++... .. ..++.+|+.+|.+||++||+||||||.|||++.++
T Consensus 73 ~~i--~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 150 (281)
T 3cc6_A 73 PHI--VKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE 150 (281)
T ss_dssp TTB--CCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT
T ss_pred CCc--ceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCC
Confidence 753 44444 36679999999999998876321 11 24788999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h-
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~- 313 (472)
.++|+|||.+.......... ...........+|+.+....++.++|+||||++++++++ +..+... .
T Consensus 151 ~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~ 222 (281)
T 3cc6_A 151 CVKLGDFGLSRYIEDEDYYK--------ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222 (281)
T ss_dssp EEEECCCCGGGCC-----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG
T ss_pred cEEeCccCCCcccccccccc--------cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH
Confidence 99999999997553321100 000111112335554556788999999999999999998 6543210 0
Q ss_pred ----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
......++..+.++|.+|+..+|++|||+.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell 265 (281)
T 3cc6_A 223 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265 (281)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 011345788899999999999999999987653
No 164
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=250.03 Aligned_cols=222 Identities=10% Similarity=0.045 Sum_probs=158.0
Q ss_pred ceeeecceecccCceeEEEEE-----e-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHH
Q 012042 91 VFTAVGRQLGVGKESDIFEVA-----R-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMK 164 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~-----~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~ 164 (472)
--|.+.+.||+|+||.||+|. . .+++.||||+++.... ..+.+|..++.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~e~~~~~ 119 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP-------------------------WEFYIGTQLME 119 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH-------------------------HHHHHHHHHHH
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh-------------------------hHHHHHHHHHH
Confidence 457888999999999999994 3 5689999999864321 02345777777
Q ss_pred HhhhCC-CCcceeee----cCCceeEEeecCCCChhhhhcc------C-C----hHHHHHHHHHHHHHHHHCCceeccCC
Q 012042 165 ALEDHG-FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL------Q-N----PDSVFETIIGLVVRLAEHGLIHCDFN 228 (472)
Q Consensus 165 ~L~~~g-i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~------~-~----~~~i~~qIl~aL~~LH~~GIIHrDLK 228 (472)
+|.+.. -++...+. .+..||||||++|++|.+++.. . . ...++.||+.+|.|||++||||||||
T Consensus 120 ~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiK 199 (365)
T 3e7e_A 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIK 199 (365)
T ss_dssp HSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCS
T ss_pred HhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence 776321 01222222 2678999999999999987641 1 1 23588999999999999999999999
Q ss_pred CCcEEEcC-----------CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccC
Q 012042 229 EFNIMIDD-----------DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGS 297 (472)
Q Consensus 229 P~NILl~~-----------~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG 297 (472)
|.||||+. ++.++|+|||+|+........ .......++..+++|+.+.+..++.++||||||
T Consensus 200 p~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 272 (365)
T 3e7e_A 200 PDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG-------TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVA 272 (365)
T ss_dssp GGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTT-------EEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHH
T ss_pred HHHEEecccccCccccccccCCEEEeeCchhhhhhccCCC-------ceeeeecCCCCCCChHHhcCCCCCccccHHHHH
Confidence 99999988 799999999999865321111 111222344444566655677799999999999
Q ss_pred chhhhhhhccCCcchh---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCC
Q 012042 298 RLSFASISKTAGFLDK---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDE 344 (472)
Q Consensus 298 ~~~f~~~t~~~~~l~~---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e 344 (472)
+++|+++++...+... .......+..+.+++.+|+..+|.+|+++..
T Consensus 273 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~ 328 (365)
T 3e7e_A 273 ATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLD 328 (365)
T ss_dssp HHHHHHHHSSCCCEEEETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHH
T ss_pred HHHHHHHhCCCccccCCCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHH
Confidence 9999999987543211 1111233556789999999999999976543
No 165
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.96 E-value=4.8e-29 Score=246.04 Aligned_cols=224 Identities=13% Similarity=0.138 Sum_probs=156.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||++....... ...+.+|+.++.++.|+++
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~~~e~~~l~~l~h~~i 70 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQS----------------------VKHALREIKIIRRLDHDNI 70 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHH----------------------HHHHHHHHHHHHTCCCTTB
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHH----------------------HHHHHHHHHHHHhcCCCCe
Confidence 678899999999999999995 59999999886432111 1235679999999988763
Q ss_pred Ccceeee------------------cCCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCC
Q 012042 172 PVPNAVD------------------CNRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFN 228 (472)
Q Consensus 172 ~vP~~i~------------------~~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLK 228 (472)
..+++ .+..++||||++| +|.+++... . ...++.+|+.+|.+||++||+|||||
T Consensus 71 --v~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk 147 (320)
T 2i6l_A 71 --VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLK 147 (320)
T ss_dssp --CCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred --eEEEEeccccccccccccccccccCceeEEeeccCC-CHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 33322 1457899999985 787765432 1 22478999999999999999999999
Q ss_pred CCcEEEc-CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-cCCCCcchheeccCchhhhhhhc
Q 012042 229 EFNIMID-DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-DGDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 229 P~NILl~-~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-~~~~~~~sDiySlG~~~f~~~t~ 306 (472)
|.|||++ .++.++|+|||.+.......... .............+|+.+. ...++.++|+||||+++++++++
T Consensus 148 p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g 221 (320)
T 2i6l_A 148 PANLFINTEDLVLKIGDFGLARIMDPHYSHK------GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221 (320)
T ss_dssp GGGEEEETTTTEEEECCCTTCBCC--------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHEEEcCCCCeEEEccCccccccCCCcccc------cccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhC
Confidence 9999997 56789999999997553211100 0111122233344555443 37789999999999999999997
Q ss_pred cCCcchh-------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 307 TAGFLDK-------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 307 ~~~~l~~-------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
..+.... ......++.++.++|.+|+..+|++|||++
T Consensus 222 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 301 (320)
T 2i6l_A 222 KTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301 (320)
T ss_dssp SCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHH
Confidence 5432100 001145889999999999999999999998
Q ss_pred CCCC
Q 012042 344 EGSD 347 (472)
Q Consensus 344 e~~~ 347 (472)
+..+
T Consensus 302 ell~ 305 (320)
T 2i6l_A 302 EALS 305 (320)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 7655
No 166
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.96 E-value=3.9e-29 Score=263.93 Aligned_cols=223 Identities=13% Similarity=0.177 Sum_probs=167.6
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||++........ .....+.+|+.+|.+|.|+++
T Consensus 28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~hpni 88 (484)
T 3nyv_A 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK-------------------TDKESLLREVQLLKQLDHPNI 88 (484)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBS-------------------SCHHHHHHHHHHHTTCCCTTB
T ss_pred eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-------------------hHHHHHHHHHHHHHhCCCCCC
Confidence 788899999999999999994 799999999863321100 001245689999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---cCCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI---DDDE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl---~~~g 238 (472)
+.++.+ +..++||||+.|++|.+.+... . ...++.||+.+|.|||++||+||||||.|||+ +.++
T Consensus 89 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 166 (484)
T 3nyv_A 89 --MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA 166 (484)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTC
T ss_pred --CcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCC
Confidence 444443 5689999999999998765322 1 23488999999999999999999999999999 4568
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||+|....... ......++.++++|+.+ .+.++.++||||+|+++|+++++..+....
T Consensus 167 ~~kl~Dfg~a~~~~~~~----------~~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 235 (484)
T 3nyv_A 167 NIRIIDFGLSTHFEASK----------KMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 235 (484)
T ss_dssp CEEECCTTHHHHBCCCC----------SHHHHTTGGGTCCHHHH-HTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred cEEEEeeeeeEEccccc----------ccccCCCCccccCceee-cCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 89999999997543221 11223444454555543 557999999999999999999986543110
Q ss_pred --hh---------h-ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL---------A-ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~---------~-~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ . ...++..++++|.+||..+|.+|||+++...
T Consensus 236 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 01 1 1357889999999999999999999988766
No 167
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=9.1e-30 Score=254.71 Aligned_cols=222 Identities=10% Similarity=0.014 Sum_probs=157.0
Q ss_pred eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
-|.+.+.||+|+||.||+|.+. ++.||||+++..... .....+|+.+|.++.|+++
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-----------------------~~~~~~E~~~l~~l~hpni 80 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-----------------------SWQNEYEVYSLPGMKHENI 80 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH-----------------------HHHHHHHHHTSTTCCCTTB
T ss_pred hchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH-----------------------HHHHHHHHHHHhcCCCCCc
Confidence 4778899999999999999875 789999998632110 1123468888888887653
Q ss_pred Ccceeeec----C----CceeEEeecCCCChhhhhccCC-----hHHHHHHHHHHHHHHHHC----------CceeccCC
Q 012042 172 PVPNAVDC----N----RHCVIMSLVQGYPLVQVNQLQN-----PDSVFETIIGLVVRLAEH----------GLIHCDFN 228 (472)
Q Consensus 172 ~vP~~i~~----~----~~~LVMEyi~G~~L~~l~~~~~-----~~~i~~qIl~aL~~LH~~----------GIIHrDLK 228 (472)
..+++. . ..++||||++|++|.+++.... ...++.+|+.+|.|||+. ||+|||||
T Consensus 81 --v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlk 158 (322)
T 3soc_A 81 --LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158 (322)
T ss_dssp --CCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCS
T ss_pred --hhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCC
Confidence 444432 1 2589999999999998864321 234889999999999999 99999999
Q ss_pred CCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-----CCCCcchheeccCchhhhh
Q 012042 229 EFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-----GDDGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 229 P~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-----~~~~~~sDiySlG~~~f~~ 303 (472)
|.|||++.++.+||+|||.|......... .......++..+.+|+.+.. ..++.++||||||++++++
T Consensus 159 p~Nill~~~~~~kL~DFg~a~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el 231 (322)
T 3soc_A 159 SKNVLLKNNLTACIADFGLALKFEAGKSA-------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231 (322)
T ss_dssp GGGEEECTTCCEEECCCTTCEEECTTSCC-------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hHhEEECCCCeEEEccCCcccccccccCc-------cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHH
Confidence 99999999999999999999866432211 01111223333345554332 3566788999999999999
Q ss_pred hhccCCcch--------h---------------hhh----ccC---------CCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 304 ISKTAGFLD--------K---------------ELA----ASG---------FTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 304 ~t~~~~~l~--------~---------------~~~----~~~---------~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+++..++.. . .+. ... .+.++.++|.+|++.+|++|||+++-.
T Consensus 232 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 310 (322)
T 3soc_A 232 ASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310 (322)
T ss_dssp HTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHH
Confidence 997432100 0 000 011 123488999999999999999987643
No 168
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.96 E-value=7.2e-29 Score=245.06 Aligned_cols=225 Identities=15% Similarity=0.062 Sum_probs=163.0
Q ss_pred eeeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+.+.||+|+||.||+|.+ .+++.||||+++...... ....+.+|+.+|.+
T Consensus 28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~ 86 (316)
T 2xir_A 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS---------------------EHRALMSELKILIH 86 (316)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH---------------------HHHHHHHHHHHHHH
T ss_pred heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcH---------------------HHHHHHHHHHHHHh
Confidence 477889999999999999984 357899999986432111 01235689999999
Q ss_pred h-hhCCCCcceeeec-----CCceeEEeecCCCChhhhhccCC------------------h----HHHHHHHHHHHHHH
Q 012042 166 L-EDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQN------------------P----DSVFETIIGLVVRL 217 (472)
Q Consensus 166 L-~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~~------------------~----~~i~~qIl~aL~~L 217 (472)
+ +|++ ++.+++. ...++||||++|++|.+++.... + ..++.+|+.+|.+|
T Consensus 87 l~~hp~--iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 164 (316)
T 2xir_A 87 IGHHLN--VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164 (316)
T ss_dssp HCCCTT--BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH
T ss_pred cccCCC--eeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH
Confidence 9 4444 3444442 34899999999999988764321 1 24788999999999
Q ss_pred HHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccC
Q 012042 218 AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGS 297 (472)
Q Consensus 218 H~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG 297 (472)
|++||+||||||.|||++.++.++|+|||.+......... .......++....+|+.+....++.++||||||
T Consensus 165 H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG 237 (316)
T 2xir_A 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237 (316)
T ss_dssp HHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS-------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred HhCCcccccCccceEEECCCCCEEECCCccccccccCccc-------eeccCCCcceeecCchhhccccccchhHHHHHH
Confidence 9999999999999999999999999999999755322110 000111122223455555567899999999999
Q ss_pred chhhhhhh-ccCCcch----h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 298 RLSFASIS-KTAGFLD----K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 298 ~~~f~~~t-~~~~~l~----~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+++|++++ +..+... . . .....++..+.++|.+|+..+|.+|||+++-.
T Consensus 238 ~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 302 (316)
T 2xir_A 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302 (316)
T ss_dssp HHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 99999998 5432210 0 0 11345788999999999999999999987643
No 169
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.96 E-value=8.1e-29 Score=248.35 Aligned_cols=225 Identities=16% Similarity=0.178 Sum_probs=164.3
Q ss_pred eeec-ceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVG-RQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~-~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+. +.||+|+||.||+|.+. +|+.||||+++....... ....+.+|+.+|.++.++
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~- 88 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD--------------------CRAEILHEIAVLELAKSC- 88 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE--------------------CHHHHHHHHHHHHHTTTC-
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH--------------------HHHHHHHHHHHHHhccCC-
Confidence 4444 88999999999999984 699999999864321110 012356799999999653
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC--
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-- 236 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-- 236 (472)
-.++.++.. +..++||||++|++|..++... . ...++.+|+.+|.+||++||+||||||.|||++.
T Consensus 89 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~ 168 (327)
T 3lm5_A 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY 168 (327)
T ss_dssp TTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT
T ss_pred CCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC
Confidence 123444442 5679999999999998875321 1 1248899999999999999999999999999987
Q ss_pred -CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 -DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 -~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||++........ .....++...++|+.+....++.++|+||||+++++++++..+....
T Consensus 169 ~~~~~kL~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 238 (327)
T 3lm5_A 169 PLGDIKIVDFGMSRKIGHACE----------LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238 (327)
T ss_dssp TBCCEEECCGGGCEEC-------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCCcEEEeeCccccccCCccc----------cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 68999999999986543211 11223344445666556788899999999999999999976432110
Q ss_pred -----h----------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -----E----------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -----~----------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. .....++..+.++|.+|+..+|++|||+++...-
T Consensus 239 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 239 QETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 0124578889999999999999999999887763
No 170
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.96 E-value=5.3e-29 Score=247.79 Aligned_cols=227 Identities=15% Similarity=0.070 Sum_probs=153.3
Q ss_pred eeeecceecccCceeEEEEEeC-CCC---EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGT---VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~---~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+.+.||+|+||.||+|.+. ++. .||||+++....... ....+.+|+.+|.++.
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~ 83 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS--------------------DIEEFLREAACMKEFD 83 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CH--------------------HHHHHHHHHHHHTTCC
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHH--------------------HHHHHHHHHHHHHHCC
Confidence 3677899999999999999884 333 899999864321111 0124568999999998
Q ss_pred hCCCCcceeeec----CC------ceeEEeecCCCChhhhhcc--------CCh----HHHHHHHHHHHHHHHHCCceec
Q 012042 168 DHGFPVPNAVDC----NR------HCVIMSLVQGYPLVQVNQL--------QNP----DSVFETIIGLVVRLAEHGLIHC 225 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~------~~LVMEyi~G~~L~~l~~~--------~~~----~~i~~qIl~aL~~LH~~GIIHr 225 (472)
|+++ +.+++. .. .++||||++|++|..++.. ..+ ..++.||+.+|.|||+.||+||
T Consensus 84 h~~i--v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~ 161 (323)
T 3qup_A 84 HPHV--AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHR 161 (323)
T ss_dssp CTTB--CCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCce--ehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 7653 333332 12 2899999999999887521 111 2488999999999999999999
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
||||.|||++.++.++|+|||.+.......... ...........++|+.+....++.++||||||+++|++++
T Consensus 162 Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 234 (323)
T 3qup_A 162 DLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR-------QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234 (323)
T ss_dssp CCSGGGEEECTTSCEEECCCCC------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCcceEEEcCCCCEEEeecccccccccccccc-------ccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHh
Confidence 999999999999999999999997653221100 0001111222345555566789999999999999999998
Q ss_pred -ccCCcch---h-----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 306 -KTAGFLD---K-----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 306 -~~~~~l~---~-----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+..+... . ......++.++.++|.+|+..+|++|||+.+..+
T Consensus 235 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 291 (323)
T 3qup_A 235 RGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291 (323)
T ss_dssp TSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 5432210 0 1123568889999999999999999999765543
No 171
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=8.3e-29 Score=240.35 Aligned_cols=224 Identities=15% Similarity=0.161 Sum_probs=161.3
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||++.... .... .....+.+|+.++..+.|+++
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~-----------------~~~~~~~~e~~~l~~l~h~~i 73 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK--IRSL-----------------DVVGKIKREIQNLKLFRHPHI 73 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHT-----------------TCHHHHHHHHHHHHTCCCTTB
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc--ccch-----------------hHHHHHHHHHHHHhcCCCCCE
Confidence 677899999999999999984 79999999986321 1000 011245679999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++. +..++||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++.++.++
T Consensus 74 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 74 --IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp --CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEE
T ss_pred --eEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEE
Confidence 444442 5689999999999998875321 1 234889999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcchh-------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLDK------- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~~------- 313 (472)
|+|||.+........ .....+.....+|+.+.... .+.++|+||||+++++++++..+....
T Consensus 152 l~dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 221 (276)
T 2h6d_A 152 IADFGLSNMMSDGEF----------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK 221 (276)
T ss_dssp ECCCCGGGCCCC-----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EeecccccccCCCcc----------eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 999999875432211 01112233334555444433 368999999999999999975432110
Q ss_pred hh------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 EL------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ .+..++..+..+|.+|+..+|.+|||+++-.+
T Consensus 222 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 222 KIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 01 23457889999999999999999999876543
No 172
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=5.7e-29 Score=247.11 Aligned_cols=226 Identities=16% Similarity=0.062 Sum_probs=165.1
Q ss_pred eeeecceecccCceeEEEEEeC------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+.+.||+|+||.||+|.+. +++.||||++...... . ....+.+|+.+|.+
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~-~--------------------~~~~~~~E~~~l~~ 84 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-R--------------------ERIEFLNEASVMKE 84 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH-H--------------------HHHHHHHHHHHGGG
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH-H--------------------HHHHHHHHHHHHHh
Confidence 3678899999999999999764 3678999988633211 0 01235679999999
Q ss_pred hhhCCCCcceeeec----CCceeEEeecCCCChhhhhccC-------------Ch---HHHHHHHHHHHHHHHHCCceec
Q 012042 166 LEDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------------NP---DSVFETIIGLVVRLAEHGLIHC 225 (472)
Q Consensus 166 L~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------------~~---~~i~~qIl~aL~~LH~~GIIHr 225 (472)
+.|+++ +.+++. +..++||||++|++|.+++... .. ..++.+|+.+|.+||++||+||
T Consensus 85 l~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 162 (322)
T 1p4o_A 85 FNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162 (322)
T ss_dssp CCCTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCS
T ss_pred cCCCCE--eeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 988753 444443 5689999999999998875321 11 2478899999999999999999
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
||||.|||++.++.++|+|||++......... ........+....+|+.+....++.++||||||++++++++
T Consensus 163 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 235 (322)
T 1p4o_A 163 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235 (322)
T ss_dssp CCSGGGEEECTTCCEEECCTTCCCGGGGGGCE-------EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCccceEEEcCCCeEEECcCcccccccccccc-------ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999754322110 00011111222345555556789999999999999999998
Q ss_pred -ccCCcch-------hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 306 -KTAGFLD-------KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 306 -~~~~~l~-------~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+..+... .. .....++..+.++|.+|+..+|++|||+.+...
T Consensus 236 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 292 (322)
T 1p4o_A 236 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292 (322)
T ss_dssp TSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 4432210 00 123567888999999999999999999987755
No 173
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=7.8e-29 Score=242.87 Aligned_cols=227 Identities=11% Similarity=0.037 Sum_probs=164.7
Q ss_pred eeeecceecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
++.+...||+|+||.||+|.+. ++..||||+++...... ....+.+|+.+|.+|.|
T Consensus 11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~h 69 (287)
T 1u59_A 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---------------------DTEEMMREAQIMHQLDN 69 (287)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---------------------HHHHHHHHHHHHHHCCC
T ss_pred hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchh---------------------HHHHHHHHHHHHHhCCC
Confidence 3444459999999999999863 57789999987532111 11245689999999987
Q ss_pred CCCCcceeee---cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC
Q 012042 169 HGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 169 ~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g 238 (472)
+++ +.+++ .+..++||||++|++|.+++... . ...++.+|+.+|.+||+.||+||||||.|||++.++
T Consensus 70 ~~i--~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~ 147 (287)
T 1u59_A 70 PYI--VRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH 147 (287)
T ss_dssp TTB--CCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT
T ss_pred CCE--eEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCC
Confidence 653 44444 36789999999999999876321 1 124889999999999999999999999999999999
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD----- 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~----- 312 (472)
.++|+|||++.....+..... .......+...++|+.+....++.++|+||||++++++++ +..+...
T Consensus 148 ~~kl~Dfg~~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 221 (287)
T 1u59_A 148 YAKISDFGLSKALGADDSYYT------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221 (287)
T ss_dssp EEEECCCTTCEECTTCSCEEC------CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH
T ss_pred CEEECcccceeeeccCcceee------ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 999999999987643321100 0000011122335554455778999999999999999998 6543211
Q ss_pred --h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ......++..+.++|.+|+..+|++||++++..+
T Consensus 222 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 265 (287)
T 1u59_A 222 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 265 (287)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 0113568899999999999999999999876543
No 174
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.96 E-value=3.4e-29 Score=246.19 Aligned_cols=224 Identities=11% Similarity=0.091 Sum_probs=162.4
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|++.+.||+|+||.||+|.+. +|+.||||++....... ...+.+|+.+|.++.|++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------~~~~~~e~~~l~~l~h~~ 77 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----------------------LEDYIVEIEILATCDHPY 77 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CC----------------------HHHHHHHHHHHHHCCCTT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH----------------------HHHHHHHHHHHhcCCCCC
Confidence 4788899999999999999994 69999999986332110 113457999999998765
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc---CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +.+++. +..++||||++|++|..++.. .. ...++.+|+.+|.+||+.||+||||||.|||++.++.
T Consensus 78 i--~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~ 155 (302)
T 2j7t_A 78 I--VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD 155 (302)
T ss_dssp B--CCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSC
T ss_pred E--eeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCC
Confidence 3 444432 678999999999999876431 11 2348899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-----ccCCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-----TDGDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-----~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
++|+|||++.....+ ......+.+.....+|+.+ ....++.++|+||||+++++++++..+....
T Consensus 156 ~kl~Dfg~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 226 (302)
T 2j7t_A 156 IRLADFGVSAKNLKT---------LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226 (302)
T ss_dssp EEECCCHHHHHHHHH---------HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred EEEEECCCCcccccc---------ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 999999987532111 0011112233333344433 2567889999999999999999976432110
Q ss_pred ---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++..+.++|.+|+..+|++|||+++..+-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 227 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 01134578889999999999999999999877663
No 175
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.96 E-value=6.5e-29 Score=254.42 Aligned_cols=220 Identities=13% Similarity=0.129 Sum_probs=149.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|..|.|+++
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hpnI 90 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII--------------------HAKRTYRELRLLKHMKHENV 90 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHH--------------------HHHHHHHHHHHHHhCCCCCC
Confidence 67789999999999999998 5799999999853321111 11235589999999988763
Q ss_pred Ccceeee----------cCCceeEEeecCCCChhhhhccC-C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC
Q 012042 172 PVPNAVD----------CNRHCVIMSLVQGYPLVQVNQLQ-N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~----------~~~~~LVMEyi~G~~L~~l~~~~-~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~ 236 (472)
..+++ ....|+||||+ |++|..++... . ...++.||+.+|.|||++||+||||||.|||++.
T Consensus 91 --v~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~ 167 (367)
T 2fst_X 91 --IGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167 (367)
T ss_dssp --CCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred --CcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC
Confidence 22222 14579999999 67777765422 1 2348899999999999999999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
++.++|+|||++...... ...+.++.++.+|+.+.+ ..++.++||||+|+++++++++...+...
T Consensus 168 ~~~~kL~DFG~a~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 235 (367)
T 2fst_X 168 DCELKILDFGLARHTADE------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235 (367)
T ss_dssp TCCEEECC---------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CCCEEEeecccccccccc------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999754321 122344445556665444 67899999999999999999976432100
Q ss_pred -----h-------------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----E-------------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----~-------------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ....+.+..+.++|.+||..+|.+|||+++-..
T Consensus 236 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 236 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 001245777889999999999999999988766
No 176
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.96 E-value=1.5e-28 Score=251.11 Aligned_cols=222 Identities=15% Similarity=0.150 Sum_probs=156.0
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|..+.|+++
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hpni 86 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT--------------------HAKRAYRELVLMKCVNHKNI 86 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChH--------------------HHHHHHHHHHHHHhcCCCCc
Confidence 67889999999999999998 4789999999864321111 11235689999999988653
Q ss_pred Ccceeeec----------CCceeEEeecCCCChhhhhccCCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
..+++. ...|+||||++| +|.+.+....+ ..++.||+.+|.|||++||+||||||.|||++.+
T Consensus 87 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~ 163 (371)
T 2xrw_A 87 --IGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163 (371)
T ss_dssp --CCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred --cceEEeeccccccccccceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC
Confidence 333332 256999999987 45555433222 3488999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
+.++|+|||++....... ....+.++..+.+|+.+....++.++||||||+++++++++..++...
T Consensus 164 ~~~kl~Dfg~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 233 (371)
T 2xrw_A 164 CTLKILDFGLARTAGTSF----------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 233 (371)
T ss_dssp SCEEECCCCC--------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred CCEEEEEeeccccccccc----------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999999997543211 111233444445666666778999999999999999999975432100
Q ss_pred ---hh-h-----------------------ccC------------------------CCHHHHHHHHHHHhcCcccCCCC
Q 012042 314 ---EL-A-----------------------ASG------------------------FTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 314 ---~~-~-----------------------~~~------------------------~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.+ . ... .+..+.++|.+||..+|.+|||+
T Consensus 234 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 313 (371)
T 2xrw_A 234 QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 313 (371)
T ss_dssp HHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred HHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCH
Confidence 00 0 000 13567899999999999999999
Q ss_pred CCCCC
Q 012042 343 DEGSD 347 (472)
Q Consensus 343 ~e~~~ 347 (472)
++-..
T Consensus 314 ~e~l~ 318 (371)
T 2xrw_A 314 DEALQ 318 (371)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 87655
No 177
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3e-29 Score=255.05 Aligned_cols=222 Identities=15% Similarity=0.164 Sum_probs=157.3
Q ss_pred eeecceecccCceeEEEEEe----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-
Q 012042 93 TAVGRQLGVGKESDIFEVAR----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE- 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~- 167 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++........ ... ..+.+|+.+|.++.
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~-----------------~~~~~E~~~l~~l~~ 117 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA-KTT-----------------EHTRTERQVLEHIRQ 117 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEE-SSG-----------------GGCCCHHHHHHHHHT
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhh-hHH-----------------HHHHHHHHHHHHccC
Confidence 67889999999999999988 36899999998632110000 000 01235899999995
Q ss_pred hCCCCcceeee----cCCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.++. .+..+|||||++|++|.+++.. .. ...++.||+.+|.|||++||+||||||.|||++.+
T Consensus 118 h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 195 (355)
T 1vzo_A 118 SPFL--VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN 195 (355)
T ss_dssp CTTB--CCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred CCce--eEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 4432 33333 2568999999999999887532 11 12478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--CCCCcchheeccCchhhhhhhccCCcch---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLD--- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~--- 312 (472)
+.++|+|||++........ .....+.++..+++|+.+.. ..++.++||||||+++++++++..+...
T Consensus 196 ~~~kl~DfG~a~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~ 267 (355)
T 1vzo_A 196 GHVVLTDFGLSKEFVADET--------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267 (355)
T ss_dssp SCEEESCSSEEEECCGGGG--------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS
T ss_pred CcEEEeeCCCCeecccCCC--------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc
Confidence 9999999999986532211 11122334444445554432 4578999999999999999997643210
Q ss_pred ----h----hh------hccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 313 ----K----EL------AASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 313 ----~----~~------~~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
. .+ ....++..+.++|.+|+..+|++||+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 311 (355)
T 1vzo_A 268 KNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGC 311 (355)
T ss_dssp CCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred cchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCC
Confidence 0 00 134578889999999999999999943
No 178
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.96 E-value=6.3e-29 Score=250.71 Aligned_cols=230 Identities=13% Similarity=0.134 Sum_probs=161.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ....+.+|+.+|..+.|+++
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 78 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG--------------------FPITALREIKILQLLKHENV 78 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSS--------------------SCHHHHHHHHHHHHCCCTTB
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccccc--------------------chHHHHHHHHHHHhccCCCc
Confidence 77889999999999999999 5799999998854321110 00134579999999988653
Q ss_pred Ccceeeec------------CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 172 PVPNAVDC------------NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 172 ~vP~~i~~------------~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
+.+++. +..+|||||++|..+..+... .. ...++.||+.+|.|||++||+||||||.|||
T Consensus 79 --v~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 156 (351)
T 3mi9_A 79 --VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 156 (351)
T ss_dssp --CCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred --ccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEE
Confidence 444332 246899999997433333221 11 2358899999999999999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcch
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLD 312 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~ 312 (472)
++.++.++|+|||+|.....+.... ........++..+.+|+.+.+ ..++.++||||||+++++++++......
T Consensus 157 ~~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 231 (351)
T 3mi9_A 157 ITRDGVLKLADFGLARAFSLAKNSQ-----PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231 (351)
T ss_dssp ECTTSCEEECCCTTCEECCCCSSSS-----CCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EcCCCCEEEccchhccccccccccc-----ccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999998664321110 011112233334445554443 5689999999999999999997543210
Q ss_pred h-------hh-------h-------------------------------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 K-------EL-------A-------------------------------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~-------~~-------~-------------------------------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .+ . ....+..+.++|.+||..+|++|||+++-..
T Consensus 232 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 232 NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp SSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0 00 0 0002566889999999999999999988766
Q ss_pred CC
Q 012042 348 DG 349 (472)
Q Consensus 348 ~~ 349 (472)
-.
T Consensus 312 hp 313 (351)
T 3mi9_A 312 HD 313 (351)
T ss_dssp SG
T ss_pred CC
Confidence 43
No 179
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.95 E-value=1.6e-28 Score=240.94 Aligned_cols=229 Identities=15% Similarity=0.215 Sum_probs=166.5
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcc-hhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRT-SFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DH 169 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~-sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~ 169 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.... .+.. ......+..+.+|+.+|.++. |+
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~~h~ 84 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA--------------EEVQELREATLKEVDILRKVSGHP 84 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCH--------------HHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCH--------------HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 67789999999999999999 4689999999875421 1100 000112235668999999996 65
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ ++.+++. +..++||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.||+++.++.
T Consensus 85 ~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~ 162 (298)
T 1phk_A 85 N--IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162 (298)
T ss_dssp T--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred C--EeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCc
Confidence 4 3444443 5689999999999998875421 1 2348899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc------cCCCCcchheeccCchhhhhhhccCCcchh
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT------DGDDGSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~------~~~~~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
++|+|||.+........ .....+.....+|+.+. ...++.++|+||||+++++++++..+....
T Consensus 163 ~kl~dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 232 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGEK----------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232 (298)
T ss_dssp EEECCCTTCEECCTTCC----------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEecccchhhcCCCcc----------cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc
Confidence 99999999986542211 01112222233444331 456889999999999999999975432110
Q ss_pred -------hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -------EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -------~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++..+.++|.+|+..+|++|||+++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 233 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00 11357888999999999999999999988765
No 180
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.9e-28 Score=243.57 Aligned_cols=216 Identities=13% Similarity=0.101 Sum_probs=159.4
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|... ++.||||++.... . +..+.+|+.+|.++.|+++
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~----------------------~~~~~~E~~~l~~l~hp~i- 63 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--E----------------------RKAFIVELRQLSRVNHPNI- 63 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--H----------------------HHHHHHHHHHHHHCCCTTB-
T ss_pred eeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--H----------------------HHHHHHHHHHHhcCCCCCc-
Confidence 567899999999999999874 7889999875221 0 1234579999999988653
Q ss_pred cceeeec--CCceeEEeecCCCChhhhhccC------Ch---HHHHHHHHHHHHHHHH---CCceeccCCCCcEEEcCCC
Q 012042 173 VPNAVDC--NRHCVIMSLVQGYPLVQVNQLQ------NP---DSVFETIIGLVVRLAE---HGLIHCDFNEFNIMIDDDE 238 (472)
Q Consensus 173 vP~~i~~--~~~~LVMEyi~G~~L~~l~~~~------~~---~~i~~qIl~aL~~LH~---~GIIHrDLKP~NILl~~~g 238 (472)
.++++. +..++||||++|++|.+++... .. ..++.+|+.+|.|||+ +||+||||||.|||++.++
T Consensus 64 -v~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 142 (307)
T 2eva_A 64 -VKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 142 (307)
T ss_dssp -CCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT
T ss_pred -CeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC
Confidence 444443 6689999999999999876432 11 2467899999999999 8999999999999999887
Q ss_pred c-EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----
Q 012042 239 K-VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----- 312 (472)
Q Consensus 239 ~-vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----- 312 (472)
. ++|+|||.+....... ....+....++|+.+....++.++||||||+++++++++..+...
T Consensus 143 ~~~kl~Dfg~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 210 (307)
T 2eva_A 143 TVLKICDFGTACDIQTHM------------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210 (307)
T ss_dssp TEEEECCCCC------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH
T ss_pred CEEEEccccccccccccc------------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH
Confidence 6 7999999997543211 111233334455555667899999999999999999997643211
Q ss_pred h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. . .....++..+.++|.+|+..+|++|||+++-.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 211 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 0 012467889999999999999999999887654
No 181
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=6.1e-29 Score=261.23 Aligned_cols=221 Identities=13% Similarity=0.058 Sum_probs=162.3
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|.+..+..||||+++...... ..+.+|+.+|.+|.|+++
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~hp~i- 241 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-----------------------EAFLQEAQVMKKLRHEKL- 241 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH-----------------------HHHHHHHHHHHHCCCTTB-
T ss_pred ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCH-----------------------HHHHHHHHHHHhCCCCCE-
Confidence 56788999999999999999777789999987443111 134579999999988763
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++ ....+|||||++|++|.+++... .+ ..++.||+.+|.|||++||+||||||.|||++.++.++
T Consensus 242 -v~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~k 320 (452)
T 1fmk_A 242 -VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320 (452)
T ss_dssp -CCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred -eeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEE
Confidence 34443 26789999999999999876421 11 24789999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h---
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K--- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~--- 313 (472)
|+|||++......... .......+.. ++|+......++.++||||||++++++++ +..+... .
T Consensus 321 l~DfG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~ 391 (452)
T 1fmk_A 321 VADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391 (452)
T ss_dssp ECCCCTTC-----------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred ECCCccceecCCCcee---------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999755321100 0000111222 34554456789999999999999999998 5432211 0
Q ss_pred -hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ .+..++..+.++|.+|+..+|++|||.++...
T Consensus 392 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~ 433 (452)
T 1fmk_A 392 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 433 (452)
T ss_dssp HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 00 13467888999999999999999999886543
No 182
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.95 E-value=1.4e-28 Score=244.27 Aligned_cols=220 Identities=15% Similarity=0.116 Sum_probs=159.8
Q ss_pred eeecceecccCceeEEEEEe-C-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-E-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+ . +|+.||||+++.... . ...+.+|+.++..+.+.+
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~-~----------------------~~~~~~e~~~l~~l~~~~ 72 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR-Y----------------------CEAARSEIQVLEHLNTTD 72 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHH-H----------------------HHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCc-h----------------------hHHHHHHHHHHHHhhhcC
Confidence 77889999999999999987 3 688999999863211 0 123567999999998754
Q ss_pred C-C---cceeeec----CCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 171 F-P---VPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 171 i-~---vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
. . ++.+++. +..++||||+ |++|.+++... . ...++.||+.+|.|||++||+||||||.|||+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 151 (339)
T 1z57_A 73 PNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151 (339)
T ss_dssp TTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred CCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEE
Confidence 2 1 3333332 6689999999 77777765322 1 12488999999999999999999999999999
Q ss_pred cC-------------------CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheec
Q 012042 235 DD-------------------DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDE 295 (472)
Q Consensus 235 ~~-------------------~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiyS 295 (472)
+. ++.++|+|||++....... ....++....+|+.+....++.++||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~Di~s 219 (339)
T 1z57_A 152 VQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH------------STLVSTRHYRAPEVILALGWSQPCDVWS 219 (339)
T ss_dssp SCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC------------CSSCSCGGGCCHHHHTTSCCCTHHHHHH
T ss_pred eccccccccCCccccccccccCCCceEeeCcccccCcccc------------ccccCCccccChHHhhCCCCCcchhhHH
Confidence 86 5679999999997543221 1122333344566556778899999999
Q ss_pred cCchhhhhhhccCCcchh---h----h---h-----------------------------------------------cc
Q 012042 296 GSRLSFASISKTAGFLDK---E----L---A-----------------------------------------------AS 318 (472)
Q Consensus 296 lG~~~f~~~t~~~~~l~~---~----~---~-----------------------------------------------~~ 318 (472)
||+++++++++....... . + . ..
T Consensus 220 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (339)
T 1z57_A 220 IGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQD 299 (339)
T ss_dssp HHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCS
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccch
Confidence 999999999975432110 0 0 0 00
Q ss_pred CCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 319 GFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 319 ~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
..+..+.++|.+|+..+|.+|||++|-.+.
T Consensus 300 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 300 VEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 113457799999999999999999876653
No 183
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.95 E-value=2.7e-28 Score=246.56 Aligned_cols=221 Identities=12% Similarity=0.158 Sum_probs=160.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......-. ....+.+|+.+|.++.|+++
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~~i 85 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI--------------------FAKRAYRELLLLKHMQHENV 85 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchH--------------------HHHHHHHHHHHHHhcCCCCc
Confidence 67789999999999999998 5799999999864321110 11235689999999988653
Q ss_pred Ccceeeec----------CCceeEEeecCCCChhhhhccCCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----------NRHCVIMSLVQGYPLVQVNQLQNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~~~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+++. ...|+||||++| +|..++....+ ..++.+|+.+|.|||++||+||||||.|||++.+
T Consensus 86 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~ 162 (353)
T 3coi_A 86 --IGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED 162 (353)
T ss_dssp --CCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT
T ss_pred --ccHhheEecccccccceeEEEEeccccC-CHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCC
Confidence 333321 134999999985 67665543322 2488999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
+.++|+|||.+...... ...+.+...+.+|+.... ..++.++|+||||+++++++++.......
T Consensus 163 ~~~kl~Dfg~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 230 (353)
T 3coi_A 163 CELKILDFGLARHADAE------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 230 (353)
T ss_dssp CCEEECSTTCTTC--------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH
T ss_pred CcEEEeecccccCCCCC------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999754321 112233333445554443 67899999999999999999975432110
Q ss_pred -----------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -----------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -----------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++..+.++|.+||..+|++|||+++....
T Consensus 231 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 231 DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00113568889999999999999999999877653
No 184
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.95 E-value=6e-29 Score=263.07 Aligned_cols=222 Identities=14% Similarity=0.188 Sum_probs=164.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++....... .....+.+|+.+|.+|.|+++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------~~~~~~~~E~~~l~~l~hpni 83 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--------------------KDTSTILREVELLKKLDHPNI 83 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--------------------SCHHHHHHHHHHHHHCCCTTB
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--------------------hHHHHHHHHHHHHHhCCCCCc
Confidence 78899999999999999998 479999999985211000 001245689999999988763
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc---CCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID---DDE 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~---~~g 238 (472)
+.++.+ ...|+||||++|++|...+.. .. ...++.+|+.+|.|||++||+||||||.|||++ .++
T Consensus 84 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 161 (486)
T 3mwu_A 84 --MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC 161 (486)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTC
T ss_pred --CeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence 444442 568999999999999776421 11 235889999999999999999999999999995 456
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
.++|+|||++........ .....++.++++|+. ..+.++.++||||+|+++|+++++..+....
T Consensus 162 ~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 230 (486)
T 3mwu_A 162 DIKIIDFGLSTCFQQNTK----------MKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230 (486)
T ss_dssp CEEECSCSCTTTBCCC--------------CCTTGGGGCCGGG-GGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred CEEEEECCcCeECCCCCc----------cCCCcCCCCCCCHHH-hCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 799999999975432211 112234444455554 4567999999999999999999986543110
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++.+++++|.+||..+|.+|||+.+-.+
T Consensus 231 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 231 LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01 11357889999999999999999999987765
No 185
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.95 E-value=8.4e-29 Score=244.31 Aligned_cols=228 Identities=12% Similarity=0.072 Sum_probs=160.9
Q ss_pred CCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 89 RGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 89 ~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
...++..++.||+|+||.||+|.. +++.||||++......... .....+.+|+.+|.++.|
T Consensus 29 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~------------------~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 29 ERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE------------------ELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTT------------------THHHHHHHHHHHHHHCCC
T ss_pred cccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchH------------------HHHHHHHHHHHHHHhcCC
Confidence 334556679999999999999986 6889999988642110000 011245689999999988
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhcc-----CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL-----QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~-----~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
+++ +.++++ +..++||||++|++|.+++.. ..+ ..++.+|+.+|.+||++||+||||||.|||++
T Consensus 90 ~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 90 ENL--VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD 167 (307)
T ss_dssp TTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred CCe--EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc
Confidence 753 444443 568999999999999887531 111 24788999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
.++.++|+|||.+.......... ....+.+. .+|.+++...+.++.++|+||||+++++++++..+....
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~g~-~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTV-------MTSRIVGT-TAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCE-------ECSSCCSC-GGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred CCCcEEEeecccccccccccccc-------cccccCCC-cCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 99999999999998654321110 01112222 334334344556899999999999999999975432110
Q ss_pred ---------hhh-----------------ccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ---------ELA-----------------ASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ---------~~~-----------------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.+. ....+..+..+|.+|+..+|.+|||.++-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l 297 (307)
T 2nru_A 240 PQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297 (307)
T ss_dssp SSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred hHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 000 01123457789999999999999998753
No 186
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.95 E-value=3.2e-28 Score=248.60 Aligned_cols=221 Identities=12% Similarity=0.160 Sum_probs=160.1
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......-. ....+.+|+.+|..+.|+++
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~h~ni 103 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI--------------------FAKRAYRELLLLKHMQHENV 103 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHH--------------------HHHHHHHHHHHHHHCCCTTB
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchh--------------------HHHHHHHHHHHHHhcCCCCc
Confidence 67789999999999999998 5799999999864321111 11245689999999988763
Q ss_pred Ccceeeec----C------CceeEEeecCCCChhhhhccCCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC----N------RHCVIMSLVQGYPLVQVNQLQNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~----~------~~~LVMEyi~G~~L~~l~~~~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+++. + ..++||||++| +|.+.+....+ ..++.+|+.+|.|||++||+||||||.|||++.+
T Consensus 104 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~ 180 (371)
T 4exu_A 104 --IGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED 180 (371)
T ss_dssp --CCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred --hhhhhheeccCCcccceeEEEEEccccc-cHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCC
Confidence 333331 2 23999999985 66665543322 3478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK--- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~--- 313 (472)
+.++|+|||++.....+ ...+.++..+.+|+.+.. ..++.++||||||+++++++++..++...
T Consensus 181 ~~~kL~Dfg~a~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 248 (371)
T 4exu_A 181 CELKILDFGLARHADAE------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 248 (371)
T ss_dssp CCEEECSTTCC--------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred CCEEEEecCcccccccC------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 99999999999754321 111233333445554444 67899999999999999999976432110
Q ss_pred -----------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 -----------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 -----------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++..+.++|.+||..+|++|||+++....
T Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 249 DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00113568889999999999999999999877653
No 187
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.95 E-value=5.9e-29 Score=264.58 Aligned_cols=222 Identities=13% Similarity=0.063 Sum_probs=164.5
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
+.+.+.||+|+||.||+|.+. ++..||||+++...... ..+.+|+.+|.+|.|+++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~hpni 278 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----------------------EEFLKEAAVMKEIKHPNL 278 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCH-----------------------HHHHHHHHHHHHCCCTTB
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccch-----------------------HHHHHHHHHHHhcCCCCE
Confidence 567899999999999999985 58899999986442211 134579999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
..++++ ...+|||||++|++|.+++... .+ ..++.||+.+|.|||++||+||||||.|||++.++.
T Consensus 279 --v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~ 356 (495)
T 1opk_A 279 --VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL 356 (495)
T ss_dssp --CCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC
T ss_pred --eeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCc
Confidence 444442 5689999999999998876421 11 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD------ 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~------ 312 (472)
+||+|||++......... .......+...++|+.+....++.++||||||++++++++ +..+...
T Consensus 357 ~kl~DFG~a~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~ 428 (495)
T 1opk_A 357 VKVADFGLSRLMTGDTYT--------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 428 (495)
T ss_dssp EEECCTTCEECCTTCCEE--------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEEeecccceeccCCcee--------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999865322110 0000011112234554456778999999999999999998 5432210
Q ss_pred -hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+ ....++..+.++|.+|+..+|++|||..+..+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 429 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 000 13467889999999999999999999987643
No 188
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=1e-28 Score=253.05 Aligned_cols=219 Identities=18% Similarity=0.178 Sum_probs=159.6
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||++...... ..+|+.+|+.|.|++
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--------------------------~~~E~~il~~l~hpn 61 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--------------------------KNRELDIMKVLDHVN 61 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS--------------------------CCHHHHHHTTCCCTT
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch--------------------------HHHHHHHHHHcCCCC
Confidence 377889999999999999998 57999999988643211 125999999998865
Q ss_pred CCcceeeec------------------------------------------CCceeEEeecCCCChhhhhc------cCC
Q 012042 171 FPVPNAVDC------------------------------------------NRHCVIMSLVQGYPLVQVNQ------LQN 202 (472)
Q Consensus 171 i~vP~~i~~------------------------------------------~~~~LVMEyi~G~~L~~l~~------~~~ 202 (472)
+ ..++++ ...++||||++| +|.+.+. ...
T Consensus 62 I--v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l 138 (383)
T 3eb0_A 62 I--IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSI 138 (383)
T ss_dssp B--CCEEEEEEEC-------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCC
T ss_pred c--cchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCC
Confidence 3 333221 126799999996 5544332 112
Q ss_pred h----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccc
Q 012042 203 P----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL 277 (472)
Q Consensus 203 ~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~ 277 (472)
+ ..++.||+.+|.|||++||+||||||.|||++ .++.++|+|||+|........ ...+.+..++.
T Consensus 139 ~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~t~~y~ 208 (383)
T 3eb0_A 139 PMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP----------SVAYICSRFYR 208 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC----------CCCCCCCSSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC----------CcCcccCCCcc
Confidence 2 34788999999999999999999999999998 678999999999986532211 11223344455
Q ss_pred ccccccc-CCCCcchheeccCchhhhhhhccCCcchh------------------------------------------h
Q 012042 278 NFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK------------------------------------------E 314 (472)
Q Consensus 278 ~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~------------------------------------------~ 314 (472)
+|+.+.+ ..++.++||||+|+++++++++...+... .
T Consensus 209 aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (383)
T 3eb0_A 209 APELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK 288 (383)
T ss_dssp CHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHH
T ss_pred CHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHh
Confidence 6665444 45899999999999999999976432100 0
Q ss_pred hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 315 LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 315 ~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.....++..+.++|.+||..+|++|||+.+-..-.
T Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 323 (383)
T 3eb0_A 289 ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHP 323 (383)
T ss_dssp HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred hCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCH
Confidence 11234778899999999999999999998876643
No 189
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.95 E-value=6.1e-29 Score=248.74 Aligned_cols=222 Identities=12% Similarity=0.073 Sum_probs=160.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCE----EEEEEeecCcc--hhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTV----LAMKLHRLGRT--SFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~----VAVKi~r~~~~--sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
|.+.+.||+|+||.||+|.+ .+|+. ||+|++..... .+. .+.+|+.++.+
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~-----------------------~~~~e~~~l~~ 71 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ-----------------------AVTDHMLAIGS 71 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBC-----------------------SCCHHHHHHHT
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHH-----------------------HHHHHHHHHhc
Confidence 67789999999999999998 45654 77777642210 010 12368899999
Q ss_pred hhhCCCCcceeeec---CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 166 LEDHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 166 L~~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
+.|+++ +.++++ ...++||||++|++|.+.+... ....++.||+.+|.|||++||+||||||.|||++
T Consensus 72 l~h~~i--v~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~ 149 (325)
T 3kex_A 72 LDHAHI--VRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK 149 (325)
T ss_dssp CCCTTB--CCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES
T ss_pred CCCCCc--CeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC
Confidence 988653 444443 6789999999999998865321 1235889999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCchhhhhhh-ccCCcch-
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD- 312 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~- 312 (472)
.++.++|+|||++......... ..........+ ++|+.+....++.++||||||++++++++ +..+...
T Consensus 150 ~~~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 221 (325)
T 3kex_A 150 SPSQVQVADFGVADLLPPDDKQ--------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221 (325)
T ss_dssp SSSCEEECSCSGGGGSCCCTTC--------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred CCCeEEECCCCcccccCccccc--------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence 9999999999999765322111 01111223333 45555556789999999999999999998 6533211
Q ss_pred ------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ......++..+..+|.+|+..+|.+|||..+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~ 269 (325)
T 3kex_A 222 RLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN 269 (325)
T ss_dssp CTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 0112346778899999999999999999987655
No 190
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.95 E-value=7.9e-29 Score=243.26 Aligned_cols=223 Identities=13% Similarity=0.159 Sum_probs=159.8
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++....... ....+.+|+.++.++.|+++
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 64 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG--------------------VPSTAIREISLLKELNHPNI 64 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------------------------CCHHHHHHHHHHTTCCCTTB
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchh--------------------hHHHHHHHHHHHHHcCCCCe
Confidence 567899999999999999984 799999998864321110 01234579999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+.+++. +..++||||++| +|.+++... .+ ..++.+|+.+|.+||++||+||||||.||+++.++.
T Consensus 65 --~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~ 141 (299)
T 2r3i_A 65 --VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141 (299)
T ss_dssp --CCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred --eeEEEEEecCCceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCC
Confidence 444442 668999999985 777664321 11 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-----
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK----- 313 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~----- 313 (472)
++|+|||.+.....+... .....+.....+|+...+ ..++.++|+||||+++++++++.......
T Consensus 142 ~kl~dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 212 (299)
T 2r3i_A 142 IKLADFGLARAFGVPVRT---------YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212 (299)
T ss_dssp EEECSTTHHHHHCCCSBC---------TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred EEECcchhhhhccCCccc---------cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 999999998755332111 111122233345554433 34799999999999999999975432100
Q ss_pred --h-----------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --E-----------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~-----------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++.++.++|.+|+..+|++|||+++..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 213 LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 001347788999999999999999999987765
No 191
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.95 E-value=8e-29 Score=247.54 Aligned_cols=224 Identities=13% Similarity=0.070 Sum_probs=162.4
Q ss_pred eeeecceecccCceeEEEEEeC-CC-----CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DG-----TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g-----~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
-|.+.+.||+|+||.||+|.+. ++ ..||||+++.....- ....+.+|+.+|.+
T Consensus 47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~ 105 (333)
T 2i1m_A 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD---------------------EKEALMSELKIMSH 105 (333)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHH---------------------HHHHHHHHHHHHHH
T ss_pred HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChH---------------------HHHHHHHHHHHHHh
Confidence 4678899999999999999973 33 479999986432111 11245689999999
Q ss_pred h-hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC-----------------C---hHHHHHHHHHHHHHHHHC
Q 012042 166 L-EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-----------------N---PDSVFETIIGLVVRLAEH 220 (472)
Q Consensus 166 L-~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-----------------~---~~~i~~qIl~aL~~LH~~ 220 (472)
| .|+++ +.+++. +..++||||++|++|.+++... . ...++.+|+.+|.|||++
T Consensus 106 l~~h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 183 (333)
T 2i1m_A 106 LGQHENI--VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK 183 (333)
T ss_dssp HCCCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCCe--eeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 9 67653 444443 6789999999999998875311 1 124788999999999999
Q ss_pred CceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccc-ccccccccCCCCcchheeccCch
Q 012042 221 GLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFH-LNFQETTDGDDGSDIDTDEGSRL 299 (472)
Q Consensus 221 GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~-~~~~~~~~~~~~~~sDiySlG~~ 299 (472)
||+||||||.|||++.++.++|+|||++.......... .........+ ++|+.+....++.++||||||++
T Consensus 184 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 255 (333)
T 2i1m_A 184 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255 (333)
T ss_dssp TEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSE--------ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred CcccCCcccceEEECCCCeEEECcccccccccccccee--------ecCCCCCCccccCHHHhccCCCChHHHHHHHHHH
Confidence 99999999999999999999999999997553221100 0011111223 35554556789999999999999
Q ss_pred hhhhhh-ccCCcch----h---h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 300 SFASIS-KTAGFLD----K---E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 300 ~f~~~t-~~~~~l~----~---~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
++++++ +..+... . . ......+..+.++|.+|+..+|.+|||.++..
T Consensus 256 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 318 (333)
T 2i1m_A 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 318 (333)
T ss_dssp HHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 999998 5432210 0 0 01244678899999999999999999987643
No 192
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.95 E-value=1.1e-28 Score=261.69 Aligned_cols=223 Identities=14% Similarity=0.182 Sum_probs=162.8
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
.|.+.+.||+|+||.||+|.+ .++..||||+++....... ....+.+|+.+|..|.|++
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~hpn 97 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS--------------------SNSKLLEEVAVLKLLDHPN 97 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C--------------------TTHHHHHHHHHHTTCCCTT
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch--------------------HHHHHHHHHHHHHhCCCCC
Confidence 378899999999999999998 4799999999864321110 0123557999999998875
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC---
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD--- 237 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~--- 237 (472)
+ +.++++ ...|+|||||+|++|.+.+.. .. ...++.+|+.+|.|||++||+||||||.|||++..
T Consensus 98 i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 175 (494)
T 3lij_A 98 I--MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKD 175 (494)
T ss_dssp B--CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTT
T ss_pred C--CeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCC
Confidence 3 444443 568999999999999775421 11 23588999999999999999999999999999753
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h-
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~- 313 (472)
+.++|+|||+|.....+.. .....++.++++|+. ..+.++.++||||+|+++++++++..+... .
T Consensus 176 ~~~kl~DfG~a~~~~~~~~----------~~~~~gt~~y~aPE~-l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 244 (494)
T 3lij_A 176 ALIKIVDFGLSAVFENQKK----------MKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244 (494)
T ss_dssp CCEEECCCTTCEECBTTBC----------BCCCCSCTTTCCHHH-HTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred CcEEEEECCCCeECCCCcc----------ccccCCCcCeeCHHH-HcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 4599999999986543211 112234444455554 456799999999999999999998644311 0
Q ss_pred ---hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ---EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ---~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++..+.++|.+||..+|.+|||+++..+
T Consensus 245 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 245 ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 00 01357889999999999999999999988765
No 193
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=256.10 Aligned_cols=225 Identities=16% Similarity=0.140 Sum_probs=162.1
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++... ... + . ....+.+|..+|..+.|++
T Consensus 62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~--~~~----~-----~--------~~~~~~~E~~il~~~~hp~ 122 (412)
T 2vd5_A 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD--MLK----R-----G--------EVSCFREERDVLVNGDRRW 122 (412)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHH----H-----G--------GGCCHHHHHHHHHHSCTTT
T ss_pred hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH--hhh----H-----H--------HHHHHHHHHHHHHhcCCCC
Confidence 477889999999999999998 579999999986211 000 0 0 0012457889999998765
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +.++. .+..||||||++|++|..++.. ..+ ..++.+|+.+|.|||++|||||||||.|||++.+|.
T Consensus 123 I--v~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~ 200 (412)
T 2vd5_A 123 I--TQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH 200 (412)
T ss_dssp B--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred e--eeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCC
Confidence 3 33333 2568999999999999987642 222 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-------cCCCCcchheeccCchhhhhhhccCCcch
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-------DGDDGSDIDTDEGSRLSFASISKTAGFLD 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-------~~~~~~~sDiySlG~~~f~~~t~~~~~l~ 312 (472)
+||+|||+|+........ ....+.++..+++|+.+. ...++.++|+||||+++|+++++..++..
T Consensus 201 vkL~DFGla~~~~~~~~~--------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 201 IRLADFGSCLKLRADGTV--------RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp EEECCCTTCEECCTTSCE--------ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEeechhheeccCCCcc--------ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 999999999865432110 011223444444555443 35689999999999999999998654311
Q ss_pred -------hhh---------h--ccCCCHHHHHHHHHHHhcCcccCC---CCCCCC
Q 012042 313 -------KEL---------A--ASGFTRKDQDVIQKFIGGSIEESG---SDDEGS 346 (472)
Q Consensus 313 -------~~~---------~--~~~~s~~~~~~l~k~l~~~p~~R~---s~~e~~ 346 (472)
..+ . ...++.+.+++|.+||. +|++|+ ++++-.
T Consensus 273 ~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~ 326 (412)
T 2vd5_A 273 DSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFR 326 (412)
T ss_dssp SSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHH
T ss_pred CCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence 001 0 24689999999999999 999985 554433
No 194
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.95 E-value=8.8e-29 Score=242.95 Aligned_cols=225 Identities=12% Similarity=0.041 Sum_probs=161.6
Q ss_pred eeecc-eecccCceeEEEEEe---CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAVGR-QLGVGKESDIFEVAR---EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i~~-~IG~G~fg~VY~a~~---~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.+.+ .||+|+||.||+|.+ .+++.||||+++....... ....+.+|+.++..+.|
T Consensus 18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h 77 (291)
T 1xbb_A 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA--------------------LKDELLAEANVMQQLDN 77 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH--------------------HHHHHHHHHHHHHTCCC
T ss_pred hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHH--------------------HHHHHHHHHHHHHhCCC
Confidence 55666 999999999999965 3478899999864321110 11245689999999987
Q ss_pred CCCCcceeee---cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 169 HGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 169 ~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+++ +.+++ .+..++||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++.++.
T Consensus 78 ~~i--~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~ 155 (291)
T 1xbb_A 78 PYI--VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 155 (291)
T ss_dssp TTB--CCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE
T ss_pred CCE--EEEEEEECCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCc
Confidence 653 44443 36789999999999999876432 1 2248899999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD------ 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~------ 312 (472)
++|+|||.+.....+.... ........+...++|+.+....++.++|+||||++++++++ +..+...
T Consensus 156 ~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 229 (291)
T 1xbb_A 156 AKISDFGLSKALRADENYY------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229 (291)
T ss_dssp EEECCCTTCEECCTTCSEE------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred EEEccCCcceeeccCCCcc------cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 9999999998664322110 00000011112335554456678899999999999999998 6543211
Q ss_pred -hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 -KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 -~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. .....++..+.++|.+|+..+|.+|||+.+-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 270 (291)
T 1xbb_A 230 TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 270 (291)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00 1135678999999999999999999998764
No 195
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.95 E-value=2.6e-28 Score=259.57 Aligned_cols=227 Identities=13% Similarity=0.134 Sum_probs=166.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+.......- .+.+|+.++..|.++.
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~------------------------~~~~E~~il~~L~~~~- 63 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP------------------------QLLYESKIYRILQGGT- 63 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC------------------------CHHHHHHHHHHTTTST-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH------------------------HHHHHHHHHHHhcCCC-
Confidence 77889999999999999998 579999999876432100 1346999999998753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc---CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---cCC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL---QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI---DDD 237 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~---~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl---~~~ 237 (472)
.+|.+..+ ...+|||||+ |++|.+++.. .. ...++.||+.+|.|||++|||||||||.|||| +.+
T Consensus 64 ~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 142 (483)
T 3sv0_A 64 GIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142 (483)
T ss_dssp TCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGT
T ss_pred CCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCC
Confidence 23333322 5679999999 8899887642 11 23488999999999999999999999999999 578
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----- 312 (472)
+.++|+|||++............ .......+.+...+++|+.+....++.++||||||+++|+++++..++..
T Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~--~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~ 220 (483)
T 3sv0_A 143 NQVYIIDFGLAKKYRDTSTHQHI--PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 220 (483)
T ss_dssp TCEEECCCTTCEECBCTTTCCBC--CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred CeEEEEeCCcceeccCCcccccc--ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh
Confidence 89999999999876533221100 00011122333344456655677899999999999999999997543211
Q ss_pred ------h----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ------K----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ------~----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....+++.++..+|.+|+..+|++||+.++..+
T Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 221 KKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 1123688999999999999999999999886544
No 196
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=1e-28 Score=246.88 Aligned_cols=224 Identities=13% Similarity=0.064 Sum_probs=163.7
Q ss_pred eeeecceecccCceeEEEEEe-----CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-----EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-----~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
-|.+.+.||+|+||.||+|.. .+|+.||||+++...... ...+.+|+.+|.++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~E~~~l~~l 99 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----------------------LRDFEREIEILKSL 99 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHH----------------------HHHHHHHHHHHHTC
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHH----------------------HHHHHHHHHHHHhC
Confidence 367889999999999999983 468899999986432111 12356899999999
Q ss_pred hhCCCCcceeeec------CCceeEEeecCCCChhhhhccC----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 167 EDHGFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 167 ~~~gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
.|+++ +.+++. ...++||||++|++|.+++... .. ..++.+|+.+|.+||+.||+||||||.|||
T Consensus 100 ~h~~i--v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIl 177 (326)
T 2w1i_A 100 QHDNI--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 177 (326)
T ss_dssp CCTTB--CCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred CCCCe--eeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEE
Confidence 87653 344332 3578999999999999876422 11 247889999999999999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD- 312 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~- 312 (472)
++.++.++|+|||.+............ ........+.++|+.+....++.++||||||+++++++++..+...
T Consensus 178 i~~~~~~kL~Dfg~~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 251 (326)
T 2w1i_A 178 VENENRVKIGDFGLTKVLPQDKEYYKV------KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251 (326)
T ss_dssp EEETTEEEECCCTTCEECCSSCSEEEC------SSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH
T ss_pred EcCCCcEEEecCcchhhcccccccccc------ccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999866432211000 0001112233455555566789999999999999999986422110
Q ss_pred ----------------------hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 313 ----------------------KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 313 ----------------------~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
.. .....++.++..+|.+|+..+|++|||+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 313 (326)
T 2w1i_A 252 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313 (326)
T ss_dssp HHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00 0134678899999999999999999998764
No 197
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=2.1e-29 Score=251.67 Aligned_cols=228 Identities=10% Similarity=0.107 Sum_probs=152.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.. +++.||||++..... . ....+.|+..+..+.|+++
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~--~---------------------~~~~e~~~~~~~~~~h~~i- 69 (336)
T 3g2f_A 15 LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR--Q---------------------NFINEKNIYRVPLMEHDNI- 69 (336)
T ss_dssp EEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH--H---------------------HHHHHHHHHTSTTCCCTTB-
T ss_pred hheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch--h---------------------hHHHHHHHHHHHhccCcch-
Confidence 67789999999999999976 688999999863210 0 0011234444445666543
Q ss_pred cceeee------c---CCceeEEeecCCCChhhhhccCC-----hHHHHHHHHHHHHHHHHC---------CceeccCCC
Q 012042 173 VPNAVD------C---NRHCVIMSLVQGYPLVQVNQLQN-----PDSVFETIIGLVVRLAEH---------GLIHCDFNE 229 (472)
Q Consensus 173 vP~~i~------~---~~~~LVMEyi~G~~L~~l~~~~~-----~~~i~~qIl~aL~~LH~~---------GIIHrDLKP 229 (472)
..++. . ...+|||||++|++|.+++.... ...++.+|+.+|.|||+. ||+||||||
T Consensus 70 -~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp 148 (336)
T 3g2f_A 70 -ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148 (336)
T ss_dssp -CCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSG
T ss_pred -hhheecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeeccccc
Confidence 33332 1 24589999999999998764321 124889999999999999 999999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-------CCCCcchheeccCchhhh
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-------GDDGSDIDTDEGSRLSFA 302 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-------~~~~~~sDiySlG~~~f~ 302 (472)
.|||++.++.++|+|||++...........- ........+.++..+.+|+.+.+ ..++.++||||||+++|+
T Consensus 149 ~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~e 227 (336)
T 3g2f_A 149 RNVLVKNDGTCVISDFGLSMRLTGNRLVRPG-EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWE 227 (336)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCC----------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCcEEEeeccceeecccccccCcc-ccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHH
Confidence 9999999999999999999876532211000 00011112233334445554433 356678999999999999
Q ss_pred hhhccCCcchh-----------------------------hhhccC----------CCHHHHHHHHHHHhcCcccCCCCC
Q 012042 303 SISKTAGFLDK-----------------------------ELAASG----------FTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 303 ~~t~~~~~l~~-----------------------------~~~~~~----------~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
++++..+.... ...... .+..+.++|.+|+..+|++|||++
T Consensus 228 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 307 (336)
T 3g2f_A 228 IFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQ 307 (336)
T ss_dssp HHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchH
Confidence 99863221000 000011 223688999999999999999998
Q ss_pred CCCC
Q 012042 344 EGSD 347 (472)
Q Consensus 344 e~~~ 347 (472)
+-.+
T Consensus 308 e~l~ 311 (336)
T 3g2f_A 308 XAEE 311 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.95 E-value=1.5e-28 Score=261.39 Aligned_cols=233 Identities=12% Similarity=0.179 Sum_probs=165.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++......... +.... .........+.+|+.+|.+|.|+++
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~E~~~l~~l~hpni 108 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGR------YSDDN---KNIEKFHEEIYNEISLLKSLDHPNI 108 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC-------------------------CTHHHHHHHHHHHHTCCCTTB
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhccccc------ccccc---hhhHHHHHHHHHHHHHHHhCCCCCC
Confidence 78889999999999999998 46899999998643211000 00000 0000112356789999999988653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCC---
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE--- 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g--- 238 (472)
+.++++ ...|||||||+|++|.+.+.. .. ...++.+|+.+|.|||++||+||||||.|||++.++
T Consensus 109 --v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 109 --IKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp --CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCS
T ss_pred --CeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCc
Confidence 444443 567999999999999776421 11 235889999999999999999999999999998765
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch---h--
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD---K-- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~---~-- 313 (472)
.++|+|||+|........ .....+..++.+|+. ..+.++.++||||+|+++++++++..+... .
T Consensus 187 ~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 255 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYK----------LRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI 255 (504)
T ss_dssp SEEECCCTTCEECCTTSC----------BCCCCSCTTTCCHHH-HTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred cEEEEECCCCEEcCCCCc----------cccccCCcCCCCHHH-hccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 699999999986543211 112234444445554 456799999999999999999997654311 0
Q ss_pred --hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 --EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 --~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++.++.++|.+||..+|.+|||+++-..
T Consensus 256 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 256 IKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 01 11468899999999999999999999988765
No 199
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.95 E-value=1.3e-28 Score=258.71 Aligned_cols=227 Identities=12% Similarity=0.113 Sum_probs=164.3
Q ss_pred eeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+. +|+.||||+++... .. .... ...+.+|..+|..+.|++
T Consensus 75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~--~~---------~~~~--------~~~~~~E~~il~~~~hp~ 135 (437)
T 4aw2_A 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--ML---------KRAE--------TACFREERDVLVNGDSKW 135 (437)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH--HH---------HTTT--------TCCHHHHHHHHHHSCTTT
T ss_pred heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH--hh---------hHHH--------HHHHHHHHHHHHhCCCCC
Confidence 4778899999999999999984 68899999986211 00 0000 012457899999998765
Q ss_pred CCcceeee----cCCceeEEeecCCCChhhhhcc---CCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 171 FPVPNAVD----CNRHCVIMSLVQGYPLVQVNQL---QNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 171 i~vP~~i~----~~~~~LVMEyi~G~~L~~l~~~---~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
+ +.++. .+..||||||++|++|..++.. ..+ ..++.+|+.+|.|||++|||||||||+||||+.++.
T Consensus 136 I--v~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~ 213 (437)
T 4aw2_A 136 I--TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH 213 (437)
T ss_dssp B--CCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred E--EEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCC
Confidence 3 33333 2668999999999999987643 122 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc-----cCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT-----DGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~-----~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
+||+|||+|+........ ....+.++..+++|+.+. ...++.++|+||||+++|+++++..++..
T Consensus 214 vkL~DFGla~~~~~~~~~--------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 214 IRLADFGSCLKLMEDGTV--------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp EEECCCTTCEECCTTSCE--------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred EEEcchhhhhhcccCCCc--------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999765432110 111223444444555443 46789999999999999999998654311
Q ss_pred -----hhh---------h--ccCCCHHHHHHHHHHHhcCccc--CCCCCCCCC
Q 012042 313 -----KEL---------A--ASGFTRKDQDVIQKFIGGSIEE--SGSDDEGSD 347 (472)
Q Consensus 313 -----~~~---------~--~~~~s~~~~~~l~k~l~~~p~~--R~s~~e~~~ 347 (472)
..+ . ...++.+.+++|.+||..+|+. |+++++-..
T Consensus 286 ~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 286 LVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 001 0 1348899999999999887776 887766554
No 200
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.95 E-value=7.9e-29 Score=248.43 Aligned_cols=225 Identities=12% Similarity=-0.001 Sum_probs=158.7
Q ss_pred eeecceecccCceeEEEEEe-CCCCE----EEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTV----LAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~----VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|.+.+.||+|+||.||+|.+ .+|+. ||+|.++..... .....+.+|+.+|.++.
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~ 75 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP---------------------KANKEILDEAYVMASVD 75 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------------------------CHHHHHHHHHHHHHCC
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCH---------------------HHHHHHHHHHHHHHhCC
Confidence 67789999999999999997 45654 577766422100 01123567999999999
Q ss_pred hCCCCcceeee---cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.+++ ....++||+|+.+++|.+++... . ...++.+|+.+|.|||++||+||||||.|||++.+
T Consensus 76 h~~i--v~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~ 153 (327)
T 3poz_A 76 NPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP 153 (327)
T ss_dssp BTTB--CCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred CCCE--eEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCC
Confidence 8753 44444 36688999999999998875421 1 23488999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---- 312 (472)
+.++|+|||+|.....+.... .......+..+++|+.+....++.++||||||+++|++++ +..+...
T Consensus 154 ~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 226 (327)
T 3poz_A 154 QHVKITDFGLAKLLGAEEKEY-------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226 (327)
T ss_dssp TEEEECCTTHHHHHTTTCC--------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred CCEEEccCcceeEccCCcccc-------cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH
Confidence 999999999997654322111 0011111222345555567889999999999999999998 5432210
Q ss_pred ---hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ---KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ---~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. .....++..+..+|.+|+..+|++||+..+..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 227 EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 113457888999999999999999999987654
No 201
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.95 E-value=1e-28 Score=249.87 Aligned_cols=226 Identities=10% Similarity=0.070 Sum_probs=159.7
Q ss_pred eeeecceecccCceeEEEEEeC---------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHH
Q 012042 92 FTAVGRQLGVGKESDIFEVARE---------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAF 162 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~---------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~ 162 (472)
-|.+.+.||+|+||.||+|.+. +++.||||++.... .+.+|+.+
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~---------------------------~~~~E~~~ 95 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDG---------------------------RLFNEQNF 95 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTS---------------------------THHHHHHH
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccc---------------------------hHHHHHHH
Confidence 4788899999999999999985 37899999986431 12246666
Q ss_pred HHHhhhCC-------------CCcceeeec-----CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHH
Q 012042 163 MKALEDHG-------------FPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVR 216 (472)
Q Consensus 163 L~~L~~~g-------------i~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~ 216 (472)
|.++.|++ ..+|.++++ ...+|||||+ |++|.+++... .+ ..++.||+.+|.|
T Consensus 96 l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~ 174 (352)
T 2jii_A 96 FQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEF 174 (352)
T ss_dssp HHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 66665422 123444432 4579999999 99999876432 11 2488999999999
Q ss_pred HHHCCceeccCCCCcEEEcCCC--cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchhee
Q 012042 217 LAEHGLIHCDFNEFNIMIDDDE--KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294 (472)
Q Consensus 217 LH~~GIIHrDLKP~NILl~~~g--~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiy 294 (472)
||++||+||||||.|||++.++ .++|+|||++............. ......+.+...+.+|+.+.+..++.++|||
T Consensus 175 LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 252 (352)
T 2jii_A 175 LHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYV--EGSRSPHEGDLEFISMDLHKGCGPSRRSDLQ 252 (352)
T ss_dssp HHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCC--TTSSCTTCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred HHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccccc--ccccccccCCccccCHHHHccCCCCchhhHH
Confidence 9999999999999999999887 89999999998654322111000 0011122333344456655667899999999
Q ss_pred ccCchhhhhhhccCCcchh-----hh-------h------------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 295 EGSRLSFASISKTAGFLDK-----EL-------A------------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 295 SlG~~~f~~~t~~~~~l~~-----~~-------~------------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
|||+++|+++++..+.... .+ . ...++.++.++|.+|+..+|++||++++..+
T Consensus 253 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 253 SLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 9999999999976432110 00 0 0246899999999999999999999887644
No 202
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.95 E-value=1.7e-28 Score=248.19 Aligned_cols=233 Identities=16% Similarity=0.127 Sum_probs=159.2
Q ss_pred eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
-|.+.+.||+|+||.||+|.+.+|+.||||++........... .+ ........+.+|+.+|.++.|+++
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~----~~-------~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVN----IL-------SDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEE----GG-------GSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhh----hh-------hhhhHHHHHHHHHHHHHhCCCcCc
Confidence 4778899999999999999998899999998864322111000 00 000112346789999999988763
Q ss_pred Ccceeeec---------CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 172 PVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 172 ~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
+.+++. ...|+||||++| +|.+.+... . ...++.+|+.+|.|||++||+||||||.|||++
T Consensus 92 --v~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 92 --LGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168 (362)
T ss_dssp --CCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred --cceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc
Confidence 222221 246899999996 554443221 1 124889999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
.++.++|+|||++........ .....+...+.+|+.+.. ..++.++||||||+++++++++..+....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADAN----------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp TTCCEEECCTTC-------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCCCEEEEecCcccccccccc----------cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999999999999974332211 111233333445554444 67899999999999999999975432110
Q ss_pred --------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 --------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 --------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++..+.++|.+||..+|++|||+++....
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 239 FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 01123567888999999999999999999887663
No 203
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.95 E-value=2.3e-28 Score=242.14 Aligned_cols=226 Identities=15% Similarity=0.056 Sum_probs=155.7
Q ss_pred eeeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+++.||+|+||.||+|... ++..||||+++........ ...+.+|+.+|.++.
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~e~~~l~~l~ 94 (313)
T 3brb_A 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE--------------------IEEFLSEAACMKDFS 94 (313)
T ss_dssp GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHH--------------------HHHHHHHHHHHHTCC
T ss_pred HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhH--------------------HHHHHHHHHHHhcCC
Confidence 3678899999999999999873 3458999998644322211 123557999999998
Q ss_pred hCCCCcceeeec---------CCceeEEeecCCCChhhhhcc--------CCh----HHHHHHHHHHHHHHHHCCceecc
Q 012042 168 DHGFPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQL--------QNP----DSVFETIIGLVVRLAEHGLIHCD 226 (472)
Q Consensus 168 ~~gi~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~--------~~~----~~i~~qIl~aL~~LH~~GIIHrD 226 (472)
|+++ ..++++ ...++||||++|++|..++.. ..+ ..++.+|+.+|.|||++||+|||
T Consensus 95 h~~i--v~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d 172 (313)
T 3brb_A 95 HPNV--IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRD 172 (313)
T ss_dssp CTTB--CCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CCCe--eeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 8663 333332 134999999999999887521 111 24889999999999999999999
Q ss_pred CCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-
Q 012042 227 FNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS- 305 (472)
Q Consensus 227 LKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t- 305 (472)
|||.|||++.++.++|+|||++.....+.... ...........++|+.+....++.++|+||||+++|++++
T Consensus 173 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 245 (313)
T 3brb_A 173 LAARNCMLRDDMTVCVADFGLSKKIYSGDYYR-------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245 (313)
T ss_dssp CSGGGEEECTTSCEEECSCSCC-----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcceEEEcCCCcEEEeecCcceecccccccC-------cccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhc
Confidence 99999999999999999999997653221100 0001111222335555566788999999999999999998
Q ss_pred ccCCcch---h-----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 306 KTAGFLD---K-----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 306 ~~~~~l~---~-----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+..+... . ......++..+.++|.+|+..+|.+|||+++..
T Consensus 246 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 300 (313)
T 3brb_A 246 GMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLR 300 (313)
T ss_dssp SCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred CCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 5432110 0 012356788999999999999999999987643
No 204
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.95 E-value=5.2e-29 Score=253.46 Aligned_cols=181 Identities=17% Similarity=0.180 Sum_probs=133.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.... ....+.+|+.+|.++.+.+.
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~E~~~l~~l~~~~~ 95 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEH-----------------------YTETALDEIRLLKSVRNSDP 95 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-----------------------HHHHHHHHHHHHHHHHHSCT
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCc-----------------------chHHHHHHHHHHHHHhhcCC
Confidence 77889999999999999998 5689999999863211 01235679999999986432
Q ss_pred C---cce---eeec--------CCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHC-CceeccCCC
Q 012042 172 P---VPN---AVDC--------NRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEH-GLIHCDFNE 229 (472)
Q Consensus 172 ~---vP~---~i~~--------~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~-GIIHrDLKP 229 (472)
. +|+ +++. ...||||||+.|..+..+.... . ...++.||+.+|.|||++ ||+||||||
T Consensus 96 ~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp 175 (397)
T 1wak_A 96 NDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP 175 (397)
T ss_dssp TCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSG
T ss_pred CCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence 2 222 3321 3578999999665555544321 1 234889999999999998 999999999
Q ss_pred CcEEEcCCC-------------------------------------------------cEEEEeCCCceecCcccchhhh
Q 012042 230 FNIMIDDDE-------------------------------------------------KVTMIDFPQMVSVSHQNAQMYF 260 (472)
Q Consensus 230 ~NILl~~~g-------------------------------------------------~vkIIDFG~A~~~~~p~a~~~l 260 (472)
.|||++.++ .++|+|||.|.......
T Consensus 176 ~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----- 250 (397)
T 1wak_A 176 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----- 250 (397)
T ss_dssp GGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----
T ss_pred HHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----
Confidence 999998765 79999999998653221
Q ss_pred ccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccC
Q 012042 261 DRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 261 ~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
....++..+.+|+.+....++.++||||||+++|+++++..
T Consensus 251 -------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~ 291 (397)
T 1wak_A 251 -------TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDY 291 (397)
T ss_dssp -------CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred -------ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCC
Confidence 11223334456665566779999999999999999999764
No 205
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.95 E-value=2.1e-28 Score=252.64 Aligned_cols=218 Identities=11% Similarity=0.102 Sum_probs=159.5
Q ss_pred eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
-|.+.+.||+|+||.||+|.+..+..||||.+..... + ..+|+.+|+.+.|+++
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-~-------------------------~~~E~~il~~l~h~ni 94 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-F-------------------------KNRELQIMRIVKHPNV 94 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-S-------------------------CCHHHHHHHTCCCTTB
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-h-------------------------HHHHHHHHHhCCCCCc
Confidence 4788999999999999999996666688887653211 0 1259999999988763
Q ss_pred Ccceeeec----C------CceeEEeecCCCChhhhhc-----cCC----hHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 172 PVPNAVDC----N------RHCVIMSLVQGYPLVQVNQ-----LQN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 172 ~vP~~i~~----~------~~~LVMEyi~G~~L~~l~~-----~~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
+.++++ + ..++||||+++..+..+.. ... ...++.||+.+|.|||++||+||||||.||
T Consensus 95 --v~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Ni 172 (394)
T 4e7w_A 95 --VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNL 172 (394)
T ss_dssp --CCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred --ceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHE
Confidence 333322 1 1679999999865443321 112 234788999999999999999999999999
Q ss_pred EEc-CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCc
Q 012042 233 MID-DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 233 Ll~-~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
|++ .++.++|+|||+|........ ...+.+..++.+|+.+.+ ..++.++||||+|+++++++++...+
T Consensus 173 ll~~~~~~~kL~DFG~a~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 242 (394)
T 4e7w_A 173 LLDPPSGVLKLIDFGSAKILIAGEP----------NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242 (394)
T ss_dssp EEETTTTEEEECCCTTCEECCTTCC----------CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EEcCCCCcEEEeeCCCcccccCCCC----------CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999 789999999999986532211 112334445556665433 46899999999999999999976433
Q ss_pred chh------------------------------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 LDK------------------------------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 l~~------------------------------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
... ......++.++.++|.+||..+|.+|||+.+...
T Consensus 243 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 243 PGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 110 0011247788999999999999999999988765
No 206
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.95 E-value=3.1e-28 Score=268.71 Aligned_cols=222 Identities=14% Similarity=0.110 Sum_probs=165.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++... .. ... .......|..+|..+.++..
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~--~~---------~~~--------~~~~~~~E~~~l~~~~~~~~ 403 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV--VI---------QDD--------DVECTMVEKRVLALPGKPPF 403 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHH--HH---------HTT--------TTHHHHHHHHHHTCTTCCTT
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccc--cc---------cHH--------HHHHHHHHHHHHHhccCCCe
Confidence 67789999999999999998 468999999986211 00 000 01234568888887754321
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
++.++.. +..||||||++|++|..++.. .. ...++.||+.+|.|||+.|||||||||+||||+.+|.++
T Consensus 404 -i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ik 482 (674)
T 3pfq_A 404 -LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIK 482 (674)
T ss_dssp -BCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEE
T ss_pred -EEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEE
Confidence 2333332 568999999999999887642 11 224789999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-------hh
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD-------KE 314 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-------~~ 314 (472)
|+|||+|+....+.. ....+.++..+++|+.+....++.++|+||||+++|+++++..++.. ..
T Consensus 483 L~DFGla~~~~~~~~---------~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~ 553 (674)
T 3pfq_A 483 IADFGMCKENIWDGV---------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553 (674)
T ss_dssp ECCCTTCEECCCTTC---------CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EeecceeeccccCCc---------ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 999999985432211 12233455555677766778899999999999999999998654321 01
Q ss_pred h------hccCCCHHHHHHHHHHHhcCcccCCCCC
Q 012042 315 L------AASGFTRKDQDVIQKFIGGSIEESGSDD 343 (472)
Q Consensus 315 ~------~~~~~s~~~~~~l~k~l~~~p~~R~s~~ 343 (472)
+ .+..++.++.++|.+||..+|++|++..
T Consensus 554 i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 588 (674)
T 3pfq_A 554 IMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCG 588 (674)
T ss_dssp HHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCS
T ss_pred HHhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCC
Confidence 1 1356889999999999999999999984
No 207
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.95 E-value=1.7e-28 Score=239.56 Aligned_cols=222 Identities=14% Similarity=0.069 Sum_probs=147.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|++.+.||+|+||.||+|.+ .+|+.||||+++.....-.. ......+...+..+.|+++
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~h~~i 68 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ--------------------KRLLMDLDISMRTVDCPFT 68 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHH--------------------HHHHHHHHHHHTTCCCTTB
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHH--------------------HHHHHHHHHHHHhCCCCeE
Confidence 67789999999999999998 57999999998643211110 0112233444555665542
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHC-CceeccCCCCcEEEcC
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEH-GLIHCDFNEFNIMIDD 236 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~-GIIHrDLKP~NILl~~ 236 (472)
+.+++. +..++||||++| +|.+++.. ..+ ..++.+|+.+|.|||+. ||+||||||.|||++.
T Consensus 69 --v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~ 145 (290)
T 3fme_A 69 --VTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 145 (290)
T ss_dssp --CCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT
T ss_pred --EEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC
Confidence 333332 678999999986 55444311 112 24889999999999997 9999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc----ccCCCCcchheeccCchhhhhhhccCCcch
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET----TDGDDGSDIDTDEGSRLSFASISKTAGFLD 312 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~----~~~~~~~~sDiySlG~~~f~~~t~~~~~l~ 312 (472)
++.++|+|||.+.......... ...+.....+|+.+ ....++.++|+||||+++++++++..+...
T Consensus 146 ~~~~kl~Dfg~~~~~~~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 146 LGQVKMCDFGISGYLVDDVAKD----------IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp TCCEEBCCC-------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred CCCEEEeecCCccccccccccc----------ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 9999999999997553321110 11222233345442 356789999999999999999997643211
Q ss_pred ---------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ---------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ---------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ......++..+.++|.+|+..+|++|||+++-.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 216 WGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 1112468899999999999999999999987765
No 208
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=5.7e-29 Score=256.60 Aligned_cols=224 Identities=17% Similarity=0.218 Sum_probs=160.9
Q ss_pred ceeeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~ 169 (472)
-.|.+.+.||+|+||.||+|.+. +|+.||||+++... +.. ......+|+.+|.++.|+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~-------------------~~~~~~~E~~~l~~l~hp 67 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLR-------------------PVDVQMREFEVLKKLNHK 67 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG--GGS-------------------CHHHHHHHHHHHHHCCCT
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc--ccc-------------------hHHHHHHHHHHHHhcCCC
Confidence 35888999999999999999994 69999999986321 100 011345799999999887
Q ss_pred CCCcceeeec------CCceeEEeecCCCChhhhhccC-----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 012042 170 GFPVPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ-----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMI 234 (472)
Q Consensus 170 gi~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~-----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl 234 (472)
++ +.+++. ...++||||++|++|.+++... .+ ..++.+|+.+|.|||++||+||||||.|||+
T Consensus 68 nI--v~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 145 (396)
T 4eut_A 68 NI--VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145 (396)
T ss_dssp TB--CCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred CC--CeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEE
Confidence 53 444432 2569999999999998876431 12 2478999999999999999999999999999
Q ss_pred ----cCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--------CCCCcchheeccCchhhh
Q 012042 235 ----DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--------GDDGSDIDTDEGSRLSFA 302 (472)
Q Consensus 235 ----~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--------~~~~~~sDiySlG~~~f~ 302 (472)
+.++.++|+|||.+........ ....++...+.+|+.+.. ..++.++||||||+++|+
T Consensus 146 ~~~~~~~~~~kL~DFG~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~e 215 (396)
T 4eut_A 146 VIGEDGQSVYKLTDFGAARELEDDEQ----------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215 (396)
T ss_dssp EECTTSCEEEEECCGGGCEECCCGGG----------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCceeEEEecCCCceEccCCCc----------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHH
Confidence 6667799999999986543211 111233333345554322 467889999999999999
Q ss_pred hhhccCCcch-------h----hhh-------------------------------ccCCCHHHHHHHHHHHhcCcccCC
Q 012042 303 SISKTAGFLD-------K----ELA-------------------------------ASGFTRKDQDVIQKFIGGSIEESG 340 (472)
Q Consensus 303 ~~t~~~~~l~-------~----~~~-------------------------------~~~~s~~~~~~l~k~l~~~p~~R~ 340 (472)
++++..++.. . .+. ...++..+..+|.+|++.+|++||
T Consensus 216 l~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~ 295 (396)
T 4eut_A 216 AATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCW 295 (396)
T ss_dssp HHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSC
T ss_pred HHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhc
Confidence 9997543210 0 000 012334567899999999999999
Q ss_pred CCCCCCC
Q 012042 341 SDDEGSD 347 (472)
Q Consensus 341 s~~e~~~ 347 (472)
++++-.+
T Consensus 296 s~~e~l~ 302 (396)
T 4eut_A 296 GFDQFFA 302 (396)
T ss_dssp CHHHHHH
T ss_pred cHHHHHH
Confidence 9987533
No 209
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.4e-28 Score=245.71 Aligned_cols=227 Identities=11% Similarity=0.065 Sum_probs=159.1
Q ss_pred eeeecceecccCceeEEEEEeC-C----CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE-D----GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~-~----g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
-|.+.+.||+|+||.||+|.+. + +..||||+++...... .+..+.+|+.+|.++
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l 103 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK---------------------QRVDFLGEAGIMGQF 103 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHH---------------------HHHHHHHHHHHHHTC
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHH---------------------HHHHHHHHHHHHHhC
Confidence 3567799999999999999873 2 2359999986432111 112356799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID 235 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~ 235 (472)
.|+++ +.+++. +..+|||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++
T Consensus 104 ~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~ 181 (333)
T 1mqb_A 104 SHHNI--IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN 181 (333)
T ss_dssp CCTTB--CCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred CCCCC--CcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC
Confidence 88653 444443 6689999999999998876422 1 124789999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch--
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD-- 312 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~-- 312 (472)
.++.++|+|||.+............ ...........+|+.+....++.++||||||++++++++ +..+...
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~ 255 (333)
T 1mqb_A 182 SNLVCKVSDFGLSRVLEDDPEATYT------TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 255 (333)
T ss_dssp TTCCEEECCCCC-----------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CCCcEEECCCCcchhhccccccccc------cCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999765432111100 000011112345555556789999999999999999988 5533211
Q ss_pred -----hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -----KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -----~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. .....++..+.++|.+|++.+|++||+..+..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 256 NHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 013457889999999999999999999877644
No 210
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.95 E-value=1.5e-28 Score=246.81 Aligned_cols=225 Identities=12% Similarity=0.000 Sum_probs=157.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEE----EEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVL----AMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~V----AVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
|.+.+.||+|+||.||+|.+ .+++.| |+|.++...... ....+.+|+.+|.++.
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~ 75 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK---------------------ANKEILDEAYVMASVD 75 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCC---------------------CHHHHHHHHHHHTTCC
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHH---------------------HHHHHHHHHHHHHhCC
Confidence 67789999999999999997 456654 666654221100 0123557999999998
Q ss_pred hCCCCcceeee---cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.+++ ....+++|+|+.+++|.+++... . ...++.||+.+|.|||++||+||||||.|||++.+
T Consensus 76 hp~i--v~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~ 153 (327)
T 3lzb_A 76 NPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP 153 (327)
T ss_dssp BTTB--CCCCEEEESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred CCCe--eEEEEEEecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC
Confidence 8753 33333 36688999999999998875321 1 12478999999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---- 312 (472)
+.++|+|||++.....+..... ......+..+++|+.+....++.++||||||+++|++++ +..+...
T Consensus 154 ~~~kL~DfG~a~~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~ 226 (327)
T 3lzb_A 154 QHVKITDFGLAKLLGAEEKEYH-------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226 (327)
T ss_dssp TEEEECCTTC-----------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred CCEEEccCcceeEccCcccccc-------ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence 9999999999986543221110 011111222345555567889999999999999999998 5432211
Q ss_pred ---h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 ---K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ---~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. ......++..+..+|.+|+..+|.+||++++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 227 EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 0 0113457888999999999999999999988765
No 211
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.95 E-value=2.9e-28 Score=243.93 Aligned_cols=221 Identities=15% Similarity=0.096 Sum_probs=157.7
Q ss_pred eeecceecccCceeEEEEEeC-CC-CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DG-TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g-~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+. ++ +.||||+++.... ....+.+|+.+|.++.+.+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~E~~~l~~l~~~~ 77 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK-----------------------YREAARLEINVLKKIKEKD 77 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHH-----------------------HHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccccc-----------------------chhHHHHHHHHHHHHhhcC
Confidence 678899999999999999984 45 6899999863210 0123557999999998754
Q ss_pred C-C---cceeee----cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEE-
Q 012042 171 F-P---VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI- 234 (472)
Q Consensus 171 i-~---vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl- 234 (472)
. . +...+. .+..+|||||+.|..+..+.... . ...++.||+.+|.|||++||+||||||.|||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~ 157 (355)
T 2eu9_A 78 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 157 (355)
T ss_dssp TTSCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEES
T ss_pred CCCceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe
Confidence 2 1 222222 26689999999665554443221 1 22488999999999999999999999999999
Q ss_pred ------------------cCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheecc
Q 012042 235 ------------------DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEG 296 (472)
Q Consensus 235 ------------------~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySl 296 (472)
+.++.++|+|||++....... ....++..+.+|+.+....++.++|+|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 225 (355)
T 2eu9_A 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH------------TTIVATRHYRPPEVILELGWAQPCDVWSI 225 (355)
T ss_dssp CCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC------------CSSCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred cccccccccccccccccccCCCcEEEeecCccccccccc------------cCCcCCCcccCCeeeecCCCCCccchHHH
Confidence 567889999999997543221 11223333445665567789999999999
Q ss_pred CchhhhhhhccCCcchh---h-------hh-----------------------------------------------ccC
Q 012042 297 SRLSFASISKTAGFLDK---E-------LA-----------------------------------------------ASG 319 (472)
Q Consensus 297 G~~~f~~~t~~~~~l~~---~-------~~-----------------------------------------------~~~ 319 (472)
|+++|+++++..+.... . +. ...
T Consensus 226 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 2eu9_A 226 GCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305 (355)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccch
Confidence 99999999976432110 0 00 000
Q ss_pred CCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 320 FTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 320 ~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.+..+.++|.+||+.+|++|||+++....
T Consensus 306 ~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 306 EHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 12367799999999999999999887663
No 212
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.95 E-value=1.5e-28 Score=239.45 Aligned_cols=215 Identities=13% Similarity=0.058 Sum_probs=157.0
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+. |+.||||+++.... ...+.+|+.++.++.|+++
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~------------------------~~~~~~E~~~l~~l~h~~i- 76 (278)
T 1byg_A 23 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT------------------------AQAFLAEASVMTQLRHSNL- 76 (278)
T ss_dssp EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--------------------------HHHHHTHHHHTTCCCTTB-
T ss_pred ceEEeEEecCCCceEEEEEEc-CCEEEEEEecchhH------------------------HHHHHHHHHHHHhCCCCCE-
Confidence 677899999999999999874 88999999864320 0134579999999988653
Q ss_pred cceeeec-----CCceeEEeecCCCChhhhhccC-----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 173 VPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ-----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 173 vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~-----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
..+++. +..++||||++|++|.+++... . ...++.+++.+|.+||++||+||||||.||+++.++.
T Consensus 77 -v~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~ 155 (278)
T 1byg_A 77 -VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 155 (278)
T ss_dssp -CCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC
T ss_pred -eeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCc
Confidence 333332 4679999999999998876421 1 1247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD------ 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~------ 312 (472)
++|+|||.+.....+.. .........+|+.+....++.++|+||||++++++++ +..+...
T Consensus 156 ~~l~Dfg~~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~ 223 (278)
T 1byg_A 156 AKVSDFGLTKEASSTQD------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV 223 (278)
T ss_dssp EEECCCCC------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH
T ss_pred EEEeecccccccccccc------------CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999875432211 0011222345555556788999999999999999998 5432210
Q ss_pred -hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 -KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 -~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.. .....++..+.++|.+|+..+|++|||..+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 265 (278)
T 1byg_A 224 VPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLR 265 (278)
T ss_dssp HHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence 00 11356788999999999999999999987653
No 213
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.95 E-value=4e-28 Score=254.88 Aligned_cols=215 Identities=13% Similarity=0.071 Sum_probs=161.5
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|... |+.||||+++.... . ..+.+|+.+|.+|.|+++
T Consensus 195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~-~-----------------------~~~~~E~~~l~~l~h~ni- 248 (450)
T 1k9a_A 195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-A-----------------------QAFLAEASVMTQLRHSNL- 248 (450)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTT-S-----------------------HHHHHHHHHHHTCCCTTB-
T ss_pred eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchH-H-----------------------HHHHHHHHHHHhccCCCE-
Confidence 677899999999999999875 78999999864320 0 134579999999988763
Q ss_pred cceeeec-----CCceeEEeecCCCChhhhhccC-----Ch---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCc
Q 012042 173 VPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ-----NP---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 173 vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~-----~~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~ 239 (472)
..+++. +..+|||||++|++|.+++... .. ..++.+|+.+|.|||++||+||||||.|||++.++.
T Consensus 249 -v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~ 327 (450)
T 1k9a_A 249 -VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 327 (450)
T ss_dssp -CCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSC
T ss_pred -EEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCC
Confidence 333332 3679999999999998876421 11 247889999999999999999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch------
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD------ 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~------ 312 (472)
+||+|||++........ ....+...++|+.+....++.++||||||++++++++ +..+...
T Consensus 328 ~kl~DfG~a~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~ 395 (450)
T 1k9a_A 328 AKVSDFGLTKEASSTQD------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV 395 (450)
T ss_dssp EEECCCTTCEECC------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH
T ss_pred EEEeeCCCccccccccc------------CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999975432110 0011122345555567789999999999999999998 5432210
Q ss_pred -hhh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 -KEL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 -~~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
..+ .+.+++..+.++|.+|+..+|++|||..+..
T Consensus 396 ~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~ 437 (450)
T 1k9a_A 396 VPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLR 437 (450)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 001 1356788999999999999999999987653
No 214
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.1e-28 Score=251.27 Aligned_cols=230 Identities=14% Similarity=0.030 Sum_probs=157.3
Q ss_pred CceeeecceecccCceeEEEEEeC--CC--CEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH
Q 012042 90 GVFTAVGRQLGVGKESDIFEVARE--DG--TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA 165 (472)
Q Consensus 90 ~~i~~i~~~IG~G~fg~VY~a~~~--~g--~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~ 165 (472)
...|.+.+.||+|+||.||+|... ++ ..||||.++...... ....+.+|+.+|.+
T Consensus 88 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~il~~ 146 (373)
T 3c1x_A 88 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG---------------------EVSQFLTEGIIMKD 146 (373)
T ss_dssp TEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSH---------------------HHHHHHHHHTTSTT
T ss_pred hceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHH---------------------HHHHHHHHHHHHHh
Confidence 346788899999999999999873 22 368999875321110 01235679999999
Q ss_pred hhhCCCCcceeeec-----CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 166 LEDHGFPVPNAVDC-----NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 166 L~~~gi~vP~~i~~-----~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
+.|+++ ..+++. +..++||||++|++|.+++... .+ ..++.||+.+|.|||++||+||||||.|||
T Consensus 147 l~hpnI--v~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 224 (373)
T 3c1x_A 147 FSHPNV--LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 224 (373)
T ss_dssp CCCTTB--CCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred CCCCCc--ceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEE
Confidence 988764 333321 4679999999999999986432 11 247789999999999999999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhc-cCCcc-
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISK-TAGFL- 311 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~-~~~~l- 311 (472)
++.++.++|+|||++.......... .........+...++|+.+....++.++||||||+++|+++++ ..+..
T Consensus 225 l~~~~~~kL~DFG~a~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~ 299 (373)
T 3c1x_A 225 LDEKFTVKVADFGLARDMYDKEFDS-----VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299 (373)
T ss_dssp ECTTCCEEECCC--------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred ECCCCCEEEeecccccccccccccc-----ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence 9999999999999997653221110 0011111222223455555568899999999999999999994 32111
Q ss_pred ----hh---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 ----DK---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ----~~---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+. ...+..++..+.++|.+|+..+|++|||.++..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 300 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp SCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 0123457889999999999999999999987654
No 215
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=2.8e-28 Score=238.55 Aligned_cols=218 Identities=13% Similarity=0.103 Sum_probs=159.4
Q ss_pred ceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..||+|+||.||+|.+ .+++.||||++....... ...+.+|+.++..+.|+++ +.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~~~e~~~l~~l~h~~i--v~ 83 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY----------------------SQPLHEEIALHKHLKHKNI--VQ 83 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-------------------------HHHHHHHHHHHTCCCTTB--CC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHH----------------------HHHHHHHHHHHHhCCCCCE--ee
Confidence 4899999999999998 578999999986432211 1135579999999988653 44
Q ss_pred eeec----CCceeEEeecCCCChhhhhccC-----C-h---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-CCcEE
Q 012042 176 AVDC----NRHCVIMSLVQGYPLVQVNQLQ-----N-P---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-DEKVT 241 (472)
Q Consensus 176 ~i~~----~~~~LVMEyi~G~~L~~l~~~~-----~-~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-~g~vk 241 (472)
+++. +..++||||++|++|..++... . . ..++.+|+.+|.+||++||+||||||.|||++. ++.++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~k 163 (295)
T 2clq_A 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLK 163 (295)
T ss_dssp EEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEE
T ss_pred EeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEE
Confidence 4432 5679999999999998876422 1 1 236789999999999999999999999999987 88999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--CCCCcchheeccCchhhhhhhccCCcchh------
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLDK------ 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~~------ 313 (472)
|+|||.+......... ...+.+.....+|+.+.. ..++.++|+||||+++++++++..+....
T Consensus 164 l~Dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 234 (295)
T 2clq_A 164 ISDFGTSKRLAGINPC---------TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234 (295)
T ss_dssp ECCTTTCEESCC--------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH
T ss_pred EeecccccccCCCCCc---------ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH
Confidence 9999999865422110 011122223334444322 23789999999999999999976433110
Q ss_pred ----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
......++.++.++|.+|+..+|++||++++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 235 MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0113567889999999999999999999987655
No 216
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.95 E-value=3.2e-28 Score=253.48 Aligned_cols=217 Identities=12% Similarity=0.110 Sum_probs=157.8
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||++...... ..+|+.+|.+|.|++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------------~~~E~~il~~l~hpn 108 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--------------------------KNRELQIMRKLDHCN 108 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS--------------------------CCHHHHHHHTCCCTT
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh--------------------------HHHHHHHHHHcCCCC
Confidence 578889999999999999999 46999999988643211 125999999998876
Q ss_pred CCcceeeec----------CCceeEEeecCCCChhhhhc------cCC----hHHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 171 FPVPNAVDC----------NRHCVIMSLVQGYPLVQVNQ------LQN----PDSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 171 i~vP~~i~~----------~~~~LVMEyi~G~~L~~l~~------~~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
+ ..++.+ ...++||||+++. |..++. ... ...++.||+.+|.|||++||+||||||.
T Consensus 109 i--v~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~ 185 (420)
T 1j1b_A 109 I--VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQ 185 (420)
T ss_dssp B--CCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGG
T ss_pred c--cceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChh
Confidence 4 332221 1257899999974 333221 111 2347899999999999999999999999
Q ss_pred cEEEcCC-CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccC
Q 012042 231 NIMIDDD-EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTA 308 (472)
Q Consensus 231 NILl~~~-g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~ 308 (472)
||||+.+ +.+||+|||+++....... ...+.+..++++|+.+.+ ..++.++||||||+++|+++++..
T Consensus 186 NILl~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~ 255 (420)
T 1j1b_A 186 NLLLDPDTAVLKLCDFGSAKQLVRGEP----------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255 (420)
T ss_dssp GEEEETTTTEEEECCCTTCEECCTTCC----------CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred hEEEeCCCCeEEeccchhhhhcccCCC----------ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCC
Confidence 9999954 5689999999986532111 112344445556665433 478999999999999999999864
Q ss_pred Ccchh--------h----------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 309 GFLDK--------E----------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 309 ~~l~~--------~----------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
.+... . +....++.++.++|.+||..+|.+||++.+-.
T Consensus 256 pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l 335 (420)
T 1j1b_A 256 IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335 (420)
T ss_dssp SSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHh
Confidence 32110 0 01124577889999999999999999998765
Q ss_pred C
Q 012042 347 D 347 (472)
Q Consensus 347 ~ 347 (472)
.
T Consensus 336 ~ 336 (420)
T 1j1b_A 336 A 336 (420)
T ss_dssp T
T ss_pred C
Confidence 5
No 217
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.95 E-value=2.9e-28 Score=243.45 Aligned_cols=225 Identities=14% Similarity=0.013 Sum_probs=158.8
Q ss_pred eeecceecccCceeEEEEEe------CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 93 TAVGRQLGVGKESDIFEVAR------EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~------~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
|.+.+.||+|+||.||+|.+ .+++.||||++....... ....+.+|+.+|.++
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l 90 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---------------------DELDFLMEALIISKF 90 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHH---------------------HHHHHHHHHHHHHHC
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchh---------------------hHHHHHHHHHHHhhC
Confidence 57789999999999999983 357899999986322111 012355799999999
Q ss_pred hhCCCCcceeeec----CCceeEEeecCCCChhhhhccC---------C----hHHHHHHHHHHHHHHHHCCceeccCCC
Q 012042 167 EDHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---------N----PDSVFETIIGLVVRLAEHGLIHCDFNE 229 (472)
Q Consensus 167 ~~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---------~----~~~i~~qIl~aL~~LH~~GIIHrDLKP 229 (472)
.|+++ +.+++. ...+|||||++|++|.+++... . ...++.+|+.+|.+||++||+||||||
T Consensus 91 ~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp 168 (327)
T 2yfx_A 91 NHQNI--VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168 (327)
T ss_dssp CCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred CCCCC--CeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCH
Confidence 87653 444443 5679999999999998876422 1 124788999999999999999999999
Q ss_pred CcEEEcC---CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-
Q 012042 230 FNIMIDD---DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS- 305 (472)
Q Consensus 230 ~NILl~~---~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t- 305 (472)
.|||++. +..++|+|||.+.......... ......+...+.+|+.+....++.++||||||++++++++
T Consensus 169 ~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 241 (327)
T 2yfx_A 169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYR-------KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241 (327)
T ss_dssp GGEEESCSSTTCCEEECCCHHHHHHHC-------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred hHEEEecCCCcceEEECccccccccccccccc-------cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcC
Confidence 9999984 4459999999987442211100 0011122223345555556789999999999999999998
Q ss_pred ccCCcch---h----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 306 KTAGFLD---K----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 306 ~~~~~l~---~----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+..+... . . .....++..+.++|.+|+..+|.+||++++..+
T Consensus 242 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 297 (327)
T 2yfx_A 242 GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297 (327)
T ss_dssp SCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 5432211 0 0 113467889999999999999999999987665
No 218
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.95 E-value=5.6e-29 Score=244.08 Aligned_cols=230 Identities=13% Similarity=0.118 Sum_probs=150.8
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||++......- ....+.+|+.++.++.|++
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~e~~~l~~l~h~~ 74 (303)
T 2vwi_A 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT---------------------SMDELLKEIQAMSQCHHPN 74 (303)
T ss_dssp CCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------------------------CCCCCCCTT
T ss_pred hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcch---------------------hHHHHHHHHHHHhhcCCCC
Confidence 467789999999999999998 478999999875321100 0113457888898888765
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc-----------CC---hHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL-----------QN---PDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~-----------~~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
+ +.+++. +..++||||++|++|.+++.. .. ...++.+|+.+|.+||++||+||||||.||
T Consensus 75 i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Ni 152 (303)
T 2vwi_A 75 I--VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNI 152 (303)
T ss_dssp B--CCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGE
T ss_pred E--eeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhE
Confidence 3 444432 678999999999999887531 11 124789999999999999999999999999
Q ss_pred EEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhccCCcc
Q 012042 233 MIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 233 Ll~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
|++.++.++|+|||++.......... +. .....+.+.....+|+.+.. ..++.++|+||||+++++++++..+..
T Consensus 153 l~~~~~~~kl~dfg~~~~~~~~~~~~---~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 228 (303)
T 2vwi_A 153 LLGEDGSVQIADFGVSAFLATGGDIT---RN-KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 228 (303)
T ss_dssp EECTTCCEEECCCHHHHHCC-------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEcCCCCEEEEeccchheeccCCCcc---ch-hhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999987543221100 00 00111223333344544322 568999999999999999999754321
Q ss_pred hh-----------------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 312 DK-----------------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 312 ~~-----------------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.. ......++..+.++|.+|+..+|.+||++++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 229 KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 00114577889999999999999999999887653
No 219
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.95 E-value=8.4e-28 Score=238.40 Aligned_cols=231 Identities=16% Similarity=0.176 Sum_probs=161.7
Q ss_pred hCCceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 88 NRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 88 ~~~~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
..+-.|.+.+.||+|+||.||+|.+.+|+.||||++......... ...+.+|+.+|.++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~ 84 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT--------------------LDSYRNEIAYLNKLQ 84 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHH--------------------HHHHHHHHHHHHHHG
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccc--------------------hHHHHHHHHHHHhcc
Confidence 345568889999999999999999988999999998754322111 123568999999998
Q ss_pred hCCCCcceeeec----CCceeEEeecCCCChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+..-.++.++++ ...++||| +.+++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++ +
T Consensus 85 ~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~ 162 (313)
T 3cek_A 85 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-D 162 (313)
T ss_dssp GGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-T
T ss_pred ccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-C
Confidence 632234444443 56789999 5677888775422 1 234789999999999999999999999999997 4
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-----------CCCCcchheeccCchhhhhhhc
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-----------GDDGSDIDTDEGSRLSFASISK 306 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-----------~~~~~~sDiySlG~~~f~~~t~ 306 (472)
+.++|+|||++........... .....+...+++|+.+.. ..++.++||||||+++++++++
T Consensus 163 ~~~kL~Dfg~~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g 235 (313)
T 3cek_A 163 GMLKLIDFGIANQMQPDTTSVV-------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235 (313)
T ss_dssp TEEEECCCSSSCC---------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHS
T ss_pred CeEEEeeccccccccCcccccc-------ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhC
Confidence 8899999999976532211000 011122333334444322 4788999999999999999998
Q ss_pred cCCcch---h-----h--------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 307 TAGFLD---K-----E--------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 307 ~~~~l~---~-----~--------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+... . . ......+.++.++|.+|+..+|.+|||+++...
T Consensus 236 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 236 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp SCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 643211 0 0 012345778999999999999999999987655
No 220
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.95 E-value=4e-28 Score=243.48 Aligned_cols=221 Identities=15% Similarity=0.084 Sum_probs=157.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHH-HHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAF-MKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~-L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++........ .....|..+ +..+.|++
T Consensus 53 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~---------------------~~~~~e~~~~~~~~~h~~ 111 (340)
T 3an0_A 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ---------------------KRLLMDLDISMRTVDCPF 111 (340)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHH---------------------HHHHHHHHHHHTTCCCTT
T ss_pred eeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHH---------------------HHHHHHHHHHHhhcCCCc
Confidence 67789999999999999998 57999999998754221110 112345444 55566654
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhcc------CCh----HHHHHHHHHHHHHHHHC-CceeccCCCCcEEEc
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQL------QNP----DSVFETIIGLVVRLAEH-GLIHCDFNEFNIMID 235 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~------~~~----~~i~~qIl~aL~~LH~~-GIIHrDLKP~NILl~ 235 (472)
+ +.+++. +..+|||||++| +|.+++.. ..+ ..++.||+.+|.|||+. ||+||||||.|||++
T Consensus 112 i--v~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~ 188 (340)
T 3an0_A 112 T--VTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN 188 (340)
T ss_dssp T--CCEEEEEECSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEEC
T ss_pred E--EEEeeEEEeCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC
Confidence 3 344432 678999999987 77665421 112 24889999999999986 999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc----ccCCCCcchheeccCchhhhhhhccCCcc
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET----TDGDDGSDIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~----~~~~~~~~sDiySlG~~~f~~~t~~~~~l 311 (472)
.++.++|+|||++........ .....+...+++|+.+ ....++.++||||||+++|+++++..+..
T Consensus 189 ~~~~~kl~Dfg~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~ 258 (340)
T 3an0_A 189 ALGQVKMCDFGISGYLVDSVA----------KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258 (340)
T ss_dssp STTCEEECCCSHHHHHSCHHH----------HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred CCCCEEEeeCCCceecccccc----------cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 999999999999875432111 1111233333455542 23468999999999999999999764321
Q ss_pred h---------h-------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 312 D---------K-------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 312 ~---------~-------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. . ......++.++.++|.+|+..+|++||+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 259 SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1 0 0112357889999999999999999999988776
No 221
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.95 E-value=2.5e-28 Score=252.07 Aligned_cols=226 Identities=13% Similarity=0.110 Sum_probs=148.6
Q ss_pred eee-cceecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 93 TAV-GRQLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 93 ~~i-~~~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
|.+ +++||+|+||.||+|.+. +++.||||++...... ..+.+|+.+|.+|.|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~------------------------~~~~~E~~~l~~l~h 77 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS------------------------MSACREIALLRELKH 77 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC------------------------HHHHHHHHHHHHCCC
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC------------------------HHHHHHHHHHHhcCC
Confidence 444 578999999999999964 5889999988632211 124579999999998
Q ss_pred CCCCcce-eee---cCCceeEEeecCCCChhhhhcc-----------CC----hHHHHHHHHHHHHHHHHCCceeccCCC
Q 012042 169 HGFPVPN-AVD---CNRHCVIMSLVQGYPLVQVNQL-----------QN----PDSVFETIIGLVVRLAEHGLIHCDFNE 229 (472)
Q Consensus 169 ~gi~vP~-~i~---~~~~~LVMEyi~G~~L~~l~~~-----------~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP 229 (472)
+++.... .+. ....||||||++| +|..++.. .. ...++.||+.+|.|||++||+||||||
T Consensus 78 pniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp 156 (405)
T 3rgf_A 78 PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKP 156 (405)
T ss_dssp TTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred CCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCH
Confidence 7642221 111 2457999999986 45443320 01 234889999999999999999999999
Q ss_pred CcEEE----cCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhh
Q 012042 230 FNIMI----DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASI 304 (472)
Q Consensus 230 ~NILl----~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~ 304 (472)
.|||| +.++.++|+|||+|.....+... ......+.++..+.+|+.+.. ..++.++||||||+++|+++
T Consensus 157 ~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 230 (405)
T 3rgf_A 157 ANILVMGEGPERGRVKIADMGFARLFNSPLKP------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230 (405)
T ss_dssp GGEEECCSSTTTTCEEECCTTCCC----------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred HHeEEecCCCCCCcEEEEECCCceecCCCCcc------cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHH
Confidence 99999 66789999999999865432111 011222334444456665544 56899999999999999999
Q ss_pred hccCCcchh-----------------h--------------h-----------------------------hccCCCHHH
Q 012042 305 SKTAGFLDK-----------------E--------------L-----------------------------AASGFTRKD 324 (472)
Q Consensus 305 t~~~~~l~~-----------------~--------------~-----------------------------~~~~~s~~~ 324 (472)
++...+... . + .....+..+
T Consensus 231 ~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (405)
T 3rgf_A 231 TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKA 310 (405)
T ss_dssp HSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHH
T ss_pred hCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHH
Confidence 975432100 0 0 000115677
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 325 QDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 325 ~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
.++|.+||..+|.+|||+++-.+..
T Consensus 311 ~~Ll~~~L~~dP~~R~ta~e~L~hp 335 (405)
T 3rgf_A 311 FHLLQKLLTMDPIKRITSEQAMQDP 335 (405)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHccCCcccCCCHHHHhcCh
Confidence 8999999999999999998877643
No 222
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.95 E-value=2.2e-28 Score=262.67 Aligned_cols=222 Identities=14% Similarity=0.065 Sum_probs=164.5
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
+.+.+.||+|+||.||+|.+..+..||||+++...... ..+.+|+.+|.+|.|+++
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~E~~~l~~l~hpni- 324 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-----------------------EAFLQEAQVMKKLRHEKL- 324 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCH-----------------------HHHHHHHHHHHHCCCTTB-
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCH-----------------------HHHHHHHHHHHhCCCCCE-
Confidence 56778999999999999999777789999987543211 134579999999988763
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC-----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ-----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~-----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
..+++ ....+|||||++|++|.+++... . ...++.+|+.+|.|||++|||||||||.||||+.++.+|
T Consensus 325 -v~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~k 403 (535)
T 2h8h_A 325 -VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 403 (535)
T ss_dssp -CCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred -eeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEE
Confidence 33333 26789999999999998876421 1 124789999999999999999999999999999999999
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h----
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K---- 313 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~---- 313 (472)
|+|||++....... +..+ .........++|+.+....++.++||||||++++++++ +..+... .
T Consensus 404 l~DFG~a~~~~~~~---~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~ 475 (535)
T 2h8h_A 404 VADFGLARLIEDNE---YTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 475 (535)
T ss_dssp ECCTTSTTTCCCHH---HHTT-----CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHH
T ss_pred EcccccceecCCCc---eecc-----cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999997543210 0000 00011112235554556789999999999999999998 5432210 0
Q ss_pred hh-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 EL-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ~~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++..+.++|.+|+..+|++|||.++..+
T Consensus 476 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 516 (535)
T 2h8h_A 476 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 516 (535)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 01 13467888999999999999999999886543
No 223
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.95 E-value=4.3e-28 Score=240.86 Aligned_cols=223 Identities=14% Similarity=0.154 Sum_probs=160.7
Q ss_pred eeecceecccCceeEEEEEe--CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh---h
Q 012042 93 TAVGRQLGVGKESDIFEVAR--EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL---E 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~--~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L---~ 167 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++......... ..+.+|+.++..+ .
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~--------------------~~~~~e~~~l~~l~~~~ 72 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMP--------------------LSTIREVAVLRHLETFE 72 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCB--------------------CTHHHHHHHHHHHHHTC
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCC--------------------chhhHHHHHHHhhhccC
Confidence 77889999999999999998 358899999986432111000 0133577777777 4
Q ss_pred hCCCCcceeeec---------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCC
Q 012042 168 DHGFPVPNAVDC---------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEF 230 (472)
Q Consensus 168 ~~gi~vP~~i~~---------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~ 230 (472)
|+++ +.+++. ...++||||++| +|.+++... .+ ..++.+|+.+|.+||++||+||||||.
T Consensus 73 h~~i--~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~ 149 (326)
T 1blx_A 73 HPNV--VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQ 149 (326)
T ss_dssp CTTB--CCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred CCCe--EeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHH
Confidence 5443 333332 457899999996 777764321 11 247889999999999999999999999
Q ss_pred cEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 231 NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
|||++.++.++|+|||.+........ .....+.....+|+.+....++.++||||||+++++++++...+
T Consensus 150 Nili~~~~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 219 (326)
T 1blx_A 150 NILVTSSGQIKLADFGLARIYSFQMA----------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219 (326)
T ss_dssp GEEECTTCCEEECSCCSCCCCCGGGG----------GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred HeEEcCCCCEEEecCcccccccCCCC----------ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999975432211 11122333344566556678999999999999999999875432
Q ss_pred ch---h----h---------------------------------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 311 LD---K----E---------------------------------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 311 l~---~----~---------------------------------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.. . . .....++..+.++|.+|+..+|++||++++....
T Consensus 220 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 220 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 10 0 0 0114578888999999999999999999887653
No 224
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.95 E-value=2.3e-28 Score=244.15 Aligned_cols=222 Identities=11% Similarity=0.024 Sum_probs=159.9
Q ss_pred eeecceecccCceeEEEEEe-CCCCEE--EEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hh
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVL--AMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-ED 168 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~V--AVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~ 168 (472)
|.+.+.||+|+||.||+|.+ .+|..+ |||.++...... ....+.+|+.+|.++ .|
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~~h 85 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---------------------DHRDFAGELEVLCKLGHH 85 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------------------------CHHHHHHHHHTTCCCC
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchH---------------------HHHHHHHHHHHHHhccCC
Confidence 56789999999999999998 456654 899876321100 011345799999999 66
Q ss_pred CCCCcceeeec----CCceeEEeecCCCChhhhhccCC------------------h----HHHHHHHHHHHHHHHHCCc
Q 012042 169 HGFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN------------------P----DSVFETIIGLVVRLAEHGL 222 (472)
Q Consensus 169 ~gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~------------------~----~~i~~qIl~aL~~LH~~GI 222 (472)
++ ++.+++. +..++||||++|++|.+++.... + ..++.+|+.+|.+||++||
T Consensus 86 p~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 163 (327)
T 1fvr_A 86 PN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 163 (327)
T ss_dssp TT--BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred Cc--hhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 54 3444442 66899999999999988764221 1 2478999999999999999
Q ss_pred eeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhh
Q 012042 223 IHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFA 302 (472)
Q Consensus 223 IHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~ 302 (472)
+||||||.|||++.++.++|+|||++........ .. .........+|+.+....++.++|+||||+++++
T Consensus 164 vH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~---------~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 233 (327)
T 1fvr_A 164 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK---------KT-MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233 (327)
T ss_dssp ECSCCSGGGEEECGGGCEEECCTTCEESSCEECC---------C-----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred cCCCCccceEEEcCCCeEEEcccCcCcccccccc---------cc-CCCCCccccChhhhccccCCchhcchHHHHHHHH
Confidence 9999999999999999999999999874321110 00 0011122335554456778999999999999999
Q ss_pred hhh-ccCCcch-------hh-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 303 SIS-KTAGFLD-------KE-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 303 ~~t-~~~~~l~-------~~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+++ +..+... .. .....++..+.++|.+|+..+|.+|||+++..+
T Consensus 234 llt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 234 IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp HHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 998 6533211 00 113467889999999999999999999987654
No 225
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.95 E-value=2.5e-28 Score=235.23 Aligned_cols=216 Identities=10% Similarity=0.038 Sum_probs=158.7
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+. |+.||||+++....+... ...+.+|+.+|.++.|+++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~h~~i- 69 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRK--------------------SRDFNEECPRLRIFSHPNV- 69 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHH--------------------HHHHHHHGGGGCCCSCTTE-
T ss_pred hHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHH--------------------HHHHHHHHHHHHhcCCCch-
Confidence 566799999999999999885 889999998754322111 1235679999999987653
Q ss_pred cceeeec------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEcC
Q 012042 173 VPNAVDC------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHG--LIHCDFNEFNIMIDD 236 (472)
Q Consensus 173 vP~~i~~------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~G--IIHrDLKP~NILl~~ 236 (472)
..+++. +..++||||++|++|.+++... .+ ..++.+|+.+|.|||++| |+||||||.|||++.
T Consensus 70 -v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~ 148 (271)
T 3kmu_A 70 -LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE 148 (271)
T ss_dssp -ECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT
T ss_pred -hheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC
Confidence 344432 4569999999999999886432 12 248899999999999999 999999999999999
Q ss_pred CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCC---CcchheeccCchhhhhhhccCCcchh
Q 012042 237 DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDD---GSDIDTDEGSRLSFASISKTAGFLDK 313 (472)
Q Consensus 237 ~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~---~~~sDiySlG~~~f~~~t~~~~~l~~ 313 (472)
++.++|+|||++.....+. ..++..+.+|+.+..... +.++||||||+++++++++..+....
T Consensus 149 ~~~~~l~~~~~~~~~~~~~--------------~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 214 (271)
T 3kmu_A 149 DMTARISMADVKFSFQSPG--------------RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214 (271)
T ss_dssp TSCEEEEGGGSCCTTSCTT--------------CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred CcceeEEeccceeeecccC--------------ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9999999988875432111 112223345554433333 34799999999999999976432110
Q ss_pred ---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 314 ---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 314 ---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
...+..++..+.++|.+|+..+|++|||+++-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (271)
T 3kmu_A 215 SNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMI 261 (271)
T ss_dssp CHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 01235688999999999999999999998754
No 226
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.95 E-value=9.5e-28 Score=245.84 Aligned_cols=181 Identities=15% Similarity=0.223 Sum_probs=134.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC-
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG- 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g- 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.... + ...+.+|+.++..+.++.
T Consensus 56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~----------------------~~~~~~e~~~l~~l~~~~~ 112 (382)
T 2vx3_A 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-F----------------------LNQAQIEVRLLELMNKHDT 112 (382)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHH-H----------------------HHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH-H----------------------HHHHHHHHHHHHHHHhccc
Confidence 78889999999999999998 4688999999863211 1 113457888998887543
Q ss_pred CC---cceeee----cCCceeEEeecCCCChhhhhccC----C----hHHHHHHHHHHHHHHH--HCCceeccCCCCcEE
Q 012042 171 FP---VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQ----N----PDSVFETIIGLVVRLA--EHGLIHCDFNEFNIM 233 (472)
Q Consensus 171 i~---vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~----~----~~~i~~qIl~aL~~LH--~~GIIHrDLKP~NIL 233 (472)
+. ++.++. .+..||||||++| +|.+++... . ...++.||+.+|.||| +.|||||||||.|||
T Consensus 113 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIl 191 (382)
T 2vx3_A 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENIL 191 (382)
T ss_dssp GGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEE
T ss_pred ccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEE
Confidence 21 222222 2668999999976 777765321 1 2358899999999999 579999999999999
Q ss_pred Ec--CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCC
Q 012042 234 ID--DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAG 309 (472)
Q Consensus 234 l~--~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~ 309 (472)
++ .++.++|+|||+|...... ...+.++..+.+|+.+.+..++.++||||||+++|+++++..+
T Consensus 192 l~~~~~~~~kL~DFG~a~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 257 (382)
T 2vx3_A 192 LCNPKRSAIKIVDFGSSCQLGQR------------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257 (382)
T ss_dssp ESSTTSCCEEECCCTTCEETTCC------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EecCCCCcEEEEeccCceecccc------------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 95 4678999999999865322 1122334445566666677899999999999999999997643
No 227
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.95 E-value=8.2e-28 Score=237.74 Aligned_cols=197 Identities=10% Similarity=0.021 Sum_probs=152.9
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +|+.||||+++.....-.. ....+.+|+.++.++.|+++
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~-------------------~~~~~~~e~~~l~~l~hp~i 93 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDD-------------------VLQETLSRTLRLSRIDKPGV 93 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHH-------------------HHHHHHHHHHHHHTCCCTTB
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHH-------------------HHHHHHHHHHHHhcCCCCCc
Confidence 778899999999999999994 6999999998744221100 01234579999999988753
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhccCC-h---HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-P---DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-~---~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
+.++++ +..|+||||++|++|.+++.... + ..++.||+.+|.|||++||+||||||.|||++.+|.++|+
T Consensus 94 --v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~ 171 (286)
T 3uqc_A 94 --ARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLA 171 (286)
T ss_dssp --CCEEEEEEETTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEEC
T ss_pred --ceeeEEEEECCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEE
Confidence 444443 56899999999999999875432 2 2488999999999999999999999999999999999987
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----------
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----------- 312 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----------- 312 (472)
+++.+ + .++.++||||||+++|+++++..++..
T Consensus 172 ~~~~~------------------------------~------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~ 215 (286)
T 3uqc_A 172 YPATM------------------------------P------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE 215 (286)
T ss_dssp SCCCC------------------------------T------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC
T ss_pred ecccc------------------------------C------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH
Confidence 54432 1 257899999999999999997532210
Q ss_pred h---------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 K---------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~---------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....+++.++..+|.+|++.+|++| |+++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 216 RDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp BCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 0 01235688999999999999999999 8877655
No 228
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.95 E-value=5.4e-28 Score=240.24 Aligned_cols=232 Identities=17% Similarity=0.134 Sum_probs=155.7
Q ss_pred ceeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-h
Q 012042 91 VFTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-D 168 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~ 168 (472)
.-|.+.+.||+|+||.||+|.+ .+|+.||||++....... ...+.+|+.+|.++. |
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~e~~~l~~l~~h 85 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEK----------------------NRAIIQEVCFMKKLSGH 85 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHH----------------------HHHHHHHHHHHHHHTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHH----------------------HHHHHHHHHHHHHhccC
Confidence 3578899999999999999998 579999999875332111 113457999999996 6
Q ss_pred CCCCcceeeec------------CCceeEEeecCCCChhhhhcc-----CC----hHHHHHHHHHHHHHHHHCC--ceec
Q 012042 169 HGFPVPNAVDC------------NRHCVIMSLVQGYPLVQVNQL-----QN----PDSVFETIIGLVVRLAEHG--LIHC 225 (472)
Q Consensus 169 ~gi~vP~~i~~------------~~~~LVMEyi~G~~L~~l~~~-----~~----~~~i~~qIl~aL~~LH~~G--IIHr 225 (472)
+++ +.+++. ...++||||++| +|.+++.. .. ...++.+|+.+|.|||+.| |+||
T Consensus 86 ~~i--v~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~ 162 (337)
T 3ll6_A 86 PNI--VQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHR 162 (337)
T ss_dssp TTB--CCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCC
T ss_pred CCh--hhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEc
Confidence 553 333321 236899999975 56554321 11 2348899999999999999 9999
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhc--cc-cchhhhhcccccccccccc---ccCCCCcchheeccCch
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFD--RD-VECIFKFFRKRFHLNFQET---TDGDDGSDIDTDEGSRL 299 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~--rD-~~~i~~~f~~~y~~~~~~~---~~~~~~~~sDiySlG~~ 299 (472)
||||.|||++.++.++|+|||++............. +. ........+...+.+|+.+ ....++.++||||||++
T Consensus 163 Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~i 242 (337)
T 3ll6_A 163 DLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242 (337)
T ss_dssp CCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHH
T ss_pred cCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHH
Confidence 999999999999999999999998665322111000 00 0001112233333455544 45678999999999999
Q ss_pred hhhhhhccCCcchh-----------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 300 SFASISKTAGFLDK-----------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 300 ~f~~~t~~~~~l~~-----------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+|+++++..+.... .......+..+..+|.+|++.+|++||++++..+
T Consensus 243 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 301 (337)
T 3ll6_A 243 LYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVH 301 (337)
T ss_dssp HHHHHHSSCCC------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCcchhHHHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999976432110 0112456678899999999999999999887765
No 229
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.95 E-value=4.6e-28 Score=243.18 Aligned_cols=237 Identities=12% Similarity=0.144 Sum_probs=164.6
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+ +|+.||||++........ ...................+.+|+.+|.+|.|+++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i- 105 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKK-----RDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC- 105 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSC-----EEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB-
T ss_pred eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccch-----hhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc-
Confidence 67789999999999999999 899999999863211000 00000000000000011346689999999987653
Q ss_pred cceeee----cCCceeEEeecCCCChhhh------hcc--C--Ch----HHHHHHHHHHHHHHHH-CCceeccCCCCcEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQV------NQL--Q--NP----DSVFETIIGLVVRLAE-HGLIHCDFNEFNIM 233 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l------~~~--~--~~----~~i~~qIl~aL~~LH~-~GIIHrDLKP~NIL 233 (472)
+.+++ .+..++||||++|++|.++ +.. . .+ ..++.+|+.+|.+||+ +||+||||||.|||
T Consensus 106 -~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 106 -LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp -CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred -ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 33333 2678999999999999887 432 1 11 2488999999999999 99999999999999
Q ss_pred EcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC-CCCc-chheeccCchhhhhhhccCCcc
Q 012042 234 IDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG-DDGS-DIDTDEGSRLSFASISKTAGFL 311 (472)
Q Consensus 234 l~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~-~~~~-~sDiySlG~~~f~~~t~~~~~l 311 (472)
++.++.++|+|||.+....... .....+.....+|+.+... .++. ++|+||||+++++++++..+..
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDKK-----------IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTTE-----------ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EcCCCcEEEecccccccccccc-----------ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999998653221 1111223333455554444 5656 9999999999999999754321
Q ss_pred h----h----hh------hc-------------------cCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 312 D----K----EL------AA-------------------SGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 312 ~----~----~~------~~-------------------~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
. . .+ .+ ..++..+.++|.+|+..+|.+|||+++....
T Consensus 254 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 254 LKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0 00 01 4578899999999999999999999877663
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.95 E-value=4.2e-28 Score=237.62 Aligned_cols=222 Identities=13% Similarity=0.199 Sum_probs=161.8
Q ss_pred eeecceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+. +++.||||++........ ....+.+|+.++.++.|+++
T Consensus 24 y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~~i 83 (287)
T 2wei_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--------------------DTSTILREVELLKKLDHPNI 83 (287)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSS--------------------CHHHHHHHHHHHHTCCCTTB
T ss_pred ceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchH--------------------HHHHHHHHHHHHHhccCCCc
Confidence 778899999999999999984 799999999863321110 01235579999999987653
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhcc--C-C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC---C
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQL--Q-N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD---E 238 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~--~-~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~---g 238 (472)
+.+++. +..++||||++|++|.+.+.. . . ...++.+|+.+|.+||++||+||||||.||+++.+ +
T Consensus 84 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~ 161 (287)
T 2wei_A 84 --MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC 161 (287)
T ss_dssp --CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred --cEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcc
Confidence 444442 567999999999999776421 1 1 23488999999999999999999999999999754 4
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch------
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD------ 312 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~------ 312 (472)
.++|+|||.+........ .....+.....+|+. ..+.++.++|+||||+++++++++..+...
T Consensus 162 ~~kL~Dfg~~~~~~~~~~----------~~~~~~~~~y~aPE~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 230 (287)
T 2wei_A 162 DIKIIDFGLSTCFQQNTK----------MKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230 (287)
T ss_dssp CEEECSTTGGGTBCCCSS----------CSCHHHHHTTCCHHH-HTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred cEEEeccCcceeecCCCc----------cccccCcccccChHH-hcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 699999999875432211 011122223334443 455689999999999999999997543211
Q ss_pred -hhh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 -KEL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 -~~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
..+ ....++.++.++|.+|+..+|++|||+++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 231 LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 000 11467889999999999999999999877543
No 231
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=5.3e-28 Score=240.99 Aligned_cols=221 Identities=9% Similarity=0.076 Sum_probs=149.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh--hhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL--EDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L--~~~g 170 (472)
|.+.+.||+|+||.||+|.+. |+.||||++..... ....+|..++..+ .|++
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-------------------------~~~~~e~~~~~~~~~~h~~ 92 (337)
T 3mdy_A 39 IQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE-------------------------ASWFRETEIYQTVLMRHEN 92 (337)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH-------------------------HHHHHHHHHHTSTTCCCTT
T ss_pred eEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc-------------------------chhhhHHHHHHHHhhcCCC
Confidence 677899999999999999875 88999999853210 0112344444443 5544
Q ss_pred CCcceeeec--------CCceeEEeecCCCChhhhhccCC-----hHHHHHHHHHHHHHHHHC--------CceeccCCC
Q 012042 171 FPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQN-----PDSVFETIIGLVVRLAEH--------GLIHCDFNE 229 (472)
Q Consensus 171 i~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~~-----~~~i~~qIl~aL~~LH~~--------GIIHrDLKP 229 (472)
+ ..+++. ...++||||++|++|.+++.... ...++.+++.+|.|||.. ||+||||||
T Consensus 93 i--~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp 170 (337)
T 3mdy_A 93 I--LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170 (337)
T ss_dssp B--CCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCG
T ss_pred e--eeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccch
Confidence 2 333332 45789999999999998864321 224889999999999998 999999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcc------hheeccCchhhhh
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSD------IDTDEGSRLSFAS 303 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~------sDiySlG~~~f~~ 303 (472)
.|||++.++.++|+|||++............. ...+.++..+++|+.+.....+.. +||||||+++|++
T Consensus 171 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el 245 (337)
T 3mdy_A 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIP-----PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245 (337)
T ss_dssp GGEEECTTSCEEECCCTTCEECC--------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHH
T ss_pred HHEEECCCCCEEEEeCCCceeeccccccccCC-----CCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHH
Confidence 99999999999999999997654322211100 011233333445555444444444 9999999999999
Q ss_pred hhcc----------CCcchh------------hh-------------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 304 ISKT----------AGFLDK------------EL-------------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 304 ~t~~----------~~~l~~------------~~-------------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+++. .+.... .+ ....++.++.++|.+|+..+|.+|||+.+-.
T Consensus 246 ~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 323 (337)
T 3mdy_A 246 ARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVK 323 (337)
T ss_dssp HTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHH
Confidence 9872 111000 00 0112345578999999999999999987654
No 232
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.95 E-value=6.1e-28 Score=243.34 Aligned_cols=215 Identities=14% Similarity=0.130 Sum_probs=146.2
Q ss_pred eee-cceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHH-HHHhhhC
Q 012042 93 TAV-GRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAF-MKALEDH 169 (472)
Q Consensus 93 ~~i-~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~-L~~L~~~ 169 (472)
|.+ .+.||+|+||.||+|.+. +|+.||||++..... ..+|+.. +..+.|+
T Consensus 30 y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------~~~e~~~~~~~~~h~ 82 (336)
T 3fhr_A 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK---------------------------ARQEVDHHWQASGGP 82 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH---------------------------HHHHHHHHHHHTTST
T ss_pred eEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH---------------------------HHHHHHHHHHhcCCC
Confidence 455 457999999999999994 799999999863210 1123333 3445554
Q ss_pred CCCcceeeec--------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 170 GFPVPNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 170 gi~vP~~i~~--------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
+ ++.+++. ...+|||||++|++|.+++... .+ ..++.+|+.+|.|||++||+||||||.|||
T Consensus 83 ~--i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIl 160 (336)
T 3fhr_A 83 H--IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160 (336)
T ss_dssp T--BCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred C--hHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 3 3444442 2268999999999998876432 12 248899999999999999999999999999
Q ss_pred EcC---CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCc
Q 012042 234 IDD---DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 234 l~~---~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
++. ++.++|+|||++........ ....+...+++|+.+....++.++||||||+++|+++++..+.
T Consensus 161 l~~~~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (336)
T 3fhr_A 161 YTSKEKDAVLKLTDFGFAKETTQNAL-----------QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229 (336)
T ss_dssp ESCSSTTCCEEECCCTTCEEC---------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred EEecCCCceEEEeccccceecccccc-----------ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 975 34599999999975532211 1112233344566555677899999999999999999975432
Q ss_pred chh-----------hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 LDK-----------EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 l~~-----------~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
... .+ ....++.++.++|.+|+..+|.+|||+++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 230 YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 110 00 01467889999999999999999999887654
No 233
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.95 E-value=4.3e-28 Score=236.72 Aligned_cols=227 Identities=11% Similarity=0.042 Sum_probs=155.7
Q ss_pred eeeecceecccCceeEEEEEe--CCCC--EEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVAR--EDGT--VLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~--~~g~--~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+.+.||+|+||.||+|.+ .+++ .||||+++.....-. .....+.+|+.++.++.
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~ 79 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP-------------------EAMDDFIREVNAMHSLD 79 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------C-------------------HHHHHHHHHHHHHHHCC
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCH-------------------HHHHHHHHHHHHHHhCC
Confidence 367889999999999999986 2344 689998763311000 01124568999999998
Q ss_pred hCCCCcceeeec---CCceeEEeecCCCChhhhhccC----C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ----N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~----~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.++++ ...++||||++|++|.+.+... . ...++.+|+.+|.+||++||+||||||.|||++.+
T Consensus 80 h~~i--~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~ 157 (291)
T 1u46_A 80 HRNL--IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR 157 (291)
T ss_dssp CTTB--CCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET
T ss_pred CCCc--ccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCC
Confidence 7653 444442 5689999999999998865321 1 12478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccc-cccccccCCCCcchheeccCchhhhhhh-ccCCcch---
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHL-NFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD--- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~-~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~--- 312 (472)
+.++|+|||++........... ..........| +|+.+....++.++|+||||++++++++ +..+...
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 230 (291)
T 1u46_A 158 DLVKIGDFGLMRALPQNDDHYV-------MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230 (291)
T ss_dssp TEEEECCCTTCEECCC-CCEEE-------C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred CCEEEccccccccccccccchh-------hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH
Confidence 9999999999986643221110 01111122233 4554456678999999999999999998 6533211
Q ss_pred h----hh--------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 K----EL--------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 ~----~~--------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. .+ ....++..+.++|.+|+..+|++|||..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 276 (291)
T 1u46_A 231 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 276 (291)
T ss_dssp HHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 0 01 1246788999999999999999999987654
No 234
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.95 E-value=4.2e-28 Score=242.41 Aligned_cols=230 Identities=17% Similarity=0.141 Sum_probs=164.5
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++........ .+... ..+.+|+.+|.++.+..
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~----------~~~~~E~~~l~~l~~~~ 107 (320)
T 3a99_A 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG------ELPNG----------TRVPMEVVLLKKVSSGF 107 (320)
T ss_dssp TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEE------ECTTC----------CEEEHHHHHHHHHCSSS
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhh------hhhhh----------hHHHHHHHHHHhhccCC
Confidence 378899999999999999998 57899999998643211000 00000 01236899999997522
Q ss_pred CCcceeeec----CCceeEEeecCC-CChhhhhccC---C---hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-CCC
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQG-YPLVQVNQLQ---N---PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDE 238 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G-~~L~~l~~~~---~---~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~-~~g 238 (472)
-.++.++++ +..++||||+.+ ++|.+++... . ...++.||+.+|.|||+.||+||||||.|||++ .++
T Consensus 108 ~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~ 187 (320)
T 3a99_A 108 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG 187 (320)
T ss_dssp CSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred CCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCC
Confidence 234555443 568999999986 7888765321 1 224788999999999999999999999999999 778
Q ss_pred cEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCC-CCcchheeccCchhhhhhhccCCcchh----
Q 012042 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGD-DGSDIDTDEGSRLSFASISKTAGFLDK---- 313 (472)
Q Consensus 239 ~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~-~~~~sDiySlG~~~f~~~t~~~~~l~~---- 313 (472)
.++|+|||++........ ..+.+...+.+|+.+.... .+.++|+||||+++++++++..+....
T Consensus 188 ~~kL~Dfg~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 256 (320)
T 3a99_A 188 ELKLIDFGSGALLKDTVY-----------TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 256 (320)
T ss_dssp EEEECCCTTCEECCSSCB-----------CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH
T ss_pred CEEEeeCccccccccccc-----------cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh
Confidence 999999999986543211 1112233334454443334 478899999999999999986543211
Q ss_pred ---hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 314 ---ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 314 ---~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
......++.++.++|.+|+..+|++|||+++..+.
T Consensus 257 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 257 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp HCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11246789999999999999999999999877653
No 235
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.95 E-value=7e-28 Score=237.17 Aligned_cols=227 Identities=13% Similarity=0.090 Sum_probs=160.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+++.||||+++... .... ......+.+|+.+|.++.|+++
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~----------------~~~~~~~~~E~~~l~~l~h~~i 68 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKK--LRRI----------------PNGEANVKKEIQLLRRLRHKNV 68 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHH--HHHS----------------TTHHHHHHHHHHHHTTCCCTTB
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccc--cccc----------------chhHHHHHHHHHHHHhcCCCCe
Confidence 67789999999999999998 578999999986321 1000 0012346689999999988763
Q ss_pred Ccceeeec------CCceeEEeecCCCChhhhhcc----CC----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 172 PVPNAVDC------NRHCVIMSLVQGYPLVQVNQL----QN----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 172 ~vP~~i~~------~~~~LVMEyi~G~~L~~l~~~----~~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
+.+++. ...++||||++|+ |..++.. .. ...++.+|+.+|.+||++||+||||||.|||++.+
T Consensus 69 --~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~ 145 (305)
T 2wtk_C 69 --IQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG 145 (305)
T ss_dssp --CCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred --eEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCC
Confidence 343332 4679999999987 4443321 11 12478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc--CCCCcchheeccCchhhhhhhccCCcchh--
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASISKTAGFLDK-- 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t~~~~~l~~-- 313 (472)
+.++|+|||.+.......... ......+.....+|+.+.. ...+.++|+||||+++++++++..+....
T Consensus 146 ~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 218 (305)
T 2wtk_C 146 GTLKISALGVAEALHPFAADD-------TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI 218 (305)
T ss_dssp CCEEECCCTTCEECCTTCSSC-------EECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CcEEeeccccccccCcccccc-------ccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH
Confidence 999999999998653211110 0011122222334444332 23478999999999999999976432110
Q ss_pred -----h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 -----E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 -----~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....++..+.++|.+|+..+|.+|||+++...
T Consensus 219 ~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 219 YKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 113467888999999999999999999987765
No 236
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.95 E-value=2.6e-27 Score=233.89 Aligned_cols=192 Identities=13% Similarity=0.141 Sum_probs=147.4
Q ss_pred cceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCCCCc
Q 012042 96 GRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHGFPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~gi~v 173 (472)
.+.||+|+||.||+|.+ .+|+.||||+++... .+.+|+.++.++ .|++ +
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------------------~~~~e~~~~~~~~~h~~--i 73 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP---------------------------KARREVELHWRASQCPH--I 73 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECSH---------------------------HHHHHHHHHHHHTTSTT--B
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecccH---------------------------HHHHHHHHHHHhccCCC--c
Confidence 47899999999999998 579999999985321 134688887554 5544 2
Q ss_pred ceeeec--------CCceeEEeecCCCChhhhhccC----Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC-
Q 012042 174 PNAVDC--------NRHCVIMSLVQGYPLVQVNQLQ----NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD- 236 (472)
Q Consensus 174 P~~i~~--------~~~~LVMEyi~G~~L~~l~~~~----~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~- 236 (472)
+.+++. ...+|||||++|++|.+++... .+ ..++.+|+.+|.|||++||+||||||.|||++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~ 153 (299)
T 3m2w_A 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 153 (299)
T ss_dssp CCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS
T ss_pred hhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC
Confidence 333332 3468999999999998876432 22 248899999999999999999999999999997
Q ss_pred --CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcchh-
Q 012042 237 --DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLDK- 313 (472)
Q Consensus 237 --~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~- 313 (472)
++.++|+|||++.... ...++.++|+||||+++++++++..+....
T Consensus 154 ~~~~~~kl~Dfg~a~~~~-------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 202 (299)
T 3m2w_A 154 RPNAILKLTDFGFAKETT-------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 202 (299)
T ss_dssp STTCCEEECCCTTCEECT-------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--
T ss_pred CCCCcEEEeccccccccc-------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence 7889999999986432 122567899999999999999975432110
Q ss_pred ----------hh----------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 314 ----------EL----------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 314 ----------~~----------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.+ ....++.++.++|.+|+..+|.+|||+++...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 203 GLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -----CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 01467899999999999999999999887665
No 237
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.95 E-value=7.9e-28 Score=242.56 Aligned_cols=222 Identities=13% Similarity=0.073 Sum_probs=146.8
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++........ ...+|+..+..+.|+++
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------~~~~~~~~l~~l~h~ni 81 (360)
T 3e3p_A 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN-----------------------RELQIMQDLAVLHHPNI 81 (360)
T ss_dssp EEEC----------CEEEEETTTCCEEEEEEEECCTTCCC-----------------------HHHHHHHHHHHHCCTTB
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccH-----------------------HHHHHHHHHHhcCCCCc
Confidence 67789999999999999998 5799999998754321110 12356777888887653
Q ss_pred Ccceeeec----CC-------ceeEEeecCCCChhhhh---cc--CC----hHHHHHHHHHHHHHHH--HCCceeccCCC
Q 012042 172 PVPNAVDC----NR-------HCVIMSLVQGYPLVQVN---QL--QN----PDSVFETIIGLVVRLA--EHGLIHCDFNE 229 (472)
Q Consensus 172 ~vP~~i~~----~~-------~~LVMEyi~G~~L~~l~---~~--~~----~~~i~~qIl~aL~~LH--~~GIIHrDLKP 229 (472)
+.++++ +. .++||||++|..+..+. .. .. ...++.+++.+|.+|| ++||+||||||
T Consensus 82 --v~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp 159 (360)
T 3e3p_A 82 --VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKP 159 (360)
T ss_dssp --CCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCG
T ss_pred --ccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCH
Confidence 333332 11 68999999986433322 11 11 1247889999999999 99999999999
Q ss_pred CcEEEcC-CCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-CCCCcchheeccCchhhhhhhcc
Q 012042 230 FNIMIDD-DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-GDDGSDIDTDEGSRLSFASISKT 307 (472)
Q Consensus 230 ~NILl~~-~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-~~~~~~sDiySlG~~~f~~~t~~ 307 (472)
.|||++. ++.++|+|||++........ ...+.++..+.+|+.+.+ ..++.++||||||+++|+++++.
T Consensus 160 ~NIll~~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~ 229 (360)
T 3e3p_A 160 HNVLVNEADGTLKLCDFGSAKKLSPSEP----------NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229 (360)
T ss_dssp GGEEEETTTTEEEECCCTTCBCCCTTSC----------CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred HHEEEeCCCCcEEEeeCCCceecCCCCC----------cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999996 88999999999976542211 111233333445554433 45899999999999999999976
Q ss_pred CCcchh-------hhh--------------------------------------ccCCCHHHHHHHHHHHhcCcccCCCC
Q 012042 308 AGFLDK-------ELA--------------------------------------ASGFTRKDQDVIQKFIGGSIEESGSD 342 (472)
Q Consensus 308 ~~~l~~-------~~~--------------------------------------~~~~s~~~~~~l~k~l~~~p~~R~s~ 342 (472)
.++... .+. ....+.++.++|.+||..+|.+|||+
T Consensus 230 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 309 (360)
T 3e3p_A 230 PIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309 (360)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCH
Confidence 432110 000 01145678899999999999999999
Q ss_pred CCCCCCC
Q 012042 343 DEGSDDG 349 (472)
Q Consensus 343 ~e~~~~~ 349 (472)
++..+.-
T Consensus 310 ~e~l~hp 316 (360)
T 3e3p_A 310 YEALCHP 316 (360)
T ss_dssp HHHTTSG
T ss_pred HHHhcCc
Confidence 8887643
No 238
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=6.1e-29 Score=243.79 Aligned_cols=222 Identities=9% Similarity=0.074 Sum_probs=142.2
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH--hhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA--LEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~--L~~~g 170 (472)
|.+.+.||+|+||.||+|.+. |+.||||++.... . ....+|..++.. +.|++
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~-----------------------~~~~~e~~~~~~~~~~h~~ 58 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--E-----------------------RSWFREAEIYQTVMLRHEN 58 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT--H-----------------------HHHHHHHHHHTSTTCCC-C
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEecccc--h-----------------------hhHHHHHHHHHHHhccCcc
Confidence 567899999999999999764 8899999975321 0 012356666666 55544
Q ss_pred CCcceeeec----C----CceeEEeecCCCChhhhhccC-----ChHHHHHHHHHHHHHHH--------HCCceeccCCC
Q 012042 171 FPVPNAVDC----N----RHCVIMSLVQGYPLVQVNQLQ-----NPDSVFETIIGLVVRLA--------EHGLIHCDFNE 229 (472)
Q Consensus 171 i~vP~~i~~----~----~~~LVMEyi~G~~L~~l~~~~-----~~~~i~~qIl~aL~~LH--------~~GIIHrDLKP 229 (472)
+ ..+++. . ..++||||++|++|.+++... ....++.+++.+|.||| +.||+||||||
T Consensus 59 i--~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp 136 (303)
T 3gxj_A 59 I--LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136 (303)
T ss_dssp B--CCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCG
T ss_pred e--eeeeeecccCCCccceeEEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCH
Confidence 2 333332 2 578999999999999876422 33468889999999999 99999999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC------CCCcchheeccCchhhhh
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG------DDGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~------~~~~~sDiySlG~~~f~~ 303 (472)
.|||++.++.++|+|||++.....+...... ......++..+.+|+.+... .++.++||||||++++++
T Consensus 137 ~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el 211 (303)
T 3gxj_A 137 KNILVKKNGTCCIADLGLAVRHDSATDTIDI-----APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211 (303)
T ss_dssp GGC-CCTTCCC-BCCCCC-CCEETTTTEESC-----C-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CT
T ss_pred HHeEECCCCCEEEeecCcceeccCCCccccc-----ccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHH
Confidence 9999999999999999999755432211000 01112333333455544333 344689999999999999
Q ss_pred hhcc----------CCcch------------hhh----hccCCC---------HHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 304 ISKT----------AGFLD------------KEL----AASGFT---------RKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 304 ~t~~----------~~~l~------------~~~----~~~~~s---------~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
+++. .+... ..+ ....+. ..+.++|.+|+..+|.+|||+++-.+
T Consensus 212 ~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 290 (303)
T 3gxj_A 212 ARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp GGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred HhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 9872 11100 000 011222 25788999999999999999887543
No 239
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.94 E-value=9.1e-28 Score=264.73 Aligned_cols=216 Identities=13% Similarity=0.096 Sum_probs=156.2
Q ss_pred eeecceecccCceeEEEEEeC--CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVARE--DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~--~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+. +|+.||||++......- ....+.+|+.+|.++.|++
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~hp~ 140 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAE---------------------AQAMAMAERQFLAEVVHPS 140 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHH---------------------HHHHHHHHHGGGGGCCCTT
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHH---------------------HHHHHHHHHHHHHhcCCCC
Confidence 788899999999999999984 68999999875332110 0123557999999998876
Q ss_pred CCcceeeec----CC-----ceeEEeecCCCChhhhhccCCh----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 171 FPVPNAVDC----NR-----HCVIMSLVQGYPLVQVNQLQNP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 171 i~vP~~i~~----~~-----~~LVMEyi~G~~L~~l~~~~~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
| +.++++ +. .||||||++|++|.+.+....+ ..++.+|+.+|.|||++|||||||||.|||++.+
T Consensus 141 i--v~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~ 218 (681)
T 2pzi_A 141 I--VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218 (681)
T ss_dssp B--CCEEEEEEEECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS
T ss_pred c--CeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC
Confidence 3 555543 22 5999999999999887543322 2488999999999999999999999999999874
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCCcch-----
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAGFLD----- 312 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~~l~----- 312 (472)
.++|+|||++...... ....++..+++|+.+ .+..+.++||||||+++++++++......
T Consensus 219 -~~kl~DFG~a~~~~~~-------------~~~~gt~~y~aPE~~-~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~ 283 (681)
T 2pzi_A 219 -QLKLIDLGAVSRINSF-------------GYLYGTPGFQAPEIV-RTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG 283 (681)
T ss_dssp -CEEECCCTTCEETTCC-------------SCCCCCTTTSCTTHH-HHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS
T ss_pred -cEEEEecccchhcccC-------------CccCCCccccCHHHH-cCCCCCceehhhhHHHHHHHHhCCCCCccccccc
Confidence 8999999999865322 112233333445543 33458999999999999999986432111
Q ss_pred --hhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 313 --KELAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 313 --~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
........+..+..+|.+|+..+|++||++.+..
T Consensus 284 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l 319 (681)
T 2pzi_A 284 LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEM 319 (681)
T ss_dssp CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred ccccccccccCHHHHHHHhhhccCChhhCCCHHHHH
Confidence 0011122456788999999999999999876554
No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.94 E-value=7.7e-28 Score=243.46 Aligned_cols=222 Identities=15% Similarity=0.151 Sum_probs=158.6
Q ss_pred eeeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~g 170 (472)
-|.+.+.||+|+||.||+|.+ .+|+.||||+++.... ....+.+|+.+|.++.+..
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------~~~~~~~e~~~l~~l~~~~ 76 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-----------------------YTEAAEDEIKLLQRVNDAD 76 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-----------------------HHHHHHHHHHHHHHHHHTC
T ss_pred eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc-----------------------chhhhhHHHHHHHHhhccc
Confidence 377889999999999999998 5799999999863211 0123457899999887432
Q ss_pred ---------CCcceeeec----C----CceeEEeecCCCChhhhhcc----CCh----HHHHHHHHHHHHHHHHC-Ccee
Q 012042 171 ---------FPVPNAVDC----N----RHCVIMSLVQGYPLVQVNQL----QNP----DSVFETIIGLVVRLAEH-GLIH 224 (472)
Q Consensus 171 ---------i~vP~~i~~----~----~~~LVMEyi~G~~L~~l~~~----~~~----~~i~~qIl~aL~~LH~~-GIIH 224 (472)
-.++.+++. + ..++||||+ |++|.+++.. ..+ ..++.||+.+|.|||++ ||+|
T Consensus 77 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH 155 (373)
T 1q8y_A 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIH 155 (373)
T ss_dssp CSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred ccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEe
Confidence 113333332 1 578999999 8888776532 112 34889999999999998 9999
Q ss_pred ccCCCCcEEEcC------CCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCc
Q 012042 225 CDFNEFNIMIDD------DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSR 298 (472)
Q Consensus 225 rDLKP~NILl~~------~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~ 298 (472)
|||||.|||++. .+.++|+|||++....... ....++..+++|+.+.+..++.++||||||+
T Consensus 156 ~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~ 223 (373)
T 1q8y_A 156 TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY------------TNSIQTREYRSPEVLLGAPWGCGADIWSTAC 223 (373)
T ss_dssp SCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC------------CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHH
T ss_pred cCCChHHeEEeccCCCcCcceEEEcccccccccCCCC------------CCCCCCccccCcHHHhCCCCCchHhHHHHHH
Confidence 999999999953 3479999999998654221 1112333344566556677899999999999
Q ss_pred hhhhhhhccCCcchhh-------------h------------------------------------------------hc
Q 012042 299 LSFASISKTAGFLDKE-------------L------------------------------------------------AA 317 (472)
Q Consensus 299 ~~f~~~t~~~~~l~~~-------------~------------------------------------------------~~ 317 (472)
++|+++++..++.... + ..
T Consensus 224 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
T 1q8y_A 224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS 303 (373)
T ss_dssp HHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC
T ss_pred HHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCC
Confidence 9999999754321000 0 00
Q ss_pred cCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 318 SGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 318 ~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
..++.++.++|.+||..+|++|||+++..+..
T Consensus 304 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 335 (373)
T 1q8y_A 304 KDEAKEISDFLSPMLQLDPRKRADAGGLVNHP 335 (373)
T ss_dssp HHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred cchHHHHHHHHHHHhccCccccCCHHHHhhCh
Confidence 12245677899999999999999998887643
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.94 E-value=1.7e-27 Score=248.90 Aligned_cols=223 Identities=15% Similarity=0.115 Sum_probs=154.8
Q ss_pred eeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhCC
Q 012042 92 FTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDHG 170 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~g 170 (472)
.|.+.+.||+|+||.||.+...+|+.||||++.... . ..+.+|+.+|.++ .|++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~----------------------~~~~~E~~~l~~l~~Hpn 70 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---C----------------------DIALMEIKLLTESDDHPN 70 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---H----------------------HHHHHHHHHHHHHTTSTT
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---H----------------------HHHHHHHHHHHhccCCCC
Confidence 355678999999999988766789999999875321 0 1245799999887 5654
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhccCC-------------hHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQN-------------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIM 233 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~~-------------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NIL 233 (472)
+ ++.++. +..|||||||+| +|.+++.... ...++.||+.+|.|||++||+||||||.|||
T Consensus 71 I--v~~~~~~~~~~~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NIL 147 (434)
T 2rio_A 71 V--IRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNIL 147 (434)
T ss_dssp B--CCEEEEEECSSEEEEEECCCSE-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred c--CeEEEEEecCCeEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEE
Confidence 3 344432 557999999975 8888764221 1248999999999999999999999999999
Q ss_pred EcCC-------------CcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc-------CCCCcchhe
Q 012042 234 IDDD-------------EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD-------GDDGSDIDT 293 (472)
Q Consensus 234 l~~~-------------g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~-------~~~~~~sDi 293 (472)
++.+ +.++|+|||+|.......... . .......++...++|+.+.. ..++.++||
T Consensus 148 l~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~--~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Di 222 (434)
T 2rio_A 148 VSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF--R---TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222 (434)
T ss_dssp EECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHH
T ss_pred EecCcccccccccCCCceEEEEcccccceecCCCCccc--e---eeecCCCCCCCccCHHHhccccccccccCcchhhhh
Confidence 9754 379999999998765332110 0 01112233333445554432 678999999
Q ss_pred eccCchhhhhhh-ccCCcchh-----hhh-------------ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 294 DEGSRLSFASIS-KTAGFLDK-----ELA-------------ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 294 ySlG~~~f~~~t-~~~~~l~~-----~~~-------------~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
||||++++++++ +..+..+. .+. ...++.++.++|.+|+..+|.+|||+.+-..
T Consensus 223 wSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 223 FSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 999999999998 54332110 010 0123467889999999999999999987665
No 242
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94 E-value=1.3e-27 Score=261.97 Aligned_cols=222 Identities=13% Similarity=0.047 Sum_probs=159.7
Q ss_pred cceecccCceeEEEEEe---CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 96 GRQLGVGKESDIFEVAR---EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~---~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
.+.||+|+||.||+|.+ .+++.||||+++.....-. ....+.+|+.+|.+|.|+++
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~--------------------~~~~~~~E~~il~~l~hpnI- 432 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA--------------------LKDELLAEANVMQQLDNPYI- 432 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG--------------------GHHHHHHHHHHHHHCCCTTB-
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH--------------------HHHHHHHHHHHHHhCCCCCE-
Confidence 35899999999999965 2467899999864321110 11245689999999988653
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMI 243 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkII 243 (472)
..+++ ....+|||||++|++|.+++... . ...++.+|+.+|.|||++|||||||||.||||+.++.+||+
T Consensus 433 -v~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~ 511 (635)
T 4fl3_A 433 -VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS 511 (635)
T ss_dssp -CCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred -eeEEEEEecCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEE
Confidence 34443 36688999999999998876432 1 13588999999999999999999999999999999999999
Q ss_pred eCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h----h-
Q 012042 244 DFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K----E- 314 (472)
Q Consensus 244 DFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~----~- 314 (472)
|||+|+......... ........+..+++|+.+....++.++||||||++++++++ +..+... . .
T Consensus 512 DFGla~~~~~~~~~~------~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i 585 (635)
T 4fl3_A 512 DFGLSKALRADENYY------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 585 (635)
T ss_dssp CTTHHHHTTC-------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred EcCCccccccCcccc------ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999997553221100 00000011112345555566789999999999999999998 6543211 0 0
Q ss_pred ------hhccCCCHHHHHHHHHHHhcCcccCCCCCCC
Q 012042 315 ------LAASGFTRKDQDVIQKFIGGSIEESGSDDEG 345 (472)
Q Consensus 315 ------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~ 345 (472)
....+++.++.++|.+|+..+|++||+.++.
T Consensus 586 ~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l 622 (635)
T 4fl3_A 586 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 622 (635)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 1135688899999999999999999998764
No 243
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.8e-27 Score=259.90 Aligned_cols=222 Identities=10% Similarity=0.041 Sum_probs=159.4
Q ss_pred cceecccCceeEEEEEeC---CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 96 GRQLGVGKESDIFEVARE---DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~---~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
...||+|+||.||+|.+. ++..||||+++...... ....+.+|+.+|.+|.|+++
T Consensus 341 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~---------------------~~~~~~~E~~il~~l~hpni- 398 (613)
T 2ozo_A 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---------------------DTEEMMREAQIMHQLDNPYI- 398 (613)
T ss_dssp EEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSST---------------------THHHHHHHHHHHTTCCCTTB-
T ss_pred CcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChH---------------------HHHHHHHHHHHHHhCCCCCE-
Confidence 348999999999999873 46679999987432110 01235689999999988653
Q ss_pred cceeee---cCCceeEEeecCCCChhhhhccC---C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEE
Q 012042 173 VPNAVD---CNRHCVIMSLVQGYPLVQVNQLQ---N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTM 242 (472)
Q Consensus 173 vP~~i~---~~~~~LVMEyi~G~~L~~l~~~~---~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkI 242 (472)
.++++ ....+|||||++|++|.+++... . ...++.+|+.+|.|||++|||||||||.||||+.++.+||
T Consensus 399 -v~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL 477 (613)
T 2ozo_A 399 -VRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKI 477 (613)
T ss_dssp -CCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred -eeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEE
Confidence 44443 26689999999999999876322 1 1248899999999999999999999999999999999999
Q ss_pred EeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch-------hh
Q 012042 243 IDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD-------KE 314 (472)
Q Consensus 243 IDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~-------~~ 314 (472)
+|||+++......... .. .... ..+...++|+.+....++.++||||||++++++++ +..+... ..
T Consensus 478 ~DFGla~~~~~~~~~~-~~----~~~~-~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~ 551 (613)
T 2ozo_A 478 SDFGLSKALGADDSYY-TA----RSAG-KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 551 (613)
T ss_dssp CCCSTTTTCC--------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH
T ss_pred eeccCcccccCCCcee-ee----ccCC-CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence 9999997543221100 00 0000 01112345555556889999999999999999998 5433211 00
Q ss_pred h-------hccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 315 L-------AASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 315 ~-------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+ .+..++.++.++|.+|+..+|++||+.++..
T Consensus 552 i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~ 590 (613)
T 2ozo_A 552 IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVE 590 (613)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 1 1356889999999999999999999987754
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.94 E-value=1.7e-27 Score=235.77 Aligned_cols=228 Identities=16% Similarity=0.141 Sum_probs=162.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh----h
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL----E 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L----~ 167 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||++......-.. ... ....+.+|+.++.++ .
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~------~~~----------~~~~~~~e~~~l~~l~~~~~ 96 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWS------PLS----------DSVTCPLEVALLWKVGAGGG 96 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC------------------------CCCCHHHHHHHHHHSSCC
T ss_pred eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccc------cch----------hhHHHHHHHHHHHhhcccCC
Confidence 67789999999999999988 57999999998643211000 000 001234689999999 4
Q ss_pred hCCCCcceeeec----CCceeEEee-cCCCChhhhhccC--C----hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-
Q 012042 168 DHGFPVPNAVDC----NRHCVIMSL-VQGYPLVQVNQLQ--N----PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID- 235 (472)
Q Consensus 168 ~~gi~vP~~i~~----~~~~LVMEy-i~G~~L~~l~~~~--~----~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~- 235 (472)
|++ ++.++++ +..++|||| +.|++|.+++... . ...++.+|+.+|.+||++||+||||||.|||++
T Consensus 97 h~~--i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 174 (312)
T 2iwi_A 97 HPG--VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL 174 (312)
T ss_dssp CSS--BCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET
T ss_pred CCC--eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC
Confidence 543 3444442 567999999 7899998875421 1 234889999999999999999999999999999
Q ss_pred CCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCC-CcchheeccCchhhhhhhccCCcch-h
Q 012042 236 DDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDD-GSDIDTDEGSRLSFASISKTAGFLD-K 313 (472)
Q Consensus 236 ~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~-~~~sDiySlG~~~f~~~t~~~~~l~-~ 313 (472)
.++.++|+|||.+........ ..+.+...+.+|+.+....+ +.++|+||||+++|+++++...... .
T Consensus 175 ~~~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 243 (312)
T 2iwi_A 175 RRGCAKLIDFGSGALLHDEPY-----------TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ 243 (312)
T ss_dssp TTTEEEECCCSSCEECCSSCB-----------CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred CCCeEEEEEcchhhhcccCcc-----------cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH
Confidence 788999999999986543211 11223333345554433444 5589999999999999998644321 1
Q ss_pred h------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 314 E------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 314 ~------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
. .....++..+.++|.+|+..+|++|||+++.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 244 EILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp HHHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred HHhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 1 11356889999999999999999999999887644
No 245
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.94 E-value=5.9e-27 Score=233.68 Aligned_cols=221 Identities=12% Similarity=0.090 Sum_probs=146.4
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHH-HHHHhhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFA-FMKALEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~-~L~~L~~~g 170 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++....... ...+.+|.. ++..+.|++
T Consensus 24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---------------------~~~~~~e~~~~~~~~~h~n 82 (327)
T 3aln_A 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE---------------------QKQLLMDLDVVMRSSDCPY 82 (327)
T ss_dssp EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHH---------------------HHHHHHHHHHHHSSCCCTT
T ss_pred hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchH---------------------HHHHHHHHHHHHHcCCCCc
Confidence 56678999999999999998 5799999999874321110 012234555 455566554
Q ss_pred CCcceeeec----CCceeEEeecCCCChhhhhc-------cCCh----HHHHHHHHHHHHHHHHC-CceeccCCCCcEEE
Q 012042 171 FPVPNAVDC----NRHCVIMSLVQGYPLVQVNQ-------LQNP----DSVFETIIGLVVRLAEH-GLIHCDFNEFNIMI 234 (472)
Q Consensus 171 i~vP~~i~~----~~~~LVMEyi~G~~L~~l~~-------~~~~----~~i~~qIl~aL~~LH~~-GIIHrDLKP~NILl 234 (472)
++.+++. +..++||||++| +|..++. ...+ ..++.+++.+|.+||+. ||+||||||.|||+
T Consensus 83 --iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll 159 (327)
T 3aln_A 83 --IVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL 159 (327)
T ss_dssp --BCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE
T ss_pred --EeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE
Confidence 3444432 567899999997 5554432 1111 24788999999999998 99999999999999
Q ss_pred cCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc----ccCCCCcchheeccCchhhhhhhccCCc
Q 012042 235 DDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET----TDGDDGSDIDTDEGSRLSFASISKTAGF 310 (472)
Q Consensus 235 ~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~----~~~~~~~~sDiySlG~~~f~~~t~~~~~ 310 (472)
+.++.++|+|||++......... ....+.....+|+.+ ....++.++|+||||+++++++++..+.
T Consensus 160 ~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (327)
T 3aln_A 160 DRSGNIKLCDFGISGQLVDSIAK----------TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229 (327)
T ss_dssp ETTTEEEECCCSSSCC----------------------------------------CCSHHHHHHHHHHHHHHHHSCCCS
T ss_pred cCCCCEEEccCCCceeccccccc----------ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999999999755322110 011222223345443 3466899999999999999999975432
Q ss_pred chh----------------hhh---ccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 311 LDK----------------ELA---ASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 311 l~~----------------~~~---~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
... .+. ...++..+..+|.+|+..+|++|||+++-..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 230 PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 110 000 1357889999999999999999999988765
No 246
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.94 E-value=4.4e-27 Score=235.12 Aligned_cols=221 Identities=10% Similarity=0.075 Sum_probs=152.9
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHH--hhhCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKA--LEDHG 170 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~--L~~~g 170 (472)
|.+.+.||+|+||.||+|.+ +|+.||||++.... . ....+|..++.. +.|++
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~-----------------------~~~~~e~~~~~~~~l~h~n 97 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--E-----------------------RSWFREAEIYQTVMLRHEN 97 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG--H-----------------------HHHHHHHHHHHHSCCCCTT
T ss_pred EEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh--H-----------------------HHHHHHHHHHHHhhcCCCc
Confidence 67789999999999999987 58999999985221 0 123467888877 56654
Q ss_pred CCcceeeec----C----CceeEEeecCCCChhhhhccC--C---hHHHHHHHHHHHHHHH--------HCCceeccCCC
Q 012042 171 FPVPNAVDC----N----RHCVIMSLVQGYPLVQVNQLQ--N---PDSVFETIIGLVVRLA--------EHGLIHCDFNE 229 (472)
Q Consensus 171 i~vP~~i~~----~----~~~LVMEyi~G~~L~~l~~~~--~---~~~i~~qIl~aL~~LH--------~~GIIHrDLKP 229 (472)
+ +.+++. . ..++||||++|++|.+++... . ...++.+|+.+|.+|| +.||+||||||
T Consensus 98 i--~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp 175 (342)
T 1b6c_B 98 I--LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175 (342)
T ss_dssp B--CCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSG
T ss_pred E--EEEEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCH
Confidence 3 334432 2 679999999999999876432 1 2348889999999999 89999999999
Q ss_pred CcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccC------CCCcchheeccCchhhhh
Q 012042 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDG------DDGSDIDTDEGSRLSFAS 303 (472)
Q Consensus 230 ~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~------~~~~~sDiySlG~~~f~~ 303 (472)
.|||++.++.++|+|||++............ ......+...+.+|+.+... .++.++||||||++++++
T Consensus 176 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el 250 (342)
T 1b6c_B 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDI-----APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250 (342)
T ss_dssp GGEEECTTSCEEECCCTTCEEEETTTTEEEE-----CCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHEEECCCCCEEEEECCCceecccccccccc-----ccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHH
Confidence 9999999999999999999765432211000 00111233333445443322 233689999999999999
Q ss_pred hhcc----------CCcch------------hhhh----ccCCC---------HHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 304 ISKT----------AGFLD------------KELA----ASGFT---------RKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 304 ~t~~----------~~~l~------------~~~~----~~~~s---------~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
+++. .+... ..+. ...+. ..+.++|.+|+..+|++|||+++-.
T Consensus 251 ~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~ 328 (342)
T 1b6c_B 251 ARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 328 (342)
T ss_dssp HTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred HhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHH
Confidence 9862 11110 0010 11122 3577899999999999999987643
No 247
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.94 E-value=1.7e-27 Score=235.90 Aligned_cols=226 Identities=16% Similarity=0.143 Sum_probs=154.1
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+.+.||+|+||.||+|.+.. .||||+++.........+ .+.+|+.++.++.|+++
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~--------------------~~~~e~~~l~~l~h~~i- 91 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLK--------------------AFKREVMAYRQTRHENV- 91 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCC--------------------CCCTTGGGGTTCCCTTB-
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHH--------------------HHHHHHHHHhcCCCCCE-
Confidence 5678999999999999998753 499999864322111000 12358888888887653
Q ss_pred cceeee----cCCceeEEeecCCCChhhhhccCC-------hHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEE
Q 012042 173 VPNAVD----CNRHCVIMSLVQGYPLVQVNQLQN-------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVT 241 (472)
Q Consensus 173 vP~~i~----~~~~~LVMEyi~G~~L~~l~~~~~-------~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vk 241 (472)
+.+++ ....++||||++|++|.+++.... ...++.+|+.+|.+||++||+||||||.|||++ ++.++
T Consensus 92 -v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~ 169 (319)
T 2y4i_B 92 -VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVV 169 (319)
T ss_dssp -CCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCE
T ss_pred -eEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEE
Confidence 33333 256899999999999998864321 235889999999999999999999999999998 67899
Q ss_pred EEeCCCceecCcccchhhhccccchhhhhccccccccccccc---------cCCCCcchheeccCchhhhhhhccCCcch
Q 012042 242 MIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---------DGDDGSDIDTDEGSRLSFASISKTAGFLD 312 (472)
Q Consensus 242 IIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---------~~~~~~~sDiySlG~~~f~~~t~~~~~l~ 312 (472)
|+|||++.......... .........+...+.+|+.+. ...++.++||||||+++++++++..+...
T Consensus 170 l~Dfg~~~~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 245 (319)
T 2y4i_B 170 ITDFGLFSISGVLQAGR----REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245 (319)
T ss_dssp ECCCSCCC--------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred EeecCCccccccccccc----cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999987543211110 000000111222223444332 24578999999999999999997543211
Q ss_pred h---------------hhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 K---------------ELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 ~---------------~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
. .....+++.++.++|.+|+..+|++|||.++-.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 246 QPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 0112357889999999999999999999887654
No 248
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.94 E-value=9.1e-27 Score=256.30 Aligned_cols=224 Identities=13% Similarity=0.025 Sum_probs=162.6
Q ss_pred eeeecceecccCceeEEEEEeC----CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 92 FTAVGRQLGVGKESDIFEVARE----DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 92 i~~i~~~IG~G~fg~VY~a~~~----~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
-|.+++.||+|+||.||+|.+. .+..||||.++...... .+..+.+|+.+|.++.
T Consensus 391 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~---------------------~~~~~~~E~~~l~~l~ 449 (656)
T 2j0j_A 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS---------------------VREKFLQEALTMRQFD 449 (656)
T ss_dssp GEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHH---------------------HHHHHHHHHHHHHHCC
T ss_pred cEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHH---------------------HHHHHHHHHHHHHhCC
Confidence 4778899999999999999873 24579999876322110 1124568999999998
Q ss_pred hCCCCcceeeec---CCceeEEeecCCCChhhhhccC---Ch----HHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCC
Q 012042 168 DHGFPVPNAVDC---NRHCVIMSLVQGYPLVQVNQLQ---NP----DSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237 (472)
Q Consensus 168 ~~gi~vP~~i~~---~~~~LVMEyi~G~~L~~l~~~~---~~----~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~ 237 (472)
|+++ +.++++ +..++||||++|++|.+++... .+ ..++.+|+.+|.|||++||+||||||.|||++.+
T Consensus 450 HpnI--v~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~ 527 (656)
T 2j0j_A 450 HPHI--VKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN 527 (656)
T ss_dssp CTTB--CCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred CCCC--CeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCC
Confidence 8763 344442 6789999999999999876422 11 2478899999999999999999999999999999
Q ss_pred CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh-ccCCcch---h
Q 012042 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS-KTAGFLD---K 313 (472)
Q Consensus 238 g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t-~~~~~l~---~ 313 (472)
+.++|+|||++.......... ......+..+++|+.+....++.++||||||++++++++ +..+... .
T Consensus 528 ~~vkL~DFG~a~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 599 (656)
T 2j0j_A 528 DCVKLGDFGLSRYMEDSTYYK--------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599 (656)
T ss_dssp TEEEECCCCCCCSCCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred CCEEEEecCCCeecCCCccee--------ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 999999999997654321100 001111222345555556789999999999999999987 5432211 0
Q ss_pred ----h-------hhccCCCHHHHHHHHHHHhcCcccCCCCCCCC
Q 012042 314 ----E-------LAASGFTRKDQDVIQKFIGGSIEESGSDDEGS 346 (472)
Q Consensus 314 ----~-------~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~ 346 (472)
. ..+..++..+.++|.+|+..+|++|||+.+..
T Consensus 600 ~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~ 643 (656)
T 2j0j_A 600 DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 643 (656)
T ss_dssp HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 0 12356788999999999999999999987643
No 249
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=229.08 Aligned_cols=222 Identities=14% Similarity=0.135 Sum_probs=143.6
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++........ ......+..++..+.|+++
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~h~~i 86 (318)
T 2dyl_A 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN--------------------KRILMDLDVVLKSHDCPYI 86 (318)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHH--------------------HHHHHHHHHHHHTTTCTTB
T ss_pred ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHH--------------------HHHHHHHHHHHHhcCCCce
Confidence 56678999999999999999 47999999998744221110 0112233445666666543
Q ss_pred Ccceeeec----CCceeEEeecCCCChhhhhc---cCCh----HHHHHHHHHHHHHHHHC-CceeccCCCCcEEEcCCCc
Q 012042 172 PVPNAVDC----NRHCVIMSLVQGYPLVQVNQ---LQNP----DSVFETIIGLVVRLAEH-GLIHCDFNEFNIMIDDDEK 239 (472)
Q Consensus 172 ~vP~~i~~----~~~~LVMEyi~G~~L~~l~~---~~~~----~~i~~qIl~aL~~LH~~-GIIHrDLKP~NILl~~~g~ 239 (472)
+.+++. +..++||||+ |..+..+.. ...+ ..++.+|+.+|.|||+. ||+||||||.|||++.++.
T Consensus 87 --~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~ 163 (318)
T 2dyl_A 87 --VQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ 163 (318)
T ss_dssp --CCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSC
T ss_pred --eeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCC
Confidence 444432 5679999999 555544432 1112 24889999999999985 9999999999999999999
Q ss_pred EEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-----ccCCCCcchheeccCchhhhhhhccCCcch--
Q 012042 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET-----TDGDDGSDIDTDEGSRLSFASISKTAGFLD-- 312 (472)
Q Consensus 240 vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~-----~~~~~~~~sDiySlG~~~f~~~t~~~~~l~-- 312 (472)
++|+|||.+......... ....+.....+|+.+ ....++.++||||||+++++++++..+...
T Consensus 164 ~kl~dfg~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (318)
T 2dyl_A 164 IKLCDFGISGRLVDDKAK----------DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233 (318)
T ss_dssp EEECCCTTC------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred EEEEECCCchhccCCccc----------cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC
Confidence 999999999755332111 111222333445443 245688899999999999999997543211
Q ss_pred --hh----h---------hccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 313 --KE----L---------AASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 313 --~~----~---------~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
.. + ....++..+.++|.+|+..+|.+||++++..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 234 TDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 0 01357899999999999999999999988776
No 250
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.94 E-value=9.2e-27 Score=243.88 Aligned_cols=224 Identities=15% Similarity=0.103 Sum_probs=152.3
Q ss_pred ceeeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh-hhC
Q 012042 91 VFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL-EDH 169 (472)
Q Consensus 91 ~i~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L-~~~ 169 (472)
.-|.+.+.||+|+||.||.....+|+.||||++...... .+.+|+.+|.++ .|+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-------------------------~~~~E~~~l~~l~~Hp 78 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-------------------------FADREVQLLRESDEHP 78 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-------------------------ECHHHHHHHHHSCCCT
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-------------------------HHHHHHHHHHhccCCC
Confidence 457788999999999977655678999999988532111 123699999998 565
Q ss_pred CCCcceeeec----CCceeEEeecCCCChhhhhccC-------ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcC--
Q 012042 170 GFPVPNAVDC----NRHCVIMSLVQGYPLVQVNQLQ-------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD-- 236 (472)
Q Consensus 170 gi~vP~~i~~----~~~~LVMEyi~G~~L~~l~~~~-------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~-- 236 (472)
++ ..++.. ...||||||++| +|.+++... ....++.||+.+|.|||++||+||||||.|||++.
T Consensus 79 nI--v~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~ 155 (432)
T 3p23_A 79 NV--IRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN 155 (432)
T ss_dssp TB--CCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCB
T ss_pred Cc--CeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCC
Confidence 43 333332 557999999986 777765321 33568999999999999999999999999999953
Q ss_pred -C--CcEEEEeCCCceecCcccchhhhccccchhhhhccccccccccccc---cCCCCcchheeccCchhhhhhh-ccCC
Q 012042 237 -D--EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETT---DGDDGSDIDTDEGSRLSFASIS-KTAG 309 (472)
Q Consensus 237 -~--g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~---~~~~~~~sDiySlG~~~f~~~t-~~~~ 309 (472)
+ ..++|+|||+|.......... .....+.++..+++|+.+. ...++.++||||||++++++++ +..+
T Consensus 156 ~~~~~~~kL~DFG~a~~~~~~~~~~------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~p 229 (432)
T 3p23_A 156 AHGKIKAMISDFGLCKKLAVGRHSF------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229 (432)
T ss_dssp TTTBCCEEECCTTEEECC------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBT
T ss_pred CCCceeEEEecccceeeccCCCcce------eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 2 257899999998654221110 1112233444445666543 4667889999999999999999 4432
Q ss_pred cch---h--hhh--c---------cCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 310 FLD---K--ELA--A---------SGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 310 ~l~---~--~~~--~---------~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
.-. . ... . ...+..+.++|.+|+..+|.+|||+++-..-
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 230 FGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 211 0 000 0 1123346789999999999999999877653
No 251
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.94 E-value=9.9e-27 Score=255.75 Aligned_cols=224 Identities=17% Similarity=0.156 Sum_probs=163.2
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGF 171 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi 171 (472)
|.+.+.||+|+||.||+|.+ .+|+.||||+++...... ....+.+|+.+|.++.|+++
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~---------------------~~~~~~~Ei~iL~~L~HpnI 74 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---------------------NRERWCLEIQIMKKLNHPNV 74 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHH---------------------HHHHHHHHHHHHHHCCBTTB
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHH---------------------HHHHHHHHHHHHHhCCCCCC
Confidence 67889999999999999998 569999999886432110 11245679999999988764
Q ss_pred Ccceeee----------cCCceeEEeecCCCChhhhhccC---------ChHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 012042 172 PVPNAVD----------CNRHCVIMSLVQGYPLVQVNQLQ---------NPDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232 (472)
Q Consensus 172 ~vP~~i~----------~~~~~LVMEyi~G~~L~~l~~~~---------~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NI 232 (472)
..+++ .+..++||||++|++|..++... ....++.+|+.+|.|||+.||+||||||.||
T Consensus 75 --V~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NI 152 (676)
T 3qa8_A 75 --VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 152 (676)
T ss_dssp --CCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTE
T ss_pred --CceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHe
Confidence 22322 24568999999999998876431 1235889999999999999999999999999
Q ss_pred EEcCCCc---EEEEeCCCceecCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhhccCC
Q 012042 233 MIDDDEK---VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASISKTAG 309 (472)
Q Consensus 233 Ll~~~g~---vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t~~~~ 309 (472)
|++.++. ++|+|||.+.....+.. ...+.+.....+|+.+.+..++.++||||||+++|+++++..+
T Consensus 153 Ll~~~g~~~~vKL~DFG~a~~~~~~~~----------~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~P 222 (676)
T 3qa8_A 153 VLQPGPQRLIHKIIDLGYAKELDQGEL----------CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222 (676)
T ss_dssp EEECCSSSCEEEECSCCCCCBTTSCCC----------CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred EeecCCCceeEEEcccccccccccccc----------cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 9997665 89999999986543211 1112333344466666678899999999999999999997543
Q ss_pred cchh--------------------------------h-----hhccCCCHHHHHHHHHHHhcCcccCCCCCCCCCCC
Q 012042 310 FLDK--------------------------------E-----LAASGFTRKDQDVIQKFIGGSIEESGSDDEGSDDG 349 (472)
Q Consensus 310 ~l~~--------------------------------~-----~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~~ 349 (472)
+... . .....++..+.++|.+|+..+|++|||+++.....
T Consensus 223 f~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp 299 (676)
T 3qa8_A 223 FLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVG 299 (676)
T ss_dssp CCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCT
T ss_pred CCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCH
Confidence 2100 0 00122556788999999999999999999877644
No 252
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.93 E-value=1e-26 Score=241.59 Aligned_cols=223 Identities=13% Similarity=0.088 Sum_probs=153.3
Q ss_pred eeecceecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC--
Q 012042 93 TAVGRQLGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-- 169 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-- 169 (472)
+.+++.||+|+||.||+|.+ .+|+.||||+++.....-.. ....+.+|+.++..|.|.
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~-------------------~~~~~~~E~~~~~~l~~~~~ 140 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSN-------------------AIKQMKEEVLRLRLLRGIKN 140 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----------------------CCHHHHHHHHGGGGSTTCCS
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHH-------------------HHHHHHHHHHHHHhhccCCC
Confidence 56779999999999999998 57999999998733211100 001244677777766541
Q ss_pred --------CCCcce----------eee---------cCCceeEEeecCCCChhhhhc------cCC-------hHHHHHH
Q 012042 170 --------GFPVPN----------AVD---------CNRHCVIMSLVQGYPLVQVNQ------LQN-------PDSVFET 209 (472)
Q Consensus 170 --------gi~vP~----------~i~---------~~~~~LVMEyi~G~~L~~l~~------~~~-------~~~i~~q 209 (472)
++.+|. .+. ....+++|+++ +++|.+++. ... ...++.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~q 219 (413)
T 3dzo_A 141 QKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQ 219 (413)
T ss_dssp HHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHH
Confidence 111111 100 12345666655 567776652 111 1236789
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccc-------
Q 012042 210 IIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQET------- 282 (472)
Q Consensus 210 Il~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~------- 282 (472)
|+.+|.|||++|||||||||.||||+.++.+||+|||+++..... .....+ ..+++|+.+
T Consensus 220 i~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------------~~~~~g-~~y~aPE~~~~~~~~~ 286 (413)
T 3dzo_A 220 VIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------------AVSPIG-RGFAPPETTAERMLPF 286 (413)
T ss_dssp HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------------ECCCCC-TTTCCHHHHHHHTSTT
T ss_pred HHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc------------cccCCC-CceeCchhhhcccccc
Confidence 999999999999999999999999999999999999998764322 111233 333455544
Q ss_pred ---ccCCCCcchheeccCchhhhhhhccCCcchh-------hhh--ccCCCHHHHHHHHHHHhcCcccCCCCCCCCCC
Q 012042 283 ---TDGDDGSDIDTDEGSRLSFASISKTAGFLDK-------ELA--ASGFTRKDQDVIQKFIGGSIEESGSDDEGSDD 348 (472)
Q Consensus 283 ---~~~~~~~~sDiySlG~~~f~~~t~~~~~l~~-------~~~--~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~~ 348 (472)
....++.++||||||+++|+++++..+.... .+. ...++..+.++|.+|+..+|++||++.+..+.
T Consensus 287 ~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 287 GQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp GGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 3445788999999999999999976433211 111 25688999999999999999999999877663
No 253
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.93 E-value=2e-26 Score=231.21 Aligned_cols=213 Identities=15% Similarity=0.159 Sum_probs=140.9
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-----
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE----- 167 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~----- 167 (472)
|.+.+.||+|+||.||+|++ +|+.||||+++........ ... ......+.+|+.+|+.|.
T Consensus 22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~---------~~~-----~~~~~~~~~E~~~l~~l~~l~~~ 86 (336)
T 2vuw_A 22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVN---------GSH-----QKTFEEILPEIIISKELSLLSGE 86 (336)
T ss_dssp HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBT---------TBC-----CBCHHHHHHHHHHHHHHHHGGGC
T ss_pred chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccc---------ccc-----chhHHHHHHHHHHHHHHHHhhcc
Confidence 56678999999999999988 6899999998754211000 000 000123557888888886
Q ss_pred ----hCCCC------------cceeee--------------------cCCceeEEeecCCCChhh-hhccCC----hHHH
Q 012042 168 ----DHGFP------------VPNAVD--------------------CNRHCVIMSLVQGYPLVQ-VNQLQN----PDSV 206 (472)
Q Consensus 168 ----~~gi~------------vP~~i~--------------------~~~~~LVMEyi~G~~L~~-l~~~~~----~~~i 206 (472)
|+++. +|+++. .+..||||||++|+++.. +..... ...+
T Consensus 87 ~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i 166 (336)
T 2vuw_A 87 VCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSI 166 (336)
T ss_dssp SSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHH
T ss_pred ccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHH
Confidence 33321 133221 356899999999886544 432222 2358
Q ss_pred HHHHHHHHHHHH-HCCceeccCCCCcEEEcCCC--------------------cEEEEeCCCceecCcccchhhhccccc
Q 012042 207 FETIIGLVVRLA-EHGLIHCDFNEFNIMIDDDE--------------------KVTMIDFPQMVSVSHQNAQMYFDRDVE 265 (472)
Q Consensus 207 ~~qIl~aL~~LH-~~GIIHrDLKP~NILl~~~g--------------------~vkIIDFG~A~~~~~p~a~~~l~rD~~ 265 (472)
+.||+.+|.||| ++|||||||||+|||++.++ .+||+|||+|+....+
T Consensus 167 ~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----------- 235 (336)
T 2vuw_A 167 LHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----------- 235 (336)
T ss_dssp HHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------
T ss_pred HHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------
Confidence 999999999999 99999999999999999877 8999999999865321
Q ss_pred hhhhhccccccccccccccCCCCcchheeccCchh-hhhhhccCCcch---------h------------hhhccCCCHH
Q 012042 266 CIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLS-FASISKTAGFLD---------K------------ELAASGFTRK 323 (472)
Q Consensus 266 ~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~-f~~~t~~~~~l~---------~------------~~~~~~~s~~ 323 (472)
...++.++++|+.+. +..+.++||||++.++ ++..++..+... . ......++.+
T Consensus 236 ---~~~gt~~y~aPE~~~-g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 236 ---IVVFCDVSMDEDLFT-GDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp ---EEECCCCTTCSGGGC-CCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred ---cEEEeecccChhhhc-CCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHH
Confidence 113344445666544 4449999999987663 333333222111 0 0011246778
Q ss_pred HHHHHHHHHhcC
Q 012042 324 DQDVIQKFIGGS 335 (472)
Q Consensus 324 ~~~~l~k~l~~~ 335 (472)
+.++|.+||..+
T Consensus 312 ~~dli~~~L~~d 323 (336)
T 2vuw_A 312 IQEFHRTMLNFS 323 (336)
T ss_dssp HHHHHHHGGGSS
T ss_pred HHHHHHHHhccC
Confidence 889999999865
No 254
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.91 E-value=5.4e-25 Score=238.51 Aligned_cols=184 Identities=13% Similarity=0.133 Sum_probs=110.8
Q ss_pred ecccCceeEEEEEe-CCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcceee
Q 012042 99 LGVGKESDIFEVAR-EDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177 (472)
Q Consensus 99 IG~G~fg~VY~a~~-~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~i 177 (472)
.+.|.+|.+..++. ..|+.||||++........... ......+..+.+|+.+|.++.++ .++|+++
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~------------~~~~~~~~~~~~E~~~l~~~~~~-~~i~~~~ 308 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTA------------EESQRNKYELHNEIKFLTQPPAG-FDAPAVL 308 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCH------------HHHHHHHHHHHHHHHHHHSCCTT-CCCCCEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchh------------hhhHHHHHHHHHHHHHHHhcCCC-CCeeEEE
Confidence 45667776666554 3588999999874321110000 00011233567899999999542 4678888
Q ss_pred ec----CCceeEEeecCCCChhhhhccC---ChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 178 DC----NRHCVIMSLVQGYPLVQVNQLQ---NPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 178 ~~----~~~~LVMEyi~G~~L~~l~~~~---~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
++ +..|||||||+|++|.+++... ....++.||+.+|.|+|++|||||||||+||||+.+|.+||+|||+|+.
T Consensus 309 ~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~ 388 (569)
T 4azs_A 309 AHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVT 388 (569)
T ss_dssp EEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEES
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCee
Confidence 75 6789999999999999987543 4567999999999999999999999999999999999999999999986
Q ss_pred cCcccchhhhccccchhhhhccccccccccccccCCCCcchheeccCchhhhhhh
Q 012042 251 VSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 251 ~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~~~~~~~sDiySlG~~~f~~~t 305 (472)
..... ....+.+++..+++|+. ..+.+...+|+||+|+.++...+
T Consensus 389 ~~~~~---------~~~~t~vGTp~YmAPE~-l~g~~~~~~d~~s~g~~~~~l~~ 433 (569)
T 4azs_A 389 TPQDC---------SWPTNLVQSFFVFVNEL-FAENKSWNGFWRSAPVHPFNLPQ 433 (569)
T ss_dssp CC------------CCSHHHHHHHHHHHHHH-C-----------------CCCCT
T ss_pred CCCCC---------ccccCceechhhccHHH-hCCCCCCcccccccccchhhhcc
Confidence 54321 11223344444445554 46677889999999988766554
No 255
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.85 E-value=1.1e-21 Score=211.27 Aligned_cols=188 Identities=16% Similarity=0.125 Sum_probs=129.4
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
.+.||+|+||.||+|. ..++.+++|............ .....+..+.+|+.+|.+|.|+++..|.
T Consensus 341 ~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~--------------~~~~~~~~~~~E~~il~~l~h~nIv~~~ 405 (540)
T 3en9_A 341 EHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERL--------------DENIRKSRTAREARYLALVKDFGIPAPY 405 (540)
T ss_dssp -------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHH--------------HHHHHHHHHHHHHHHHHHGGGGTCCCCC
T ss_pred CCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhh--------------hhHHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 4689999999999994 457899999865321111000 0011234567999999999999887667
Q ss_pred eeec--CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcCCCcEEEEeCCCceecCc
Q 012042 176 AVDC--NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSH 253 (472)
Q Consensus 176 ~i~~--~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~ 253 (472)
.+.. +..||||||++|++|.+++.. ...++.|++.+|.|||++||+||||||.|||++. .++|+|||+|+....
T Consensus 406 ~~~~~~~~~~lVmE~~~ggsL~~~l~~--~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 406 IFDVDLDNKRIMMSYINGKLAKDVIED--NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EEEEETTTTEEEEECCCSEEHHHHSTT--CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EEEEeCCccEEEEECCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 6654 678999999999999998754 5579999999999999999999999999999997 999999999997754
Q ss_pred ccchhhhccccchh-hhhcccccccccccccc--CCCCcchheeccCchhhhhhh
Q 012042 254 QNAQMYFDRDVECI-FKFFRKRFHLNFQETTD--GDDGSDIDTDEGSRLSFASIS 305 (472)
Q Consensus 254 p~a~~~l~rD~~~i-~~~f~~~y~~~~~~~~~--~~~~~~sDiySlG~~~f~~~t 305 (472)
+.... .+.... ..+.++.++++|+.+.. ..|+..+|+||.....++.+.
T Consensus 482 ~~~~~---~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~ 533 (540)
T 3en9_A 482 DEDKA---VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVE 533 (540)
T ss_dssp HHHHH---HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred ccccc---cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 32211 111111 23455566667776633 445666777766655555544
No 256
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.54 E-value=3e-14 Score=135.81 Aligned_cols=126 Identities=21% Similarity=0.274 Sum_probs=98.6
Q ss_pred eec-ccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 98 QLG-VGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 98 ~IG-~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
.++ .|..+.||++...+|..++||+.... .+. .+.+|+.+|..|.+.++++|.+
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~-----------------------~~~~E~~~l~~l~~~~~~vP~~ 80 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALN-----------------------ELQDEAARLSWLATTGVPCAAV 80 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTS-----------------------CHHHHHHHHHHHHTTTCCBCCE
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc--cch-----------------------hhhHHHHHHHHHHhCCCCCCeE
Confidence 344 56669999997777888999987532 111 1347999999998888999998
Q ss_pred eec----CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHHCC-------------------------------
Q 012042 177 VDC----NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHG------------------------------- 221 (472)
Q Consensus 177 i~~----~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~~G------------------------------- 221 (472)
+.. +..++||||++|.+|. .....+..++.+++..+..||+..
T Consensus 81 ~~~~~~~~~~~~v~e~i~G~~l~--~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
T 1nd4_A 81 LDVVTEAGRDWLLLGEVPGQDLL--SSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDL 158 (264)
T ss_dssp EEEEECSSCEEEEEECCSSEETT--TSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSC
T ss_pred EEeccCCCCCEEEEEecCCcccC--cCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhh
Confidence 875 3569999999999985 333455678888999999998754
Q ss_pred ---------------------------ceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 222 ---------------------------LIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 222 ---------------------------IIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
++|||++|.|||+++++.+.||||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 159 DEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 99999999999998665556999999864
No 257
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.52 E-value=6.1e-14 Score=135.20 Aligned_cols=134 Identities=17% Similarity=0.209 Sum_probs=103.8
Q ss_pred eeecceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC
Q 012042 93 TAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP 172 (472)
Q Consensus 93 ~~i~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~ 172 (472)
|.+...+|.|+++.||++... |..++||+.+....... ..+.+|+.+|..|.. +++
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~----------------------~~~~~E~~~l~~l~~-~~~ 71 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTT----------------------YDVEREKDMMLWLEG-KLP 71 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTST----------------------TCHHHHHHHHHHHTT-TSC
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCH----------------------HHHHHHHHHHHHHhc-CCC
Confidence 345567788889999999754 68999998863210000 024579999999976 688
Q ss_pred cceeeec----CCceeEEeecCCCChhhhh-ccCChHHHHHHHHHHHHHHHH----------------------------
Q 012042 173 VPNAVDC----NRHCVIMSLVQGYPLVQVN-QLQNPDSVFETIIGLVVRLAE---------------------------- 219 (472)
Q Consensus 173 vP~~i~~----~~~~LVMEyi~G~~L~~l~-~~~~~~~i~~qIl~aL~~LH~---------------------------- 219 (472)
+|+++.. +..|+||||++|.+|.... ....+..++.++..++..||+
T Consensus 72 vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T 3tm0_A 72 VPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp CCCEEEEEEETTEEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred CCeEEEEEecCCceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccc
Confidence 9999875 5678999999999998753 223566789999999999998
Q ss_pred -------------------------------CCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 220 -------------------------------HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 220 -------------------------------~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
.+++|||++|.|||+++++.+.||||+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 4599999999999998654456999998863
No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.32 E-value=5.8e-12 Score=127.34 Aligned_cols=133 Identities=19% Similarity=0.291 Sum_probs=98.2
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEee--cCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCc
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHR--LGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r--~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~v 173 (472)
...|+.|.++.||++... +..+++|+.. .+.... +...+.+|+.+|..|...++++
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~---------------------~~~~~~~E~~~l~~L~~~~vpv 100 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLP---------------------SAHAIEREYRVMDALAGTDVPV 100 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC-------------------------------CHHHHHHHHHHHTTSSSCC
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCC---------------------cHHHHHHHHHHHHHhhcCCCCC
Confidence 367899999999999765 4689999775 332100 0113457999999999888999
Q ss_pred ceeeec-------CCceeEEeecCCCChhhh-hccCC---hHHHHHHHHHHHHHHHH-----------------------
Q 012042 174 PNAVDC-------NRHCVIMSLVQGYPLVQV-NQLQN---PDSVFETIIGLVVRLAE----------------------- 219 (472)
Q Consensus 174 P~~i~~-------~~~~LVMEyi~G~~L~~l-~~~~~---~~~i~~qIl~aL~~LH~----------------------- 219 (472)
|+++.. +..++||||++|.++... ..... ...++.+++..|..||.
T Consensus 101 P~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3dxp_A 101 AKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIE 180 (359)
T ss_dssp CCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHH
T ss_pred CcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHH
Confidence 999874 347899999999888532 11112 23478899999999996
Q ss_pred -----------------------------------CCceeccCCCCcEEEcCCCc--EEEEeCCCcee
Q 012042 220 -----------------------------------HGLIHCDFNEFNIMIDDDEK--VTMIDFPQMVS 250 (472)
Q Consensus 220 -----------------------------------~GIIHrDLKP~NILl~~~g~--vkIIDFG~A~~ 250 (472)
.+++|||++|.|||+++++. +.||||+.+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 181 RWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 46999999999999997653 58999999863
No 259
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=99.15 E-value=2e-10 Score=113.74 Aligned_cols=77 Identities=21% Similarity=0.193 Sum_probs=62.3
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcc
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP 174 (472)
...||.|.++.||++...+|+.++||+.+....... ..+.+|++.|..|.+. ++++|
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~----------------------~~~~~E~~~L~~L~~~~~v~vP 77 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALD----------------------GLFRAEALGLDWLGRSFGSPVP 77 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCT----------------------THHHHHHHHHHHHTCSTTCCSC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchh----------------------HHHHHHHHHHHHHHhcCCCCcC
Confidence 468999999999999888899999998653321100 1245799999999886 58999
Q ss_pred eeeecCCceeEEeecCCCCh
Q 012042 175 NAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 175 ~~i~~~~~~LVMEyi~G~~L 194 (472)
+++..+..++||||++|.++
T Consensus 78 ~v~~~~~~~lvme~l~g~~~ 97 (288)
T 3d1u_A 78 QVAGWDDRTLAMEWVDERPP 97 (288)
T ss_dssp CEEEEETTEEEEECCCCCCC
T ss_pred eEEEecCcEEEEEecccCCC
Confidence 99999889999999999764
No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=99.15 E-value=1.5e-10 Score=115.53 Aligned_cols=127 Identities=20% Similarity=0.328 Sum_probs=94.5
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh--CCCCc
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED--HGFPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~--~gi~v 173 (472)
...++.|....||++ |..+++|+.+... . ...+.+|+.+|..|.+ .++++
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~----------------------~~~~~~E~~~L~~L~~~~~~~~v 93 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDS--V----------------------RISQKRELELYRFLENCKLSYQI 93 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHH--H----------------------HHHHHHHHHHHHHHTTSCCSSBC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHH--H----------------------HHHHHHHHHHHHHHHhcCCCCCc
Confidence 367899999999998 6779999864221 0 0124679999999976 57899
Q ss_pred ceeeecCCceeEEeecCCCChhhhh-ccCC---hHHHHHHHHHHHHHHHHC-----------------------------
Q 012042 174 PNAVDCNRHCVIMSLVQGYPLVQVN-QLQN---PDSVFETIIGLVVRLAEH----------------------------- 220 (472)
Q Consensus 174 P~~i~~~~~~LVMEyi~G~~L~~l~-~~~~---~~~i~~qIl~aL~~LH~~----------------------------- 220 (472)
|.++..+..++||||++|.++.... .... ...++.++...+..||+.
T Consensus 94 P~v~~~~~~~lvme~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 94 PAVVYQSDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp CCEEEECSSCEEEECCCCBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred ceEEecCCcEEEEeecCCccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 9999989999999999999886321 1111 134566666666666632
Q ss_pred ----------------------------------CceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 221 ----------------------------------GLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 221 ----------------------------------GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
.++|+|++|.|||+++++.+.||||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 249999999999999855569999999864
No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=99.05 E-value=7.8e-10 Score=106.64 Aligned_cols=127 Identities=17% Similarity=0.247 Sum_probs=90.2
Q ss_pred eecccCce-eEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 98 QLGVGKES-DIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 98 ~IG~G~fg-~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
.+..|..+ .||+.... ++..++||+.+.+. . ..+.+|+..|..|.. +++||+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~--~-----------------------~~~~~E~~~l~~l~~-~vPVP~ 84 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV--A-----------------------NDVTDEMVRLNWLTA-FMPLPT 84 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH--H-----------------------HHHHHHHHHHHHHTT-TSCCCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC--H-----------------------hHHHHHHHHHHHhcc-CCCcCe
Confidence 34455444 69998774 56789999876331 1 124579999999965 699999
Q ss_pred eeec----CCceeEEeecCCCChhhhhcc--CChHHHHHHHHHHHHHHHH------------------------------
Q 012042 176 AVDC----NRHCVIMSLVQGYPLVQVNQL--QNPDSVFETIIGLVVRLAE------------------------------ 219 (472)
Q Consensus 176 ~i~~----~~~~LVMEyi~G~~L~~l~~~--~~~~~i~~qIl~aL~~LH~------------------------------ 219 (472)
++.+ +..++|||+++|.++...... .....++.++...|..||.
T Consensus 85 v~~~~~~~~~~~lvme~l~G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (272)
T 4gkh_A 85 IKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA 164 (272)
T ss_dssp EEEEEEETTEEEEEEECCCSEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCG
T ss_pred EEEEEEECCeEEEEEEeeCCccccccccCCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhh
Confidence 9875 567999999999887664321 1223455555555555552
Q ss_pred ----------------------------CCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 220 ----------------------------HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 220 ----------------------------~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
..++|||++|.|||+++++.+.||||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 165 SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1279999999999999766667999999863
No 262
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=99.01 E-value=8.5e-10 Score=112.62 Aligned_cols=126 Identities=20% Similarity=0.344 Sum_probs=90.1
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
...|+.|....||+... +|..++||+..... .+.+|+.+|..|...++++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~---------------------------~~~~E~~~l~~L~~~gvpvP~ 97 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCAD---------------------------GFYKDRYVYRHFASAALPIPE 97 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCCH---------------------------HHHHHHHHHHHHCCSSSCCCC
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCchh---------------------------hHHHHHHHHHHHHhcCCCCce
Confidence 36789999999999875 57889999875321 134799999999888999999
Q ss_pred eeec-----CCceeEEeecCCCChhhhhccCChHHHHHHHHHHHHHHHH-------------------------------
Q 012042 176 AVDC-----NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAE------------------------------- 219 (472)
Q Consensus 176 ~i~~-----~~~~LVMEyi~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~------------------------------- 219 (472)
++.. +..|+||||++|.++..+.. .....++.++...|..||+
T Consensus 98 vl~~~~~~~g~~~lv~e~l~G~~l~~l~~-~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~ 176 (362)
T 3ovc_A 98 VLDIGEFSESLTYCISRRAQGVTLQDLPE-TELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIA 176 (362)
T ss_dssp EEEEEESSSSCEEEEEECCCSEETTTSCG-GGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGG
T ss_pred EEEeccCCCCCeEEEEEecCCCCcccCCH-HHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHH
Confidence 9864 45799999999977653210 0011123333333333332
Q ss_pred ------------------------------------CCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 220 ------------------------------------HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 220 ------------------------------------~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
..++|+|++|.|||+++++.+.||||+.+..
T Consensus 177 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 177 DPHVYHWQTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp CTTTCCHHHHCCTTTHHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhcccccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 3469999999999998766678999999864
No 263
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.97 E-value=1.2e-09 Score=107.88 Aligned_cols=182 Identities=15% Similarity=0.213 Sum_probs=113.2
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh-hCCCCcce
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE-DHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~-~~gi~vP~ 175 (472)
..++.|....||++. ..++||+.+.. . ....+.+|+.+|..|. +.++++|.
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~----~--------------------~~~~~~~E~~~l~~l~~~~~v~vP~ 77 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS----R--------------------GSTNLFNEVNILKRIHNKLPLPIPE 77 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH----H--------------------HHHHHHHHHHHHHHHTTSSSSCCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc----c--------------------hHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 568999999999873 56999986421 0 0123568999999984 45688999
Q ss_pred eeec-------CCceeEEeecCCCChhhhhccC-C---hHHHHHHHHHHHHHHHH-------------------------
Q 012042 176 AVDC-------NRHCVIMSLVQGYPLVQVNQLQ-N---PDSVFETIIGLVVRLAE------------------------- 219 (472)
Q Consensus 176 ~i~~-------~~~~LVMEyi~G~~L~~l~~~~-~---~~~i~~qIl~aL~~LH~------------------------- 219 (472)
++.. ...|+||+|++|.+|....... . ...++.+++..+..||+
T Consensus 78 ~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
T 3sg8_A 78 VVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKI 157 (304)
T ss_dssp EEEECCCCSSCSCSCEEEECCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHH
T ss_pred eEeecCCCCCCCcceEEEcccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHH
Confidence 8865 2358899999999886532111 1 22466677777776664
Q ss_pred ---------------------------------CCceeccCCCCcEEEcC--CCcEEEEeCCCceecCcccc-hhhhccc
Q 012042 220 ---------------------------------HGLIHCDFNEFNIMIDD--DEKVTMIDFPQMVSVSHQNA-QMYFDRD 263 (472)
Q Consensus 220 ---------------------------------~GIIHrDLKP~NILl~~--~g~vkIIDFG~A~~~~~p~a-~~~l~rD 263 (472)
..++|||++|.|||+++ ++.+.||||+.+..- +|.. ...+..+
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~-~~~~Dl~~~~~~ 236 (304)
T 3sg8_A 158 KKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS-DPDNDFISLMED 236 (304)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE-CTTHHHHTTCCT
T ss_pred HHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC-ChHHHHHHHHhh
Confidence 24799999999999997 455789999998643 3321 1111111
Q ss_pred -----cchhhhhccccccccc-cccccCCCCcchheeccCchhhhhhhccCC
Q 012042 264 -----VECIFKFFRKRFHLNF-QETTDGDDGSDIDTDEGSRLSFASISKTAG 309 (472)
Q Consensus 264 -----~~~i~~~f~~~y~~~~-~~~~~~~~~~~sDiySlG~~~f~~~t~~~~ 309 (472)
......++ ..|+... +.+ ........+.|++++.++...++..+
T Consensus 237 ~~~~~~~~~~~~l-~~Y~~~~~~~~-~~r~~~~~~~~~l~~~~~~~~~g~~~ 286 (304)
T 3sg8_A 237 DEEYGMEFVSKIL-NHYKHKDIPTV-LEKYRMKEKYWSFEKIIYGKEYGYMD 286 (304)
T ss_dssp TTSCCHHHHHHHH-HHHTCSCHHHH-HHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ccccCHHHHHHHH-HHcCCCCcHHH-HHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 01111122 2243322 111 11223345778888888888776543
No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.94 E-value=1e-09 Score=110.42 Aligned_cols=78 Identities=14% Similarity=0.204 Sum_probs=56.5
Q ss_pred cee-cccCceeEEEEEeC-------CCCEEEEEEeecCcc--hhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHh
Q 012042 97 RQL-GVGKESDIFEVARE-------DGTVLAMKLHRLGRT--SFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKAL 166 (472)
Q Consensus 97 ~~I-G~G~fg~VY~a~~~-------~g~~VAVKi~r~~~~--sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L 166 (472)
..| +.|....+|+.... ++..+++|+...+.. .+.. ....+|+.+|..|
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~---------------------~~~~~E~~~l~~L 84 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPT---------------------YRLDHQFEVIRLV 84 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSC---------------------CCHHHHHHHHHHH
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCch---------------------hHHHHHHHHHHHH
Confidence 567 88999999998754 267899998754320 0000 0234799999999
Q ss_pred hhC-CCCcceeeec-------CCceeEEeecCCCChh
Q 012042 167 EDH-GFPVPNAVDC-------NRHCVIMSLVQGYPLV 195 (472)
Q Consensus 167 ~~~-gi~vP~~i~~-------~~~~LVMEyi~G~~L~ 195 (472)
... ++++|+++.. +..++||||++|.++.
T Consensus 85 ~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 85 GELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp HHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred hhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChh
Confidence 886 8999999864 2468999999997764
No 265
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.93 E-value=2e-09 Score=107.02 Aligned_cols=126 Identities=18% Similarity=0.154 Sum_probs=87.0
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcce
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP~ 175 (472)
..++.|....||+. |..++||+.+.. .. ...+.+|+.+|..|.+. .+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~----------------------~~~~~~E~~~L~~L~~~~~v~VP~ 76 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQ--QG----------------------ADELNKEIQLLPLLVGCVKVNIPQ 76 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH--HH----------------------HHHHHHHHHHHHHHTTTCSSBCCC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCc--hH----------------------HHHHHHHHHHHHHHHhcCCCCCCC
Confidence 56788888899998 567899985311 00 12356899999999864 578899
Q ss_pred eeecC-----CceeEEeecCCCChhhhhcc--C--ChHHHHHHHHHHHHHHHH---------------------------
Q 012042 176 AVDCN-----RHCVIMSLVQGYPLVQVNQL--Q--NPDSVFETIIGLVVRLAE--------------------------- 219 (472)
Q Consensus 176 ~i~~~-----~~~LVMEyi~G~~L~~l~~~--~--~~~~i~~qIl~aL~~LH~--------------------------- 219 (472)
++..+ ..++||+|++|.++....-. . ....++.++...|..||+
T Consensus 77 ~~~~~~~~~g~~~~v~e~i~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~ 156 (306)
T 3tdw_A 77 YVYIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAV 156 (306)
T ss_dssp EEEEEECTTSCEEEEEECCCSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHH
T ss_pred eEeecccCCCceEEEEeccCCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHH
Confidence 88754 37899999999988652110 0 112234444444444432
Q ss_pred ---------------------------------CCceeccCCCCcEEEcC---CCcE-EEEeCCCcee
Q 012042 220 ---------------------------------HGLIHCDFNEFNIMIDD---DEKV-TMIDFPQMVS 250 (472)
Q Consensus 220 ---------------------------------~GIIHrDLKP~NILl~~---~g~v-kIIDFG~A~~ 250 (472)
..++|||++|.|||+++ ++.+ .||||+.+..
T Consensus 157 ~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 157 EDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 24699999999999987 4565 7999998864
No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.92 E-value=4.3e-09 Score=104.26 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=49.1
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..|+.|..+.||++...+| .+++|+.+... . .+..|+.++..|...|+++|.+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~---~-----------------------~~~~e~~~l~~L~~~g~~vp~~ 90 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE---K-----------------------KALFSIFAQDYLAKKGMNVPGI 90 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH---H-----------------------HHHHHHHHHHHHHHHTCSSCCB
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH---H-----------------------HHHHHHHHHHHHHHcCCCCCce
Confidence 4566778999999987655 59999886321 1 1235778888888778889998
Q ss_pred eec----------CCceeEEeecCCCCh
Q 012042 177 VDC----------NRHCVIMSLVQGYPL 194 (472)
Q Consensus 177 i~~----------~~~~LVMEyi~G~~L 194 (472)
+.. +..+++|+|++|.++
T Consensus 91 ~~~~~g~~~~~~~~~~~~l~~~i~G~~~ 118 (346)
T 2q83_A 91 LPNKKGSLYSKHGSFLFVVYDWIEGRPF 118 (346)
T ss_dssp CCCTTSCSCEEETTEEEEEEECCCCBCC
T ss_pred eecCCCCEEEEECCEEEEEEEeecCccC
Confidence 852 456899999999754
No 267
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.90 E-value=1.3e-08 Score=99.66 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=61.3
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcc
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVP 174 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP 174 (472)
...+|.|..+.||+....+|+.|+||+...+..... ..+.+|+..|..|... ++++|
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~----------------------~~~~~Ea~~L~~L~~~~~vpvP 77 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALD----------------------GLFRAEALGLDWLGRSFGSPVP 77 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCT----------------------THHHHHHHHHHHHTCSTTCCSC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchh----------------------hHHHHHHHHHHHHHhhCCCCcc
Confidence 478899999999999999999999998754332211 0245799999999764 69999
Q ss_pred eeeecCCceeEEeecCCCC
Q 012042 175 NAVDCNRHCVIMSLVQGYP 193 (472)
Q Consensus 175 ~~i~~~~~~LVMEyi~G~~ 193 (472)
.++..+..++||||+++..
T Consensus 78 ~v~~~~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 78 QVAGWDDRTLAMEWVDERP 96 (288)
T ss_dssp CEEEEETTEEEEECCCCCC
T ss_pred eEEeccCceEEEEeecccC
Confidence 9999999999999998754
No 268
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=98.84 E-value=1.1e-08 Score=101.21 Aligned_cols=129 Identities=22% Similarity=0.254 Sum_probs=83.1
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..|+.|....||++...+| .+++|+++.... . ..+..|+.++..|...|+++|.+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-~-----------------------~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-K-----------------------NDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----C-----------------------CHHHHHHHHHHHHHHTTCCCCCB
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCC-H-----------------------HHHHHHHHHHHHHHHCCCCCCcc
Confidence 5677888899999987655 688998864210 0 02346899999999889999998
Q ss_pred eec----------CCceeEEeecCCCChhhh--------------hc-----cCC-------hHHH---H----------
Q 012042 177 VDC----------NRHCVIMSLVQGYPLVQV--------------NQ-----LQN-------PDSV---F---------- 207 (472)
Q Consensus 177 i~~----------~~~~LVMEyi~G~~L~~l--------------~~-----~~~-------~~~i---~---------- 207 (472)
+.. +..+++|+|++|.++... ++ ... ...+ +
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 853 346889999999764210 00 000 0000 0
Q ss_pred -----HHHHHHHHHHH-------HCCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 208 -----ETIIGLVVRLA-------EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 208 -----~qIl~aL~~LH-------~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
..+...+..+. ..+++|+|++|.|||+++++.+.||||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 01223344443 24799999999999998765457999998864
No 269
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=98.77 E-value=2.7e-08 Score=99.27 Aligned_cols=129 Identities=12% Similarity=0.174 Sum_probs=77.1
Q ss_pred ceecccCcee-EEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESD-IFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~-VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..|+.|.... +|+....+|..+++|....... . ....|+.++..|...|+++|.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~--~-----------------------~~~~e~~~l~~L~~~g~~vP~ 78 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG--G-----------------------DTQPFVDLAQYLRNLDISAPE 78 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT--C-----------------------CSHHHHHHHHHHHHTTCBCCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC--c-----------------------cccHHHHHHHHHHhCCCCCCc
Confidence 4566665554 6677654477888886543210 0 123588999999988999999
Q ss_pred eeec--CCceeEEeecCCCChhhhhccC-----------------------------ChHHH----------HH------
Q 012042 176 AVDC--NRHCVIMSLVQGYPLVQVNQLQ-----------------------------NPDSV----------FE------ 208 (472)
Q Consensus 176 ~i~~--~~~~LVMEyi~G~~L~~l~~~~-----------------------------~~~~i----------~~------ 208 (472)
++.. ...+++||+++|..+...+... ....+ +.
T Consensus 79 v~~~d~~~g~ll~e~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (333)
T 3csv_A 79 IYAEEHARGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGD 158 (333)
T ss_dssp EEEEETTTTEEEECCCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSS
T ss_pred eeeecCCCCEEEEeeCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9884 4458999999876654321100 00000 00
Q ss_pred -------HHHHHHHHH------HHCCceeccCCCCcEEEcCC----CcEEEEeCCCcee
Q 012042 209 -------TIIGLVVRL------AEHGLIHCDFNEFNIMIDDD----EKVTMIDFPQMVS 250 (472)
Q Consensus 209 -------qIl~aL~~L------H~~GIIHrDLKP~NILl~~~----g~vkIIDFG~A~~ 250 (472)
.+...+..+ +...++|||++|.|||++++ +.+.||||+.+..
T Consensus 159 ~~~~~~~~l~~~~~~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 159 AAEDNRKRFEHRFAQILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CcHHHHHHHHHHHHHHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 011112222 13479999999999999864 6799999999864
No 270
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.76 E-value=2.5e-08 Score=102.03 Aligned_cols=82 Identities=16% Similarity=0.173 Sum_probs=51.4
Q ss_pred cceecccCceeEEEEEeC-CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCc
Q 012042 96 GRQLGVGKESDIFEVARE-DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPV 173 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~-~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~v 173 (472)
...||.|.++.||++... +++.|+||.......... . . |. ....+..+|+.+|..+... ...+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~---~--~---------~~-~~~~r~~~E~~~L~~l~~~~~~~v 99 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVG---E--S---------WP-LTIDRARIESSALIRQGEHVPHLV 99 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC---------------------CC-CCTTHHHHHHHHHHHHHTTCGGGS
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccC---C--C---------Cc-CcHHHHHHHHHHHHHhhhhCCCCc
Confidence 368999999999999764 578999998653211000 0 0 00 0011245688999888653 3467
Q ss_pred ceeeec--CCceeEEeecCCC
Q 012042 174 PNAVDC--NRHCVIMSLVQGY 192 (472)
Q Consensus 174 P~~i~~--~~~~LVMEyi~G~ 192 (472)
|.++.. ...++||||++|.
T Consensus 100 P~~~~~d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 100 PRVFYSDTEMAVTVMEDLSHL 120 (397)
T ss_dssp CCEEEEETTTTEEEECCCTTS
T ss_pred CeEEEEcCCccEEEEEeCCCc
Confidence 887754 5678999999874
No 271
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=98.75 E-value=3.7e-08 Score=97.67 Aligned_cols=74 Identities=22% Similarity=0.277 Sum_probs=54.9
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCccee
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~~ 176 (472)
..++ |....||++...+|+.+++|+++.+..+. ..+..|+.++..|...|+++|.+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~-----------------------~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTA-----------------------DQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCH-----------------------HHHHHHHHHHHHHHHTTCSBCCC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCH-----------------------HHHHHHHHHHHHHHHcCCeecce
Confidence 4566 88899999877778789999987442111 12346899999999889999998
Q ss_pred eec---------CCceeEEeecCCCCh
Q 012042 177 VDC---------NRHCVIMSLVQGYPL 194 (472)
Q Consensus 177 i~~---------~~~~LVMEyi~G~~L 194 (472)
+.. +..+++|+|++|.++
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCC
Confidence 864 234679999998653
No 272
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=98.73 E-value=1.8e-08 Score=99.38 Aligned_cols=124 Identities=12% Similarity=0.131 Sum_probs=83.1
Q ss_pred cceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 96 GRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 96 ~~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..+|+.|....+|++ ..+++|+...+...+. ...+|+.++..+...|+. |+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~-----------------------~r~~E~~~l~~l~~~g~~-P~ 73 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYI-----------------------NRANEAVAAREAAKAGVS-PE 73 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CC-----------------------CHHHHHHHHHHHHHTTSS-CC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcccee-----------------------CHHHHHHHHHHHHHcCCC-Cc
Confidence 367889999999999 5689998865432211 013699999999999987 99
Q ss_pred eeecCC--ceeEEeec-CCCChhhhhccCChHHHHHHHHHHHHHHHH---------------------------------
Q 012042 176 AVDCNR--HCVIMSLV-QGYPLVQVNQLQNPDSVFETIIGLVVRLAE--------------------------------- 219 (472)
Q Consensus 176 ~i~~~~--~~LVMEyi-~G~~L~~l~~~~~~~~i~~qIl~aL~~LH~--------------------------------- 219 (472)
++.... .+++|||+ +|.++...... ....++.+++..|..||.
T Consensus 74 ~~~~~~~~~~~v~e~i~~g~~l~~~~~~-~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (301)
T 3dxq_A 74 VLHVDPATGVMVTRYIAGAQTMSPEKFK-TRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGY 152 (301)
T ss_dssp EEEECTTTCCEEEECCTTCEECCHHHHH-HSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTH
T ss_pred eEEEECCCCEEEEeecCCCccCCHhhHh-hhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhH
Confidence 988754 78999999 88765421000 000122233333333332
Q ss_pred --------------------CCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 220 --------------------HGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 220 --------------------~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
..++|+|++|.||| ..++.+.||||..+..
T Consensus 153 ~~l~~~~~~l~~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 153 HDVVREAGGVRSALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 23899999999999 4567899999998863
No 273
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=98.66 E-value=1.3e-07 Score=95.42 Aligned_cols=66 Identities=11% Similarity=0.151 Sum_probs=51.0
Q ss_pred cccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCC-cceeee
Q 012042 100 GVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFP-VPNAVD 178 (472)
Q Consensus 100 G~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~-vP~~i~ 178 (472)
|.|....||+....+| .+++|+.+.... ..|+.+|..|...|++ ||.++.
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~----------------------------~~E~~~l~~L~~~g~~~vp~pi~ 82 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD----------------------------EINLSIIRLLHDSGIKEIIFPIH 82 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC----------------------------CHHHHHHHHHHHTTCCSSCCCCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc----------------------------hHHHHHHHHHHhcCCccccccee
Confidence 4444789999987767 999998864320 1488899999888999 999886
Q ss_pred c----------CCceeEEeecCCCCh
Q 012042 179 C----------NRHCVIMSLVQGYPL 194 (472)
Q Consensus 179 ~----------~~~~LVMEyi~G~~L 194 (472)
. +..+++|+|++|.++
T Consensus 83 ~~~G~~~~~~~g~~~~l~~~i~G~~~ 108 (339)
T 3i1a_A 83 TLEAKLFQQLKHFKIIAYPFIHAPNG 108 (339)
T ss_dssp CTTSCSSEECSSEEEEEEECCCCCBT
T ss_pred cCCCCEEEEECCEEEEEEeccCCCcC
Confidence 3 346899999999765
No 274
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.63 E-value=1.7e-07 Score=93.93 Aligned_cols=72 Identities=13% Similarity=0.149 Sum_probs=57.1
Q ss_pred ceecccCceeEEEEEeCCCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhC-CCCcce
Q 012042 97 RQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDH-GFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~-gi~vP~ 175 (472)
..|+.|.+..+|+... ++..++||+..... ...+.+|+..|..|... +++||.
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~-------------------------~~~~~~E~~~L~~L~~~~~v~VP~ 95 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERSY-------------------------RSMFRAEADQLALLAKTNSINVPL 95 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGGG-------------------------HHHHHHHHHHHHHHHHTTSSBCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCccc-------------------------HHHHHHHHHHHHHHHhhCCCCcce
Confidence 6789999999999976 46789999875321 11345799999999876 699999
Q ss_pred eeec----CCceeEEeecCCCCh
Q 012042 176 AVDC----NRHCVIMSLVQGYPL 194 (472)
Q Consensus 176 ~i~~----~~~~LVMEyi~G~~L 194 (472)
++.. +..++||||++|.++
T Consensus 96 vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 96 VYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEEEEECSSEEEEEEECCCCCCC
T ss_pred EEEEeecCCceEEEEEeccCCCC
Confidence 9875 468999999998764
No 275
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=98.60 E-value=9.2e-08 Score=96.95 Aligned_cols=74 Identities=19% Similarity=0.295 Sum_probs=52.7
Q ss_pred ceecccCceeEEEEEeCC---------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhh
Q 012042 97 RQLGVGKESDIFEVARED---------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALE 167 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~---------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~ 167 (472)
..|+.|-...||++...+ +..+++|+...+...+. ....|+.+|..|.
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~-----------------------~~~~E~~~l~~L~ 95 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELY-----------------------NTISEFEVYKTMS 95 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTS-----------------------CHHHHHHHHHHHH
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcccee-----------------------cHHHHHHHHHHHH
Confidence 567888889999998753 27899998864422111 0136999999999
Q ss_pred hCCCCcceeeecCCceeEEeecCCCCh
Q 012042 168 DHGFPVPNAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 168 ~~gi~vP~~i~~~~~~LVMEyi~G~~L 194 (472)
..|+ +|.++.....++||+|++|.++
T Consensus 96 ~~g~-~P~~~~~~~~~~v~e~i~G~~l 121 (369)
T 3c5i_A 96 KYKI-APQLLNTFNGGRIEEWLYGDPL 121 (369)
T ss_dssp HTTS-SCCEEEEETTEEEEECCCSEEC
T ss_pred hcCC-CCceEEecCCcEEEEEecCCcC
Confidence 8888 9999887667899999999654
No 276
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=98.43 E-value=3.2e-07 Score=94.89 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=27.5
Q ss_pred HCCceeccCCCCcEEEcCCCcEEEEeCCCcee
Q 012042 219 EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250 (472)
Q Consensus 219 ~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~ 250 (472)
...++|||++|.|||+++++ ++||||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 56899999999999998766 99999999864
No 277
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=98.41 E-value=1.3e-06 Score=89.90 Aligned_cols=130 Identities=15% Similarity=0.186 Sum_probs=81.4
Q ss_pred ceecccCceeEEEEEeC--------CCCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 97 RQLGVGKESDIFEVARE--------DGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~--------~g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
..|..|-...+|++..+ +++.|++|+........ ....+|+.++..|..
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~-----------------------~~~~rE~~vl~~L~~ 112 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGV-----------------------DSLVLESVMFAILAE 112 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCH-----------------------HHHHHHHHHHHHHHH
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchH-----------------------HHHHHHHHHHHHHHh
Confidence 56777888899999874 25789999863211111 123479999999999
Q ss_pred CCCCcceeeecCCceeEEeecCCCChhhh--h---------------c-cC-----ChHHHHHHHHH-------------
Q 012042 169 HGFPVPNAVDCNRHCVIMSLVQGYPLVQV--N---------------Q-LQ-----NPDSVFETIIG------------- 212 (472)
Q Consensus 169 ~gi~vP~~i~~~~~~LVMEyi~G~~L~~l--~---------------~-~~-----~~~~i~~qIl~------------- 212 (472)
.|+ .|+++......+||||++|.+|... . + .. .+..++.+|-.
T Consensus 113 ~gv-~P~ll~~~~~g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~ 191 (379)
T 3feg_A 113 RSL-GPQLYGVFPEGRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGL 191 (379)
T ss_dssp TTS-SCCEEEEETTEEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSC
T ss_pred cCC-CCeEEEEcCCccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCccc
Confidence 888 5999887555699999999765321 0 0 00 01001121111
Q ss_pred -------------HHHHHH--------HCCceeccCCCCcEEEcCC----CcEEEEeCCCcee
Q 012042 213 -------------LVVRLA--------EHGLIHCDFNEFNIMIDDD----EKVTMIDFPQMVS 250 (472)
Q Consensus 213 -------------aL~~LH--------~~GIIHrDLKP~NILl~~~----g~vkIIDFG~A~~ 250 (472)
.+..|. ...++|+|+.+.|||++++ +.+.||||..|..
T Consensus 192 ~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 192 PEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp CSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred chhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 122221 1359999999999999876 6899999999863
No 278
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=98.41 E-value=8.7e-07 Score=92.39 Aligned_cols=73 Identities=11% Similarity=0.099 Sum_probs=54.2
Q ss_pred ceecccCceeEEEEEeCC--------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 97 RQLGVGKESDIFEVARED--------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~--------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
..|+.|-...||++..++ +..+++|++..... .. .+.+|+.++..|..
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-~~-----------------------~li~E~~~l~~L~~ 134 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-ES-----------------------HLVAESVIFTLLSE 134 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-HH-----------------------HHHHHHHHHHHHHH
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-HH-----------------------HHHHHHHHHHHHHh
Confidence 678889899999998753 57899999843111 01 11258999999988
Q ss_pred CCCCcceeeecCCceeEEeecCCCCh
Q 012042 169 HGFPVPNAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 169 ~gi~vP~~i~~~~~~LVMEyi~G~~L 194 (472)
.|+ .|+++......+||||++|.+|
T Consensus 135 ~g~-~P~l~~~~~~g~v~e~l~G~~l 159 (429)
T 1nw1_A 135 RHL-GPKLYGIFSGGRLEEYIPSRPL 159 (429)
T ss_dssp TTS-SSCEEEEETTEEEECCCCEEEC
T ss_pred CCC-CCcEEEEeCCCEEEEEeCCccc
Confidence 887 6998886556799999998554
No 279
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=98.27 E-value=3.7e-06 Score=88.51 Aligned_cols=74 Identities=12% Similarity=0.090 Sum_probs=53.2
Q ss_pred ceecccCceeEEEEEeCC-CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhhCCCCcce
Q 012042 97 RQLGVGKESDIFEVARED-GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPN 175 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~-g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~~gi~vP~ 175 (472)
..|+.|-...+|++...+ +..+++|++..+...+.. -.+|+.+|..|...++ .|.
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~id-----------------------R~~E~~vl~~L~~~gl-~P~ 169 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIIN-----------------------REREKKISCILYNKNI-AKK 169 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSC-----------------------HHHHHHHHHHHTTSSS-BCC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcC-----------------------HHHHHHHHHHHHhcCC-CCC
Confidence 678889899999998764 578999988543222210 1369999999988876 688
Q ss_pred eeecCCceeEEeecCCCCh
Q 012042 176 AVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 176 ~i~~~~~~LVMEyi~G~~L 194 (472)
++......+||||++|.+|
T Consensus 170 ll~~~~~G~v~e~I~G~~l 188 (458)
T 2qg7_A 170 IYVFFTNGRIEEFMDGYAL 188 (458)
T ss_dssp EEEEETTEEEEECCCSEEC
T ss_pred EEEEeCCeEEEEeeCCccC
Confidence 8876556789999998654
No 280
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=98.16 E-value=5e-06 Score=86.75 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=56.9
Q ss_pred ceecccCceeEEEEEeCC--------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 97 RQLGVGKESDIFEVARED--------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~--------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
.+|..|-...+|++...+ +..+++|+...+...+.. ..+|+.++..|..
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~id-----------------------R~~E~~~l~~L~~ 132 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYD-----------------------SKVELDVFRYLSN 132 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCC-----------------------HHHHHHHHHHHHH
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcC-----------------------HHHHHHHHHHHHh
Confidence 667788888999998753 588999997654322210 1369999999998
Q ss_pred CCCCcceeeecCCceeEEeecCCCCh
Q 012042 169 HGFPVPNAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 169 ~gi~vP~~i~~~~~~LVMEyi~G~~L 194 (472)
.|+ +|.++.....++||+|++|.+|
T Consensus 133 ~gi-~P~l~~~~~~~~I~efI~G~~l 157 (424)
T 3mes_A 133 INI-APNIIADFPEGRIEEFIDGEPL 157 (424)
T ss_dssp TTS-SCCEEEEETTEEEEECCCSEEC
T ss_pred cCC-CCCEEEEcCCCEEEEEeCCccC
Confidence 887 8999987778999999999764
No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=98.08 E-value=1.6e-05 Score=82.34 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=54.7
Q ss_pred ceecccCceeEEEEEeCC--------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 97 RQLGVGKESDIFEVARED--------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~--------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
..|..|-...+|++..++ +..|+++++-.++..|.--+.....+ .|.+ .+. .......|+.+|..|..
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~i-dR~~--~~~-~~~~~~~E~~~l~~L~~ 133 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQA-QKEN--EFQ-GAEAMVLESVMFAILAE 133 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC---------------------------CHHHHHHHHHHHHHHH
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchh-hhhh--hhc-cchhhHHHHHHHHHHHh
Confidence 567678888999987753 37899999865432210000000000 0000 000 00123359999999999
Q ss_pred CCCCcceeeecCCceeEEeecCCCCh
Q 012042 169 HGFPVPNAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 169 ~gi~vP~~i~~~~~~LVMEyi~G~~L 194 (472)
.|+ .|+++......+|+||++|.+|
T Consensus 134 ~Gi-~Pkl~~~~~~G~i~efI~G~~L 158 (401)
T 3f2s_A 134 RSL-GPKLYGIFPQGRLEQFIPSRRL 158 (401)
T ss_dssp TTS-SCCEEEEETTEEEEECCCEEEC
T ss_pred cCC-CCeEEEEeCCCeEEEecCCccC
Confidence 888 8999987666799999998665
No 282
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=97.56 E-value=0.00046 Score=70.85 Aligned_cols=93 Identities=12% Similarity=0.104 Sum_probs=50.1
Q ss_pred ceecccCceeEEEEEeCC--------CCEEEEEEeecCcchhHHhhhhhHHhhhccchhhHHHhHHHHHHHHHHHHHhhh
Q 012042 97 RQLGVGKESDIFEVARED--------GTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALED 168 (472)
Q Consensus 97 ~~IG~G~fg~VY~a~~~~--------g~~VAVKi~r~~~~sf~~~k~~r~yl~~~~~~~~~~~~r~~a~rE~~~L~~L~~ 168 (472)
+.|+-|-.=.+|++..++ .+.|+++++..+...+..-+..+.++..... .........|..++..+..
T Consensus 58 ~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~~~~~~~~~~~~----~~~~~~~~~e~~~~~~ls~ 133 (401)
T 3g15_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENE----FQGAEAMVLESVMFAILAE 133 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC---------------------------CHHHHHHHHHHHHHHH
T ss_pred EEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhhHHHHHHHHHHh----ccCCCCCcchhHHHHHHHh
Confidence 677777788899998653 3579999886554332211111111100000 0000112356777777766
Q ss_pred CCCCcceeeecCCceeEEeecCCCCh
Q 012042 169 HGFPVPNAVDCNRHCVIMSLVQGYPL 194 (472)
Q Consensus 169 ~gi~vP~~i~~~~~~LVMEyi~G~~L 194 (472)
.|+ .|.++......++++|++|.+|
T Consensus 134 ~g~-~p~l~~~f~~g~i~e~i~g~~l 158 (401)
T 3g15_A 134 RSL-GPKLYGIFPQGRLEQFIPSRRL 158 (401)
T ss_dssp TTS-SCCEEEEETTEEEEECCCEEEC
T ss_pred CCC-CCEEEEEECCcEEEEecCCCcC
Confidence 664 5888887677889999998654
No 283
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=92.88 E-value=0.14 Score=51.34 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=43.0
Q ss_pred CceeEEeecCCCChhhhhccC----ChHHHHHHHHHHH--HHHHHC----Ccee-ccCCCCcEEEcCCCc-EEEEeCCCc
Q 012042 181 RHCVIMSLVQGYPLVQVNQLQ----NPDSVFETIIGLV--VRLAEH----GLIH-CDFNEFNIMIDDDEK-VTMIDFPQM 248 (472)
Q Consensus 181 ~~~LVMEyi~G~~L~~l~~~~----~~~~i~~qIl~aL--~~LH~~----GIIH-rDLKP~NILl~~~g~-vkIIDFG~A 248 (472)
...++|+|++|.+|....... .....+.++...+ ..+..+ .++. .--+|.|||+..++. +.+||-+++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn~a 235 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSKII 235 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCCCC
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCCcc
Confidence 456999999998877653221 1233444443333 233322 1222 236899999986544 999999998
Q ss_pred eec
Q 012042 249 VSV 251 (472)
Q Consensus 249 ~~~ 251 (472)
...
T Consensus 236 f~~ 238 (342)
T 1cja_A 236 PLD 238 (342)
T ss_dssp CCC
T ss_pred ccC
Confidence 643
No 284
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=84.14 E-value=0.88 Score=38.57 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=56.6
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHH
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFL 81 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~ 81 (472)
+..+++..+++|.++........-+....+++..+++...+...++.|.+.|+|.+.. .+|.+|..|....
T Consensus 8 ~~~lt~~~~~~L~~l~~l~~~~~~~s~~ela~~l~is~~tv~~~l~~Le~~Gli~r~~---~~~~Lt~~g~~~~ 78 (139)
T 2x4h_A 8 MSNLSRREFSYLLTIKRYNDSGEGAKINRIAKDLKIAPSSVFEEVSHLEEKGLVKKKE---DGVWITNNGTRSI 78 (139)
T ss_dssp ---CCHHHHHHHHHHHHHHTTTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET---TEEEECHHHHHHH
T ss_pred HhhcCHHHHHHHHHHHHHHhcCCCcCHHHHHHHhCCChHHHHHHHHHHHHCCCEEecC---CeEEEChhHHHHH
Confidence 4578999999999887654556678888999999999999999999999999998765 5788887776543
No 285
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=79.34 E-value=2.5 Score=35.63 Aligned_cols=68 Identities=16% Similarity=0.133 Sum_probs=48.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~~ 81 (472)
.|++.+++||..+... .-+....++...+++...+...+.+|.+.|+|.+...+-|+ +.+|..|...+
T Consensus 34 ~lt~~~~~vL~~l~~~----~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 105 (142)
T 3ech_A 34 DLTPPDVHVLKLIDEQ----RGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIH 105 (142)
T ss_dssp CCCHHHHHHHHHHHHT----TTCCHHHHHHHHC---CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC----CCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHH
Confidence 5899999999999764 24678888889999999999999999999999987655443 55676665544
No 286
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=78.57 E-value=2 Score=36.59 Aligned_cols=70 Identities=17% Similarity=0.048 Sum_probs=50.1
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~~a 82 (472)
.|+..+|+||..+... .+-+....++...+++...+...+.+|.+.|+|.+...+-|+ +.+|..|...+.
T Consensus 36 glt~~q~~vL~~l~~~---~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 109 (150)
T 3fm5_A 36 GLRVRSYSVLVLACEQ---AEGVNQRGVAATMGLDPSQIVGLVDELEERGLVVRTLDPSDRRNKLIAATEEGRRLRD 109 (150)
T ss_dssp TCCHHHHHHHHHHHHS---TTCCCSHHHHHHHTCCHHHHHHHHHHHHTTTSEEC-----------CEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC---CCCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeeCCccccchheeeECHHHHHHHH
Confidence 5899999999998643 223677778888899999999999999999999987665554 556666655443
No 287
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=78.53 E-value=2.7 Score=35.45 Aligned_cols=68 Identities=21% Similarity=0.128 Sum_probs=54.4
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
.|++.+|+||..+...- -+....++...+++...+...+..|.+.|+|.+...+-| -+.+|..|...+
T Consensus 28 ~lt~~q~~iL~~l~~~~----~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 99 (145)
T 3g3z_A 28 DLNYNLFAVLYTLATEG----SRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYA 99 (145)
T ss_dssp TCCHHHHHHHHHHHHHC----SBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCC----CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHH
Confidence 58999999999996653 278888889999999999999999999999998665543 356776666544
No 288
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=78.51 E-value=3.2 Score=34.92 Aligned_cols=68 Identities=15% Similarity=0.188 Sum_probs=52.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~a 82 (472)
.|++.+++||..+.. +. +....+++..+++...+...+..|.+.|+|.+...+ ...+.+|..|.....
T Consensus 35 ~lt~~~~~iL~~l~~----~~-~t~~eLa~~l~~s~~tvs~~l~~L~~~Glv~r~~~~~d~R~~~~~lT~~g~~~~~ 106 (146)
T 3tgn_A 35 ALTNTQEHILMLLSE----ES-LTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIAE 106 (146)
T ss_dssp CCCHHHHHHHHHHTT----CC-CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC----------CCEECGGGHHHHH
T ss_pred CCCHHHHHHHHHHHh----CC-CCHHHHHHHHCCCHHHHHHHHHHHHHCCCeEeccCCCCCceeEEEECHhHHHHHH
Confidence 579999999998853 34 888899999999999999999999999999876543 334667777766554
No 289
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=77.81 E-value=3.3 Score=34.69 Aligned_cols=70 Identities=14% Similarity=0.073 Sum_probs=54.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~a 82 (472)
.|++.+++||..+.. .+.-+....+++..+++...+...++.|.+.|+|.+...+ ...+.+|..|...+.
T Consensus 34 ~l~~~~~~iL~~l~~---~~~~~t~~~la~~l~~s~~~vs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 107 (146)
T 2fbh_A 34 GLSQARWLVLLHLAR---HRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIA 107 (146)
T ss_dssp CCTTTHHHHHHHHHH---CSSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHHH
T ss_pred CCCHHHHHHHHHHHH---cCCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCeeecCCCcccCeeeeEECHhHHHHHH
Confidence 589999999999932 2345677888888999999999999999999999876543 334667777766543
No 290
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=77.12 E-value=2.4 Score=34.17 Aligned_cols=58 Identities=21% Similarity=0.106 Sum_probs=49.5
Q ss_pred hhhhccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc
Q 012042 5 VDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 5 ~~~~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
+..+..|++.++.||..|+..- .+-+....|+...+++...+.++|++|.+.+||.+.
T Consensus 12 ~~k~~~Lt~~q~~Vl~~I~~~g--~~gi~qkeLa~~~~l~~~tvt~iLk~LE~kglIkr~ 69 (91)
T 2dk5_A 12 AGKMKGSDNQEKLVYQIIEDAG--NKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAV 69 (91)
T ss_dssp CCCCCCSCSSHHHHHHHHHHHC--TTCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HhhhcCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEe
Confidence 4567889999999999999753 234678889999999999999999999999999843
No 291
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=76.30 E-value=2.1 Score=36.07 Aligned_cols=69 Identities=19% Similarity=0.220 Sum_probs=53.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|++.+|+||..+... .-+....+++..+++...+...+..|.+.|+|.+...+-| .+.+|..|...+.
T Consensus 34 ~lt~~~~~iL~~l~~~----~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 106 (143)
T 3oop_A 34 DVTPEQWSVLEGIEAN----EPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKETT 106 (143)
T ss_dssp SSCHHHHHHHHHHHHH----SSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHHH
Confidence 4899999999999765 4467778888889999999999999999999987654433 4667766766543
No 292
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=74.70 E-value=2.6 Score=35.92 Aligned_cols=69 Identities=14% Similarity=0.079 Sum_probs=53.1
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|+..+|+||..+... .-+....++...+++...+...+..|.+.|||.+...+-| -+.+|..|...+.
T Consensus 38 ~lt~~q~~iL~~l~~~----~~~~~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 110 (149)
T 4hbl_A 38 GITYSQYLVMLTLWEE----NPQTLNSIGRHLDLSSNTLTPMLKRLEQSGWVKRERQQSDKRQLIITLTDNGQQQQE 110 (149)
T ss_dssp TCCHHHHHHHHHHHHS----SSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEC---------CEEEECSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeCCCCCCcceeeeeECHHHHHHHH
Confidence 5899999999999754 4467788888899999999999999999999998755433 4678877877653
No 293
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=74.49 E-value=7.4 Score=36.70 Aligned_cols=114 Identities=12% Similarity=-0.002 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHH-HCCceeccCCCCcEEEcCCCcEEEEeCCCceecCcccchhhhccccchhhhhcccccccccccccc
Q 012042 206 VFETIIGLVVRLA-EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTD 284 (472)
Q Consensus 206 i~~qIl~aL~~LH-~~GIIHrDLKP~NILl~~~g~vkIIDFG~A~~~~~p~a~~~l~rD~~~i~~~f~~~y~~~~~~~~~ 284 (472)
++.|.+..|..+- +..-..+=+.|..|++..+|.|.+.+ +.+.. + ... |. +|+. ..
T Consensus 54 Lc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~~---~------------~~~-~~-----~pe~-~~ 110 (229)
T 2yle_A 54 VCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADDA---G------------EPP-PV-----AGKL-GY 110 (229)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C---------------------------------CC-SS
T ss_pred HHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-ccccc---c------------ccC-CC-----Chhh-cc
Confidence 5556666665542 11112333467999999999987653 21100 0 000 11 1111 11
Q ss_pred CCCCcchheeccCchhhhhhhccCCcchhhhhccCCCHHHHHHHHHHHhcCcccCCCCCCCCC
Q 012042 285 GDDGSDIDTDEGSRLSFASISKTAGFLDKELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347 (472)
Q Consensus 285 ~~~~~~sDiySlG~~~f~~~t~~~~~l~~~~~~~~~s~~~~~~l~k~l~~~p~~R~s~~e~~~ 347 (472)
...+.+.=|||+|+++|..+.-.- +. .....+|..+..+|..|.....++ .+.+|+-+
T Consensus 111 ~~~te~~~IysLG~tLY~ALDygL---~e-~eE~eLS~~LE~LL~~Mt~~~~d~-~~~DeG~~ 168 (229)
T 2yle_A 111 SQCMETEVIESLGIIIYKALDYGL---KE-NEERELSPPLEQLIDHMANTVEAD-GSNDEGYE 168 (229)
T ss_dssp SSSCHHHHHHHHHHHHHHHHTTTC---CT-TEEECCCHHHHHHHHHHTTCCC-----------
T ss_pred ccchHHHHHHHHHHHHHHHhhcCC---Cc-ccchhhCHHHHHHHHHHHhccccc-cccccccc
Confidence 234677889999999999876321 11 234678999999999988774332 36666655
No 294
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=73.66 E-value=2 Score=34.10 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=51.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC---ccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK---YDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~---y~gy~lt~~g~d~~ 81 (472)
.+++.+++||..+... .-+....+++..+++...+...+..|.+.|+|.+...+ ..-+.+|..|...+
T Consensus 17 ~l~~~~~~il~~l~~~----~~~s~~ela~~l~is~~tv~~~l~~L~~~glv~~~~~~~~r~~~~~~t~~g~~~~ 87 (109)
T 1sfx_A 17 SFKPSDVRIYSLLLER----GGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKVL 87 (109)
T ss_dssp CCCHHHHHHHHHHHHH----CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEEEEEECCHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEeecCCceEEEEecCcHHHHH
Confidence 4789999999999653 23678888889999999999999999999999875432 11224565665544
No 295
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=73.45 E-value=4.5 Score=34.91 Aligned_cols=69 Identities=19% Similarity=0.239 Sum_probs=54.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~~a 82 (472)
.|+..+|+||..+... .-+....++...+++...+...+..|.+.|||.+...+-|+ +.+|..|...+.
T Consensus 43 glt~~q~~iL~~l~~~----~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 115 (162)
T 3k0l_A 43 EISLPQFTALSVLAAK----PNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLN 115 (162)
T ss_dssp TCCHHHHHHHHHHHHC----TTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHHH
Confidence 5899999999999764 34678888899999999999999999999999886655443 556666655443
No 296
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=72.94 E-value=2 Score=36.26 Aligned_cols=68 Identities=19% Similarity=0.115 Sum_probs=54.6
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|++.+++||..+..+-. ....++...+++...+...+..|.+.|+|.+...+-| -+.+|..|...+.
T Consensus 34 ~lt~~~~~iL~~l~~~~~-----~~~~la~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (144)
T 3f3x_A 34 NLSYLDFSILKATSEEPR-----SMVYLANRYFVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLL 105 (144)
T ss_dssp SCCHHHHHHHHHHHHSCE-----EHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCC-----CHHHHHHHHCCChhHHHHHHHHHHHCCCEEeccCCCCCceEEEEECHHHHHHHH
Confidence 689999999999976532 6777888889999999999999999999988765544 3677777766554
No 297
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=72.83 E-value=4.6 Score=34.21 Aligned_cols=62 Identities=6% Similarity=0.087 Sum_probs=49.6
Q ss_pred hhhc--cCChhhhHHHHHHHhh-CCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 6 DVLR--YLSKDDFRVLTAVEMG-MRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 6 ~~~~--~l~~~d~rvL~~ie~~-~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
+.|. .|+..+|.||..+... .....++....|+...+++...+...|+.|.+.|++.+....
T Consensus 23 ~~y~~lgLt~~e~~vll~L~~~~~~~~~~ps~~~LA~~l~~s~~~V~~~l~~Le~kGlI~~~~~~ 87 (128)
T 2vn2_A 23 GHYKQLGLGEGELVLLLHMQSFFEEGVLFPTPAELAERMTVSAAECMEMVRRLLQKGMIAIEEHT 87 (128)
T ss_dssp TTTTTTTCCHHHHHHHHHHHHHHTTTCSSCCHHHHHHTSSSCHHHHHHHHHHHHHTTSSEECC--
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEeEE
Confidence 3455 6899999999888765 334566788899999999999999999999999999876543
No 298
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=72.63 E-value=4 Score=33.79 Aligned_cols=68 Identities=13% Similarity=0.064 Sum_probs=52.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
.|++.+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+-+ .+.+|..|...+
T Consensus 30 ~l~~~~~~iL~~l~~~----~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~r~~~~~lT~~G~~~~ 101 (139)
T 3bja_A 30 DISYVQFGVIQVLAKS----GKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNPNDQRETLVYLTKKGEETK 101 (139)
T ss_dssp TCCHHHHHHHHHHHHS----CSEEHHHHHHHCSSCCTTHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCcCHHHHHHHHCCChhHHHHHHHHHHHCCCeeeccCCCCCceeEEEECHHHHHHH
Confidence 5899999999999653 3467778888899999999999999999999987543333 356676665544
No 299
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=72.48 E-value=4.1 Score=34.95 Aligned_cols=68 Identities=12% Similarity=0.174 Sum_probs=51.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~ 81 (472)
.|+..+++||..+.. +.-+....+++..+++...+...++.|.+.|||.+...+ ...+.+|..|..++
T Consensus 46 ~lt~~~~~iL~~l~~----~~~~t~~ela~~l~is~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 117 (162)
T 2fa5_A 46 GMAIPEWRVITILAL----YPGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGDDRRRSMLALSPAGRQVY 117 (162)
T ss_dssp CCCHHHHHHHHHHHH----STTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCCEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHh----CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeecCCCCCCeeEEEECHHHHHHH
Confidence 689999999999976 245677788888999999999999999999999875433 33466776665544
No 300
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=72.46 E-value=3.6 Score=34.33 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=56.3
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|++.+|.||..+... ...-+....++...+++...+...+++|.+.|+|.+...+-| .+.+|..|...+.
T Consensus 34 ~lt~~q~~vL~~l~~~--~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~i~LT~~G~~~~~ 108 (127)
T 2frh_A 34 SISFEEFAVLTYISEN--KEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIE 108 (127)
T ss_dssp CCCHHHHHHHHHHHHT--CCSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECCSHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc--cCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 5899999999999763 224567788889999999999999999999999998655433 4567877776554
No 301
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=71.78 E-value=4.1 Score=33.87 Aligned_cols=66 Identities=9% Similarity=0.028 Sum_probs=50.4
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----ccccccccc
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYD 79 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d 79 (472)
.|+..+++||..+...- -+....+++..+++...+...++.|.+.|+|.+...+-++ +.+|..|..
T Consensus 28 ~l~~~~~~iL~~l~~~~----~~~~~ela~~l~is~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~ 97 (142)
T 3bdd_A 28 GISLTRYSILQTLLKDA----PLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQARE 97 (142)
T ss_dssp SSCHHHHHHHHHHHHHC----SBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHhCC----CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHH
Confidence 68999999999997642 3677788888899999999999999999999876544333 445544433
No 302
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=70.45 E-value=4 Score=34.20 Aligned_cols=68 Identities=16% Similarity=0.072 Sum_probs=52.5
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~a 82 (472)
.|++.+++||..+. +.-+....+++..+++...+...+..|.+.|+|.+...+ ...+.+|..|...+.
T Consensus 34 ~l~~~~~~iL~~l~-----~~~~~~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~r~~~~~lT~~G~~~~~ 105 (146)
T 2gxg_A 34 NLSYLDFLVLRATS-----DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFN 105 (146)
T ss_dssp TCCHHHHHHHHHHT-----TSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHh-----cCCcCHHHHHHHhCCCchhHHHHHHHHHHCCCEEeecCCCCCceEEEEECHHHHHHHH
Confidence 48999999999886 344678888889999999999999999999999875433 233566766655443
No 303
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=70.22 E-value=3.3 Score=34.60 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=50.3
Q ss_pred CChhhhHHHHHHHhhCCCCCCCCHHHHHHHh--CCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHH
Q 012042 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIA--SLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 11 l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a--~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~a 82 (472)
|++.|.+||..+...- ..+...++... +++...+.+.|+.|.+.|||.....+ -|++|..|.+++.
T Consensus 11 md~~d~~IL~~L~~~g----~~s~~eLA~~l~~giS~~aVs~rL~~Le~~GLV~~~~rg--~Y~LT~~G~~~l~ 78 (111)
T 3b73_A 11 MTIWDDRILEIIHEEG----NGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLANG--VYVITEEGEAYLN 78 (111)
T ss_dssp CCHHHHHHHHHHHHHS----CBCHHHHHTSTTCCSCHHHHHHHHHHHHHTTSEEECSTT--CEEECHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcC----CCCHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEecCCc--eEEECchHHHHHH
Confidence 7899999999886521 34555666666 88888999999999999999875433 6888877755443
No 304
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=69.62 E-value=4.4 Score=34.41 Aligned_cols=68 Identities=16% Similarity=0.250 Sum_probs=51.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC--CC----ccCcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS--SK----YDGFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~--~~----y~gy~lt~~g~d~~a 82 (472)
.|++.+|+||..+ . +.-+....++...+++...+...+..|.+.|+|.+.. .+ ...+.+|..|...+.
T Consensus 35 ~lt~~q~~iL~~l-~----~~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~~~D~R~~~~~lT~~G~~~~~ 108 (151)
T 3kp7_A 35 GISAEQSHVLNML-S----IEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEKPDSNTDQRLKIIKLSNKGKKYIK 108 (151)
T ss_dssp TCCHHHHHHHHHH-H----HSCBCHHHHHHHHCSCSSHHHHHHHHHHHTTSEEC-----------CCBEECHHHHHHHH
T ss_pred CCCHHHHHHHHHH-H----cCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCCCeeEEEECHhHHHHHH
Confidence 5899999999999 3 2446788888899999999999999999999998732 33 334566766665443
No 305
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=69.30 E-value=6.3 Score=34.01 Aligned_cols=69 Identities=13% Similarity=0.135 Sum_probs=53.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~~ 81 (472)
.||...|.||..+... .+-+....++...+++...+...+.+|.+.|+|.+...+-|+ ..+|..|...+
T Consensus 28 gLt~~q~~vL~~L~~~---~~~~~~~eLa~~l~~~~~tvs~~v~~Le~~GlV~R~~~~~DrR~~~l~LT~~G~~~~ 100 (151)
T 4aik_A 28 ELTQTHWVTLYNINRL---PPEQSQIQLAKAIGIEQPSLVRTLDQLEEKGLITRHTSANDRRAKRIKLTEQSSPII 100 (151)
T ss_dssp CCCHHHHHHHHHHHHS---CTTSCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECGGGHHHH
T ss_pred CCCHHHHHHHHHHHHc---CCCCcHHHHHHHHCcCHHHHHHHHHHHHhCCCeEeecCCCCCcchhhhcCHHHHHHH
Confidence 5899999999998643 223445567888899999999999999999999987766554 55666666544
No 306
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=68.86 E-value=17 Score=39.26 Aligned_cols=75 Identities=16% Similarity=0.300 Sum_probs=47.8
Q ss_pred CCcceeeecCCceeEEeecCCCChhhhhccC---------------Ch-----H---HHHHHHH--HHHHHHHHCCceec
Q 012042 171 FPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQ---------------NP-----D---SVFETII--GLVVRLAEHGLIHC 225 (472)
Q Consensus 171 i~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~---------------~~-----~---~i~~qIl--~aL~~LH~~GIIHr 225 (472)
+..+.++..+..+=++|++++.++.+++... .+ . .+...++ ..+.|+ .|| |
T Consensus 402 i~~Y~Vipls~~~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YI--LGi--g 477 (614)
T 3ls8_A 402 LTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYI--LGV--G 477 (614)
T ss_dssp CCCCCEEESSSSEEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHH--HTC--C
T ss_pred eeccEEEEecCCCceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhhee--eec--c
Confidence 4556677777777778999887666543211 11 0 1222222 122333 344 6
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCce
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
|=+++||||+.+|++.=||||.+-
T Consensus 478 DRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 478 DRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCTTSEEECTTSCEEECCCSSCT
T ss_pred CCCCcceeEcCCCCEeeeehHHhh
Confidence 889999999999999999999874
No 307
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=68.48 E-value=3.3 Score=33.41 Aligned_cols=58 Identities=21% Similarity=0.262 Sum_probs=48.6
Q ss_pred hHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHH
Q 012042 16 FRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 16 ~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~a 82 (472)
+.||.++.. . +...-++..++++...+...+..|.+.|||..... +|.+|..|..++.
T Consensus 11 ~~IL~~i~~----~--~~~t~La~~~~ls~~~~~~~l~~L~~~GLI~~~~~---~~~LT~kG~~~l~ 68 (95)
T 1r7j_A 11 QAILEACKS----G--SPKTRIMYGANLSYALTGRYIKMLMDLEIIRQEGK---QYMLTKKGEELLE 68 (95)
T ss_dssp HHHHHHHTT----C--BCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETT---EEEECHHHHHHHH
T ss_pred HHHHHHHHc----C--CCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEECC---eeEEChhHHHHHH
Confidence 567777752 2 78889999999999999999999999999988754 6999999987654
No 308
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=68.45 E-value=5.8 Score=34.60 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=52.3
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|+..+|+||..+... .+-+....++...+++...+...+.+|.+.|||.+...+-| -+.+|-.|...+.
T Consensus 50 glt~~q~~vL~~L~~~---~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 123 (166)
T 3deu_A 50 ELTQTHWVTLHNIHQL---PPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIA 123 (166)
T ss_dssp TCCHHHHHHHHHHHHS---CSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHH
T ss_pred CCCHHHHHHHHHHHHc---CCCCCHHHHHHHHCCCHhhHHHHHHHHHHCCCEEeeCCCCCCCeeEEEECHHHHHHHH
Confidence 5899999999999762 23367778888899999999999999999999988765543 3567766666543
No 309
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=68.34 E-value=4.6 Score=33.54 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=53.6
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|+..+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+-+ -+.+|..|...+.
T Consensus 31 ~lt~~~~~iL~~l~~~----~~~~~~~la~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 103 (138)
T 1jgs_A 31 DITAAQFKVLCSIRCA----ACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICE 103 (138)
T ss_dssp TSCHHHHHHHHHHHHH----SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc----CCCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHHH
Confidence 4899999999999753 2356777888899999999999999999999987544433 3667777766553
No 310
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=68.16 E-value=3.4 Score=36.07 Aligned_cols=68 Identities=15% Similarity=0.164 Sum_probs=52.6
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
.|+..+++||.++... .-+....+++..+++...+...++.|.+.|+|.+...+-+ .+.+|..|...+
T Consensus 42 ~lt~~~~~iL~~L~~~----~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~ 113 (168)
T 2nyx_A 42 NITIPQFRTLVILSNH----GPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVV 113 (168)
T ss_dssp SCCHHHHHHHHHHHHH----CSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHH
Confidence 6999999999999763 2467888888999999999999999999999987544433 355665554433
No 311
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=67.82 E-value=4.3 Score=33.69 Aligned_cols=68 Identities=16% Similarity=0.185 Sum_probs=52.9
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
.|+..+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+-+ .+.+|..|...+
T Consensus 35 ~l~~~~~~iL~~l~~~----~~~t~~ela~~l~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 106 (140)
T 2nnn_A 35 GLTPTQWAALVRLGET----GPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAEL 106 (140)
T ss_dssp CCCHHHHHHHHHHHHH----SSBCHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCeeeeEECHhHHHHH
Confidence 7899999999999654 2467778888899999999999999999999987543333 366676665543
No 312
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=67.75 E-value=3.4 Score=34.32 Aligned_cols=66 Identities=11% Similarity=0.161 Sum_probs=51.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----Cccccccccc
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYD 79 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d 79 (472)
.|++.+++||..+..+ .-+....+++..+++...+...++.|.+.|+|.+...+-+ .+.+|..|..
T Consensus 26 ~l~~~~~~iL~~l~~~----~~~~~~ela~~l~~s~~tvs~~l~~L~~~glv~~~~~~~d~R~~~~~lT~~G~~ 95 (138)
T 3bpv_A 26 NLTDAQVACLLRIHRE----PGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEE 95 (138)
T ss_dssp TCCHHHHHHHHHHHHS----TTCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCceeEEeeECHhHHH
Confidence 5899999999999763 4467778888889999999999999999999987544433 2555655544
No 313
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=67.10 E-value=4.3 Score=30.41 Aligned_cols=53 Identities=11% Similarity=0.002 Sum_probs=42.3
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS 65 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~ 65 (472)
.|+..+.+||..+... ...+....|++..+++...+.+.|+.|.+.|+|....
T Consensus 7 ~m~~~~~~IL~~L~~~---~~~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~~~~ 59 (67)
T 2heo_A 7 TGDNLEQKILQVLSDD---GGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPS 59 (67)
T ss_dssp --CHHHHHHHHHHHHH---CSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred cccHHHHHHHHHHHHc---CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEecCC
Confidence 4666677899988752 3458889999999999999999999999999976533
No 314
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=67.02 E-value=4.5 Score=34.09 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=52.5
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~ 81 (472)
.|++.+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+ ...+.+|..|-..+
T Consensus 39 ~l~~~~~~iL~~l~~~----~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 110 (150)
T 2rdp_A 39 PITPPQFVALQWLLEE----GDLTVGELSNKMYLACSTTTDLVDRMERNGLVARVRDEHDRRVVRIRLLEKGERII 110 (150)
T ss_dssp SSCHHHHHHHHHHHHH----CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC---CEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCcceeEeEECHhHHHHH
Confidence 5899999999999764 34677788888899999999999999999999875433 23356666665544
No 315
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=66.93 E-value=7 Score=32.98 Aligned_cols=71 Identities=7% Similarity=0.047 Sum_probs=48.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|+..+|+||..+.... ..-+....+++..+++...+...+..|.+.|+|.+...+-| -+.+|..|...+.
T Consensus 38 glt~~q~~vL~~l~~~~--~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 112 (148)
T 3jw4_A 38 GLNSQQGRMIGYIYENQ--ESGIIQKDLAQFFGRRGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALVE 112 (148)
T ss_dssp TCCHHHHHHHHHHHHHT--TTCCCHHHHHHC------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCC--CCCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEeeCCCCCchhheeeECHHHHHHHH
Confidence 58999999999998752 24467788888899999999999999999999998755433 4567766765543
No 316
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=66.87 E-value=7.3 Score=32.59 Aligned_cols=61 Identities=10% Similarity=0.102 Sum_probs=44.7
Q ss_pred hHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 16 FRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 16 ~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
+++|..+.... ....++...|++..+++...+.+.+..|.+.|+|........||.+....
T Consensus 12 l~iL~~la~~~-~~~~~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~~~g~~ggy~L~~~~ 72 (129)
T 2y75_A 12 LTIMIELAKKH-GEGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGSEP 72 (129)
T ss_dssp HHHHHHHHHTT-TSCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEC----CCEEESSCG
T ss_pred HHHHHHHHhCC-CCCcCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEecCCCCCceEeCCCH
Confidence 44555554332 34678999999999999999999999999999998766556788887544
No 317
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=66.72 E-value=6.9 Score=32.89 Aligned_cols=69 Identities=13% Similarity=0.248 Sum_probs=52.1
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~a 82 (472)
.|+..+++||..+... .-+....+++..+++...+...+..|.+.|+|.+...+ ...+.+|..|-..+.
T Consensus 37 ~l~~~~~~iL~~l~~~----~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~~ 109 (148)
T 3nrv_A 37 GIGMTEWRIISVLSSA----SDCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELYE 109 (148)
T ss_dssp TCCHHHHHHHHHHHHS----SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcC----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHHH
Confidence 6999999999999753 35677778888999999999999999999999887544 334667766665443
No 318
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=66.56 E-value=6.6 Score=33.36 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=52.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~ 81 (472)
.|+..+++||..+.. +.-+....+++..+++...+...+..|.+.|+|.+...+ ...+.+|..|-..+
T Consensus 40 ~lt~~~~~iL~~l~~----~~~~t~~ela~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 111 (155)
T 3cdh_A 40 GLRVPEWRVLACLVD----NDAMMITRLAKLSLMEQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALA 111 (155)
T ss_dssp TCCHHHHHHHHHHSS----CSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHH----CCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHH
Confidence 589999999998853 345778888899999999999999999999999876433 33466776665544
No 319
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=65.17 E-value=5.3 Score=34.11 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=51.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
.|+..+++||..+... +.-+....+++..+++...+...++.|.+.|+|.+...+-+ .+.+|..|...+
T Consensus 44 ~l~~~~~~iL~~L~~~---~~~~~~~ela~~l~i~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 116 (160)
T 3boq_A 44 GLSLAKFDAMAQLARN---PDGLSMGKLSGALKVTNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTF 116 (160)
T ss_dssp SCCHHHHHHHHHHHHC---TTCEEHHHHHHHCSSCCSCHHHHHHHHHHHTSEEEC--------CEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc---CCCCCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCCCeEEEEEChhHHHHH
Confidence 6899999999999422 23467888888999999999999999999999987654433 355666665544
No 320
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=64.63 E-value=6 Score=33.51 Aligned_cols=67 Identities=10% Similarity=0.136 Sum_probs=51.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccc--cCCCcc----CcccccccccH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHH--DSSKYD----GFRLTYLGYDF 80 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~--~~~~y~----gy~lt~~g~d~ 80 (472)
.|++.+++||..+... .-+....+++..+++...+...+..|.+.|+|.+ ...+-+ .+.+|..|..+
T Consensus 38 ~lt~~~~~iL~~l~~~----~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~~~d~R~~~~~LT~~G~~~ 110 (154)
T 2qww_A 38 GLTIQQLAMINVIYST----PGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDL 110 (154)
T ss_dssp TCCHHHHHHHHHHHHS----TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEESCC--CTTCTTCEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCcCCCCCCceeEeEECHHHHHH
Confidence 5899999999999764 3367778888889999999999999999999988 443333 35566555443
No 321
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=64.59 E-value=4.2 Score=33.85 Aligned_cols=67 Identities=19% Similarity=0.129 Sum_probs=50.8
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDF 80 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~ 80 (472)
.|++.+++||..+...- -+....+++..+++...+...++.|.+.|+|.+...+-+ .+.+|..|-.+
T Consensus 33 ~lt~~~~~iL~~l~~~~----~~t~~ela~~l~~s~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~ 103 (142)
T 2fbi_A 33 GLTEQQWRVIRILRQQG----EMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQC 103 (142)
T ss_dssp TCCHHHHHHHHHHHHHC----SEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHcC----CCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCCCCCeeEEEECHHHHHH
Confidence 58999999999997642 367778888899999999999999999999987544333 24455444443
No 322
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=64.41 E-value=5.8 Score=33.12 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=53.4
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCc----cCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKY----DGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y----~gy~lt~~g~d~~ 81 (472)
.|+..+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+- ..+.+|..|-..+
T Consensus 26 ~lt~~~~~iL~~l~~~----~~~t~~~la~~l~~s~~~vs~~l~~Le~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 97 (144)
T 1lj9_A 26 SLTRGQYLYLVRVCEN----PGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVY 97 (144)
T ss_dssp TCTTTHHHHHHHHHHS----TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC----cCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCCCCceeeeEEChhHHHHH
Confidence 5899999999999764 346777888888999999999999999999998765443 3366776666544
No 323
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=64.24 E-value=4.4 Score=34.05 Aligned_cols=69 Identities=17% Similarity=0.134 Sum_probs=50.4
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
.|+..+++||..+... +.-+....+++..+++...+...++.|.+.|+|.+...+-+ .+.+|..|...+
T Consensus 32 ~l~~~~~~iL~~l~~~---~~~~~~~~la~~l~i~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 104 (147)
T 2hr3_A 32 PVQFSQLVVLGAIDRL---GGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNL 104 (147)
T ss_dssp HHHHHHHHHHHHHHHT---TSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc---CCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHH
Confidence 3678889999998762 33478888889999999999999999999999987654333 355665554433
No 324
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=64.18 E-value=5.6 Score=34.28 Aligned_cols=68 Identities=18% Similarity=0.184 Sum_probs=52.3
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~~ 81 (472)
.|+..+|+||..+... .-+....++...+++...+...+.+|.+.|+|.+...+-|+ +.+|..|...+
T Consensus 50 glt~~q~~vL~~l~~~----~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 121 (161)
T 3e6m_A 50 KLPTPKLRLLSSLSAY----GELTVGQLATLGVMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKL 121 (161)
T ss_dssp TCCHHHHHHHHHHHHH----SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHH
Confidence 5899999999999764 24677788889999999999999999999999987655443 55666665544
No 325
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=63.66 E-value=5.2 Score=34.34 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=53.1
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~a 82 (472)
.|+..++.||..+... .-+....+++..+++...+...++.|.+.|+|.+...+-| .+.+|..|...+.
T Consensus 47 ~lt~~q~~vL~~l~~~----~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 119 (159)
T 3s2w_A 47 GIGSGQFPFLMRLYRE----DGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEP 119 (159)
T ss_dssp TCCTTTHHHHHHHHHS----CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC---CCEEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCCeeEEEECHHHHHHHH
Confidence 5899999999999663 4467778888899999999999999999999987654433 3556666655443
No 326
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=63.54 E-value=4.6 Score=33.77 Aligned_cols=67 Identities=10% Similarity=0.062 Sum_probs=51.4
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDF 80 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~ 80 (472)
.|++.+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+ ...+.+|..|-..
T Consensus 30 ~l~~~~~~iL~~l~~~----~~~~~~~la~~l~~s~~tvs~~l~~L~~~glv~r~~~~~d~r~~~~~lT~~G~~~ 100 (145)
T 2a61_A 30 GITPAQFDILQKIYFE----GPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEV 100 (145)
T ss_dssp TCCHHHHHHHHHHHHH----CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCCceEEEEECHHHHHH
Confidence 5899999999999763 34678888888999999999999999999999875433 2235556555443
No 327
>4b8x_A SCO5413, possible MARR-transcriptional regulator; winged helix motif; HET: CME; 1.25A {Streptomyces coelicolor}
Probab=62.00 E-value=4.2 Score=34.88 Aligned_cols=70 Identities=14% Similarity=0.206 Sum_probs=53.1
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~~ 81 (472)
.|+...|+||..+... .+.-++...++...+++...+...+++|.+.|||.+...+-|+ ..+|-.|...+
T Consensus 32 gLt~~q~~vL~~L~~~--~~~~~t~~eLa~~l~~~~~tvs~~v~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 105 (147)
T 4b8x_A 32 GLTFARYEALVLLTFS--KSGELPMSKIGERLMVHPTSVTNTVDRLVRSGLVAKRPNPNDGRGTLATITDKGREVV 105 (147)
T ss_dssp TCCHHHHHHHHHHHTS--GGGEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC----CEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC--CCCCcCHHHHHHHHCCCHHHHHHHHHHHHhCCCEEEeecCCcCceeEEEECHHHHHHH
Confidence 5899999999888543 3344677788999999999999999999999999987766554 45666665543
No 328
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=61.26 E-value=11 Score=32.16 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=44.2
Q ss_pred CChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 11 l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
|++.+++||..+.... -++...+++..+++...+...++.|.+.|++.+....
T Consensus 1 ld~~~~~il~~L~~~~----~~~~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~~~ 53 (150)
T 2pn6_A 1 MDEIDLRILKILQYNA----KYSLDEIAREIRIPKATLSYRIKKLEKDGVIKGYYAY 53 (150)
T ss_dssp CCHHHHHHHHHHTTCT----TSCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCCCCCC
T ss_pred CChHHHHHHHHHHHcC----CCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEEEee
Confidence 5778999999886542 4789999999999999999999999999999865433
No 329
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=61.02 E-value=3.9 Score=34.57 Aligned_cols=70 Identities=13% Similarity=0.110 Sum_probs=52.8
Q ss_pred CChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHH
Q 012042 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 11 l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~a 82 (472)
+++...++|.+|-.....+.-+....+++..+++...+...++.|.+.|+|.+.. ..++.+|..|.....
T Consensus 2 ls~~~~~~L~~i~~l~~~~~~~~~~ela~~l~vs~~tvs~~l~~Le~~Glv~r~~--~~~~~LT~~g~~~~~ 71 (142)
T 1on2_A 2 TTPSMEMYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEK--YRGLVLTSKGKKIGK 71 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEET--TTEEEECHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhhcCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEee--CceEEEchhHHHHHH
Confidence 4566667777665543334457888899999999999999999999999998753 256888877766543
No 330
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=60.12 E-value=12 Score=32.96 Aligned_cols=61 Identities=15% Similarity=0.110 Sum_probs=49.7
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
-.|+|..+... ..+.|+...|++..+++...+.+++..|.+.|+|......-.||+|.-..
T Consensus 14 Alr~l~~La~~--~~~~~s~~~IA~~~~is~~~l~kil~~L~~aGlv~s~rG~~GGy~Lar~p 74 (162)
T 3k69_A 14 AVHSILYLDAH--RDSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVGKNGGYQLDLAL 74 (162)
T ss_dssp HHHHHHHHHTT--TTSCBCHHHHHHHHTSCGGGTHHHHHHHHHTTSSEEECSTTCEEECCSCG
T ss_pred HHHHHHHHHhC--CCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeecCCCCCeEecCCh
Confidence 34556555543 35789999999999999999999999999999998877778889887544
No 331
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=60.06 E-value=11 Score=33.30 Aligned_cols=62 Identities=6% Similarity=-0.006 Sum_probs=49.3
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
-.|+|..+... .....|+...|++..+++...+.+++..|.+.|+|......-.||.+.-..
T Consensus 29 Alr~L~~LA~~-~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~aGlv~s~rG~~GGy~Lar~p 90 (159)
T 3lwf_A 29 GLTITLELAKR-IGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDP 90 (159)
T ss_dssp HHHHHHHHHHT-TTSCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECSTTCEEEECSCT
T ss_pred HHHHHHHHHhc-CCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCeEEEecCCCCceEecCCH
Confidence 34555555543 234578999999999999999999999999999999888888899887544
No 332
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=59.83 E-value=9.5 Score=32.89 Aligned_cols=62 Identities=8% Similarity=0.085 Sum_probs=48.7
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
-.|+|..+.... ....++...|++..+++...+.+++..|.+.|+|......-.||++.-..
T Consensus 13 Al~~L~~La~~~-~~~~~s~~~IA~~~~i~~~~l~kil~~L~~aGlv~s~rG~~GGy~Lar~p 74 (143)
T 3t8r_A 13 GLTLMISLAKKE-GQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPA 74 (143)
T ss_dssp HHHHHHHHHTTT-TSCCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECSSSSSEEEESSCG
T ss_pred HHHHHHHHHhCC-CCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCEEEecCCCCCCeeecCCc
Confidence 345555555432 23478999999999999999999999999999998877777899887443
No 333
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=59.54 E-value=5.6 Score=33.71 Aligned_cols=69 Identities=13% Similarity=0.092 Sum_probs=52.2
Q ss_pred ccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 9 RYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 9 ~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
..|+..+++||..|... .-+....+++..+++...+...+..|.+.|+|.+...+-+ .+.+|..|-.++
T Consensus 33 ~~l~~~~~~iL~~l~~~----~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 105 (155)
T 1s3j_A 33 QGVTPAQLFVLASLKKH----GSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKF 105 (155)
T ss_dssp TTCCHHHHHHHHHHHHH----SEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHc----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCCCCceEEEEECHHHHHHH
Confidence 36899999999999763 2356778888889999999999999999999987644433 355665554433
No 334
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=59.10 E-value=7.8 Score=33.18 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=51.9
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~ 81 (472)
.|+..++.||..+... .-+....+++..+++...+...++.|.+.|+|.+...+ ...+.+|..|...+
T Consensus 49 ~lt~~~~~iL~~l~~~----~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 120 (162)
T 3cjn_A 49 GLSTAKMRALAILSAK----DGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVY 120 (162)
T ss_dssp TCCHHHHHHHHHHHHS----CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC--CCSSEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 4899999999999753 34677788888999999999999999999999875433 33456665555443
No 335
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=58.71 E-value=5.3 Score=31.62 Aligned_cols=69 Identities=14% Similarity=0.040 Sum_probs=51.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHH----HHHhCCCCchhHHHHHHHHhcccccccC-CCccCcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELV----HRIASLKHGGTYKVLKNLLRYKLLHHDS-SKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i----~~~a~l~~~~~~~~l~~L~k~~lv~~~~-~~y~gy~lt~~g~d~~a 82 (472)
.|++.+++||.++.. +.-+....+ ++..+++...+...++.|.+.|++.+.. .....+.+|..|...+.
T Consensus 5 ~lt~~q~~iL~~l~~----~~~~~~~el~~~la~~l~is~~tvs~~l~~Le~~gli~r~~~~r~~~~~LT~~G~~~~~ 78 (99)
T 1tbx_A 5 PFFYPEAIVLAYLYD----NEGIATYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQERGEKRLYLTEKGKLFAI 78 (99)
T ss_dssp SSBCHHHHHHHHHTT----CTTCBHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH----cCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCEEEEecCCceEEEECHHHHHHHH
Confidence 478899999999854 233444444 6667888889999999999999998643 23446778877876554
No 336
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=58.10 E-value=11 Score=33.46 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=49.3
Q ss_pred hhccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc
Q 012042 7 VLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD 69 (472)
Q Consensus 7 ~~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~ 69 (472)
.+..|+..+|.||.++.... +.-++...++...+++...+...+..|.+.|||.+...+-|
T Consensus 35 ~~~~lt~~q~~vL~~L~~~~--~~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~D 95 (189)
T 3nqo_A 35 YFGILTSRQYMTILSILHLP--EEETTLNNIARKMGTSKQNINRLVANLEKNGYVDVIPSPHD 95 (189)
T ss_dssp HHCSSCHHHHHHHHHHHHSC--GGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSC
T ss_pred HHccCCHHHHHHHHHHHhcc--CCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCC
Confidence 34469999999999997642 34567888888999999999999999999999987655443
No 337
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=58.06 E-value=9.9 Score=32.88 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=46.8
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
-.|+|..+... ....++...|++..+++...+.+.+..|.+.|||..... ..||.+.-..
T Consensus 16 Al~~L~~La~~--~~~~~~~~~iA~~~~i~~~~l~kil~~L~~~Glv~s~rG-~GGy~L~~~p 75 (149)
T 1ylf_A 16 AVHILSILKNN--PSSLCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRG-PGGAGLLKDL 75 (149)
T ss_dssp HHHHHHHHHHS--CGGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC----CCEEESSCG
T ss_pred HHHHHHHHHhC--CCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEccC-CCceEeCCCh
Confidence 45666666653 346899999999999999999999999999999987666 7889887544
No 338
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=57.79 E-value=10 Score=31.45 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=46.6
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD 69 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~ 69 (472)
.|+..+|+||..+.... .+-+....+++..+++...+...+++|.+.|+|.+...+-|
T Consensus 28 ~lt~~~~~vL~~l~~~~--~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~D 85 (139)
T 3eco_A 28 DITNEQGHTLGYLYAHQ--QDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQD 85 (139)
T ss_dssp TCCHHHHHHHHHHHHST--TTCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC-
T ss_pred CCCHHHHHHHHHHHhcC--CCCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCCCC
Confidence 58999999999997642 23567778888899999999999999999999987655443
No 339
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=57.66 E-value=11 Score=31.38 Aligned_cols=56 Identities=14% Similarity=0.201 Sum_probs=46.0
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS 65 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~ 65 (472)
.-.|++.+++||.++..... .++....|+...+++...++..|..|.+.|+|.+..
T Consensus 21 ~~gLt~~e~~il~~L~~~~~--~~~t~~eLa~~l~~s~sTV~r~L~~L~~~GlV~r~~ 76 (123)
T 3r0a_A 21 ALNLTKADLNVMKSFLNEPD--RWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQ 76 (123)
T ss_dssp HHTCCHHHHHHHHHHHHSTT--CCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HcCCCHHHHHHHHHHHHCCC--CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeeC
Confidence 34699999999999876422 236788888889999999999999999999998754
No 340
>2yu3_A DNA-directed RNA polymerase III 39 kDa polypeptide F variant; winged helix domain, RNA polymerase III C39 subunit, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.95 E-value=11 Score=30.67 Aligned_cols=59 Identities=20% Similarity=0.099 Sum_probs=49.4
Q ss_pred hhhhccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC
Q 012042 5 VDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS 65 (472)
Q Consensus 5 ~~~~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~ 65 (472)
+..+..|+.+++.|+..|+..-. +-|....|....+|....+.++|+.|...+||.+-.
T Consensus 29 a~k~~~Lt~~E~lVy~~I~~aGn--~GIw~kdL~~~tnL~~~~vtkiLK~LE~k~lIK~Vk 87 (95)
T 2yu3_A 29 AGKMKGSDNQEKLVYQIIEDAGN--KGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVK 87 (95)
T ss_dssp CCCCCSCSHHHHHHHHHHHHHTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEC
T ss_pred HhhhcCCCHHHHHHHHHHHHhCC--CCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCEEEec
Confidence 45578899999999999998743 345577889999999999999999999999987644
No 341
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=56.90 E-value=6.4 Score=32.98 Aligned_cols=54 Identities=15% Similarity=0.143 Sum_probs=45.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
.|+..+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+
T Consensus 37 ~l~~~~~~iL~~l~~~----~~~~~~~la~~l~~~~~tvs~~l~~L~~~glv~r~~~~ 90 (147)
T 1z91_A 37 NITYPQYLALLLLWEH----ETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSE 90 (147)
T ss_dssp CCCHHHHHHHHHHHHH----SEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCS
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHHCCCcCcHHHHHHHHHHCCCEEeccCC
Confidence 4899999999999764 24567778888899999999999999999999876544
No 342
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=56.30 E-value=17 Score=31.67 Aligned_cols=53 Identities=6% Similarity=0.138 Sum_probs=44.7
Q ss_pred CChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 11 l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
|++.|.+||.++.... .+|...+++..+++...+...+++|.+.|++.+....
T Consensus 1 lD~~d~~il~~L~~~~----~~s~~~la~~lg~s~~tv~~rl~~L~~~g~i~~~~a~ 53 (162)
T 3i4p_A 1 MDRLDRKILRILQEDS----TLAVADLAKKVGLSTTPCWRRIQKMEEDGVIRRRVAL 53 (162)
T ss_dssp CCHHHHHHHHHHTTCS----CSCHHHHHHHHTCCHHHHHHHHHHHHHTTSSCCCCCC
T ss_pred CCHHHHHHHHHHHHCC----CCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeeceee
Confidence 5778999999887643 3599999999999999999999999999998765443
No 343
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=56.13 E-value=11 Score=32.10 Aligned_cols=68 Identities=12% Similarity=0.064 Sum_probs=52.5
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~ 81 (472)
.|+..+++||..+...- -+....+++..+++...+...++.|.+.|+|.+...+ ...+.+|..|..++
T Consensus 41 ~lt~~~~~iL~~l~~~~----~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 112 (154)
T 2eth_A 41 DMKTTELYAFLYVALFG----PKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIF 112 (154)
T ss_dssp HSBHHHHHHHHHHHHHC----CBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcC----CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCcceeEEEECHHHHHHH
Confidence 48899999999997642 3677788888999999999999999999999875433 33456666665544
No 344
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=55.58 E-value=12 Score=35.47 Aligned_cols=68 Identities=12% Similarity=0.200 Sum_probs=54.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~a 82 (472)
.|++.+++||.++... .-+....+++..+++...+...++.|.+.|++.+.. ....|.+|..|.....
T Consensus 149 ~L~~~~~~IL~~L~~~----~~~s~~eLA~~lglsksTv~r~L~~Le~~GlV~r~~-r~~~~~LT~~G~~l~~ 216 (244)
T 2wte_A 149 DYSREEMKLLNVLYET----KGTGITELAKMLDKSEKTLINKIAELKKFGILTQKG-KDRKVELNELGLNVIK 216 (244)
T ss_dssp CCCHHHHHHHHHHHHH----TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-TTTEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeC-CccEEEECHHHHHHHH
Confidence 7899999999998643 236788899999999999999999999999998762 2346888877766543
No 345
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix; 2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Probab=54.69 E-value=13 Score=32.53 Aligned_cols=71 Identities=17% Similarity=0.182 Sum_probs=53.8
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCc----cCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKY----DGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y----~gy~lt~~g~d~~ 81 (472)
.|+..+|+||..+...-. +.-+....+++..+++...+...+.+|.+.|+|.+...+- ..+.+|..|...+
T Consensus 66 glt~~~~~iL~~L~~~~~-~~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~ 140 (181)
T 2fbk_A 66 GLNAAGWDLLLTLYRSAP-PEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALV 140 (181)
T ss_dssp TCCHHHHHHHHHHHHHCC-SSCBCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCC-CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 589999999999986532 2346778888889999999999999999999998865443 3466776665544
No 346
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=54.01 E-value=8.5 Score=32.21 Aligned_cols=66 Identities=23% Similarity=0.212 Sum_probs=48.6
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----ccccccccc
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYD 79 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d 79 (472)
.|++.+|+||..+.. +.-+....+++..+++...+...+..|.+.|+|.+...+-|+ +.+|..|..
T Consensus 33 glt~~q~~vL~~l~~----~~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~ 102 (140)
T 3hsr_A 33 DLTYTGYIVLMAIEN----DEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKA 102 (140)
T ss_dssp TCCHHHHHHHHHSCT----TCEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHH----cCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCeEecCCCCCcceeeeeEChHHHH
Confidence 589999999998853 455677888888999999999999999999999876654433 344544443
No 347
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=53.40 E-value=26 Score=29.95 Aligned_cols=54 Identities=11% Similarity=0.171 Sum_probs=46.1
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
.|++.|++||.++... .-++...+++..+++...+...++.|.+.|++.+....
T Consensus 4 ~ld~~~~~il~~L~~~----~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~~~ 57 (151)
T 2cyy_A 4 PLDEIDKKIIKILQND----GKAPLREISKITGLAESTIHERIRKLRESGVIKKFTAI 57 (151)
T ss_dssp CCCHHHHHHHHHHHHC----TTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSCCCCCC
T ss_pred CcCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEEE
Confidence 4889999999998765 34789999999999999999999999999999765443
No 348
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=52.91 E-value=13 Score=34.08 Aligned_cols=65 Identities=23% Similarity=0.377 Sum_probs=53.3
Q ss_pred hhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHH
Q 012042 13 KDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFL 81 (472)
Q Consensus 13 ~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~ 81 (472)
.+|+ |.+|-........+....+++..+++...+...+++|.+.|||.+.. +.++.+|-.|....
T Consensus 4 ~edY--L~~I~~l~~~~~~~~~~~lA~~l~vs~~tvs~~l~~Le~~GlV~r~~--~~~i~LT~~G~~~~ 68 (214)
T 3hrs_A 4 KEDY--LKCLYELGTRHNKITNKEIAQLMQVSPPAVTEMMKKLLAEELLIKDK--KAGYLLTDLGLKLV 68 (214)
T ss_dssp HHHH--HHHHHHTTSSCSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET--TTEEEECHHHHHHH
T ss_pred HHHH--HHHHHHHHhcCCCcCHHHHHHHHCCChhHHHHHHHHHHHCCCEEEec--CCCeEECHHHHHHH
Confidence 4555 78887777778889999999999999999999999999999998764 35677887776644
No 349
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=51.69 E-value=20 Score=29.52 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=45.6
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
.|+..+++||..+.... ..-+....+++..+++...+...++.|.+.|+|.+...+
T Consensus 31 ~lt~~~~~iL~~l~~~~--~~~~~~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~ 86 (141)
T 3bro_A 31 DLTGTQMTIIDYLSRNK--NKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSG 86 (141)
T ss_dssp TCCHHHHHHHHHHHHTT--TSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECS
T ss_pred CCCHHHHHHHHHHHHCC--CCCcCHHHHHHHHCCCcchHHHHHHHHHHCCCEEeeCCC
Confidence 58999999999997652 224677888888899999999999999999998765433
No 350
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=51.54 E-value=29 Score=28.95 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=42.6
Q ss_pred CChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC
Q 012042 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS 65 (472)
Q Consensus 11 l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~ 65 (472)
|++.|++||..+..+ .-++...+++..+++...+...++.|.+.|++.+..
T Consensus 2 ld~~~~~il~~L~~~----~~~~~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 52 (141)
T 1i1g_A 2 IDERDKIILEILEKD----ARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYT 52 (141)
T ss_dssp CCSHHHHHHHHHHHC----TTCCHHHHHHHHTSCHHHHHHHHHHHHHHTSSCCCC
T ss_pred CCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEeccc
Confidence 678899999988754 235788888888999999999999999999997654
No 351
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=50.74 E-value=7.8 Score=42.48 Aligned_cols=75 Identities=15% Similarity=0.218 Sum_probs=47.4
Q ss_pred CCcceeeecCCceeEEeecCCCChhhhhccC------------Ch-----------HHHHHHHH--HHHHHHHHCCceec
Q 012042 171 FPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQ------------NP-----------DSVFETII--GLVVRLAEHGLIHC 225 (472)
Q Consensus 171 i~vP~~i~~~~~~LVMEyi~G~~L~~l~~~~------------~~-----------~~i~~qIl--~aL~~LH~~GIIHr 225 (472)
+..+.++..+..+=++|++++.+|.++.... .+ ..+...++ ..+.|+ .|| |
T Consensus 476 i~~Y~Vipls~~~GLIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YI--LGl--G 551 (696)
T 2x6h_A 476 LTPYKVLATSSKHGFLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYL--LGV--G 551 (696)
T ss_dssp CCCCCEEESSTTCEEEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHH--HTC--C
T ss_pred EeccEEEeccCCCCeeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHH--ccC--C
Confidence 4456677776666677999877766654211 00 11222222 122232 233 7
Q ss_pred cCCCCcEEEcCCCcEEEEeCCCce
Q 012042 226 DFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 226 DLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
|=+|+||||+.+|.+.=||||.+-
T Consensus 552 DRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 552 DRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCcceEEeCCCCEEEEeehhhh
Confidence 999999999999999999999874
No 352
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=50.55 E-value=17 Score=30.95 Aligned_cols=50 Identities=10% Similarity=0.196 Sum_probs=43.5
Q ss_pred CChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc
Q 012042 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 11 l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
|++.|++||..+... ..++...+++..+++...+...+++|.+.|++.+.
T Consensus 3 ld~~d~~il~~L~~~----~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~ 52 (144)
T 2cfx_A 3 LDQIDLNIIEELKKD----SRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQY 52 (144)
T ss_dssp CCHHHHHHHHHHHHC----SCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEE
Confidence 688899999999765 34789999999999999999999999999988753
No 353
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=50.55 E-value=9.2 Score=34.56 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=50.6
Q ss_pred cCChhhhHHHHHHHhhCCCCCC-CCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccc
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEI-VPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLT 74 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~-Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt 74 (472)
.||+....||.+|......+.+ .....+++..+++...+...|+.|.+.|++.+......++.++
T Consensus 2 ~lt~~q~~il~~I~~~~~~~g~~~s~~eia~~lgl~~~tv~~~l~~Le~~G~i~~~~~~~r~i~~~ 67 (196)
T 3k2z_A 2 DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITPRGALLHLIALEKKGYIERKNGKPRALRIS 67 (196)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECC---TTCCEES
T ss_pred CcCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCCcHHHHHHHHHHHHCCCEEecCCCcceEEec
Confidence 4899999999999887666665 3445788888999889999999999999998876655565544
No 354
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=50.22 E-value=31 Score=30.40 Aligned_cols=54 Identities=11% Similarity=0.171 Sum_probs=46.3
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
.|++.|.+||.++... .-+|...+++..+++...+...+++|.+.|++.+....
T Consensus 24 ~ld~~d~~IL~~L~~~----~~~s~~eLA~~lglS~~tv~~rl~~L~~~G~I~~~~a~ 77 (171)
T 2e1c_A 24 PLDEIDKKIIKILQND----GKAPLREISKITGLAESTIHERIRKLRESGVIKKFTAI 77 (171)
T ss_dssp CCCHHHHHHHHHHHHC----TTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCCCCCC
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeeeEE
Confidence 5899999999999864 24788899999999999999999999999999765443
No 355
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=49.44 E-value=12 Score=32.32 Aligned_cols=59 Identities=10% Similarity=0.035 Sum_probs=44.5
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG 70 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g 70 (472)
.|+..+|.||..|...- .+-+....++...+++...+...+..|.+.|||.+...+-|+
T Consensus 43 glt~~q~~vL~~l~~~~--~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~Dr 101 (168)
T 3u2r_A 43 ELSAQQYNTLRLLRSVH--PEGMATLQIADRLISRAPDITRLIDRLDDRGLVLRTRKPENR 101 (168)
T ss_dssp TCCHHHHHHHHHHHHHT--TSCEEHHHHHHHC---CTHHHHHHHHHHHTTSEEEEEETTEE
T ss_pred CCCHHHHHHHHHHHhcC--CCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEeecCCCCCC
Confidence 58999999999887641 134677788888899999999999999999999876655443
No 356
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=48.36 E-value=20 Score=29.62 Aligned_cols=53 Identities=25% Similarity=0.231 Sum_probs=44.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSS 66 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~ 66 (472)
.|++.+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...
T Consensus 34 ~l~~~~~~iL~~l~~~----~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~ 86 (142)
T 2bv6_A 34 NLTYPQFLVLTILWDE----SPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERS 86 (142)
T ss_dssp TCCHHHHHHHHHHHHS----SEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEEC
T ss_pred CCCHHHHHHHHHHHHc----CCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecC
Confidence 5899999999999764 2367778888889999999999999999999876543
No 357
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=48.17 E-value=7.9 Score=30.56 Aligned_cols=74 Identities=12% Similarity=0.147 Sum_probs=53.5
Q ss_pred ccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc-CCCccCcccccccccHHH
Q 012042 9 RYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD-SSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 9 ~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~-~~~y~gy~lt~~g~d~~a 82 (472)
-.|+...+.||.++-.......-+....+++..+++...+...+..|.+.|+|... ......+.+|..|..++.
T Consensus 8 ~~l~~~~~~iL~~l~~~~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~~~~d~R~~~v~LT~~G~~~~~ 82 (95)
T 2qvo_A 8 LLFKEKALEILMTIYYESLGGNDVYIQYIASKVNSPHSYVWLIIKKFEEAKMVECELEGRTKIIRLTDKGQKIAQ 82 (95)
T ss_dssp HHSCHHHHHHHHHHHHHHHTTCCEEHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHH
T ss_pred cCCchhHHHHHHHHHHccCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCcCccCCCCCCeEEEEEChhHHHHHH
Confidence 35788888888877543222234677888899999999999999999999999322 122345788877776543
No 358
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=47.70 E-value=8.5 Score=30.02 Aligned_cols=66 Identities=12% Similarity=0.129 Sum_probs=50.0
Q ss_pred ChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC----CCccCcccccccccHH
Q 012042 12 SKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS----SKYDGFRLTYLGYDFL 81 (472)
Q Consensus 12 ~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~----~~y~gy~lt~~g~d~~ 81 (472)
++..++||..+... .-+....+++..+++...++..|+.|.+.|+|.+.. .....|.+|..|...+
T Consensus 15 ~~~~~~iL~~L~~~----~~~~~~ela~~l~is~~tvs~~l~~L~~~gli~~~~~~~~~r~~~~~lt~~g~~~~ 84 (100)
T 1ub9_A 15 NPVRLGIMIFLLPR----RKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEA 84 (100)
T ss_dssp SHHHHHHHHHHHHH----SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHHHH
T ss_pred ChHHHHHHHHHHhc----CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCCcceEEEEECHHHHHHH
Confidence 56788899888543 235677788888999999999999999999998532 3455688887776533
No 359
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=46.43 E-value=20 Score=30.52 Aligned_cols=52 Identities=12% Similarity=0.011 Sum_probs=44.5
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS 65 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~ 65 (472)
.|++.|++||..+... .-++...+++..+++...+...+++|.+.|++.+..
T Consensus 4 ~ld~~~~~iL~~L~~~----~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 55 (150)
T 2w25_A 4 ALDDIDRILVRELAAD----GRATLSELATRAGLSVSAVQSRVRRLESRGVVQGYS 55 (150)
T ss_dssp CCCHHHHHHHHHHHHC----TTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred ccCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEE
Confidence 3889999999998654 347889999999999999999999999999996543
No 360
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=46.24 E-value=23 Score=29.61 Aligned_cols=54 Identities=9% Similarity=0.128 Sum_probs=44.9
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK 67 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~ 67 (472)
.|+..+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...+
T Consensus 37 ~lt~~~~~iL~~l~~~----~~~t~~ela~~l~~~~~~vs~~l~~Le~~Glv~r~~~~ 90 (152)
T 3bj6_A 37 GVTVGQRAILEGLSLT----PGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTNP 90 (152)
T ss_dssp TCCHHHHHHHHHHHHS----TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCS
T ss_pred CCCHHHHHHHHHHHhC----CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeecCCc
Confidence 5899999999999763 23677788888899999999999999999999875543
No 361
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=45.31 E-value=20 Score=30.18 Aligned_cols=53 Identities=13% Similarity=0.060 Sum_probs=42.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSS 66 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~ 66 (472)
.|+..+++||..+... .-+....+++..+++...+...++.|.+.|+|.+...
T Consensus 44 ~l~~~~~~iL~~l~~~----~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~ 96 (153)
T 2pex_A 44 DLTYPQYLVMLVLWET----DERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTRA 96 (153)
T ss_dssp TCCHHHHHHHHHHHHS----CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-
T ss_pred CCCHHHHHHHHHHHhC----CCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCC
Confidence 5889999999998753 3356777788888999999999999999999876543
No 362
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=45.25 E-value=21 Score=30.84 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=44.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS 65 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~ 65 (472)
.|++.|++||..+.... -++...+++..+++...+...++.|.+.|++.+..
T Consensus 7 ~ld~~~~~il~~L~~~~----~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 58 (162)
T 2p5v_A 7 TLDKTDIKILQVLQENG----RLTNVELSERVALSPSPCLRRLKQLEDAGIVRQYA 58 (162)
T ss_dssp CCCHHHHHHHHHHHHCT----TCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHcC----CCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEeeec
Confidence 58899999999987653 26899999999999999999999999999987643
No 363
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=45.05 E-value=37 Score=28.98 Aligned_cols=57 Identities=14% Similarity=0.170 Sum_probs=44.6
Q ss_pred hHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 16 FRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 16 ~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
.|+|..+.... .. +...|++..+++...+.+++..|.+.|||..... -.||+|.-..
T Consensus 12 l~~L~~La~~~--~~--s~~~IA~~~~i~~~~l~kIl~~L~~aGlv~s~rG-~GGy~Lar~p 68 (145)
T 1xd7_A 12 IHILSLISMDE--KT--SSEIIADSVNTNPVVVRRMISLLKKADILTSRAG-VPGASLKKDP 68 (145)
T ss_dssp HHHHHHHHTCS--CC--CHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSS-SSSCEESSCG
T ss_pred HHHHHHHHhCC--CC--CHHHHHHHHCcCHHHHHHHHHHHHHCCceEeecC-CCCceecCCH
Confidence 44555554432 23 8889999999999999999999999999988776 7889887443
No 364
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=43.90 E-value=25 Score=30.03 Aligned_cols=51 Identities=6% Similarity=-0.007 Sum_probs=44.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
.|++.|.+||..+... .-++...+++..+++...+...+++|.+.|++.+.
T Consensus 5 ~ld~~d~~il~~L~~~----~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~ 55 (152)
T 2cg4_A 5 LIDNLDRGILEALMGN----ARTAYAELAKQFGVSPETIHVRVEKMKQAGIITGA 55 (152)
T ss_dssp CCCHHHHHHHHHHHHC----TTSCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEE
T ss_pred ccCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHcCCcceE
Confidence 4788999999998765 34789999999999999999999999999998753
No 365
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=43.00 E-value=24 Score=27.59 Aligned_cols=57 Identities=16% Similarity=0.026 Sum_probs=42.3
Q ss_pred ChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 12 SKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 12 ~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
++..++||..+ .+ . +....+++..+++...+...|+.|.+.|+|.+.. . .|.++..|
T Consensus 30 ~~~r~~Il~~L-~~----~-~~~~eLa~~l~is~~tv~~~L~~L~~~Glv~~~~-g--~y~l~~~g 86 (96)
T 1y0u_A 30 NPVRRKILRML-DK----G-RSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVG-E--RWVVTDAG 86 (96)
T ss_dssp CHHHHHHHHHH-HT----T-CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-T--EEEECTTT
T ss_pred CHHHHHHHHHH-cC----C-CCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEC-C--EEEECCCc
Confidence 45567788887 32 2 4666777777999999999999999999998655 2 67666443
No 366
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=42.90 E-value=19 Score=30.81 Aligned_cols=54 Identities=11% Similarity=0.127 Sum_probs=45.0
Q ss_pred cCChhhhHHHHHHHhh-CCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccc
Q 012042 10 YLSKDDFRVLTAVEMG-MRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHH 63 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~-~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~ 63 (472)
.||..++-+|-.|... .....++.++.++...+++...+...|..|++.|++..
T Consensus 29 gLs~~E~~lLl~L~~~~~~g~~~ps~~~LA~~~~~s~~~v~~~L~~L~~KGlI~i 83 (135)
T 2v79_A 29 GLNETELILLLKIKMHLEKGSYFPTPNQLQEGMSISVEECTNRLRMFIQKGFLFI 83 (135)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCCSCCHHHHHTTSSSCHHHHHHHHHHHHHHTSCEE
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 4899999988766664 33447778889999999999999999999999999876
No 367
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=42.80 E-value=27 Score=29.71 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=45.9
Q ss_pred cCChhhhHHHHHHHhhCC-CCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccH
Q 012042 10 YLSKDDFRVLTAVEMGMR-NHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDF 80 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~-~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~ 80 (472)
.|+...|.||..+..... ...-+....+++..+++...+...+..|.+.|||.. ..+-|+ ..+|..|...
T Consensus 30 gLt~~q~~vL~~l~~~~~~~~~~~t~~eLa~~l~~~~~tvsr~v~~Le~~glVr~-~~~~DrR~~~v~LT~~G~~~ 104 (148)
T 4fx0_A 30 GLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERTTLTRNLEVMRRDGLVRV-MAGADARCKRIELTAKGRAA 104 (148)
T ss_dssp TCCHHHHHHHHHHHC---------CHHHHHHHHTCCHHHHHHHHHHHHHTTSBC------------CCBCHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEe-eCCCCCCeeEEEECHHHHHH
Confidence 589999999999976542 234567788999999999999999999999999954 333332 3455555443
No 368
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=42.72 E-value=27 Score=30.77 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=44.8
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
...|++.|++||..+.... -+|...+++..+++...+...+++|.+.|++.+.
T Consensus 12 ~~~ld~~d~~IL~~L~~~~----~~s~~eLA~~lglS~~tv~~~l~~L~~~G~I~~~ 64 (171)
T 2ia0_A 12 EIHLDDLDRNILRLLKKDA----RLTISELSEQLKKPESTIHFRIKKLQERGVIERY 64 (171)
T ss_dssp --CCCHHHHHHHHHHHHCT----TCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred cCCCCHHHHHHHHHHHHcC----CCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEee
Confidence 3568999999999997653 3799999999999999999999999999998654
No 369
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=42.71 E-value=25 Score=29.88 Aligned_cols=51 Identities=8% Similarity=0.122 Sum_probs=44.5
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
.|++.|.+||..+... .-++...+++..+++...+...+++|.+.|++.+.
T Consensus 6 ~ld~~d~~il~~L~~~----~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~ 56 (151)
T 2dbb_A 6 KLDRVDMQLVKILSEN----SRLTYRELADILNTTRQRIARRIDKLKKLGIIRKF 56 (151)
T ss_dssp CCCHHHHHHHHHHHHC----TTCCHHHHHHHTTSCHHHHHHHHHHHHHHTSEEEE
T ss_pred hCCHHHHHHHHHHHHc----CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 4889999999998865 34799999999999999999999999999998753
No 370
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=39.35 E-value=27 Score=26.44 Aligned_cols=53 Identities=15% Similarity=0.189 Sum_probs=37.1
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhC----CCCchhHHHHHHHHhccccccc
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIAS----LKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~----l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
+..|++.++.||.++-.. .-+....|....+ ++...+...|.+|.+.|+|.+.
T Consensus 4 ~~~lt~~e~~vL~~L~~~----~~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kGlv~r~ 60 (82)
T 1p6r_A 4 IPQISDAELEVMKVIWKH----SSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHH 60 (82)
T ss_dssp CCCCCHHHHHHHHHHHTS----SSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred cCCCCHHHHHHHHHHHcC----CCCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCCCeEEE
Confidence 457899999999999762 2234444444332 5667888889998888887654
No 371
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=38.94 E-value=68 Score=25.10 Aligned_cols=63 Identities=13% Similarity=0.040 Sum_probs=46.2
Q ss_pred ChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc-CCCccCccccccccc
Q 012042 12 SKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD-SSKYDGFRLTYLGYD 79 (472)
Q Consensus 12 ~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~-~~~y~gy~lt~~g~d 79 (472)
++..++||..+..+ + +....+++..+++...++..|+.|.+.|+|... .....-|.++..+..
T Consensus 22 ~~~r~~Il~~L~~~----~-~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~g~~~~y~l~~~~~~ 85 (102)
T 3pqk_A 22 HPVRLMLVCTLVEG----E-FSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAA 85 (102)
T ss_dssp SHHHHHHHHHHHTC----C-BCHHHHHHHHTCCTTHHHHHHHHHHHTTSEEEECSSSCCEEEECSSTHH
T ss_pred CHHHHHHHHHHHhC----C-CCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEECcHHHH
Confidence 45566777777532 2 566677777799999999999999999999754 344566888766543
No 372
>2bcx_B Ryanodine receptor 1; EF-hand, type-2 turn, calcium binding protein; 2.00A {Gallus gallus}
Probab=38.81 E-value=30 Score=22.05 Aligned_cols=18 Identities=56% Similarity=0.551 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 012042 422 AELMKRIEKQRRRAVSAV 439 (472)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~ 439 (472)
+.-.|-+.+|||||+-|-
T Consensus 5 ~~w~~~~s~qRKRaVvac 22 (30)
T 2bcx_B 5 AVWHKLLSKQRRRAVVAC 22 (30)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhHHHHHHHHHH
Confidence 456678999999998764
No 373
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=38.64 E-value=25 Score=31.84 Aligned_cols=68 Identities=13% Similarity=0.102 Sum_probs=51.3
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCcc----CcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYD----GFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~----gy~lt~~g~d~~ 81 (472)
.|++.+|+||..+... .-+....++...+++...+...+.+|.+.|||.+...+-| .+.+|..|...+
T Consensus 45 gLt~~q~~iL~~L~~~----~~~t~~eLa~~l~i~~stvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~ 116 (207)
T 2fxa_A 45 DLNINEHHILWIAYQL----NGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVF 116 (207)
T ss_dssp TCCHHHHHHHHHHHHH----TSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC------CEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC----CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCceEEEEECHHHHHHH
Confidence 5899999999999764 2367778888899999999999999999999987665433 344555555444
No 374
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=37.98 E-value=15 Score=42.24 Aligned_cols=25 Identities=28% Similarity=0.417 Sum_probs=23.3
Q ss_pred ccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 225 CDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 225 rDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
||=+|+||||+.+|.+.=||||.+-
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred CCCCCccEEEecCCCEEEEeehhhh
Confidence 7999999999999999999999874
No 375
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=37.35 E-value=13 Score=42.10 Aligned_cols=25 Identities=32% Similarity=0.442 Sum_probs=23.1
Q ss_pred ccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 225 CDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 225 rDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
||=+|+||||+.+|.+.=||||.+-
T Consensus 788 gDRH~~NILid~tG~v~HIDFG~~f 812 (940)
T 2wxf_A 788 GDRHSDNIMIRESGQLFHIDFGHFL 812 (940)
T ss_dssp CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred CCCCcccEEEecCCCEEEEeehhhh
Confidence 7999999999999999999999863
No 376
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=37.26 E-value=29 Score=28.09 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=45.8
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHh-CCCCchhHHHHHHHHhcccccccCCC----ccCcccccccccHH
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIA-SLKHGGTYKVLKNLLRYKLLHHDSSK----YDGFRLTYLGYDFL 81 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a-~l~~~~~~~~l~~L~k~~lv~~~~~~----y~gy~lt~~g~d~~ 81 (472)
.++||..+..+ -+....+.+.. +++...+...|+.|.+.|||.+...+ ...|.+|..|...+
T Consensus 24 ~~~IL~~L~~~-----~~~~~eLa~~l~~is~~tvs~~L~~Le~~GlI~r~~~~~d~r~~~~~LT~~G~~~~ 90 (112)
T 1z7u_A 24 KLSLMDELFQG-----TKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPEGYALY 90 (112)
T ss_dssp HHHHHHHHHHS-----CBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-----CCCHHHHHHHhccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECHhHHHHH
Confidence 45678877633 24566666666 99999999999999999999876533 34588888886544
No 377
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=36.00 E-value=15 Score=41.86 Aligned_cols=25 Identities=32% Similarity=0.458 Sum_probs=22.8
Q ss_pred ccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 225 CDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 225 rDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
||=+|+||||+.+|.+.=||||.+-
T Consensus 804 gDRH~~NILid~tG~v~HIDFG~~f 828 (961)
T 1e7u_A 804 GDRHNDNIMISETGNLFHIDFGHIL 828 (961)
T ss_dssp CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred cCCCCcceEEecCCCEEEEeehhhh
Confidence 7889999999999999999999874
No 378
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=35.44 E-value=40 Score=27.02 Aligned_cols=62 Identities=10% Similarity=0.095 Sum_probs=44.7
Q ss_pred hHHHHHHHhhCCCCCCCCHHHHHHHh-CCCCchhHHHHHHHHhcccccccCC----CccCcccccccccHHH
Q 012042 16 FRVLTAVEMGMRNHEIVPSELVHRIA-SLKHGGTYKVLKNLLRYKLLHHDSS----KYDGFRLTYLGYDFLA 82 (472)
Q Consensus 16 ~rvL~~ie~~~~~~e~Vp~~~i~~~a-~l~~~~~~~~l~~L~k~~lv~~~~~----~y~gy~lt~~g~d~~a 82 (472)
++||..+. +.. .....+.+.. +++...+...|+.|.+.|||.+... ....|.+|..|-..+.
T Consensus 17 ~~IL~~L~----~~~-~~~~eLa~~l~~is~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y~LT~~G~~l~~ 83 (107)
T 2hzt_A 17 XVILXHLT----HGK-KRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLEG 83 (107)
T ss_dssp HHHHHHHT----TCC-BCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGHH
T ss_pred HHHHHHHH----hCC-CCHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECccHHHHHH
Confidence 45777763 222 3455555555 9999999999999999999987643 3456899988876443
No 379
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=34.47 E-value=38 Score=26.05 Aligned_cols=64 Identities=11% Similarity=0.094 Sum_probs=46.5
Q ss_pred ChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC-CCccCccccccccc
Q 012042 12 SKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS-SKYDGFRLTYLGYD 79 (472)
Q Consensus 12 ~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~-~~y~gy~lt~~g~d 79 (472)
++..++||.++.. +.-+....+++..+++...+...|+.|.+.|++.+.. ..+.-|.++..|..
T Consensus 23 ~~~~~~il~~l~~----~~~~s~~ela~~l~is~~tvs~~l~~L~~~glv~~~~~~r~~~y~l~~~~~~ 87 (99)
T 3cuo_A 23 HPKRLLILCMLSG----SPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVN 87 (99)
T ss_dssp SHHHHHHHHHHTT----CCSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSCEEEEECCHHHH
T ss_pred ChHHHHHHHHHHh----CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCEEEEEEChHHHH
Confidence 4567778877743 3345677788888999999999999999999997643 33445777755543
No 380
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=34.11 E-value=41 Score=30.90 Aligned_cols=64 Identities=17% Similarity=0.269 Sum_probs=51.6
Q ss_pred CChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHH
Q 012042 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 11 l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~a 82 (472)
.+.+|+ |.+|... ..-|....+++..+++...+...+++|.+.||+.+.. .|..+|-.|.....
T Consensus 15 ~s~EdY--Lk~I~~L---~~~V~~~~LA~~LgvS~~SV~~~lkkL~e~GLV~~~~---~Gv~LTe~G~~~A~ 78 (200)
T 2p8t_A 15 YTVEDV--LAVIFLL---KEPLGRKQISERLELGEGSVRTLLRKLSHLDIIRSKQ---RGHFLTLKGKEIRD 78 (200)
T ss_dssp CCHHHH--HHHHHHT---TSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC-----CEEECHHHHHHHH
T ss_pred CCHHHH--HHHHHHH---cCCccHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeC---CCeEECHHHHHHHH
Confidence 344555 7777776 2568999999999999999999999999999998876 69999999987654
No 381
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=33.85 E-value=28 Score=28.36 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=38.8
Q ss_pred HHHHHHHh-CCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHH
Q 012042 34 SELVHRIA-SLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 34 ~~~i~~~a-~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~a 82 (472)
+..+.+.. +++...+...|+.|.+.|||.+....-.-|.+|..|.....
T Consensus 45 ~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~r~~~y~LT~~G~~l~~ 94 (111)
T 3df8_A 45 FNDIRSSIPGISSTILSRRIKDLIDSGLVERRSGQITTYALTEKGMNVRN 94 (111)
T ss_dssp HHHHHHTSTTCCHHHHHHHHHHHHHTTSEEEEESSSEEEEECHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHCCCEEEeecCcEEEEECccHHHHHH
Confidence 55555555 89999999999999999999876445567899988876553
No 382
>2obp_A Putative DNA-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Ralstonia eutropha} SCOP: a.4.5.71
Probab=33.63 E-value=60 Score=26.18 Aligned_cols=56 Identities=14% Similarity=0.005 Sum_probs=44.9
Q ss_pred cCChhhhHHHHHHHhhCC---CCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCC
Q 012042 10 YLSKDDFRVLTAVEMGMR---NHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSS 66 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~---~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~ 66 (472)
.|++-.|.+|..+-.... ...| .+..+++...++.+.+.+.+..|.+.|||.....
T Consensus 13 gl~~~q~~vL~~L~~~~~~~~g~~~-s~~eLa~~l~l~~stLsR~l~rLe~~GLV~r~~~ 71 (96)
T 2obp_A 13 GIDPAIVEVLLVLREAGIENGATPW-SLPKIAKRAQLPMSVLRRVLTQLQAAGLADVSVE 71 (96)
T ss_dssp CCCHHHHHHHHHHHHHTSSTTCCCC-BHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHhhCCCCCc-CHHHHHHHhCCchhhHHHHHHHHHHCCCEEeecC
Confidence 488999999987765522 2344 7778899999999999999999999999987443
No 383
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=33.58 E-value=36 Score=27.09 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=49.2
Q ss_pred hhccCC-hhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC-CCccCccccccccc
Q 012042 7 VLRYLS-KDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS-SKYDGFRLTYLGYD 79 (472)
Q Consensus 7 ~~~~l~-~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~-~~y~gy~lt~~g~d 79 (472)
.+..+. +..++||..+..+ . +....+++..+++...+...|+.|.+.|+|.+.. ....-|.+|..|..
T Consensus 14 ~~~~l~~~~r~~IL~~L~~~----~-~~~~ela~~l~is~~tv~~~l~~L~~~gli~~~~~gr~~~y~l~~~~~~ 83 (114)
T 2oqg_A 14 VFAALSDETRWEILTELGRA----D-QSASSLATRLPVSRQAIAKHLNALQACGLVESVKVGREIRYRALGAELN 83 (114)
T ss_dssp HHHHTTCHHHHHHHHHHHHS----C-BCHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECSHHHH
T ss_pred HHHHhCChHHHHHHHHHHcC----C-CCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeEEecCCEEEEEechHHHH
Confidence 344444 5678899888432 2 5777888888999999999999999999997642 33444777766654
No 384
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=32.80 E-value=43 Score=28.10 Aligned_cols=54 Identities=22% Similarity=0.142 Sum_probs=38.0
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhC----CCCchhHHHHHHHHhccccccc
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIAS----LKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~----l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
+..|++.++.||.++-.. ++-+....|..... +....+...|.+|.+.|+|.+.
T Consensus 4 ~~~lt~~e~~vL~~L~~~---~~~~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~r~ 61 (138)
T 2g9w_A 4 LTRLGDLERAVMDHLWSR---TEPQTVRQVHEALSARRDLAYTTVMAVLQRLAKKNLVLQI 61 (138)
T ss_dssp GGGCCHHHHHHHHHHHTC---SSCEEHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred cccCCHHHHHHHHHHHhc---CCCCCHHHHHHHHhccCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 467999999999998753 23345555555544 6667888888888888777543
No 385
>2pg4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, DNA binding protein; HET: MSE CIT; 2.21A {Aeropyrum pernix} SCOP: a.4.5.48
Probab=32.75 E-value=18 Score=28.22 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=46.4
Q ss_pred HHHHHHHhhCCCCCCCCHHHHHHHhCCCCch-hHHHHHHHHhccccccc--CCCccCcccccccccHHH
Q 012042 17 RVLTAVEMGMRNHEIVPSELVHRIASLKHGG-TYKVLKNLLRYKLLHHD--SSKYDGFRLTYLGYDFLA 82 (472)
Q Consensus 17 rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~-~~~~l~~L~k~~lv~~~--~~~y~gy~lt~~g~d~~a 82 (472)
|+|..+.....+..-+....+++..+++... +...++.|.+.|+|... ...+..+.+|..|...+.
T Consensus 16 ~~l~~L~~l~~~~~~~t~~eLa~~l~is~~t~vs~~l~~Le~~Glv~~~~~drR~~~~~LT~~G~~~~~ 84 (95)
T 2pg4_A 16 RILPTLLEFEKKGYEPSLAEIVKASGVSEKTFFMGLKDRLIRAGLVKEETLSYRVKTLKLTEKGRRLAE 84 (95)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHCCCHHHHHTTHHHHHHHTTSEEEEEEETTEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHCCCchHHHHHHHHHHHHCCCeecCCCCCCeEEEEECHhHHHHHH
Confidence 4444443333333246788888888999999 99999999999999832 234667788887876553
No 386
>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36
Probab=32.41 E-value=55 Score=26.83 Aligned_cols=54 Identities=13% Similarity=0.055 Sum_probs=44.1
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCC
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSS 66 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~ 66 (472)
.+++..+++|..+... + .-+....+++..+++.+.+...++.|.+.|+|.+...
T Consensus 23 gl~~~~~~il~~L~~~--~-~~~t~~ela~~l~~~~stvs~~l~~L~~~G~v~r~~~ 76 (152)
T 1ku9_A 23 GLNKSVGAVYAILYLS--D-KPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWI 76 (152)
T ss_dssp TCCHHHHHHHHHHHHC--S-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECC
T ss_pred CCChhHHHHHHHHHHc--C-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEec
Confidence 5889999999998432 2 3367778888899999999999999999999877543
No 387
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=31.55 E-value=36 Score=27.49 Aligned_cols=66 Identities=17% Similarity=0.236 Sum_probs=51.8
Q ss_pred ccCChhhhHHHHHHHhhCCCCCCCCHHHHHH-HhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHH
Q 012042 9 RYLSKDDFRVLTAVEMGMRNHEIVPSELVHR-IASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFL 81 (472)
Q Consensus 9 ~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~-~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~ 81 (472)
-.|+.-+|-+|.+|... .++....++. ...+..+.+...++.|.+.|+|. .+. ++..+|..|-+.+
T Consensus 12 ~~L~~~QfsiL~~L~~~----~~~t~~~Lae~~l~~drstvsrnl~~L~r~GlVe--~~~-~Dl~LT~~G~~~l 78 (95)
T 1bja_A 12 DVLNEKTATILITIAKK----DFITAAEVREVHPDLGNAVVNSNIGVLIKKGLVE--KSG-DGLIITGEAQDII 78 (95)
T ss_dssp TSSCHHHHHHHHHHHHS----TTBCHHHHHHTCTTSCHHHHHHHHHHHHTTTSEE--EET-TEEEECHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHC----CCCCHHHHHHHHhcccHHHHHHHHHHHHHCCCee--cCC-CCeeeCHhHHHHH
Confidence 36889999999999654 3778888888 78898889999999999999998 212 2377887776655
No 388
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=31.24 E-value=27 Score=32.88 Aligned_cols=57 Identities=12% Similarity=0.128 Sum_probs=43.0
Q ss_pred HHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccc
Q 012042 17 RVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTY 75 (472)
Q Consensus 17 rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~ 75 (472)
|.|..++.-.....-+....|.+..+++...++..|..|.+.|++.+.... .|+++.
T Consensus 24 r~l~iL~~l~~~~~~~~~~eia~~~gl~kstv~r~l~tL~~~G~v~~~~~~--~Y~lg~ 80 (260)
T 2o0y_A 24 RVIDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATMCARSVLTSRADG--SYSLGP 80 (260)
T ss_dssp HHHHHHTTCBTTBSSBCHHHHHHHHCCCHHHHHHHHHHHHHTTSEEECTTS--CEEECH
T ss_pred HHHHHHHHHhhCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCCC--eEEecH
Confidence 444555544434455788899999999999999999999999999886533 677653
No 389
>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A
Probab=30.82 E-value=29 Score=28.13 Aligned_cols=53 Identities=8% Similarity=0.129 Sum_probs=37.7
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhC----CCCchhHHHHHHHHhccccccc
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIAS----LKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~----l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
+..|++.++.||.++... .-+....|....+ ++...+...|.+|.+.|+|.+.
T Consensus 5 ~~~lt~~~~~vL~~l~~~----~~~t~~ela~~l~~~~~~s~~tv~~~l~~L~~~Glv~r~ 61 (123)
T 1okr_A 5 TYEISSAEWEVMNIIWMK----KYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRK 61 (123)
T ss_dssp CCCCCHHHHHHHHHHHHH----SSEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTSEEEE
T ss_pred cccCCHHHHHHHHHHHhC----CCcCHHHHHHHHhccCCCcHhhHHHHHHHHHHCCCeEEE
Confidence 457999999999999763 2245555555555 6677888888888888777543
No 390
>1fx7_A Iron-dependent repressor IDER; DTXR, iron-dependent regulator, signaling protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.4.5.24 a.76.1.1 b.34.1.2 PDB: 1u8r_A
Probab=30.06 E-value=29 Score=32.03 Aligned_cols=68 Identities=13% Similarity=0.018 Sum_probs=49.7
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCH--HHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPS--ELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~--~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~ 81 (472)
.||+..+.+|.++...... . ++. ..+++..+++...+...+++|.+.|||.+... .++.+|..|....
T Consensus 3 ~lt~~~e~~L~~L~~l~~~-~-~~~~~~~La~~l~vs~~tvs~~l~~Le~~GlV~r~~~--~~v~LT~~G~~~~ 72 (230)
T 1fx7_A 3 ELVDTTEMYLRTIYDLEEE-G-VTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGD--RHLELTEKGRALA 72 (230)
T ss_dssp TTSSHHHHHHHHHHHHHHH-T-SCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECTT--SCEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhc-C-CCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC--ccEEECHHHHHHH
Confidence 5777777778777543221 2 344 66777788999999999999999999987653 4777887776644
No 391
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=29.05 E-value=48 Score=31.25 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=53.8
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~~ 81 (472)
.|+..+|.||..+...- ..-+....++...+++...+...+.+|.+.|+|.+...+-|+ ..+|..|...+
T Consensus 155 gLt~~q~~vL~~L~~~~--~~~~t~~eLa~~l~i~~~tvt~~v~rLe~~GlV~R~~~~~DrR~~~i~LT~~G~~~~ 228 (250)
T 1p4x_A 155 TLSFVEFTILAIITSQN--KNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHA 228 (250)
T ss_dssp SSCHHHHHHHHHHHTTT--TCCEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECCHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCC--CCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeeCCCCCCCeEEEEECHHHHHHH
Confidence 58999999999986431 123677788999999999999999999999999987666543 34565665543
No 392
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=28.53 E-value=30 Score=32.33 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=43.2
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccc
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYL 76 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~ 76 (472)
-++||.++.. ...-+....|.+..+++...++..|+.|.+.|++.+. ....|+++..
T Consensus 10 ~l~iL~~l~~---~~~~~~~~ela~~~gl~~stv~r~l~~L~~~G~v~~~--~~~~Y~lg~~ 66 (249)
T 1mkm_A 10 AFEILDFIVK---NPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRK--KDKRYVPGYK 66 (249)
T ss_dssp HHHHHHHHHH---CSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEC--TTSCEEECTH
T ss_pred HHHHHHHHHh---CCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEC--CCCcEEECHH
Confidence 4566666643 2334678889999999999999999999999999886 3346776644
No 393
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=28.51 E-value=28 Score=40.08 Aligned_cols=25 Identities=36% Similarity=0.555 Sum_probs=23.1
Q ss_pred ccCCCCcEEEcCCCcEEEEeCCCce
Q 012042 225 CDFNEFNIMIDDDEKVTMIDFPQMV 249 (472)
Q Consensus 225 rDLKP~NILl~~~g~vkIIDFG~A~ 249 (472)
||=+++||||+.+|.+.=||||.+-
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred cCCCCcceEEeCCCCEEEEeehhhh
Confidence 7889999999999999999999874
No 394
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=27.49 E-value=82 Score=29.84 Aligned_cols=98 Identities=15% Similarity=0.102 Sum_probs=56.1
Q ss_pred hHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHHHHHHHHh--CCce-
Q 012042 16 FRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKTLVN--RGVF- 92 (472)
Q Consensus 16 ~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~al~~l~~--~~~i- 92 (472)
++||.++.. ...-+....|.+..+++.+.++..|..|...|++.+... ..|++. ..++.+-.... ..+.
T Consensus 33 l~IL~~l~~---~~~~ltl~eia~~lgl~ksTv~RlL~tL~~~G~v~~~~~--~~Y~LG---~~~~~lg~~~~~~~~l~~ 104 (275)
T 3mq0_A 33 VRILDLVAG---SPRDLTAAELTRFLDLPKSSAHGLLAVMTELDLLARSAD--GTLRIG---PHSLRWANGFLSHLDIVS 104 (275)
T ss_dssp HHHHHHHHH---CSSCEEHHHHHHHHTCC--CHHHHHHHHHHTTSEEECTT--SEEEEC---THHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHhh---CCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCC--CcEEeh---HHHHHHHHHHHhcCCHHH
Confidence 445555544 334467888999999999999999999999999988753 347655 33333332221 1111
Q ss_pred --eeecceecccCceeEEEEEeCCCCEEEEE
Q 012042 93 --TAVGRQLGVGKESDIFEVAREDGTVLAMK 121 (472)
Q Consensus 93 --~~i~~~IG~G~fg~VY~a~~~~g~~VAVK 121 (472)
..+...|..-.--.|+++....+..+.|-
T Consensus 105 ~a~p~l~~L~~~~~etv~L~v~~g~~~v~i~ 135 (275)
T 3mq0_A 105 TFNDHLAQRHDLDPYTVTLTVREGGEVVYIG 135 (275)
T ss_dssp HHHHHHHTCGGGTTSEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHCCEEEEEEEECCEEEEEE
Confidence 11112233333345788876544444443
No 395
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=26.74 E-value=30 Score=32.16 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=41.2
Q ss_pred hHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccc
Q 012042 16 FRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYL 76 (472)
Q Consensus 16 ~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~ 76 (472)
++||.++.. ...-+....|.+..+++...++..|..|.+.|++.+... -..|+++..
T Consensus 9 l~iL~~l~~---~~~~~s~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~-~~~Y~lg~~ 65 (241)
T 2xrn_A 9 ASIMRALGS---HPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGP-AGGFRLGPA 65 (241)
T ss_dssp HHHHHHHHT---CTTCEEHHHHHHHTTSCHHHHHHHHHHHHTTTSEEECGG-GCEEEECSH
T ss_pred HHHHHHHHh---CCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC-CCeEEECHH
Confidence 455555542 333467788999999999999999999999999987532 234666543
No 396
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=26.03 E-value=62 Score=30.22 Aligned_cols=58 Identities=12% Similarity=0.007 Sum_probs=44.3
Q ss_pred HHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCccccccc
Q 012042 17 RVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLG 77 (472)
Q Consensus 17 rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g 77 (472)
|.|..++.-.....-+....|.+..+++...++..|..|.+.|++.+.. ..|+++...
T Consensus 15 r~l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~~L~~~G~v~~~~---~~Y~Lg~~~ 72 (257)
T 2g7u_A 15 RGFAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGSG---GRWSLTPRV 72 (257)
T ss_dssp HHHHHHHTCSSSCSSCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET---TEEEECGGG
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeCC---CEEEEcHHH
Confidence 4555555555445567888899999999999999999999999998863 457666443
No 397
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=24.19 E-value=79 Score=24.33 Aligned_cols=55 Identities=20% Similarity=0.174 Sum_probs=43.2
Q ss_pred hccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccC
Q 012042 8 LRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDS 65 (472)
Q Consensus 8 ~~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~ 65 (472)
...|++..+++|..+-.. +.-+....+++..+++...+...+..|.+.|++.+..
T Consensus 16 ~~~l~~~~~~~l~~l~~~---~~~~t~~ela~~l~is~~tv~~~l~~L~~~g~v~~~~ 70 (109)
T 2d1h_A 16 CYKITDTDVAVLLKMVEI---EKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTK 70 (109)
T ss_dssp HHTCCHHHHHHHHHHHHH---CSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred hhcCCHHHHHHHHHHHHc---CCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeec
Confidence 357889999888766532 3346777888889999999999999999998886643
No 398
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=23.44 E-value=1.1e+02 Score=23.24 Aligned_cols=51 Identities=14% Similarity=0.092 Sum_probs=41.2
Q ss_pred hhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhccccccc
Q 012042 13 KDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHD 64 (472)
Q Consensus 13 ~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~ 64 (472)
..+.+||.++..... .+-++...|++..+++...+...|.+|.+.|+|.+.
T Consensus 14 ~~~~~IL~~L~~~~~-~~~~t~~eLA~~Lgvs~~tV~~~L~~L~~~G~I~~~ 64 (77)
T 1qgp_A 14 DQEQRILKFLEELGE-GKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKE 64 (77)
T ss_dssp HHHHHHHHHHHHHCS-SSCEEHHHHHHHHCCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHHcCC-CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEec
Confidence 346889988887642 445788888999999999999999999999988664
No 399
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=22.76 E-value=20 Score=29.70 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=46.1
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHh-----CCCCchhHHHHHHHHhcccccccCCC------ccCcccccccccHHHH
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIA-----SLKHGGTYKVLKNLLRYKLLHHDSSK------YDGFRLTYLGYDFLAI 83 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a-----~l~~~~~~~~l~~L~k~~lv~~~~~~------y~gy~lt~~g~d~~al 83 (472)
++-||..+..+. .-..+++..+. .++.+.++..|.+|.+.|+|...... -.=|.+|-.|-..+.-
T Consensus 15 ~~~IL~lL~~~p----~~Gyei~~~l~~~g~~~is~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~lT~~G~~~l~~ 90 (116)
T 3hhh_A 15 EGLVLAIIQRKE----TYGYEITKILNDQGFTEIVEGTVYTILLRLEKNQWVIAEKKPSEKGPMRKFYRLTSSGEAELAD 90 (116)
T ss_dssp HHHHHHHHHHSC----BCHHHHHHHHHTTSCSSCCHHHHHHHHHHHHHTTSEEEEEEECC--CEEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHhcCC----CCHHHHHHHHHHcCCCCCCccHHHHHHHHHHHCCCEEEEeeecCCCCCceEEEECHHHHHHHHH
Confidence 456777776542 22457777775 68888999999999999999865321 1238899888776653
No 400
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=22.49 E-value=73 Score=25.67 Aligned_cols=51 Identities=8% Similarity=0.134 Sum_probs=33.8
Q ss_pred ccCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhC----CCCchhHHHHHHHHhcccccc
Q 012042 9 RYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIAS----LKHGGTYKVLKNLLRYKLLHH 63 (472)
Q Consensus 9 ~~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~----l~~~~~~~~l~~L~k~~lv~~ 63 (472)
..||+.+|.||.++-.. .. +....|.+..+ +....+...+.+|.+.|+|.+
T Consensus 6 ~~Lt~~q~~vL~~L~~~---~~-~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~R 60 (126)
T 1sd4_A 6 VEISMAEWDVMNIIWDK---KS-VSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKR 60 (126)
T ss_dssp CCCCHHHHHHHHHHHHS---SS-EEHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCCHHHHHHHHHHHhc---CC-CCHHHHHHHHhhcCCCChhhHHHHHHHHHHCCceEE
Confidence 46899999999998763 22 44444444443 455677777777777766643
No 401
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, ACT DNA-binding, ferrous iron, transcription; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=22.03 E-value=35 Score=31.41 Aligned_cols=68 Identities=12% Similarity=-0.023 Sum_probs=49.0
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCH--HHHHHHhCCCCchhHHHHHHHHhcccccccCCCccCcccccccccHH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPS--ELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFL 81 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~--~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~gy~lt~~g~d~~ 81 (472)
.||+....+|.+|...... -++. ..+++..+++...+...+++|.+.|||.+.. +.++.+|-.|....
T Consensus 3 ~lt~~~e~yL~~i~~l~~~--~~~~~~~~la~~l~vs~~tvs~~l~~Le~~GlV~r~~--~~~v~LT~~G~~~~ 72 (226)
T 2qq9_A 3 DLVATTEMYLRTIYELEEE--GVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVAS--DRSLQMTPTGRTLA 72 (226)
T ss_dssp CHHHHHHHHHHHHHHHHHH--TCCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECT--TSBEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhc--CCCccHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeC--CCCeEECHHHHHHH
Confidence 3566667778777654322 2333 6788889999999999999999999998754 35677887776543
No 402
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=21.63 E-value=24 Score=29.07 Aligned_cols=65 Identities=15% Similarity=0.277 Sum_probs=45.5
Q ss_pred hhhHHHHHHHhhCCCCCCCCHHHHHHHh-------CCCCchhHHHHHHHHhcccccccCC------CccCcccccccccH
Q 012042 14 DDFRVLTAVEMGMRNHEIVPSELVHRIA-------SLKHGGTYKVLKNLLRYKLLHHDSS------KYDGFRLTYLGYDF 80 (472)
Q Consensus 14 ~d~rvL~~ie~~~~~~e~Vp~~~i~~~a-------~l~~~~~~~~l~~L~k~~lv~~~~~------~y~gy~lt~~g~d~ 80 (472)
-++-||..+..+. .=+.+++..+. .++.+.++..|.+|.+.|+|..... +-.-|.+|-.|-..
T Consensus 13 l~~~IL~~L~~~~----~~Gyei~~~l~~~~~~~~~i~~gtly~~L~rLe~~GlI~~~~~~~~~~~~rk~Y~LT~~G~~~ 88 (116)
T 3f8b_A 13 TNVILLNVLKQGD----NYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYRLTEIGHEN 88 (116)
T ss_dssp HHHHHHHHHHHCC----BCHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHHTTSEEEEEEC----CCEEEEEECHHHHHH
T ss_pred HHHHHHHHHHhCC----CCHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHCCCEEEEeeccCCCCCceEEEECHHHHHH
Confidence 3566788777542 22456666664 5778899999999999999986532 12238899888776
Q ss_pred HH
Q 012042 81 LA 82 (472)
Q Consensus 81 ~a 82 (472)
+.
T Consensus 89 l~ 90 (116)
T 3f8b_A 89 MR 90 (116)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 403
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=20.81 E-value=68 Score=32.49 Aligned_cols=69 Identities=19% Similarity=0.148 Sum_probs=53.2
Q ss_pred cCChhhhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCCccC----cccccccccH
Q 012042 10 YLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG----FRLTYLGYDF 80 (472)
Q Consensus 10 ~l~~~d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~y~g----y~lt~~g~d~ 80 (472)
.||..+|+||..+... ..+-+....+.+...+....+...|.+|.+.|||.+...+-|. ..||-.|...
T Consensus 401 ~lt~~q~~vl~~l~~~--~~~~~~~~~l~~~~~~~~~~~t~~~~~le~~g~v~r~~~~~D~R~~~i~lT~~g~~~ 473 (487)
T 1hsj_A 401 NLNYEEIYILNHILRS--ESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKAN 473 (487)
T ss_dssp CCCHHHHHHHHHHHTC--SCSEEEHHHHHHSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCSSHHHH
T ss_pred CCCHHHHHHHHHHHhC--CCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCCCCCeEEEEECHHHHHH
Confidence 4899999999998542 1144688889999999999999999999999999987655443 3456666553
No 404
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=20.51 E-value=77 Score=26.95 Aligned_cols=62 Identities=15% Similarity=0.128 Sum_probs=44.2
Q ss_pred hhHHHHHHHhhCCCCCCCCHHHHHHHhCCCCchhHHHHHHHHhcccccccCCC---ccCcccccccccHH
Q 012042 15 DFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSK---YDGFRLTYLGYDFL 81 (472)
Q Consensus 15 d~rvL~~ie~~~~~~e~Vp~~~i~~~a~l~~~~~~~~l~~L~k~~lv~~~~~~---y~gy~lt~~g~d~~ 81 (472)
.+.||..+..+ . ..+..+.+..+++...+...|+.|.+.|||.+...+ ...|.+|..|.+.+
T Consensus 26 ~l~IL~~L~~g----~-~~~~eLa~~lgis~~tls~~L~~Le~~GlI~r~~~~~d~~~~y~LT~~G~~l~ 90 (146)
T 2f2e_A 26 SMLIVRDAFEG----L-TRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLTDKGRALF 90 (146)
T ss_dssp HHHHHHHHHTT----C-CSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEECHHHHTTH
T ss_pred HHHHHHHHHhC----C-CCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEEecCCCCeEEEEECchHHHHH
Confidence 34466666433 2 345555555699999999999999999999875422 45789998887643
Done!